mRNA_P-wetherbeei_contig9310.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9310.1.1
Unique NamemRNA_P-wetherbeei_contig9310.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: A0A1F3YPW8_9PROT (Mechanosensitive ion channel protein MscS n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YPW8_9PROT)

HSP 1 Score: 510 bits (1313), Expect = 2.250e-177
Identity = 260/403 (64.52%), Postives = 324/403 (80.40%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVLG 1209
            +QP ++WQA     CL LAW L+R+++ +  +D + AL+ GA  F R+VFPL+ +LLL AGRA L  W   NLLSVAIPLF ++AGIRF VYLLRL F+ G  L  +ER+IA  VWV +A+HLTG+LPEI + L  + +T G+   SL + L +AFW+  T LLALWAG  LE RLMRAE LH+SLRVVFARLGKA+LLV ++L+VLP++G+DLTVLSVFGGALGVGLGLGLQKIASNY+SGFIILLDRSIR+GD ITADNH+GEV  ITTRY VVRS++GVEAIIPNDTL+TTTVLN++Y D+++RL+V+V VAY TD+  VL LL ++A R+PRVL+DP P A V  M +SG++LELGFWIEDPE+G  NV S+ISVE+L+ FRARGIEIP+PQREVR+ G
Sbjct:   18 QQPAILWQAGTLALCLSLAWWLARMLQWRAPDDSTEALKRGAAAFRRLVFPLLAMLLLVAGRAALRNWHSTNLLSVAIPLFGAMAGIRFAVYLLRLAFAHGSWLEAFERSIATVVWVALAMHLTGILPEIVNWLSAVELTAGRHTLSLWTLLNAAFWVALTLLLALWAGVALEVRLMRAENLHTSLRVVFARLGKAVLLVAAVLLVLPLLGVDLTVLSVFGGALGVGLGLGLQKIASNYLSGFIILLDRSIRLGDMITADNHHGEVTRITTRYVVVRSLNGVEAIIPNDTLVTTTVLNHSYTDRRIRLAVRVQVAYRTDMAGVLELLIKVASRHPRVLRDPEPTAQVTEMADSGVNLELGFWIEDPERGSQNVRSDISVELLSEFRARGIEIPYPQREVRLTG 420          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: UPI0019CE688A (Mechanosensitive ion channel n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019CE688A)

HSP 1 Score: 493 bits (1269), Expect = 1.160e-170
Identity = 253/402 (62.94%), Postives = 316/402 (78.61%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVL 1206
             QP ++WQAAV   CL  AW LS+L++ +  +     L+ GA  F R+VFPL+ +LLL AGRA L+ W + NLLSVAIPLF +LAGIRF VYLLRL F  G  L  +ER+IA  VW  +A+H+TG+LPEI   L  + +T GKQK +L   L +AFWI  T LLA+WAG+ LE RLMRAE LHSSLRVVFARLG+A+LL+ ++L+VLP++G+DLTVLSVFGGALGVGLGLGLQKIASNY+SGFIILLDRSIR+GD ITADNH+GEV  ITTRY VVRSM+GVEAIIPNDTL+TTTVLN++Y D+ +RL V+V V Y T++   L LL +IA R+PRV +DP P A V+ + +SG++LELGFWI+DPE+G  NVCS++SV +L+ FRAR IEIP PQREVR++
Sbjct:   18 HQPAILWQAAVLVLCLAAAWWLSQLLQWRAPDSSPETLKRGAAAFRRVVFPLLAMLLLLAGRAALAPWHNTNLLSVAIPLFGALAGIRFAVYLLRLGFPGGSWLDPFERSIATLVWAALAMHITGVLPEIVGWLSEVELTAGKQKLTLWMLLSAAFWIGVTLLLAMWAGAALEVRLMRAEGLHSSLRVVFARLGRAVLLIAAVLVVLPLIGVDLTVLSVFGGALGVGLGLGLQKIASNYLSGFIILLDRSIRLGDLITADNHHGEVTKITTRYLVVRSMTGVEAIIPNDTLVTTTVLNHSYTDRSVRLVVRVQVGYGTEMAEALELLVDIAARHPRVQKDPQPTAQVLKLADSGVELELGFWIKDPERGSQNVCSDLSVALLSEFRARNIEIPVPQREVRLV 419          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: A0A521XCP6_9PROT (Mechanosensitive ion channel n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XCP6_9PROT)

HSP 1 Score: 431 bits (1109), Expect = 1.940e-146
Identity = 228/404 (56.44%), Postives = 291/404 (72.03%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVLGG 1212
              PEV WQ A+  AC +LAWA  R +R+   E      + G GG  RI+FP+V ++ L    ++L RW  V+LL + +PL  SL  +RF  YLLR VF+ G  +  +ERAIA  VW G+ LH++GLLPE+ D  E I   +GKQKFSL   L+  FW++ T L ALW    +E RLMRAE+LHSSLRVVFARL ++LL++V++L+VLP+VGIDLTVLSVFGGA+GVGLG GLQKIASNYVSGFIILLDRSIRIGD ITADN YGEVKDITTRY VVR+  G EAIIPN+ LITTTV N++Y+++Q+RL+++V V Y  D    + L+   A ++PRVL DPP  A +    +SGI+LELG WI+DPE G  N+ SE+++ +   F+  GIEIP+PQREVRVL G
Sbjct:   17 HDPEVAWQIAILLACSVLAWAAGRALRLDRVEADGIW-KFGVGGLRRILFPVVALIPLMVSISLLKRWIEVDLLRLFVPLLVSLLLVRFFFYLLRHVFARGSIVRTFERAIAVLVWGGLVLHVSGLLPEVTDFFEEITFHIGKQKFSLWLVLQGLFWVVITLLAALWLSGAIEARLMRAESLHSSLRVVFARLARSLLVLVAVLMVLPLVGIDLTVLSVFGGAIGVGLGFGLQKIASNYVSGFIILLDRSIRIGDLITADNFYGEVKDITTRYVVVRAFDGREAIIPNEMLITTTVQNHSYSNRQIRLAIQVQVGYKVDPEHAMRLMEAAALKHPRVLADPPAKAFLARFADSGIELELGVWIDDPESGMLNLRSELNLAVWHAFQEAGIEIPYPQREVRVLHG 419          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: A0A1F4BBY9_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 TaxID=1797489 RepID=A0A1F4BBY9_9PROT)

HSP 1 Score: 425 bits (1092), Expect = 6.610e-144
Identity = 226/404 (55.94%), Postives = 294/404 (72.77%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVLGG 1212
            R+P ++WQ AV   C+  AWAL+R  R+   E  S   ++G GG  RI+FPL+ V L+   R +L++W HVNLL +A+PL  SLA IR V+YLLR  F  GG +AV+ER IA  VW  VAL+L G+LPE+ + LEG  I +G+Q+ SL   L++ FW L T L+ALWAGS  E RLMRAE LHSSLRVV +RL ++LL++V++LIVLP+VGIDLTVLSVFGGALGVGLG GLQKIASNYVSGFIILLDRS+++GD ITADN +G++  ITTRY VVR+  G EAIIPN+ LIT TV+N+ + D +LRL  +V V Y +D+   + +LA++A ++PRVL DPPP AL+    + GIDLELGFWI DPE G ANV S++++ +   F A GI + +P+  V V  G
Sbjct:   17 REPGILWQVAVLAVCIGAAWALARASRLDRIET-SGVWKLGVGGLKRIMFPLLAVALVMMARPILAQWHHVNLLRLAVPLLGSLALIRVVIYLLRHAFPPGGTVAVFERVIALAVWGVVALYLVGVLPEVIEFLEGEGIVIGRQRVSLWLMLQALFWALATLLVALWAGSATEARLMRAETLHSSLRVVLSRLARSLLVLVALLIVLPLVGIDLTVLSVFGGALGVGLGFGLQKIASNYVSGFIILLDRSVQLGDMITADNFHGKLTQITTRYVVVRAPDGREAIIPNEILITQTVVNHAHTDAKLRLVTQVQVDYGSDIEQAMRILADVARQHPRVLADPPPVALLSKFADGGIDLELGFWIGDPENGSANVGSDLNIGVYRAFGAAGIRMAYPRMIVAVERG 419          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: A0A2N2TY52_9PROT (Mechanosensitive ion channel protein MscS n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-14 TaxID=2013705 RepID=A0A2N2TY52_9PROT)

HSP 1 Score: 419 bits (1076), Expect = 2.010e-141
Identity = 220/402 (54.73%), Postives = 290/402 (72.14%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVL 1206
            +QPEV+WQ A    CL LAW  +R +R  +S  ++A  R+G  G NR++FPLV + L+   R +L +W HVNLLSVA+PL  S A IR V++ LR  F+  G LA +ER +   VW  VALH+ GLLPE+ D LE +   VGKQ+ SL   L+    +L T LLALW GSL+E  L++AE +  +LR+VFARL KALL+V+++LI LP+VGIDLT LSVFGGALGVG+G GLQKIA++YVSGFIILLDRSIRIG+ IT D H GEV  ITTRYTV+RS++G+EAIIPN+TLI + V N TY + ++RL V V V+Y TD+   + ++ E    +PRVL DPPP A ++   +SG+DLELGFWI DP++G  NV S++++ +   FR  G+EIP+PQREVR+L
Sbjct:   18 QQPEVLWQVATLAVCLGLAWLAARALRRDSSASENAW-RVGQRGLNRLLFPLVALGLVLLARVVLRQWHHVNLLSVAVPLLISFAVIRAVMFTLRQAFAPSGWLATFERMLTLVVWSVVALHILGLLPELIDMLESVGFAVGKQRLSLWLLLQGMATVLVTLLLALWIGSLMEASLLKAETIDGNLRLVFARLSKALLIVLAVLISLPLVGIDLTALSVFGGALGVGIGFGLQKIAASYVSGFIILLDRSIRIGNVITVDQHKGEVTRITTRYTVLRSLTGIEAIIPNETLIGSVVQNETYTNTRVRLGVPVQVSYKTDLDAAMRIMIEAGRAHPRVLPDPPPKAYLIGFADSGVDLELGFWIGDPQEGTLNVKSDVNLAVWHAFRKAGVEIPYPQREVRLL 418          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: A0A1F4CAS4_9PROT (Mechanosensitive ion channel protein MscS n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4CAS4_9PROT)

HSP 1 Score: 409 bits (1051), Expect = 1.070e-137
Identity = 213/402 (52.99%), Postives = 287/402 (71.39%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVL 1206
              P+V+WQ AV  +C +LAWA  R +R+  S +     + G GG  RI+FP+V ++ L  G ++L  W  V+LL + +PL  SL  +R   YLLR VF+ G  +  +ERAIA  VW  + LH++GLLPE+ D L+ I    G Q+F+L   L+  FW + T L ALW    +E RLMRAE+LHSSLRVVF+RL  ALL+++++L+VLP++GIDLT LS+FGGA+GVGLG GLQKIASNYVSGFIILLDRSIRIGD IT DN YGEVK ITTRY VVR++ G EAIIPN+ LI TTVLN++Y+++Q+RL + + +AY +D+   + L+ E A ++ RVL DPP  A V+   +SGIDL+LG WI+DPE G  ++ SE+ ++I   F+  GIEIP+PQ+EVR+L
Sbjct:   17 HDPQVVWQIAVLLSCFVLAWAAGRALRLG-SVEADGIWKFGVGGLRRILFPVVALIPLTLGISLLKHWIEVDLLRLFVPLLVSLLLVRLFFYLLRHVFARGSIVRTFERAIAVLVWGALVLHVSGLLPEVIDYLDDIAFHFGTQEFTLWLVLQGVFWAVITLLTALWLSGTIEARLMRAESLHSSLRVVFSRLATALLVLLALLLVLPLLGIDLTALSLFGGAIGVGLGFGLQKIASNYVSGFIILLDRSIRIGDLITVDNFYGEVKSITTRYVVVRALDGREAIIPNELLIATTVLNHSYSNRQIRLGLDLQIAYRSDLQRAMQLMEEAARKHARVLADPPATAFVLRFADSGIDLQLGVWIDDPENGTLSIRSELYLDIWRAFQEAGIEIPYPQQEVRIL 417          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: A0A7V7XM54_9RHOO (Mechanosensitive ion channel n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7V7XM54_9RHOO)

HSP 1 Score: 402 bits (1034), Expect = 3.750e-135
Identity = 214/402 (53.23%), Postives = 281/402 (69.90%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVL 1206
            +QP V+WQ AV   CL LAWA++R VR +T E Q A  + G  G  R+ FPL  ++ +   R +L  W  VNLL++ +PL  S A IR +V+ LR  F     LA +ER +A  VW  VAL++TGLLPE+ ++L+ IR TVGKQK SL   L+    +L T L ALW G L EQRL+ AE +  +LR+VFARL +A L+++++LI LP+VGIDLT LSVFGGALGVG+GLGLQKIA++YVSGFI+LLDRSIR+G+ I  D + GEV  ITTRYTV+R   GVE+I+PN+TLI + V N TY + ++RL+V V VAY+ D+   + LL E A  +PRVL DPP  A ++  G+SGIDLELGFWI DP +G  N+ S+I++ I   FR  GI IP+PQREV +L
Sbjct:   18 QQPAVLWQVAVLALCLGLAWAVARAVRRRTGETQEA--QFGKRGLKRLAFPLAALVFVLVARPLLKPWQSVNLLNLVLPLLGSFAVIRAMVFALRHGFPRAAWLAAFERVLALVVWSVVALYITGLLPELVESLDAIRFTVGKQKLSLWLILQGTLTVLATLLAALWLGGLAEQRLLAAEGMDGNLRLVFARLARAALVLLAVLISLPLVGIDLTALSVFGGALGVGIGLGLQKIAASYVSGFILLLDRSIRLGNMIVVDKYRGEVTQITTRYTVLRGADGVESIVPNETLIGSVVQNETYTNPRMRLAVAVQVAYACDLERAMRLLVEAAENHPRVLADPPARAYLLRFGDSGIDLELGFWIADPLEGSVNIKSDINLSIWHAFRREGIAIPYPQREVHLL 417          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: UPI001BC57D20 (Mechanosensitive ion channel n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BC57D20)

HSP 1 Score: 402 bits (1034), Expect = 4.440e-135
Identity = 210/406 (51.72%), Postives = 285/406 (70.20%), Query Frame = 1
Query:    7 PEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWT--HVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVLGGGP 1218
            P ++WQ AV    + + W LSR +R +  E +    ++G G  +R+VFPL  +L++  G+A+L  W   HVNLL++A+PL  +LA IR  VYLLR  F+  G L  +ER I  T+W+G+ LHLTG LPEI D L+ +   +GKQ+ S++  L     +L T L+ALW G  LE RLMRAE L  +LRVV  ++ +A+L+++++LI LP VGIDLTVLSVFGGALGVGLG GLQKIASNYVSGFIILLD SI  GD +T +N  G V  +T RY V++S  G EAIIPNDTLIT+TV+N++Y+D+++R+ + V VAY TDV  V+ L+ E A ++PRVL DP P A +    ++GIDLELG WI DPE+G+ N+ S++++ I  +FR  GIEIP+PQREVR+L   P
Sbjct:   21 PALLWQFAVLVLSVGIGWVLSRAIRRRLPEAEGVV-KLGLGSISRVVFPLAALLMVLIGKAVLRHWFGGHVNLLNIAVPLLGALALIRLAVYLLRHAFAPSGWLHTFERFITWTIWLGLTLHLTGFLPEILDVLDDLAFHLGKQRISVLMILAGGLSVLVTLLIALWLGRALEARLMRAETLDMNLRVVLTKVSRAVLILLAVLIALPAVGIDLTVLSVFGGALGVGLGFGLQKIASNYVSGFIILLDHSIHPGDILTVENRQGAVSRLTGRYMVLKSQDGTEAIIPNDTLITSTVINHSYSDRKMRIGLSVQVAYGTDVERVMGLMVEAARQHPRVLADPAPKAYLKDFADNGIDLELGMWINDPEEGQLNLKSDLNLAIWRIFRREGIEIPYPQREVRILNDAP 425          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: A0A1F4EH11_9PROT (Mechanosensitive ion channel protein MscS (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4EH11_9PROT)

HSP 1 Score: 399 bits (1025), Expect = 7.020e-135
Identity = 210/331 (63.44%), Postives = 260/331 (78.55%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIA 993
            ++P++ WQ  V   C+L AW L++L+R +  ED S AL+ GA  F R++FPL+ +LLL AGRA+L +W   NLLSVA+PLF SLAGIR VVYLLRL FS    L   ERAIA  VW  + LHLTG+LPE+ D LEGIR+ VG+Q  SL +    AFW+L T LLALW G +LE RL+R++ L SSLRVVFARL +A++LV ++L+VLP++G+DLTVLSVFGGALGVGLG GLQKIASNYVSGFIILLDRSIRIGD ITADN +G V  ITTRY V+RS++GVEAIIPND L+TTTVLN++Y DKQ+R++V++ VAY T + PV ALLAEIA
Sbjct:   18 QEPDIFWQVVVLAGCVLAAWWLAQLLRWRAPEDSSRALKHGAAAFRRVLFPLLAMLLLFAGRAVLGQWHKTNLLSVAVPLFGSLAGIRCVVYLLRLSFSQSAWLDASERAIALLVWGALVLHLTGILPELVDLLEGIRLPVGRQALSLWTLASVAFWVLVTLLLALWVGGVLEARLLRSQQLDSSLRVVFARLARAVILVAAVLVVLPLLGVDLTVLSVFGGALGVGLGFGLQKIASNYVSGFIILLDRSIRIGDLITADNQHGVVTRITTRYAVLRSLAGVEAIIPNDALVTTTVLNHSYTDKQVRVAVRLQVAYGTQIEPVQALLAEIA 348          
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Match: A0A497XI50_9PROT (Mechanosensitive ion channel-like protein n=1 Tax=Sulfurisoma sediminicola TaxID=1381557 RepID=A0A497XI50_9PROT)

HSP 1 Score: 401 bits (1030), Expect = 1.370e-134
Identity = 215/404 (53.22%), Postives = 286/404 (70.79%), Query Frame = 1
Query:    1 RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVFPLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSSGGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMSALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLVVSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRSIRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNTYADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAMGESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVRVLGG 1212
             QP++IWQ AV  AC+ LAW + R +  +  +       +   G  RI  PL  + L+   R +L++W HVNLLS+A+PL  SLA IR V ++LRL   +   LA +E+  +   W  VAL++TGLLP I D LEG++ TVGKQK +L   L+    +L T L+ALW G  +E RLM A  L S+LRV+F+RL KALL+V++++I LP+VGIDLT LSVFGGALGVGLGLGLQKIA+NY+SGFIILLDRSIRIG+ I+  N  G+V  ITTR+TV+R M+GVEAI+PN+ L+ + V N +Y+D ++R+++ V VAY+TD+   +A+L E A   PRVL+DPPP ALV    +SGI+LELGFWIEDPE G   V S I ++I   F+A G+EIPFPQRE+R+LGG
Sbjct:   17 HQPDIIWQVAVLAACVGLAWLVDRAL-ARRRKVGGGTTPLHQRGIGRIALPLTALGLVLVARPLLAQWHHVNLLSLAVPLLLSLAVIRMVFFVLRLGVRNVAWLASFEKVFSLVAWSIVALYITGLLPGIIDLLEGVQFTVGKQKLNLWLVLQGVGVLLTTLLVALWIGGTIEARLMAASGLDSNLRVLFSRLSKALLIVLAVMIGLPLVGIDLTTLSVFGGALGVGLGLGLQKIAANYISGFIILLDRSIRIGNLISVGNDRGQVTQITTRFTVLRGMTGVEAIVPNEMLVASVVQNESYSDPKVRVALPVQVAYATDLDRAMAILVEAALAQPRVLRDPPPKALVTLFADSGINLELGFWIEDPEAGTGEVRSAIYLDIWREFKAAGMEIPFPQREIRILGG 419          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9310.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3YPW8_9PROT2.250e-17764.52Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
UPI0019CE688A1.160e-17062.94Mechanosensitive ion channel n=1 Tax=Candidatus Pa... [more]
A0A521XCP6_9PROT1.940e-14656.44Mechanosensitive ion channel n=1 Tax=Betaproteobac... [more]
A0A1F4BBY9_9PROT6.610e-14455.94Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A2N2TY52_9PROT2.010e-14154.73Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
A0A1F4CAS4_9PROT1.070e-13752.99Mechanosensitive ion channel protein MscS n=1 Tax=... [more]
A0A7V7XM54_9RHOO3.750e-13553.23Mechanosensitive ion channel n=1 Tax=Rhodocyclacea... [more]
UPI001BC57D204.440e-13551.72Mechanosensitive ion channel n=1 Tax=Sulfuricella ... [more]
A0A1F4EH11_9PROT7.020e-13563.44Mechanosensitive ion channel protein MscS (Fragmen... [more]
A0A497XI50_9PROT1.370e-13453.22Mechanosensitive ion channel-like protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9310contigP-wetherbeei_contig9310:3..1226 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1163617.SCD_n00753
Preferred nameaefA
PFAMsMS_channel
Model size1224
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue5.12e-132
EggNOG OGsCOG3264@1|root,COG3264@2|Bacteria,1MWSA@1224|Proteobacteria,2VJTH@28216|Betaproteobacteria
Descriptionmechanosensitive ion channel
Cds size1224
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187087.2149856-CDS-P-wetherbeei_contig9310:2..12261683187087.2149856-CDS-P-wetherbeei_contig9310:2..1226Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9310 3..1226 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9310.1.1prot_P-wetherbeei_contig9310.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9310 3..1226 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9310.1.1

>prot_P-wetherbeei_contig9310.1.1 ID=prot_P-wetherbeei_contig9310.1.1|Name=mRNA_P-wetherbeei_contig9310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=408bp
RQPEVIWQAAVFGACLLLAWALSRLVRVKTSEDQSAALRMGAGGFNRIVF
PLVTVLLLAAGRAMLSRWTHVNLLSVAIPLFASLAGIRFVVYLLRLVFSS
GGGLAVWERAIAATVWVGVALHLTGLLPEIQDALEGIRITVGKQKFSLMS
ALESAFWILGTALLALWAGSLLEQRLMRAEALHSSLRVVFARLGKALLLV
VSILIVLPVVGIDLTVLSVFGGALGVGLGLGLQKIASNYVSGFIILLDRS
IRIGDWITADNHYGEVKDITTRYTVVRSMSGVEAIIPNDTLITTTVLNNT
YADKQLRLSVKVSVAYSTDVTPVLALLAEIAGRNPRVLQDPPPNALVVAM
GESGIDLELGFWIEDPEKGRANVCSEISVEILAVFRARGIEIPFPQREVR
VLGGGPA*
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mRNA from alignment at P-wetherbeei_contig9310:3..1226+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9310.1.1 ID=mRNA_P-wetherbeei_contig9310.1.1|Name=mRNA_P-wetherbeei_contig9310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1224bp|location=Sequence derived from alignment at P-wetherbeei_contig9310:3..1226+ (Phaeothamnion wetherbeei SAG_119_79)
AGGCAGCCCGAGGTGATTTGGCAGGCCGCGGTGTTCGGCGCGTGCCTGCT GCTTGCCTGGGCGCTGTCTCGCCTGGTCAGGGTGAAGACCTCCGAGGACC AGTCCGCGGCACTCAGGATGGGTGCGGGCGGCTTCAACCGCATCGTATTC CCGCTCGTTACCGTGCTGCTGCTGGCGGCGGGCCGCGCGATGCTGTCGCG CTGGACCCACGTGAACCTGCTGTCGGTTGCGATCCCGCTGTTTGCTTCGC TCGCCGGCATCCGCTTCGTGGTCTACCTGCTGCGCCTGGTGTTCTCGTCC GGCGGCGGCCTGGCGGTCTGGGAGCGGGCGATTGCGGCCACGGTCTGGGT CGGGGTGGCACTGCACCTCACCGGGTTGTTGCCCGAAATCCAGGATGCCC TCGAAGGCATCCGGATCACGGTCGGAAAGCAGAAGTTCTCGCTGATGAGC GCGCTCGAGTCCGCATTCTGGATCCTCGGCACGGCGCTGCTCGCGCTGTG GGCCGGCAGCCTGCTGGAGCAGCGGCTGATGCGCGCGGAAGCCCTGCATT CGAGCCTGCGCGTGGTGTTCGCGCGCCTCGGCAAGGCCTTGCTGCTCGTG GTGTCGATCCTCATCGTGCTCCCGGTCGTGGGCATCGACCTCACCGTGCT GTCGGTGTTCGGCGGCGCGCTGGGGGTGGGCCTCGGCCTCGGACTGCAAA AGATTGCAAGCAACTACGTGTCGGGATTCATCATCCTGCTCGACCGCTCG ATCCGGATCGGCGACTGGATCACGGCCGACAACCACTACGGCGAGGTCAA GGACATCACCACCCGATACACCGTGGTCCGGTCGATGTCGGGCGTGGAGG CGATCATCCCGAACGACACGCTGATCACGACGACTGTCCTGAACAATACC TACGCCGACAAGCAGTTGCGGCTGAGCGTGAAGGTGTCGGTGGCGTATTC GACCGACGTCACGCCGGTCCTCGCCCTGCTGGCGGAGATCGCCGGCCGCA ATCCGCGGGTGCTGCAGGACCCGCCGCCGAACGCGCTGGTCGTGGCGATG GGCGAGAGCGGGATCGACCTTGAACTGGGATTCTGGATCGAGGATCCTGA GAAGGGGCGGGCCAACGTGTGTTCCGAAATCAGCGTCGAAATCCTCGCTG TTTTCCGCGCCCGCGGTATCGAAATTCCCTTTCCGCAACGGGAGGTTAGG GTGCTCGGCGGCGGCCCGGCTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9310:3..1226+

>mRNA_P-wetherbeei_contig9310.1.1 ID=mRNA_P-wetherbeei_contig9310.1.1|Name=mRNA_P-wetherbeei_contig9310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1224bp|location=Sequence derived from alignment at P-wetherbeei_contig9310:3..1226+ (Phaeothamnion wetherbeei SAG_119_79)
AGGCAGCCCGAGGTGATTTGGCAGGCCGCGGTGTTCGGCGCGTGCCTGCT
GCTTGCCTGGGCGCTGTCTCGCCTGGTCAGGGTGAAGACCTCCGAGGACC
AGTCCGCGGCACTCAGGATGGGTGCGGGCGGCTTCAACCGCATCGTATTC
CCGCTCGTTACCGTGCTGCTGCTGGCGGCGGGCCGCGCGATGCTGTCGCG
CTGGACCCACGTGAACCTGCTGTCGGTTGCGATCCCGCTGTTTGCTTCGC
TCGCCGGCATCCGCTTCGTGGTCTACCTGCTGCGCCTGGTGTTCTCGTCC
GGCGGCGGCCTGGCGGTCTGGGAGCGGGCGATTGCGGCCACGGTCTGGGT
CGGGGTGGCACTGCACCTCACCGGGTTGTTGCCCGAAATCCAGGATGCCC
TCGAAGGCATCCGGATCACGGTCGGAAAGCAGAAGTTCTCGCTGATGAGC
GCGCTCGAGTCCGCATTCTGGATCCTCGGCACGGCGCTGCTCGCGCTGTG
GGCCGGCAGCCTGCTGGAGCAGCGGCTGATGCGCGCGGAAGCCCTGCATT
CGAGCCTGCGCGTGGTGTTCGCGCGCCTCGGCAAGGCCTTGCTGCTCGTG
GTGTCGATCCTCATCGTGCTCCCGGTCGTGGGCATCGACCTCACCGTGCT
GTCGGTGTTCGGCGGCGCGCTGGGGGTGGGCCTCGGCCTCGGACTGCAAA
AGATTGCAAGCAACTACGTGTCGGGATTCATCATCCTGCTCGACCGCTCG
ATCCGGATCGGCGACTGGATCACGGCCGACAACCACTACGGCGAGGTCAA
GGACATCACCACCCGATACACCGTGGTCCGGTCGATGTCGGGCGTGGAGG
CGATCATCCCGAACGACACGCTGATCACGACGACTGTCCTGAACAATACC
TACGCCGACAAGCAGTTGCGGCTGAGCGTGAAGGTGTCGGTGGCGTATTC
GACCGACGTCACGCCGGTCCTCGCCCTGCTGGCGGAGATCGCCGGCCGCA
ATCCGCGGGTGCTGCAGGACCCGCCGCCGAACGCGCTGGTCGTGGCGATG
GGCGAGAGCGGGATCGACCTTGAACTGGGATTCTGGATCGAGGATCCTGA
GAAGGGGCGGGCCAACGTGTGTTCCGAAATCAGCGTCGAAATCCTCGCTG
TTTTCCGCGCCCGCGGTATCGAAATTCCCTTTCCGCAACGGGAGGTTAGG
GTGCTCGGCGGCGGCCCGGCTTGA
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