mRNA_P-wetherbeei_contig9226.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9226.1.1
Unique NamemRNA_P-wetherbeei_contig9226.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: A0A7S3Y389_HETAK (Imidazoleglycerol-phosphate dehydratase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y389_HETAK)

HSP 1 Score: 134 bits (337), Expect = 3.970e-35
Identity = 67/96 (69.79%), Postives = 78/96 (81.25%), Query Frame = 1
Query:    7 ALFWDMDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRLLAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIPP 294
            AL  DMDGVLAEVSRSYR AIV+TA  +G  IT++D+ REK  GNANNDWVLT+RL  + GV+ TL+AVTEKFEELYQG+PG P GLC LETL+ P
Sbjct:   27 ALLLDMDGVLAEVSRSYRAAIVETAKSFGAEITSEDVGREKAKGNANNDWVLTQRLCKSKGVDVTLEAVTEKFEELYQGVPGTP-GLCELETLLVP 121          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: W2PDF3_PHYPN (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PDF3_PHYPN)

HSP 1 Score: 119 bits (298), Expect = 7.280e-32
Identity = 64/104 (61.54%), Postives = 76/104 (73.08%), Query Frame = 1
Query:    1 VAALFWDMDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRL----LAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIPPIG 300
            V AL  DMDGVLAEVS+SYRQAI+DTA H+GV++T +DI + K+ GNANNDW LT RL    L  A    TL+AVT +FE LYQG+ G  PGLC LETL+ P G
Sbjct:    5 VQALLLDMDGVLAEVSQSYRQAIIDTARHFGVSVTHEDIDQHKLAGNANNDWQLTHRLVVDGLNGASSAPTLEAVTAQFEALYQGV-GNTPGLCELETLLTPKG 107          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: A0A7S2XUK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUK9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 9.170e-32
Identity = 59/94 (62.77%), Postives = 72/94 (76.60%), Query Frame = 1
Query:    7 ALFWDMDGVLAEVSRSYRQAIVDTALHWGVA-ITADDILREKVNGNANNDWVLTRRLLAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETL 285
            A+  DMDGVLA+V +SYR AIV TA H+G   +T +D+  EKV GNANNDWVLT+RLL + G+E +L+ VTEKFEELYQG    P GLC+LETL
Sbjct:   60 AILLDMDGVLADVGQSYRSAIVQTAEHFGAKNVTQEDVTAEKVKGNANNDWVLTQRLLKSKGIEVSLEDVTEKFEELYQGTEDSP-GLCSLETL 152          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: A0A418EEN2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EEN2_9STRA)

HSP 1 Score: 119 bits (299), Expect = 6.110e-31
Identity = 61/95 (64.21%), Postives = 71/95 (74.74%), Query Frame = 1
Query:    7 ALFWDMDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRLLAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIP 291
            AL WDMDGVLAEVSRSYR AI+DTA  +GV +T  DI   K+ GNANNDWVLT RL++A+ VE TL+ VT  FEE+YQG     PGL  LETL+P
Sbjct:   10 ALLWDMDGVLAEVSRSYRSAIIDTAASFGVTVTHVDIDTAKLAGNANNDWVLTHRLISASAVEVTLEQVTIAFEEIYQGT-DSTPGLYRLETLLP 103          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: A0A835YW16_9STRA (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW16_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.330e-31
Identity = 62/90 (68.89%), Postives = 66/90 (73.33%), Query Frame = 1
Query:   22 MDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRLLAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIP 291
            MDGVLAEVS SYRQAIVDTA  W V +T + I   K  GNANNDWVLTRR L  AG   TL+ VT+KFEELYQG PG P GLC LE LIP
Sbjct:    1 MDGVLAEVSGSYRQAIVDTAAAWDVTVTPEQIEAAKAKGNANNDWVLTRRFLTEAGKTATLEEVTDKFEELYQGTPGKP-GLCTLERLIP 89          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: A0A485LAP2_9STRA (Imidazoleglycerol-phosphate dehydratase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAP2_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.550e-30
Identity = 61/95 (64.21%), Postives = 70/95 (73.68%), Query Frame = 1
Query:    7 ALFWDMDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRLLAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIP 291
            AL WDMDGVLAEVSRSYR AIV TA  +GV +T DDI   K+ GNANNDWVLT RL+ +  ++ TL+ VT KFEE+YQG     PGL  LETLIP
Sbjct:    6 ALLWDMDGVLAEVSRSYRSAIVMTAAAFGVTVTVDDIENAKLAGNANNDWVLTHRLITSQAIQATLEQVTAKFEEIYQGT-DTTPGLYCLETLIP 99          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: W4FPF6_9STRA (Imidazoleglycerol-phosphate dehydratase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPF6_9STRA)

HSP 1 Score: 120 bits (300), Expect = 5.150e-30
Identity = 61/95 (64.21%), Postives = 71/95 (74.74%), Query Frame = 1
Query:    7 ALFWDMDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRLLAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIP 291
            AL WDMDGVLAEVSRSYR AI+DTA  +GV +T  DI   K+ GNANNDWVLT RL++A+ VE TL+ VT  FEE+YQG     PGL  LETL+P
Sbjct:   10 ALLWDMDGVLAEVSRSYRSAIIDTAASFGVTVTHVDIDTAKLAGNANNDWVLTHRLISASAVEVTLEQVTVAFEEIYQGT-DSTPGLYRLETLLP 103          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: D0P2W5_PHYIT (Imidazoleglycerol-phosphate dehydratase n=6 Tax=Phytophthora TaxID=4783 RepID=D0P2W5_PHYIT)

HSP 1 Score: 119 bits (298), Expect = 8.920e-30
Identity = 65/104 (62.50%), Postives = 75/104 (72.12%), Query Frame = 1
Query:    1 VAALFWDMDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRL----LAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIPPIG 300
            V AL  DMDGVLAEVS+SYRQAI+DTA H+GV +T +DI R K+ GNANNDW LT RL    L  A    TL+AVT +FE LYQG+ G  PGLC LETL+ P G
Sbjct:    5 VQALLLDMDGVLAEVSQSYRQAIIDTARHFGVPVTHEDIDRHKLAGNANNDWQLTHRLVLDGLNNARAAPTLEAVTAQFEALYQGV-GNTPGLCELETLLTPEG 107          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: A0A662XA66_9STRA (Imidazoleglycerol-phosphate dehydratase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XA66_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.110e-29
Identity = 64/107 (59.81%), Postives = 77/107 (71.96%), Query Frame = 1
Query:    1 VAALFWDMDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRLLA-------AAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIPPIG 300
            V AL  DMDGVLAEVS+SYRQAIVDTA H+GV +T +DI ++K+ GNANNDW LT+RL+A       A     +L AVT +FE LYQG+ G  PGLC LETL+ P G
Sbjct:    9 VQALLLDMDGVLAEVSQSYRQAIVDTARHFGVTVTPEDIDQQKLAGNANNDWQLTQRLIAERLPLKDATAAIPSLDAVTAQFEALYQGV-GSTPGLCDLETLLTPKG 114          
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Match: A0A024TCM6_9STRA (Imidazoleglycerol-phosphate dehydratase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCM6_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.520e-29
Identity = 61/95 (64.21%), Postives = 69/95 (72.63%), Query Frame = 1
Query:    7 ALFWDMDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRRLLAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIP 291
            AL WDMDGVLAEVSRSYR AIV TA  +GV +T  DI   K+ GNANNDWVLT RL+ +  VE TL+ VT  FEE+YQG   G PGL  LETL+P
Sbjct:   10 ALLWDMDGVLAEVSRSYRAAIVSTAARFGVTVTHVDIDDAKLAGNANNDWVLTHRLITSKSVEVTLEQVTVAFEEIYQGT-DGTPGLYRLETLLP 103          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9226.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y389_HETAK3.970e-3569.79Imidazoleglycerol-phosphate dehydratase n=2 Tax=He... [more]
W2PDF3_PHYPN7.280e-3261.54Imidazoleglycerol-phosphate dehydratase n=1 Tax=Ph... [more]
A0A7S2XUK9_9STRA9.170e-3262.77Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A418EEN2_9STRA6.110e-3164.21Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A835YW16_9STRA7.330e-3168.89Imidazoleglycerol-phosphate dehydratase n=1 Tax=Tr... [more]
A0A485LAP2_9STRA2.550e-3064.21Imidazoleglycerol-phosphate dehydratase n=1 Tax=Ap... [more]
W4FPF6_9STRA5.150e-3064.21Imidazoleglycerol-phosphate dehydratase n=6 Tax=Ap... [more]
D0P2W5_PHYIT8.920e-3062.50Imidazoleglycerol-phosphate dehydratase n=6 Tax=Ph... [more]
A0A662XA66_9STRA2.110e-2959.81Imidazoleglycerol-phosphate dehydratase n=2 Tax=No... [more]
A0A024TCM6_9STRA3.520e-2964.21Imidazoleglycerol-phosphate dehydratase n=2 Tax=Ap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9226contigP-wetherbeei_contig9226:90..644 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4787.PITG_10777T0
PFAMsHAD_2,IGPD
Model size300
Max annot lvl4776|Peronosporales
KEGG rclassRC00932
KEGG koko:K01693
KEGG ReactionR03457
KEGG Pathwayko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230
KEGG ModuleM00026
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.75e-28
EggNOG OGsCOG0131@1|root,KOG3143@2759|Eukaryota,3Q7YT@4776|Peronosporales
EC4.2.1.19
DescriptionBelongs to the imidazoleglycerol-phosphate dehydratase family
Cds size279
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187082.640624-CDS-P-wetherbeei_contig9226:89..2331683187082.640624-CDS-P-wetherbeei_contig9226:89..233Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9226 90..233 -
1683187082.6501255-CDS-P-wetherbeei_contig9226:488..6231683187082.6501255-CDS-P-wetherbeei_contig9226:488..623Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9226 489..623 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187082.6580756-UTR-P-wetherbeei_contig9226:623..6441683187082.6580756-UTR-P-wetherbeei_contig9226:623..644Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9226 624..644 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9226.1.1prot_P-wetherbeei_contig9226.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9226 90..623 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9226.1.1

>prot_P-wetherbeei_contig9226.1.1 ID=prot_P-wetherbeei_contig9226.1.1|Name=mRNA_P-wetherbeei_contig9226.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp
MDGVLAEVSRSYRQAIVDTALHWGVAITADDILREKVNGNANNDWVLTRR
LLAAAGVETTLQAVTEKFEELYQGIPGGPPGLCALETLIPPIG
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mRNA from alignment at P-wetherbeei_contig9226:90..644-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9226.1.1 ID=mRNA_P-wetherbeei_contig9226.1.1|Name=mRNA_P-wetherbeei_contig9226.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig9226:90..644- (Phaeothamnion wetherbeei SAG_119_79)
GTGGCGGCGCTGTTTTGGGACATGGACGGCGTGCTGGCGGAGGTCTCACG CTCCTACCGCCAGGCTATTGTCGACACGGCGCTCCACTGGGGCGTCGCCA TCACGGCGGACGACATCTTGCGGGAAAAGGTCAACGGCAACGCCAACAAT GACTGGGTATGCTCTGTTCGCCCCTCGCCCTGCCTTTTGCCGCCGCCGGC GTTTGAATTCCTGACCCGGGCCGGCAATGCTCTCGGAAGGAAATACTTCT CGAAAAGAAATTCCTTTTAGCCTGATCTCGATTGTGAAGTTTAGCGAACG GTTCTTTGTTCCTTGTTCAGCATCTTACATTTCCTGCTCTATCGTAAATA TCGCCATTCGCACGACCGCCCGTGCTCTGTCTCATCGCTGTCTTTCAAAC ACAACCTCCAGGTGTTGACGCGGCGGCTGCTGGCGGCGGCGGGCGTGGAG ACGACGCTGCAGGCGGTAACGGAGAAGTTTGAGGAGCTTTACCAGGGCAT CCCAGGGGGACCGCCCGGGCTCTGCGCGCTCGAGACCCTCATCCCTCCAA TCGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9226:90..644-

>mRNA_P-wetherbeei_contig9226.1.1 ID=mRNA_P-wetherbeei_contig9226.1.1|Name=mRNA_P-wetherbeei_contig9226.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig9226:90..644- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGGCGTGCTGGCGGAGGTCTCACGCTCCTACCGCCAGGCTATTGT
CGACACGGCGCTCCACTGGGGCGTCGCCATCACGGCGGACGACATCTTGC
GGGAAAAGGTCAACGGCAACGCCAACAATGACTGGGTGTTGACGCGGCGG
CTGCTGGCGGCGGCGGGCGTGGAGACGACGCTGCAGGCGGTAACGGAGAA
GTTTGAGGAGCTTTACCAGGGCATCCCAGGGGGACCGCCCGGGCTCTGCG
CGCTCGAGACCCTCATCCCTCCAATCGGT
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