mRNA_P-wetherbeei_contig9423.1.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9423.1.5
Unique NamemRNA_P-wetherbeei_contig9423.1.5
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A835YMY6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY6_9STRA)

HSP 1 Score: 518 bits (1334), Expect = 1.640e-161
Identity = 295/546 (54.03%), Postives = 361/546 (66.12%), Query Frame = 1
Query:   76 NVLHVVLLSPPDLSGSAGDSSGDKEEDEEVRARRLSSTL-------AQGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLANFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGLKGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAA-GKKVPQPANNHIFINVVVPDRVVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRTGEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVRPSQLLHATELVVQRKA-----VGGSGVSVGGAAVPWRADEGSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
            NVLH+ +LS           +   EE+ +    RL++ L        Q  VRR+TFLV                                  + T + K     E+ L R+IEPS+A+ LDLNRL+NF IRLA+++QA GG+VHLY G+P           G LP RYFAR+ S  SEY+  GG    +RY+VEK+FV A++++DLA+A A+ AAA + G++ P PANNHIFIN + PD  V+PG VA HM++LM RF DKI+RLGVTHFEMKI+C+LS D  PVP+RLVA+NPTG+VV V+TYVE RE G G   VF  VGG  G    EWEG  V  PYPV RP E +R  +A RSDTL+CYD+L+LFE   Q  W +F  ERPQAR+V PS +LHA ELVV R+         +  + G AA  W A E   L + EV RPAGQNDVGMVAWLVTLRTPEYPEGRQLVL+ANDITH+AGSFGTRED VFLLAS+YARAKGVPR+YLAANSGARIG+AE VK++FRVAW D ADP  G++YLYL
Sbjct: 1206 NVLHIAVLS-----------TFAAEEEADATVARLAAALDGHVDALQQACVRRVTFLVGSQ-------------------------------VTTLQLKQGTFTEDPLQRNIEPSNAHSLDLNRLSNFAIRLASSAQATGGDVHLYAGVPP----------GGLPVRYFARIASQGSEYLSGGG----KRYHVEKLFVEALSAIDLALAQADQAAALSQGRRPPPPANNHIFINSLTPDPDVQPGVVAEHMRQLMERFGDKIARLGVTHFEMKIICKLSGDAPPVPVRLVATNPTGFVVCVDTYVEAREDGQGQGVVFRGVGGAKGR---EWEGASVNKPYPVTRPLEARRAAAALRSDTLFCYDFLQLFENAVQAAWREFIAERPQARIVPPSSVLHAMELVVTRRPGAPTPAHNNSRANGKAAPAWHASELEHLMMEEVKRPAGQNDVGMVAWLVTLRTPEYPEGRQLVLIANDITHEAGSFGTREDAVFLLASRYARAKGVPRVYLAANSGARIGLAEGVKQRFRVAWQDDADPALGYRYLYL 1692          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE)

HSP 1 Score: 475 bits (1223), Expect = 2.900e-146
Identity = 288/597 (48.24%), Postives = 365/597 (61.14%), Query Frame = 1
Query:    1 GGMEELLKLLPQYTREKPRCAAGPTNVLHVVLLS---------PPDLSGSAGDSS----------------GDKEEDEEVRARRLSSTLAQGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLANFQIRLATTSQAHGGNVHLYVGLPKRHAA-KEAGLKGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPA--NNHIFINVVVPDRVVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPV-PLRLVASNPTGYVVRVETYVEVREGG----------GGGSPVFHAVGGVSGGRTGEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVRPSQLLHATELVVQRKAVGGSGVSVGGAAVPWRADEGSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
             GM+ LL++ PQY  E P CA G  N LH++LLS          P  S SA  +S                 D  +  +    R    L + DVRR++FL    A  G                        I G++TFR+++ Y +E+ LFRHIEPSHA+ LDL RL+NF I  A TSQ  GGNVH+Y   PK     K  G       RYFAR  S   E    G     +RY++E++ + A+N +DLAVA+AE A   AG+K P     NNHIF+N V PD  V    VA H+ ELM RF  K+ RLGV   E+KIV  + A+   + P+R+VASNPTGY VRVETYVEV EGG           GG     +  G SG + G W+G  VG PYPV  PFE KRL++  RSDTLYC+D+LEL EAG Q+ W  +A++RP+  +  PS +LH+ ELVV+R+  GG+G     A  PW A +   L + EV R AG NDVGMVAW++TLRTPEYPEGRQLVL+ANDITHQAGSFGTRED+VFLLAS+ +RA+G+PRLY+AANSGARIGMAES+K++F+V+WADP+DP  G++YLYL
Sbjct: 1131 AGMKSLLEVFPQYRGEAPACAEGAVNALHILLLSNPIDPQDTNAPGRSRSASVASEGAVAXXXXXXXXXXXDDTSQALQAALSRHREALVRADVRRVSFLSPRDAISGS---------------------TSILGVFTFRSRAGY-KEDGLFRHIEPSHAFHLDLPRLSNFAICPANTSQLQGGNVHVYKATPKEAVGDKTKGKAAGGASRYFARAAS---EIAGRG-----KRYFMEQIILEALNGIDLAVAEAEDACIRAGRKEPXXXXXNNHIFVNAVAPDPDVSAQDVAAHIGELMDRFEGKLQRLGVKQLEVKIVSCVGAEGGVLAPIRVVASNPTGYAVRVETYVEVSEGGKRLFRSLEGQAGGGARSRSSSGSSGMKQG-WDGSEVGMPYPVYLPFEDKRLLAQARSDTLYCFDFLELLEAGVQEQWAAYAKDRPEV-ISTPSMVLHSRELVVRRR--GGAGGKASAAGDPWSAADLDDLEMVEVDRAAGLNDVGMVAWMLTLRTPEYPEGRQLVLIANDITHQAGSFGTREDIVFLLASRLSRARGLPRLYIAANSGARIGMAESLKKRFKVSWADPSDPTLGYRYLYL 1693          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A7S2V2G8_9STRA (Acetyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G8_9STRA)

HSP 1 Score: 472 bits (1215), Expect = 4.350e-145
Identity = 282/575 (49.04%), Postives = 354/575 (61.57%), Query Frame = 1
Query:   16 LLKLLPQYTREKPRCAAGPTNVLHVVLLSPPDLSGSAGDSSGDKEEDEEVRARRLSSTLA-------QGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLANFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGL---KGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPANNHIFINVVVPDRVVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSA-DTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRTGEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVRPSQLLHATELVVQRK-----------AVGGSGVSVGGAAVPWRADEGSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
            LL+L P+ +      A+GP N LH+ +L   D   +A D +G+ EE E+       + LA       + ++RR+TF  +   A                          +PGIYT+R K+ + E+  LFRHIEP  A+ LDL RL NF I++ TT Q   GNVHLY  +P++ AA   GL   K  L +RYFARVV++TSEY+    EA       E+MFV ++N+L LA+   E A  A G++V QP+NNHIF+NVV P+ V+EP  +A  M++LM R+  KI+RLGV  FE+K+VCR S  DT+PVPLRL+ASNPTG+V+RV+TYVEV+E   G   VF  V   SG   G+WEG     PY V+RP  QKR  +   SDTLYCYDWLELFE      W   ++ERP A V  P+ LL A ELVV RK           A  G+   + G   PW A E   L +R V R  GQNDVGMVAW VTL TPEYP GR+LVL+ NDIT QAGSFGTRED VF LAS+YAR +G+PRLYLAANSGARIGM+ SVK KF+V W +  DP  GFKYLYL
Sbjct: 1230 LLELYPEAS------ASGPVNALHIAVLEY-DGPTTAVDMNGEVEEGEDPLVSNFRAFLAPYKDDLNKVNIRRVTFFCSTQGAS-----------------------LGLPGIYTYRTKTGFKEDS-LFRHIEPPLAFHLDLVRLTNFHIKVVTTQQTQNGNVHLYEAMPRKLAAAREGLDVNKVPLTKRYFARVVTITSEYIP--AEA-------ERMFVESLNALTLAIDSDEQATVAQGRRVAQPSNNHIFLNVVSPNTVLEPANIAGLMRKLMTRYQSKITRLGVAGFEVKLVCRFSQEDTSPVPLRLIASNPTGFVLRVDTYVEVKE---GNRTVFRTV---SGEGPGDWEGRDCTAPYQVSRPHSQKRAQAMASSDTLYCYDWLELFEEAVAAQWQAHSKERPSAPVNLPATLLTAHELVVFRKDDPEYQDSSAPATPGADTPMVGTTKPWEAKELDNLEIRRVLRSDGQNDVGMVAWDVTLFTPEYPAGRRLVLICNDITFQAGSFGTREDAVFFLASKYARERGIPRLYLAANSGARIGMSNSVKSKFKVCWLNEEDPSQGFKYLYL 1758          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A0B4L7U5_9STRA (Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7U5_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 7.220e-134
Identity = 270/568 (47.54%), Postives = 348/568 (61.27%), Query Frame = 1
Query:   10 EELLKLLPQYTREK---PRCAAG-PTNVLHVVLLSPPDLSGSAGDSSGDKEEDEEVRARRLSSTLAQ-------GDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLANFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGLKGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPANNHIFINVVVPDRVVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRTGEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVRPSQLLHATELVVQRKAVGGSGVSVGGAAVPWRA--DEGSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
            E  L LL ++ ++    PR A G P N LHV++L              D  +D +  A+RL+  L +         VRR+TF+V      GE E                      P IYTFR+K+++AE+  LFRHIEPSHA+ LDL RL++F I+LA T Q     VHLY  +PKR  A  AGLK    +R+FAR+VS T   + D     H     E++ V + N+L LA+   E AA  +G +       HIF N +  + VVEP  VA+ ++ LM R+ DK+ RLGV + E+K+VCRL  DTAPV LRL+ASNPTGYV+RV++YVEVRE   G   ++ ++GG   GR+G+  G  V  PY V RPFE++R  +   SDTLY YD+LEL E   Q  W ++A+ RP++ V+RP  ++   ELVV RK     G+   GAA  W A  +E  GL L EV+RP G NDVGMVAW VTL TPEY EGRQLVL+ANDIT QAGSFGTRED VF LAS++ARA G+PR+YLAANSGARIG+A+SVK KF+V W    DP  GFKY+YL
Sbjct: 1243 EHFLHLLAKFPKQSGLTPRAAVGGPVNALHVLILR-------------DAADDADATAKRLTLFLREHLEGLKAAAVRRVTFMVWHKEGKGEKEE-----------------IFQAPAIYTFRSKNDFAEDS-LFRHIEPSHAFHLDLVRLSSFTIKLADTRQTESSFVHLYEAVPKRSVATLAGLKPPYHKRFFARLVSTT---ITD-----HIPSEFERLMVESFNALYLAIGKEEDAAIKSGGRTXXXXXXHIFFNFMAANTVVEPILVADLLRTLMGRYQDKLLRLGVVNVELKLVCRLREDTAPVALRLLASNPTGYVLRVDSYVEVRE---GARTIYRSIGG---GRSGDLGGMDVNVPYSVTRPFEKQRQAALTASDTLYAYDFLELLERAVQLKWEEYAKLRPRSDVLRPRNVISVVELVVARKGTP-LGIVEEGAAEQWAAKEEEEGGLELLEVSRPPGLNDVGMVAWKVTLFTPEYVEGRQLVLIANDITIQAGSFGTREDTVFALASRHARAHGLPRIYLAANSGARIGLADSVKAKFKVGWNKEDDPNGGFKYIYL 1764          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: D8LHP3_ECTSI (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP3_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 6.810e-118
Identity = 254/594 (42.76%), Postives = 321/594 (54.04%), Query Frame = 1
Query:    1 GGMEELLKLLPQYTREKPRCAAGPTNVLHVVLLS---------PPDLSGSAGDSS--------------GDKEEDEEVRAR--RLSSTLAQGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLANFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGLK--GTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPANNHIFINVVVPDRVVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRTGE---------WEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVRPSQLLHATELVVQRKAVGGSGVSVGGAAVPWRADEGSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
             GME LL++ PQY  E P CA G  N LH+VLLS          P  S SA  +S               D E  + ++A   R    L + DVRR++FL    A  G                        I G++TFR+++ Y +E+ LFRHIEPSHA+ LDL RL+NF I  A TSQ  GGNVH+Y   PK     +   K  G    RYFAR  S   E    G     +RY++E+                                                                K+ RLGV   E+KIV  + A     P+R+VASNPTGY VRVETYVEV E   GG  +F ++ G +GG             W+G  VG PYPV  PFE KRL++  RSDTLYC+D+LEL EAG Q+ W  +A++RP+     PS +LH+ ELVV+         S  G   PW A +   L + EV R AG NDVGMVAW++TLRTPEYPEGRQ+VL+ANDITHQAGSFGTRED+VFLLAS+ +RA+G+PRLY+AANSGARIGMAES+K++F+V+WADP+DP  G++YLYL
Sbjct: 1237 SGMESLLEVFPQYRGEAPACAEGAVNALHIVLLSNPIDPEDTNAPGRSRSASAASEXXXXXXXXXXXXXADDETSQALQAALSRHREALMKADVRRVSFLSPREAISGS---------------------TSILGVFTFRSRAGY-KEDGLFRHIEPSHAFHLDLPRLSNFAICPANTSQLQGGNVHVYKATPKEAVGDKTKGKAAGGGASRYFARAAS---EIAGRG-----KRYFMEQ---------------------------------------------------------------GKLQRLGVKQLEVKIVSCVGAGGVLAPIRVVASNPTGYAVRVETYVEVSE---GGKRLFRSLEGQAGGGARSRSSSGMKQGWDGREVGMPYPVYLPFEDKRLLAQARSDTLYCFDFLELLEAGVQEQWAAYAKDRPEVTST-PSMVLHSRELVVRXXXXXXXKASAAGD--PWSASDLDDLEMVEVDRAAGLNDVGMVAWMLTLRTPEYPEGRQVVLIANDITHQAGSFGTREDIVFLLASRLSRARGLPRLYIAANSGARIGMAESLKKRFKVSWADPSDPTLGYRYLYL 1731          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A7R9U8E4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8E4_9STRA)

HSP 1 Score: 346 bits (887), Expect = 1.140e-103
Identity = 214/533 (40.15%), Postives = 300/533 (56.29%), Query Frame = 1
Query:   76 NVLHVVLLSPPDLSGSAGDSSGDKEEDEEVRARRLSSTLAQGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLANFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGLKGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPANNHIFINVVVPDRVVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRTGEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVRPSQLLHATELVVQRKAVGGSGVSVGGAAVPWRADEGSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
            N +H+++L    LS  A        E  +      +  L   ++RR+TF+V P       ++  +                   GI+T+R   E   E+++ RHIEP  AY L L RL+N+++R      +    VH+Y  +P      +A LK   P R+FAR VS       +G  A      +E MFV  +++ D+        A  + K+V   + NHIFIN+V P  V+    +   ++ +  R+ +K   L V+  E+K+  RLS ++ PVPL L+ SNPTG V++++TYV+V+E   G S VF  VGG    R GE EG  V  PYP++RP +  R  + + + TLY YDWLE+FEA     W  F   RP   + RP +L+ + ELVV+ K+ G           PW AD+   L + E++RP  QNDVGMVAWLVTL TPE P GRQ+V++ANDITH  GSFGTRED VF LAS+ AR + +PRLYLAANSGARIGMAES+++KF++AW    DP +GF+YLYL
Sbjct:   36 NAVHILVLGYGGLSLDAAKDDASLSEMLQSVCVENAELLKTYNIRRVTFMVPPLPKTAPSQAAPNVTAYRNV------------GIFTYRTALE-CSEDIMSRHIEPPLAYHLLLPRLSNYKVRPVPHESSQA--VHVYEAVPA-----DASLK--TPPRFFARAVSFC-----EGLSAA----VIEHMFVECISAFDII-----GGAFRSSKEV---SGNHIFINLVAPQSVLSTLDLEEIVRGIAERYSEKFQALRVSEVELKVTVRLSEESDPVPLWLIISNPTGLVLKLDTYVQVKE---GLSTVFRGVGG----RKGELEGVDVHAPYPISRPLDAVRARAIRSTGTLYVYDWLEIFEAAVDAAWDNFEALRPHIAIRRPRRLIESVELVVRSKSAGDG--------APWTADDMGDLQIHEISRPPAQNDVGMVAWLVTLFTPEAPGGRQMVVIANDITHSVGSFGTREDAVFYLASELARKRLLPRLYLAANSGARIGMAESIQKKFKIAWTKEGDPTSGFRYLYL 514          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A7S2LR84_9STRA (Acetyl-CoA carboxylase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LR84_9STRA)

HSP 1 Score: 350 bits (899), Expect = 9.440e-103
Identity = 233/564 (41.31%), Postives = 313/564 (55.50%), Query Frame = 1
Query:   10 EELLKLLPQYTREKPRCAAGPTNVLHVVLLSPPDLSGSAGDSSGDKEEDEEVRARRLSSTLAQGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLA-NFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGLKGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDL-AVADAEAAAAAAGKKVPQPANNHIFINVVVPDRVV-EPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRT----GEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVRPSQLLHATELVVQRKAVGGSGVSVGGAAVPWRADE--GSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
            + LLK  P+         +GP N LHV +LS    +G   D     E  E V ++ + + + Q D+RR+TF+V       E                       +P I+TFR  S++ E+  LFRHIEP+HA+ LDL RL+ NF ++   + Q   GN+ LY   PK +A  +   K +   R F R +S       +           E +FV ++N+LDL    +AE              NNH+FIN++  DRVV +P  V   +  ++ R  D++ RLG+T  E ++ C LS  + P+ +RLVA+NPTG+V  + TYVE  +       VF  VGG            WEG  V TPYP+ RPF+ +R  +A+ SDTLYCYD   LFEA  +  W+  A E       RP    + TELVVQ+K   GSG S       W   +     L L E+ R AG NDVGMVAWL+TL+T EYPEGRQ+VL+ANDIT +AGSFGTREDVVF LAS++ARAK VPRLY+AANSGARIG AE VK+ F+VA+ DP+ P +GF+YLY+
Sbjct: 1237 DTLLKAFPKNAE------SGPINNLHVFVLS----NGGCSDMDIFAERFEAVLSQYVDA-MTQADIRRVTFVVDTNTKAEE-----------------FVGAPTMPAIFTFRAVSDFKEDS-LFRHIEPNHAFHLDLTRLSKNFNVKGLNSQQTSTGNIQLYEATPKSYALTK-DTKASRAPRIFVRALSFVDAITSNA---------FESIFVDSMNALDLNGAGNAE--------------NNHLFINLISDDRVVLDPSEVEQALMSIIKRHGDRLKRLGLTEVETRLECCLSEGSPPIAIRLVANNPTGFVHVLNTYVEAVDDTET-KKVFRLVGGTKASLACSGDSSWEGMDVTTPYPLTRPFDAQRKAAAKSSDTLYCYDLPALFEAAVELKWSDAAAETG-VEGSRPMMTTYTTELVVQKK--DGSGGS-------WTMQDYLDGDLELAEMHRGAGANDVGMVAWLMTLKTTEYPEGRQVVLIANDITFKAGSFGTREDVVFKLASEFARAKRVPRLYVAANSGARIGTAEGVKKSFKVAFKDPSKPESGFQYLYV 1736          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A7S2A4C3_TRICV (Acetyl-CoA carboxylase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A4C3_TRICV)

HSP 1 Score: 347 bits (889), Expect = 1.960e-101
Identity = 220/577 (38.13%), Postives = 313/577 (54.25%), Query Frame = 1
Query:    1 GGMEELLKLLPQYTREKPRCAAGPTNVLHVVLLSPPDLSGSAGDSSGDKEEDEEVRARRLSSTLA-------QGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLA-NFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGLKGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPANNHIFINVVVP-DRVVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRT----GEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFAR----ERPQARVVRPSQLLHATELVVQRKAVGGSGVSVGGAAVPWR-ADEGSG-LALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
               E++L   PQY  +  +C AGP NVL+ ++          GDS  + ++  +  A+R    LA       + D+RR++F+                                +P ++T+R   ++ E+  LFR+IEPS AY LD+ RLA NF ++     Q   GN HLY+  P++ +A E   K     R F R ++   ++   G         VE+M V A+N+LDL+  + + A+           +NH+F+N+V   + V++P  V   +  +  R  D++SRLGV   E ++ C L   + P+ LR+VASNPTGYV  + TY+E  +  GG  P F  VGG            WEG  V  P P+ RPF+ +R  + + SDTLYCYD   LFEA  +Q W + A     E       RP  +++ TELVVQ+K  G            W  AD  SG L + +  R AG NDVGMVAWL+ L+T EYP GRQ+VL+ANDITH+AGSFGTREDVVF +AS++AR + +PRLY+AANSGARIG+AE V++ +RVA+ DP  P  GF+YLY+
Sbjct: 1007 AAFEKVLAEFPQYAGDDSQCPAGPVNVLYFIVT---------GDSQSNSQDVMDGLAKRCEELLAPHRDSLKKADIRRVSFIFG-------------------VDPDPTVDVYPMPALFTYRAPLDFKEDS-LFRNIEPSQAYHLDMTRLAENFSVKTLAIRQTSTGNCHLYLATPRK-SALEKDRKANKSPRIFVRALNYVQQFSSAG---------VERMLVDALNALDLSATNEKTAS-----------DNHLFLNLVSDYESVLDPVVVEQVVVAIFKRHSDRLSRLGVAEVEARLACCLGEGSPPITLRMVASNPTGYVPVMNTYIEAWDESGG-EPSFRLVGGTKASLACSGDSSWEGLKVSAPSPLPRPFDAQRKAALRASDTLYCYDLPALFEAAVEQQWNEAASKGGVEGGVRAAARPLMVMYTTELVVQKKGGG-----------DWTMADYMSGDLEMVQQQRGAGANDVGMVAWLMELKTTEYPNGRQVVLIANDITHKAGSFGTREDVVFKMASEFARDRRIPRLYVAANSGARIGLAEGVRKAYRVAFKDPKKPENGFEYLYV 1521          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A7S2L106_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L106_9STRA)

HSP 1 Score: 342 bits (878), Expect = 1.520e-100
Identity = 216/567 (38.10%), Postives = 303/567 (53.44%), Query Frame = 1
Query:    1 GGMEELLKLLPQYTREKPRCAAGPTNVLHVVLLSPPDLSGSAGDSSGDKEEDEEVRARRLSSTLAQGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLA-NFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGLKGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPANNHIFINVVVPDR--VVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRT----GEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVRPSQLLHATELVVQRKAVGGSGVSVGGAAVPWRADE--GSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
              ++ +L+  PQY    P C AGP NVL + +L        +GD  G   +  E    R+   L + D+RR+TF+V  P A                          +P ++TFR  + + E+  L+R IEP  +Y L++ RL  NF +       +  G V+LY   PK  A          PR  FAR VS   E+    G         E++ V A N++D              K   Q  +NH+F+NVV   +   ++P  V   +  ++ R+ ++ +RLG+   E K VCRL+ D  P+ LRLVASNPTG+V  V TY+E     G    VF ++GG            WE   V TPYP+ RPF+ +R  + + SDTLYCYD   LFEA  ++ W     +  Q     P+ ++  TELVV++K+ G           PW  ++     L L E  R AG+NDVGMVAWL+TL+T EYP GRQ+VL+ANDITH+AGSFGTREDVVF LAS++ARA+ +PRLY+AANSGARIG+AE +K+ F+VA+ DP+ P +G  +LY+
Sbjct:  413 NALKSILQQFPQYDGSAPPCRAGPANVLSIFVLE-----SYSGDDEGSLAKSIETLLARVLEDLEKADIRRVTFVV--PRAN-----------------------HPLPSVFTFRETAAFTEDH-LYRDIEPEMSYQLEMLRLTKNFSVTYLGAHLSPSGQVYLYKATPKASALAHDKKANKAPR-IFARAVSFIGEF--SAGT-------FEQLLVEAFNAVDSI------------KTSDQGGDNHLFMNVVSESQSSAIDPVMVEQVVSSILKRYSERTARLGIAEVEAKTVCRLAEDAHPISLRLVASNPTGFVQVVNTYIEAANESGS-KRVFKSIGGTKASMACSGDSSWEDLDVNTPYPLTRPFDAQRKAALRSSDTLYCYDLPALFEAAIEKQWADATGKGSQ-----PAMVMFTTELVVKKKSGG-----------PWTIEDYADGSLELVEAQRKAGKNDVGMVAWLMTLKTVEYPNGRQVVLIANDITHKAGSFGTREDVVFKLASEFARARRIPRLYIAANSGARIGLAEGIKKVFKVAFKDPSSPESGADFLYV 909          
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Match: A0A7S3QAD3_9STRA (Acetyl-CoA carboxylase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAD3_9STRA)

HSP 1 Score: 343 bits (880), Expect = 3.170e-100
Identity = 221/568 (38.91%), Postives = 319/568 (56.16%), Query Frame = 1
Query:   10 EELLKLLPQYTREKPRCAAGPTNVLHVVLLSPPDLSGSAGDSSGDKEEDEEVRARRLSSTLAQGDVRRITFLVAPPAAGGEGESGGDAXXXXXXXXXXXXXXXXIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLA-NFQIRLATTSQAHGGNVHLYVGLPKRHAAKEAGLKGTLPRRYFARVVSLTSEYVDDGGEAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPANNHIFINVVVPDR--VVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPVPLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGG----VSGGRTGEWEGCPVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARERPQARVVR----PSQLLHATELVVQRKAVGGSGVSVGGAAVPWRADE--GSGLALREVARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDVVFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAGFKYLYL 1674
            + +L+  PQY    PRCA+GPTN L++V+L        + +S     ++     +     L + D+RR++FL++     GE E                     +P I TFR K  Y EE+ LFR+I+P+HAY LDL+RL+ NF + L  + Q    N+HLY   P+  A      K     R + R +S   E+              EK+ V A+N+LD+AV +        G  V    +NH+F+N+V      ++ P  V   +  ++ R  D+I+ LG++  E K+ C L+ DT P+ LR+VASNPTGYV  + TYVE  +     +P+F  +GG    +S      WEG  + +PYP+ RPF+ +R  + + SD+LYCYD   LFEA  ++ W+  A E      +R    P  +++ +ELVV+RK          G + PW  D+     L L +  R AG N+VGMVAWL+TL+T EYP GRQ+VL++NDITH+AGSFGTREDVVF LAS++ARA   PRLY+AANSGARIG+AESVK+ F+V++ D + P  GF +LY+
Sbjct: 1191 DSVLQSFPQYVGTVPRCASGPTNSLYIVMLE----ENQSQESLDSISKNVVGILQSFRQQLDEADIRRVSFLISN--RNGEVEE------------------YPLPSILTFREKLGY-EEDSLFRNIDPAHAYLLDLSRLSKNFNMNLLDSKQNQSLNLHLYKATPRAEALV-VDKKANQSPRIYVRGLSFIVEFSSTS---------FEKLLVDALNALDIAVHEY-------GLTV----DNHLFLNLVSDHERIILNPVVVEQSVVAILKRHGDRITALGLSEVETKLTCSLNNDTPPIALRMVASNPTGYVHVMNTYVEAADPSST-APIFKLIGGTKASLSSSGDSSWEGMKITSPYPLTRPFDAQRKSALRSSDSLYCYDLPALFEAAVEKQWSDAAVEGGIEGGIRAASRPFMVMYTSELVVERK---------NGESGPWTMDDYLHGDLTLVQTQRRAGANNVGMVAWLMTLKTVEYPNGRQVVLISNDITHKAGSFGTREDVVFKLASEFARANRFPRLYVAANSGARIGLAESVKKLFKVSFKDASKPENGFDFLYV 1702          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9423.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMY6_9STRA1.640e-16154.03Acetyl-CoA carboxylase n=1 Tax=Tribonema minus Tax... [more]
A0A6H5K608_9PHAE2.900e-14648.24Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A7S2V2G8_9STRA4.350e-14549.04Acetyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica... [more]
A0A0B4L7U5_9STRA7.220e-13447.54Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochl... [more]
D8LHP3_ECTSI6.810e-11842.76Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculo... [more]
A0A7R9U8E4_9STRA1.140e-10340.15Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2LR84_9STRA9.440e-10341.31Acetyl-CoA carboxylase n=2 Tax=Leptocylindrus dani... [more]
A0A7S2A4C3_TRICV1.960e-10138.13Acetyl-CoA carboxylase n=1 Tax=Trieres chinensis T... [more]
A0A7S2L106_9STRA1.520e-10038.10Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3QAD3_9STRA3.170e-10038.91Acetyl-CoA carboxylase n=1 Tax=Chaetoceros debilis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9423contigP-wetherbeei_contig9423:268..2550 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LHP3
Preferred nameACACB
PFAMsACC_central,Biotin_carb_C,Biotin_carb_N,Biotin_lipoyl,CPSase_L_D2,Carboxyl_trans
Model size1674
Max annot lvl2759|Eukaryota
KEGG rclassRC00040,RC00253,RC00367
KEGG koko:K01946,ko:K11262
KEGG ReactionR00742,R04385,R04386
KEGG Pathwayko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko01212,ko04152,ko04910,ko04920,ko04922,ko04931,map00061,map00254,map00620,map00640,map01100,map01110,map01212,map04152,map04910,map04920,map04922,map04931
KEGG ModuleM00082
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000902,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001101,GO:0001650,GO:0001676,GO:0001894,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0003989,GO:0004075,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005975,GO:0005976,GO:0005977,GO:0006073,GO:0006082,GO:0006084,GO:0006091,GO:0006109,GO:0006112,GO:0006139,GO:0006163,GO:0006164,GO:0006355,GO:0006606,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006853,GO:0006869,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0006998,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009374,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009744,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010033,GO:0010256,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0010876,GO:0010883,GO:0010884,GO:0010906,GO:0012505,GO:0014070,GO:0015031,GO:0015629,GO:0015711,GO:0015718,GO:0015833,GO:0015849,GO:0015908,GO:0015909,GO:0015980,GO:0016020,GO:0016043,GO:0016053,GO:0016421,GO:0016874,GO:0016879,GO:0016885,GO:0017038,GO:0017076,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0019432,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019842,GO:0019867,GO:0019899,GO:0019900,GO:0019904,GO:0022607,GO:0030554,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031406,GO:0031667,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0031998,GO:0031999,GO:0032365,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032810,GO:0032870,GO:0032879,GO:0032989,GO:0033036,GO:0033218,GO:0033293,GO:0033365,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034220,GO:0034285,GO:0034504,GO:0034613,GO:0034641,GO:0034654,GO:0034694,GO:0034695,GO:0035257,GO:0035337,GO:0035383,GO:0035384,GO:0035639,GO:0036094,GO:0040008,GO:0040029,GO:0042175,GO:0042221,GO:0042493,GO:0042592,GO:0042759,GO:0042802,GO:0042886,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0043933,GO:0044042,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045017,GO:0045184,GO:0045540,GO:0045833,GO:0045893,GO:0045922,GO:0045927,GO:0045935,GO:0046320,GO:0046322,GO:0046390,GO:0046394,GO:0046460,GO:0046463,GO:0046483,GO:0046486,GO:0046620,GO:0046622,GO:0046890,GO:0046907,GO:0046942,GO:0046949,GO:0046966,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048638,GO:0048639,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050662,GO:0050692,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0050994,GO:0050995,GO:0051094,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051427,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0055086,GO:0055088,GO:0055114,GO:0060249,GO:0060255,GO:0060420,GO:0060421,GO:0061024,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070727,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071324,GO:0071329,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071495,GO:0071616,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072594,GO:0080090,GO:0090181,GO:0090407,GO:0097009,GO:0097066,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0098588,GO:0098656,GO:0098805,GO:0098827,GO:0106118,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901654,GO:1901655,GO:1901681,GO:1901700,GO:1901701,GO:1902001,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:1903825,GO:1905039,GO:1905952,GO:1905954,GO:1990542,GO:1990837,GO:2000026,GO:2000112,GO:2001141,GO:2001293,GO:2001295
Exons5
Evalue1.3e-117
EggNOG OGsCOG0439@1|root,KOG0368@2759|Eukaryota
EC2.1.3.15,6.3.4.14,6.4.1.2
Descriptionacetyl-CoA carboxylase
Cds size1668
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9423.1.5prot_P-wetherbeei_contig9423.1.5Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9423 274..2550 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187093.038346-UTR-P-wetherbeei_contig9423:267..2731683187093.038346-UTR-P-wetherbeei_contig9423:267..273Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9423 268..273 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187093.054144-CDS-P-wetherbeei_contig9423:273..4561683187093.054144-CDS-P-wetherbeei_contig9423:273..456Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9423 274..456 +
1683187093.0643797-CDS-P-wetherbeei_contig9423:543..8191683187093.0643797-CDS-P-wetherbeei_contig9423:543..819Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9423 544..819 +
1683187093.075894-CDS-P-wetherbeei_contig9423:1068..13921683187093.075894-CDS-P-wetherbeei_contig9423:1068..1392Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9423 1069..1392 +
1683187093.086592-CDS-P-wetherbeei_contig9423:1617..21341683187093.086592-CDS-P-wetherbeei_contig9423:1617..2134Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9423 1618..2134 +
1683187093.097119-CDS-P-wetherbeei_contig9423:2182..25501683187093.097119-CDS-P-wetherbeei_contig9423:2182..2550Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9423 2183..2550 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9423.1.5

>prot_P-wetherbeei_contig9423.1.5 ID=prot_P-wetherbeei_contig9423.1.5|Name=mRNA_P-wetherbeei_contig9423.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=556bp
MEELLKLLPQYTREKPRCAAGPTNVLHVVLLSPPDLSGSAGDSSGDKEED
EEVRARRLSSTLAQGDVRRITFLVAPPAAGGEGESGGDAAGGRGEDGLDG
SGGDGIPGIYTFRNKSEYAEEEVLFRHIEPSHAYFLDLNRLANFQIRLAT
TSQAHGGNVHLYVGLPKRHAAKEAGLKGTLPRRYFARVVSLTSEYVDDGG
EAHHRRYYVEKMFVSAVNSLDLAVADAEAAAAAAGKKVPQPANNHIFINV
VVPDRVVEPGTVANHMKELMLRFCDKISRLGVTHFEMKIVCRLSADTAPV
PLRLVASNPTGYVVRVETYVEVREGGGGGSPVFHAVGGVSGGRTGEWEGC
PVGTPYPVARPFEQKRLMSAQRSDTLYCYDWLELFEAGAQQLWTQFARER
PQARVVRPSQLLHATELVVQRKAVGGSGVSVGGAAVPWRADEGSGLALRE
VARPAGQNDVGMVAWLVTLRTPEYPEGRQLVLVANDITHQAGSFGTREDV
VFLLASQYARAKGVPRLYLAANSGARIGMAESVKRKFRVAWADPADPPAG
FKYLYL
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mRNA from alignment at P-wetherbeei_contig9423:268..2550+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9423.1.5 ID=mRNA_P-wetherbeei_contig9423.1.5|Name=mRNA_P-wetherbeei_contig9423.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2283bp|location=Sequence derived from alignment at P-wetherbeei_contig9423:268..2550+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCATGGAGGAGCTGCTGAAGCTGCTGCCGCAGTACACGCGCGAGAA GCCACGCTGCGCTGCCGGCCCCACCAACGTCCTTCACGTCGTGCTGCTGT CCCCGCCGGATCTCAGCGGCAGCGCGGGCGATTCCAGCGGCGACAAGGAG GAGGATGAGGAGGTGCGGGCCCGGCGGCTCTCGTCCACCGTGGCGTTCGC GCCTGCAGATGGCTCTTCCTACGACGAGGTTGTAGTGGCGGCGCTGTCGC GCGTGGCGTCGACGCACGCCGAAAAGCTGGCGCAGGGCGACGTGCGCCGC ATCACCTTCCTGGTGGCGCCGCCGGCGGCGGGCGGCGAGGGTGAAAGTGG CGGCGATGCTGCTGGCGGCCGGGGGGAGGACGGGCTGGACGGTTCGGGGG GGGACGGGATTCCGGGTATCTACACGTTCCGCAACAAGAGCGAGTACGCG GAGGAAGAGGTCCTGTTCCGCCACATCGAGCCGAGCCACGCCTACTTCCT CGACCTCAACCGCCTCGCCAACTTTCAGATCCGTCTGGCCACCACGTCCC AGGTGCGTAGGTGGGAGAAGCGGTTGGTTTGTGGGAATCATTACTACAAA ACTAAGTGTAGGAATCAGTTTCGCTTTCTTTCTTTGTCCGTGCCTGCTCA AGAGTATGTTGAAGTATAAGGCTCACTTGTCAAATCTATTCATTCTCAGA ATTTGTCTGCCTGACAAAGAGTTCCAACCTTTTACGTCGTTTGTCTCTCT TACGTAAACAAATGTTCGCCACGGTGGCCGGCATTATTCGACCGGAAACA GGCGCACGGCGGCAATGTCCACCTGTACGTGGGCCTGCCGAAGCGTCACG CCGCCAAGGAGGCGGGTCTCAAGGGCACGCTGCCGCGCCGCTACTTCGCG CGCGTCGTCTCGCTCACGTCCGAGTACGTCGATGACGGCGGCGAGGCGCA CCACCGCCGCTACTACGTCGAGAAGATGTTTGTGTCGGCTGTCAACTCGC TGGACCTGGCGGTGGCAGATGCCGAGGCGGCGGCGGCGGCGGCGGGCAAG AAGGTGCCGCAACCGGCCAACAACCACATCTTCATCAACGTGGTGGTGCC CGATCGCGTCGTCGAGCCCGGCACTGTGCGTCCTCCCTTTCTTTTTCCGC TTTATGCCTTTCACTCTGGGGTTCTCGGATGCGATAAGGAAAGAGGCAAC TACGGCTTTGCGCGACAATATCATAGGATGTGTGGCAGGTGCAACAGCGC CTGCCGCTGGCTTCTTTCTATTGGGACCAGAGACGCCCAATTTTAAAGTT CTGTTCTCACATCCTCTTTAGCGACACGATCCCTCGACGTGAGTACACAG GTGGCAAACCACATGAAGGAGCTGATGCTACGCTTCTGCGACAAGATCTC GCGCCTCGGCGTCACGCACTTCGAGATGAAGATCGTCTGCCGCCTGTCTG CCGACACAGCGCCCGTCCCGCTCCGCCTCGTCGCCTCCAACCCCACGGGC TACGTCGTCCGCGTCGAGACCTACGTCGAGGTGCGGGAGGGCGGCGGCGG TGGCAGTCCGGTCTTCCACGCCGTCGGCGGTGTCAGCGGCGGCCGGACCG GCGAGTGGGAAGGGTGCCCCGTCGGGACGCCATACCCCGTGGCGCGGCCG TTCGAGCAGAAGCGGCTCATGTCGGCGCAGCGCTCCGACACACTGTACTG CTACGACTGGCTGGAGCTGTTCGAGGCGGGCGCGCAGCAGCTGTGGACGC AGTTCGCACGTGAGCGGCCACAGGCTCGCGTGGTGCGCCCATCGCAGCTG CTGCACGCCACGGAGCTCGTCGTCCAGCGCAAGGCGGTGGGCGGCAGCGG CGTTTCCGTCGGCGGCGGTGTCGCCGGCGGCAGTTCCGGGGGCGGTTCTG CTGGGCGGTCGGCAGCGGCGGTGCCGTGGCGGGCGGACGAAGGGTCCGGG CTGGCGCTGCGGGAGGTGGCGCGGCCGGCGGGGCAGAACGATGTGGGCAT GGTGGCGTGGCTCGTGACGCTGCGCACGCCCGAGTATCCCGAGGGCCGCC AGCTGGTGCTGGTTGCCAATGACATCACTCACCAGGCCGGCTCTTTCGGC ACCCGCGAGGACGTCGTGTTTCTGCTGGCCTCGCAATACGCGCGCGCCAA GGGCGTCCCGCGGCTGTATCTGGCGGCGAATTCCGGGGCGCGGATCGGCA TGGCCGAGTCGGTCAAGAGGAAGTTCCGGGTGGCGTGGGCAGACCCGGCG GACCCGCCGGCGGGGTTCAAGTACCTGTACCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9423:268..2550+

>mRNA_P-wetherbeei_contig9423.1.5 ID=mRNA_P-wetherbeei_contig9423.1.5|Name=mRNA_P-wetherbeei_contig9423.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1668bp|location=Sequence derived from alignment at P-wetherbeei_contig9423:268..2550+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGAGCTGCTGAAGCTGCTGCCGCAGTACACGCGCGAGAAGCCACG
CTGCGCTGCCGGCCCCACCAACGTCCTTCACGTCGTGCTGCTGTCCCCGC
CGGATCTCAGCGGCAGCGCGGGCGATTCCAGCGGCGACAAGGAGGAGGAT
GAGGAGGTGCGGGCCCGGCGGCTCTCGTCCACCCTGGCGCAGGGCGACGT
GCGCCGCATCACCTTCCTGGTGGCGCCGCCGGCGGCGGGCGGCGAGGGTG
AAAGTGGCGGCGATGCTGCTGGCGGCCGGGGGGAGGACGGGCTGGACGGT
TCGGGGGGGGACGGGATTCCGGGTATCTACACGTTCCGCAACAAGAGCGA
GTACGCGGAGGAAGAGGTCCTGTTCCGCCACATCGAGCCGAGCCACGCCT
ACTTCCTCGACCTCAACCGCCTCGCCAACTTTCAGATCCGTCTGGCCACC
ACGTCCCAGGCGCACGGCGGCAATGTCCACCTGTACGTGGGCCTGCCGAA
GCGTCACGCCGCCAAGGAGGCGGGTCTCAAGGGCACGCTGCCGCGCCGCT
ACTTCGCGCGCGTCGTCTCGCTCACGTCCGAGTACGTCGATGACGGCGGC
GAGGCGCACCACCGCCGCTACTACGTCGAGAAGATGTTTGTGTCGGCTGT
CAACTCGCTGGACCTGGCGGTGGCAGATGCCGAGGCGGCGGCGGCGGCGG
CGGGCAAGAAGGTGCCGCAACCGGCCAACAACCACATCTTCATCAACGTG
GTGGTGCCCGATCGCGTCGTCGAGCCCGGCACTGTGGCAAACCACATGAA
GGAGCTGATGCTACGCTTCTGCGACAAGATCTCGCGCCTCGGCGTCACGC
ACTTCGAGATGAAGATCGTCTGCCGCCTGTCTGCCGACACAGCGCCCGTC
CCGCTCCGCCTCGTCGCCTCCAACCCCACGGGCTACGTCGTCCGCGTCGA
GACCTACGTCGAGGTGCGGGAGGGCGGCGGCGGTGGCAGTCCGGTCTTCC
ACGCCGTCGGCGGTGTCAGCGGCGGCCGGACCGGCGAGTGGGAAGGGTGC
CCCGTCGGGACGCCATACCCCGTGGCGCGGCCGTTCGAGCAGAAGCGGCT
CATGTCGGCGCAGCGCTCCGACACACTGTACTGCTACGACTGGCTGGAGC
TGTTCGAGGCGGGCGCGCAGCAGCTGTGGACGCAGTTCGCACGTGAGCGG
CCACAGGCTCGCGTGGTGCGCCCATCGCAGCTGCTGCACGCCACGGAGCT
CGTCGTCCAGCGCAAGGCGGTGGGCGGCAGCGGCGTTTCCGTCGGCGGCG
CGGCGGTGCCGTGGCGGGCGGACGAAGGGTCCGGGCTGGCGCTGCGGGAG
GTGGCGCGGCCGGCGGGGCAGAACGATGTGGGCATGGTGGCGTGGCTCGT
GACGCTGCGCACGCCCGAGTATCCCGAGGGCCGCCAGCTGGTGCTGGTTG
CCAATGACATCACTCACCAGGCCGGCTCTTTCGGCACCCGCGAGGACGTC
GTGTTTCTGCTGGCCTCGCAATACGCGCGCGCCAAGGGCGTCCCGCGGCT
GTATCTGGCGGCGAATTCCGGGGCGCGGATCGGCATGGCCGAGTCGGTCA
AGAGGAAGTTCCGGGTGGCGTGGGCAGACCCGGCGGACCCGCCGGCGGGG
TTCAAGTACCTGTACCTG
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