mRNA_P-wetherbeei_contig9151.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9151.1.2
Unique NamemRNA_P-wetherbeei_contig9151.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A835YNB1_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB1_9STRA)

HSP 1 Score: 380 bits (977), Expect = 3.540e-127
Identity = 178/284 (62.68%), Postives = 216/284 (76.06%), Query Frame = 1
Query:    1 QRLVYPGVKFNDQGKPISQPWLLCSDTDANDIEPMADPFILMVDRG--ECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEGCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGT-HCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGVERFKDAGCVAAAMSEA 843
            QRLVYPG  + D       P+ LCSD++A+     A PFIL+VDRG  +CTF +KVRRAQHLGA+GVII D++C+CGD  C SA  C+ VEPIMADDGSGADITIPSFLM K D   I SHL+A Q++Q EMTWS+PAPDDRVEW LWTSA D  ATAFK +F+DVV +LG HAYF PHY++Y+G  YGC D T HCGNLCTN GRYC  DPD DRD GLSG D+++E+LRQKCIW  YGG++A   E+G+G  WW YV +F+ KCG+ +F D+ C++ AMSEA
Sbjct:   59 QRLVYPG-NYTD-------PYTLCSDSEADKFVNPAQPFILLVDRGGQDCTFVSKVRRAQHLGAAGVIIVDDRCICGDGACASAVACQPVEPIMADDGSGADITIPSFLMTKMDGNIIKSHLQANQFIQAEMTWSLPAPDDRVEWSLWTSAQDSAATAFKAEFRDVVTALGTHAYFTPHYIVYDGEEYGCRDDTNHCGNLCTNAGRYCNPDPDFDRDSGLSGADIIQETLRQKCIWLHYGGDKASKGEQGIGERWWTYVQTFSKKCGMGKFVDSSCISRAMSEA 334          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A836CIN2_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN2_9STRA)

HSP 1 Score: 359 bits (921), Expect = 4.750e-118
Identity = 175/286 (61.19%), Postives = 206/286 (72.03%), Query Frame = 1
Query:    1 QRLVYPGVKFNDQGKPISQPWLLCSDTDANDI-EPMAD-PFILMVDRG--ECTFAAKVRRAQHLGASGVIIADNKCLC-GDKTCVSAEGCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGVERFKDAGCVAAAMSE 840
            QRLVYPG           QP+ LCSD DA     P  + PFIL+VDRG  +CTF +KVRRAQHLGA+G IIAD++C C GD  C S+  CE +EPIMADDGSGADITIPSFLM K D + I  HL+ K+++QVEMTWS+PAPDDRVEW LWT+A+D  A AFK +  DV  +LG HA+F PHY +Y+G  YGC D TH CGNLCTN GRYC  DPD DRD GLSG DV+RE+LRQKCIW  YGG +AP  ++G+G  WW YVN F   C  ++F D  CVAAAMSE
Sbjct:   41 QRLVYPGD--------FDQPYQLCSDVDAAKFTNPNPNQPFILLVDRGGADCTFVSKVRRAQHLGAAGAIIADDRCKCAGDAQCDSSVACEQLEPIMADDGSGADITIPSFLMTKTDGDLIKEHLKLKEFLQVEMTWSLPAPDDRVEWSLWTTAIDAAAAAFKGEMADVAAALGTHAFFTPHYTIYDGEEYGCRDDTHHCGNLCTNAGRYCNPDPDFDRDSGLSGADVIRETLRQKCIWLHYGGAQAPEADQGVGIKWWSYVNKFTTLCNTDKFTDETCVAAAMSE 318          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: D8LR61_ECTSI (PA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR61_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 1.040e-115
Identity = 178/292 (60.96%), Postives = 208/292 (71.23%), Query Frame = 1
Query:    1 QRLVYPGVKFNDQGKPISQPWLLCSDTDANDIE--PMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKT---CVSAEG--CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDG--THCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGVE--RFKDAGCVAAAMSEA 843
            +R+V+ GV   D G+ + + W LCSD D  D+   P   PFILMVDRG+CTFA+KVR+AQH+GA GVIIADN CLC D+    C  +    CE VEPIMADDGSG DITIPSFLMKK DA  I + LE  Q VQ EMTWS+PAPDDRVEW LWTSA+D +A  FKRDFK+VV +LG  A F P+Y++YNG  YGCT G   +CG+LCTN GRYCMTDPD D   G+SG DVVRESLRQKC+W  YGGE+AP  ++G+G  WW YVN F   C V   RF D  CVA AM  A
Sbjct:   65 ERIVHGGV---DPGQSV-RTWTLCSDDDVKDVPMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGICNKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAAPFKRDFKEVVKTLGKSAQFTPYYVVYNGDSYGCTGGGANNCGSLCTNDGRYCMTDPDFDTKAGVSGADVVRESLRQKCVWNTYGGEDAPLADQGVGEKWWSYVNEFFSSCSVSGNRFNDENCVARAMKAA 352          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A6V1XHF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XHF6_HETAK)

HSP 1 Score: 311 bits (797), Expect = 3.290e-100
Identity = 145/246 (58.94%), Postives = 177/246 (71.95%), Query Frame = 1
Query:  112 PFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEGCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGV-ERFKDAGCVAAAMSEA 843
            PFILM DRG+CTF +KVRRAQH GA+GV+IADNKCLCGD  C S E CE +EPIMADDGSGADITIP+FLMKK DA+ +   +   Q V  EM+W++P PDDRVEW+LWT+A+D  A  FK+DF+ V   LG  AYF PHY++Y+G+   CT  +  CGNLCTN GRYC+ DPD DR +G+SG DVV E+LRQ CIW+ YGG+ A   + G+G  WW YVN F   C   E+F  A C A  M +A
Sbjct:   93 PFILMADRGDCTFVSKVRRAQHAGAAGVLIADNKCLCGDAACTSQEACEPLEPIMADDGSGADITIPAFLMKKVDADLVKGQILQGQLVVAEMSWALPNPDDRVEWDLWTTAIDDGAQTFKQDFEVVTSKLGPRAYFTPHYVVYDGNELRCTTASDKCGNLCTNQGRYCLPDPDNDRHKGISGADVVEENLRQLCIWRAYGGDAANQADIGVGTKWWRYVNGFQAACNTPEKFASAACKANVMKQA 338          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A4D9DEA6_9STRA (PA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEA6_9STRA)

HSP 1 Score: 306 bits (783), Expect = 6.580e-98
Identity = 146/263 (55.51%), Postives = 178/263 (67.68%), Query Frame = 1
Query:   67 LCSDTDANDIEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAE--GCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTD-GTHCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCG-VERFKDAGCVAAAMSEA 843
            +CS   A+++     P+ILMVDRG+CTF  KVR AQH GASGV++ADN C+C D  C       C+ +EPIMADDGSGADITIPSFL+ KPDA+AI   L  +  VQVEMTWS+P PDDRVEW LWTSA D ++ A K +FK+ + +LG H YF P+Y +Y+G+ Y C +   HCG+LCTN GRYCM DPD D   G SG D+V E+LRQKCIW  YGGE     E+G+G  WW YV  F  KC    RF D  C+  AM  A
Sbjct:   59 MCSAPTADEVAQWKSPYILMVDRGDCTFVTKVRHAQHAGASGVLVADNLCVCKDLACHPDPDTSCQGIEPIMADDGSGADITIPSFLLYKPDADAIKEKLRQESLVQVEMTWSLPTPDDRVEWSLWTSANDSSSAALKEEFKEAMAALGQHQYFTPYYQVYDGAAYNCVNFPDHCGSLCTNHGRYCMPDPDKDPYHGYSGRDIVIENLRQKCIWNHYGGENT-GKEEGVGLPWWGYVREFTEKCSRSSRFTDPNCIKEAMGAA 320          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A7S2UWY7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY7_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.280e-94
Identity = 134/245 (54.69%), Postives = 170/245 (69.39%), Query Frame = 1
Query:  112 PFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEGCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGT-HCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGVERFKDAGCVAAAMSEA 843
            PFILM+DRG+CTF +KVRRAQH GA+ V+++D+KCLCG+  CVS + CE VEPIMADDGSGADI IP++L+KK D++ I   +     V  EM+W++P PDDRVEW LWTS++D  A   K DF ++   LG  AYF PHYM+++G    CTD   HCGNLCTN GRYC+ DPD DR  GLSG D+V ESLRQ CIW+ YG ++A    +G+G  WW+Y       C  + F D  C+ AAM  A
Sbjct:   23 PFILMMDRGDCTFVSKVRRAQHAGAAAVLVSDHKCLCGEAKCVSEQPCESVEPIMADDGSGADIAIPAYLLKKVDSDLIKGIITQGTLVVAEMSWALPNPDDRVEWTLWTSSLDEGAELLKADFLEITKGLGRRAYFVPHYMIFDGVSLRCTDSDDHCGNLCTNEGRYCLPDPDNDRSNGLSGADLVAESLRQLCIWKIYGSQDAEESNRGVGLPWWEYTVHHATDCSPDHFADTACIEAAMHAA 267          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A7S2LZB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZB0_9STRA)

HSP 1 Score: 276 bits (705), Expect = 1.870e-88
Identity = 134/238 (56.30%), Postives = 166/238 (69.75%), Query Frame = 1
Query:   94 IEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEG---CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCT--DGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKC 789
            +EP   P ILMVDRG C+F  KVR AQ  GA+G IIADN CLC DK CVSA G   C+  EPIMADDGSG DI+IPSFLM K DA+ + + L+A Q VQ+EM W++P+PDDRVE++LWT+  DP +  F+++FK V  +LG+HAYF PH  +Y+G    C   DG + C NLCTN GRYC TDPD D D G+SG DVV+ESLR+ CIW+ YG      +  G+G  WWDYV  F  +C
Sbjct:  104 MEPWPSPLILMVDRGGCSFVQKVRNAQKAGAAGAIIADNTCLCSDKDCVSANGQAVCQPAEPIMADDGSGGDISIPSFLMFKVDADQVKAELKANQMVQIEMQWALPSPDDRVEYDLWTTPSDPVSKDFQKNFKAVAQALGSHAYFTPHMYVYDGIKSNCQGFDGENMCFNLCTNNGRYCATDPDNDLDHGISGADVVKESLRRICIWKHYG------ETDGVGSEWWDYVAQFLERC 335          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: B7G5X7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5X7_PHATC)

HSP 1 Score: 281 bits (718), Expect = 5.090e-88
Identity = 136/250 (54.40%), Postives = 169/250 (67.60%), Query Frame = 1
Query:   94 IEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEG---CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGC---TDGTHCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGV-ERFKDAGCV 822
            ++P   PF+LM+DRG CTF  KVR AQH+GASGV+IADN C+C D TC +A     CE  EPIMADDGSGADI+IPSFL+ K DA+ I + ++  + VQ EM WS+P+PDDRVE++LWTS  D  +  F RD+KDV ++LG  AYF PH  L++G   GC       +C  LCTN GRYC TDPD D  +G+SG DVVRESLR+ CIW  YG         G+GR WWDYVN FN +C   + F D  C+
Sbjct:   98 MKPYPSPFLLMMDRGHCTFVQKVRNAQHMGASGVLIADNTCICSDTTCTAANPTAPCEMTEPIMADDGSGADISIPSFLLYKTDADKIIAEVKENRPVQAEMAWSLPSPDDRVEYDLWTSPSDGISAEFIRDWKDVAIALGDKAYFTPHMYLHDGEKSGCHAPNGDNYCFTLCTNAGRYCATDPDDDLTKGISGGDVVRESLRRICIWSHYGAAN------GIGREWWDYVNEFNQRCSAADYFADDACI 341          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A6U3XPN0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3XPN0_9STRA)

HSP 1 Score: 276 bits (705), Expect = 1.920e-87
Identity = 134/238 (56.30%), Postives = 166/238 (69.75%), Query Frame = 1
Query:   94 IEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEG---CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCT--DGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKC 789
            +EP   P ILMVDRG C+F  KVR AQ  GA+G IIADN CLC DK CVSA G   C+  EPIMADDGSG DI+IPSFLM K DA+ + + L+A Q VQ+EM W++P+PDDRVE++LWT+  DP +  F+++FK V  +LG+HAYF PH  +Y+G    C   DG + C NLCTN GRYC TDPD D D G+SG DVV+ESLR+ CIW+ YG      +  G+G  WWDYV  F  +C
Sbjct:    1 MEPWPSPLILMVDRGGCSFVQKVRNAQKAGAAGAIIADNTCLCSDKDCVSANGQAVCQPAEPIMADDGSGGDISIPSFLMFKVDADQVKAELKANQMVQIEMQWALPSPDDRVEYDLWTTPSDPVSKDFQKNFKAVAQALGSHAYFTPHMYVYDGIKSNCQGFDGENMCFNLCTNNGRYCATDPDNDLDHGISGADVVKESLRRICIWKHYG------ETDGVGSEWWDYVAQFLERC 232          
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: B8CDN3_THAPS (PA domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDN3_THAPS)

HSP 1 Score: 273 bits (699), Expect = 1.840e-85
Identity = 133/238 (55.88%), Postives = 165/238 (69.33%), Query Frame = 1
Query:   94 IEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEG---CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCT--DGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKC 789
            +EP   P+ILMVDRG C+F  KVR AQ  GA+GV+IADN CLC DK CVSA G   C+  EPIMADDGSG DI+IPSFLM K DA+ I + L+A   VQVEM W++P PDDRVE++LWT+  DP +  F++ F+ V  +LG  AYF PH  +Y+G    C   DG + C NLCTN GRYC TDPD D D G+SG DVV+ESLR+ CIW+ YG      +  G+G+ WWDYV+ F  +C
Sbjct:   91 MEPWPSPYILMVDRGGCSFVQKVRNAQRSGAAGVVIADNTCLCSDKDCVSANGQDVCQPAEPIMADDGSGGDISIPSFLMFKVDADQIKAELQANHMVQVEMQWALPKPDDRVEYDLWTTPSDPVSKDFQKKFEPVAQALGDRAYFTPHMYIYDGVKSNCQGFDGENMCFNLCTNNGRYCATDPDNDLDHGISGADVVKESLRRICIWKHYG------EADGVGKEWWDYVSQFMERC 322          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNB1_9STRA3.540e-12762.68PA domain-containing protein n=1 Tax=Tribonema min... [more]
A0A836CIN2_9STRA4.750e-11861.19PA domain-containing protein n=1 Tax=Tribonema min... [more]
D8LR61_ECTSI1.040e-11560.96PA domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6V1XHF6_HETAK3.290e-10058.94Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A4D9DEA6_9STRA6.580e-9855.51PA domain-containing protein n=1 Tax=Nannochlorops... [more]
A0A7S2UWY7_9STRA1.280e-9454.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2LZB0_9STRA1.870e-8856.30Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
B7G5X7_PHATC5.090e-8854.40Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6U3XPN0_9STRA1.920e-8756.30Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8CDN3_THAPS1.840e-8555.88PA domain-containing protein n=1 Tax=Thalassiosira... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9151contigP-wetherbeei_contig9151:288..2452 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LR61
Preferred nameVSR1
PFAMsPA,cEGF
Model size843
Max annot lvl2759|Eukaryota
KEGG rclassRC00718
KEGG koko:K01859,ko:K17637
KEGG ReactionR02446,R06556,R07990,R07995
KEGG Pathwayko00941,ko01100,ko01110,ko04014,map00941,map01100,map01110,map04014
KEGG ModuleM00137
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0005048,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005773,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0007034,GO:0008104,GO:0008150,GO:0009940,GO:0010008,GO:0010209,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0030135,GO:0030136,GO:0030659,GO:0030662,GO:0030665,GO:0031090,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098588,GO:0098791,GO:0098805
Exons4
Evalue1.71e-116
EggNOG OGs28KFV@1|root,2QSX2@2759|Eukaryota
EC5.5.1.6
Descriptionamino-terminal vacuolar sorting propeptide binding
Cds size843
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187078.8521338-CDS-P-wetherbeei_contig9151:287..4461683187078.8521338-CDS-P-wetherbeei_contig9151:287..446Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9151 288..446 +
1683187078.8661745-CDS-P-wetherbeei_contig9151:1012..12341683187078.8661745-CDS-P-wetherbeei_contig9151:1012..1234Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9151 1013..1234 +
1683187078.8766754-CDS-P-wetherbeei_contig9151:1611..18851683187078.8766754-CDS-P-wetherbeei_contig9151:1611..1885Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9151 1612..1885 +
1683187078.8893788-CDS-P-wetherbeei_contig9151:2264..24521683187078.8893788-CDS-P-wetherbeei_contig9151:2264..2452Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9151 2265..2452 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9151.1.2prot_P-wetherbeei_contig9151.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9151 288..2452 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9151.1.2

>prot_P-wetherbeei_contig9151.1.2 ID=prot_P-wetherbeei_contig9151.1.2|Name=mRNA_P-wetherbeei_contig9151.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp
QRLVYPGVKFNDQGKPISQPWLLCSDTDANDIEPMADPFILMVDRGECTF
AAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEGCEDVEPIMADDGSGAD
ITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAV
DPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGTHCGNLCTN
GGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGR
AWWDYVNSFNVKCGVERFKDAGCVAAAMSEA
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mRNA from alignment at P-wetherbeei_contig9151:288..2452+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9151.1.2 ID=mRNA_P-wetherbeei_contig9151.1.2|Name=mRNA_P-wetherbeei_contig9151.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2165bp|location=Sequence derived from alignment at P-wetherbeei_contig9151:288..2452+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCGGCTGGTGTATCCGGGGGTGAAGTTCAACGACCAGGGCAAGCCCAT CTCGCAGCCGTGGCTGCTATGCTCCGACACGGACGCCAACGACATTGAAC CAATGGCGGATCCGTTCATCCTCATGGTGGACCGCGGCGAGTGCACCTTC GCCGCCAAGGTGAGCGGGAGAGGTGCTTGAGCAAGTTGTGGGGGCGGGGG GGTACCTGCCGCCCTGGAGAGATGCCTTCTGGGATAATATGTTTTGGCAT TCTTTCAGCATGTATGCTTTCATTTTCTTCCTTATGTTTTGCGAATATGA TACGGCTTCGAACATGCGCCGACGTCTTTTGTATTTGAAGCTGCCAGTTC GGTTTTGATGTCTCAATTTCTGTGTTCTTGTGAACTTCCTTCTCTTGGAG TTGGACCTGGTTCCTCCTTTCTTCTTTTCCAACATGCAGCTTTTGGGTGC GGCGGAAGTACGTGTCCACCTCCTCATGATCCAGCAAGGGATAGCCCGTT ATACGACTCTTCCCACGCTGTTGTGGAGAGCATCGGTTGTATTTCTTTCT TCTGCCGTACCATAAATGACGAAGTTTCCCCGTAGCCATTTTTATTTCCT CGTGGCATGTCAAGAATGACCACTCTCCTGAAACCCTTTTCTCCCTTTTT CCACTGCTTTCGTCTCCCTGGCACACAAATCTTCGAAAACTCCTCTCCGG CGAATCAACCAATCGGAAAAATCAGGTCAGGCGGGCGCAGCACCTGGGTG CGTCGGGCGTCATCATCGCCGACAACAAGTGCCTCTGCGGCGACAAGACA TGCGTATCCGCGGAGGGCTGCGAGGACGTGGAGCCCATCATGGCCGACGA TGGCTCGGGCGCCGACATTACAATTCCCAGCTTCCTGATGAAGAAGCCCG ACGCCGAGGCGATCCACTCGCATTTGGAGGCCAAGCAGTACGTTCAGGTG AGGAAGACTGGGGCCATACACGTTTTTCTGTTCGGTTACGCGGCAGTTGT TTTGTTCCACTCTCTTGTTTCTGTTGCGCCGTCTCTGGGTTGTGGCCGTT TTTGGTAACAACATATTGCTCTTCCAAATTGTTGCAATGGTGACTGACCG GGGTGGTGTCTATGGCAGGCTGGCAGGCGGAAGGGCATATCGGCGGAAGA AGAATCTACCTGCCTTCTGCTTTATCAGTCTTTACTATCCTCCTTTCTCT TCATTTCTTCCGCGCAATCTTCTGTTCTGTGTTTTTCTGGGTAGCTGCCT TGCATTCTAAATCCCGATTTGCTTGTTTGTCACCAACCAATGGCAACTAA ACGACGACTGAAACCTTGAAAAAGGTGGAGATGACGTGGTCGATGCCGGC GCCGGACGACCGCGTTGAGTGGGAGCTCTGGACGTCCGCCGTGGACCCAA CGGCGACTGCCTTCAAGCGCGACTTCAAGGACGTGGTGCTGTCGCTCGGC GCACACGCTTACTTCGAGCCGCACTACATGCTCTACAACGGTTCCGTTTA TGGCTGCACGGATGGTACGCACTGCGGCAACCTGTGCACCAACGGCGGGC GGTACTGCATGACGGACCCGGACCTCGACCGCGACCAGGGCCTGTCAGGT GGGTCGTTGCGGTTGCTGGTTTGGTTCCGTTTTCTTTGGTTGGTCCTCAA AAGGTTCCGGCTCACTTTGGTCATGGCTGTCTGGTCTACCTCCCTGGCCG TGTGATTGGTTTTGCTCTCCATTGCGGTGTGATCAGGGCGTCAATGTACG TCCGTCGCTGTGTAGTTTGTTGGTTTTCTGTTAGCGAAAATTACTCTCTG GCCGTCCTTGTATGTGGAGGCTGCGACCTGCTCCCCTTCCTCTGCAATCC GGGACTTTTATGCTGGGCTGCTGCCGTTGTTATGCCCGCCTGCTGCCGAC TGCCACCGCCTGCCGCCGGCCCGCCGCCGATCTCCCGACCTGGTCTGCGT GGCGATCTGCTCTGCCCGCCTCCACAGGGGAGGACGTGGTGCGGGAATCG CTGCGCCAGAAGTGCATCTGGCAGCGCTACGGCGGCGAAGAGGCGCCGGC CGACGAGAAGGGGCTCGGGCGCGCCTGGTGGGACTATGTCAACTCCTTCA ACGTCAAGTGCGGCGTCGAGCGGTTCAAGGATGCCGGCTGCGTCGCCGCG GCCATGAGTGAGGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9151:288..2452+

>mRNA_P-wetherbeei_contig9151.1.2 ID=mRNA_P-wetherbeei_contig9151.1.2|Name=mRNA_P-wetherbeei_contig9151.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig9151:288..2452+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCGGCTGGTGTATCCGGGGGTGAAGTTCAACGACCAGGGCAAGCCCAT
CTCGCAGCCGTGGCTGCTATGCTCCGACACGGACGCCAACGACATTGAAC
CAATGGCGGATCCGTTCATCCTCATGGTGGACCGCGGCGAGTGCACCTTC
GCCGCCAAGGTCAGGCGGGCGCAGCACCTGGGTGCGTCGGGCGTCATCAT
CGCCGACAACAAGTGCCTCTGCGGCGACAAGACATGCGTATCCGCGGAGG
GCTGCGAGGACGTGGAGCCCATCATGGCCGACGATGGCTCGGGCGCCGAC
ATTACAATTCCCAGCTTCCTGATGAAGAAGCCCGACGCCGAGGCGATCCA
CTCGCATTTGGAGGCCAAGCAGTACGTTCAGGTGGAGATGACGTGGTCGA
TGCCGGCGCCGGACGACCGCGTTGAGTGGGAGCTCTGGACGTCCGCCGTG
GACCCAACGGCGACTGCCTTCAAGCGCGACTTCAAGGACGTGGTGCTGTC
GCTCGGCGCACACGCTTACTTCGAGCCGCACTACATGCTCTACAACGGTT
CCGTTTATGGCTGCACGGATGGTACGCACTGCGGCAACCTGTGCACCAAC
GGCGGGCGGTACTGCATGACGGACCCGGACCTCGACCGCGACCAGGGCCT
GTCAGGGGAGGACGTGGTGCGGGAATCGCTGCGCCAGAAGTGCATCTGGC
AGCGCTACGGCGGCGAAGAGGCGCCGGCCGACGAGAAGGGGCTCGGGCGC
GCCTGGTGGGACTATGTCAACTCCTTCAACGTCAAGTGCGGCGTCGAGCG
GTTCAAGGATGCCGGCTGCGTCGCCGCGGCCATGAGTGAGGCA
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