mRNA_P-wetherbeei_contig9452.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: A0A8J2WE21_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WE21_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.280e-20 Identity = 57/133 (42.86%), Postives = 85/133 (63.91%), Query Frame = 1 Query: 13 ESSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAY--QDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFGELVC 405 +SS N++ + A+I++ AT NW+V LVTT+ TLA++V GW +NV+ESI ++IA G++VDYV+H+ HAY QD R++ ++ +MG+SV SG +TT GA L C+L WF FG +C Sbjct: 900 DSSRINIVTAFAFALIIMLCATANWIVTLIAFGSLVTTVSTTLALMVFYGWELNVIESIDVSIAGGMAVDYVLHMSHAYNHQDPTLTSSERVRLAMGEMGISVLSGCITTFGACCALFSCDLLWFKMFGYFIC 1032
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: A0A7S1VBT3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VBT3_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.710e-19 Identity = 50/131 (38.17%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 13 ESSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFGELVC 405 +++IQ+ ++ V +A +V+ ++T + F ++ +++ L+ +V++GW + +ESI I I AG SVDYVVH+ HAY+ GD R+ + MG+SV +G++T+VGA L FC L +FAKFG +C Sbjct: 911 QTAIQSSVLGVAIAFVVLLISTRVLHIAFFASLSIISVLISVTGTMVILGWTLGSIESILIGIIAGFSVDYVVHLAHAYKTASGDTYERVTEAFADMGISVLNGMITSVGASIPLFFCQLQFFAKFGTFLC 1041
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: A0A7S0GLU2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLU2_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.230e-18 Identity = 50/131 (38.17%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 13 ESSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFGELVC 405 S++Q+ ++ V +A V+ ++T + + F + +++ LL + +VL+GW + +E+I I+I AG SVDYVVH+ H+Y GD R+Q + ++MG SV +G++T+VGA L FC L +F KFG +C Sbjct: 534 RSAVQSSVLGVFIAFAVLLMSTRVFHIALFATLSIMSVLLSIIGTMVLLGWSLGSIEAILISIVAGFSVDYVVHLAHSYNHSSGDTNERLQSAFSEMGSSVLNGMVTSVGASIPLFFCQLQFFKKFGTFLC 664
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: A0A7S4VPR6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPR6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.130e-18 Identity = 51/130 (39.23%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 16 SSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFGELVC 405 S++ + +I V V+ +V+ +AT + F V + + L+ + + + GW + V+E+I I AG SVDYV+H+ HAY GD + R+ + +MG SV SG+LT+V A L FC LT+FAKFG +C Sbjct: 564 SAVSSSMIGVLVSFVVIFIATRKLHLAFFATVSIFSVLISVIGAVTIAGWTLGVIEAILFGILAGFSVDYVIHLAHAYSHAEGDVEERVMAAYAEMGTSVFSGMLTSVVASIPLFFCTLTFFAKFGTFLC 693
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: A0A7S4RDE7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDE7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.240e-18 Identity = 51/130 (39.23%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 16 SSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFGELVC 405 S++ + +I V V+ +V+ +AT + F V + + L+ + + + GW + V+E+I I AG SVDYV+H+ HAY GD + R+ + +MG SV SG+LT+V A L FC LT+FAKFG +C Sbjct: 896 SAVSSSMIGVLVSFVVIFIATRKLHLAFFATVSIFSVLISVIGAVTIAGWTLGVIEAILFGILAGFSVDYVIHLAHAYSHAEGDVEERVMAAYAEMGTSVFSGMLTSVVASIPLFFCTLTFFAKFGTFLC 1025
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: A0A7S3PW60_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW60_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 8.230e-18 Identity = 53/130 (40.77%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 16 SSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFGELVC 405 ++I +I V VA IV+ ++T + F +C+++ L+ + ++GW + +E+I I+I AG SVDYV+H+ HAY G+ RI + +MGVSV SG+LT+V A L FC LT+FAKFG +C Sbjct: 906 TAISGSMIGVLVAFIVLFVSTRKLHLSLFATLCILSVLVGVIGSATMLGWTLGTIEAILISILAGFSVDYVIHLAHAYNHAEGEPDERILAAYGEMGVSVFSGMLTSVVASIPLFFCTLTFFAKFGTFLC 1035
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: B8BTM9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTM9_THAPS) HSP 1 Score: 88.2 bits (217), Expect = 1.130e-17 Identity = 53/131 (40.46%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 13 ESSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFGELVC 405 +S+IQ+ I+ V +A +V+ L+T + F ++ +V L+ + +V++GW + +ESI I I AG SVDYVVH+ HAY+ GD RI + +G+SV +G++T+V A L FC L +FAKFG +C Sbjct: 956 KSAIQSSILGVAIAFVVLLLSTHVLHLAFFASLSIVCVLVSVVGTMVMLGWYLGSIESILICIIAGFSVDYVVHLAHAYEIAKGDTYARITEAFGDLGISVFNGMITSVVASIPLFFCQLQFFAKFGTFLC 1086
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: A0A7S2R7I8_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R7I8_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.290e-16 Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 37 ISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKF 390 I V V+ +V+ +AT + V + + L+ + + + GW + V+E+I I AG SVDYV+H+ HAY GD + R+ + +MG SV SG+LT+V A L FC LT+FAKF Sbjct: 4 IGVLVSFVVIFIATRKLHLALLATVSIFSVLISVIGAVTIAGWTLGVIEAILFGILAGFSVDYVIHLAHAYSHAEGDVEERVMAAYAEMGTSVFSGMLTSVVASIPLFFCTLTFFAKF 121
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: K0RG27_THAOC (Sterol regulatory element-binding protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RG27_THAOC) HSP 1 Score: 84.3 bits (207), Expect = 2.480e-16 Identity = 47/131 (35.88%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 13 ESSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFGELVC 405 +++IQ+ ++ V +A +V+ ++T + + F ++ + L+ + +V++GW + +ES I I AG SVDYVVH+ HAY+ GD R+ + + +G+SV +G++T+V A L FC L +FAKFG +C Sbjct: 828 KTAIQSSVLGVVIAFVVLLISTRVFHLAFFASLSITAVLVSVVGTMVMLGWSLGSIESTLIGIIAGFSVDYVVHLAHAYEIASGDTYSRVTEAFSDLGISVFNGMVTSVVASIPLFFCQLQFFAKFGTFLC 958
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Match: A0A7S2BHV5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHV5_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.040e-16 Identity = 48/129 (37.21%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 7 LLESSIQNMIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVESISITIAAGLSVDYVVHILHAYQDVYGDRQIRIQGSLTKMGVSVTSGVLTTVGAVFVLLFCNLTWFAKFG 393 L S+ QN S+ +A++V+ L T NW + L + A + + GW++N++E++ I+IA G+SVDYV+H+ H+Y G+ ++ +L +MGVSVTSG+LTT A L ++ WF FG Sbjct: 301 LTTSAYQNASASLCLAVVVILLFTNNWWLTILCTFALYCVTSLVFAEMAIFGWQVNILEAVDISIAGGMSVDYVLHLAHSYNSQTGNHGEKVTKALKEMGVSVTSGMLTTFMACIALFMTDMLWFRLFG 429 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9452.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9452.1.1 >prot_P-wetherbeei_contig9452.1.1 ID=prot_P-wetherbeei_contig9452.1.1|Name=mRNA_P-wetherbeei_contig9452.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp MIISVTVAIIVVGLATMNWMVVPFVAVCLVTTLLMTLAILVLVGWRINVVback to top mRNA from alignment at P-wetherbeei_contig9452:185..1192- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9452.1.1 ID=mRNA_P-wetherbeei_contig9452.1.1|Name=mRNA_P-wetherbeei_contig9452.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig9452:185..1192- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9452:185..1192- >mRNA_P-wetherbeei_contig9452.1.1 ID=mRNA_P-wetherbeei_contig9452.1.1|Name=mRNA_P-wetherbeei_contig9452.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig9452:185..1192- (Phaeothamnion wetherbeei SAG_119_79)back to top |