mRNA_P-wetherbeei_contig9151.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A835YNB1_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB1_9STRA) HSP 1 Score: 380 bits (977), Expect = 3.540e-127 Identity = 178/284 (62.68%), Postives = 216/284 (76.06%), Query Frame = 1 Query: 1 QRLVYPGVKFNDQGKPISQPWLLCSDTDANDIEPMADPFILMVDRG--ECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEGCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGT-HCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGVERFKDAGCVAAAMSEA 843 QRLVYPG + D P+ LCSD++A+ A PFIL+VDRG +CTF +KVRRAQHLGA+GVII D++C+CGD C SA C+ VEPIMADDGSGADITIPSFLM K D I SHL+A Q++Q EMTWS+PAPDDRVEW LWTSA D ATAFK +F+DVV +LG HAYF PHY++Y+G YGC D T HCGNLCTN GRYC DPD DRD GLSG D+++E+LRQKCIW YGG++A E+G+G WW YV +F+ KCG+ +F D+ C++ AMSEA Sbjct: 59 QRLVYPG-NYTD-------PYTLCSDSEADKFVNPAQPFILLVDRGGQDCTFVSKVRRAQHLGAAGVIIVDDRCICGDGACASAVACQPVEPIMADDGSGADITIPSFLMTKMDGNIIKSHLQANQFIQAEMTWSLPAPDDRVEWSLWTSAQDSAATAFKAEFRDVVTALGTHAYFTPHYIVYDGEEYGCRDDTNHCGNLCTNAGRYCNPDPDFDRDSGLSGADIIQETLRQKCIWLHYGGDKASKGEQGIGERWWTYVQTFSKKCGMGKFVDSSCISRAMSEA 334
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A836CIN2_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN2_9STRA) HSP 1 Score: 359 bits (921), Expect = 4.750e-118 Identity = 175/286 (61.19%), Postives = 206/286 (72.03%), Query Frame = 1 Query: 1 QRLVYPGVKFNDQGKPISQPWLLCSDTDANDI-EPMAD-PFILMVDRG--ECTFAAKVRRAQHLGASGVIIADNKCLC-GDKTCVSAEGCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGVERFKDAGCVAAAMSE 840 QRLVYPG QP+ LCSD DA P + PFIL+VDRG +CTF +KVRRAQHLGA+G IIAD++C C GD C S+ CE +EPIMADDGSGADITIPSFLM K D + I HL+ K+++QVEMTWS+PAPDDRVEW LWT+A+D A AFK + DV +LG HA+F PHY +Y+G YGC D TH CGNLCTN GRYC DPD DRD GLSG DV+RE+LRQKCIW YGG +AP ++G+G WW YVN F C ++F D CVAAAMSE Sbjct: 41 QRLVYPGD--------FDQPYQLCSDVDAAKFTNPNPNQPFILLVDRGGADCTFVSKVRRAQHLGAAGAIIADDRCKCAGDAQCDSSVACEQLEPIMADDGSGADITIPSFLMTKTDGDLIKEHLKLKEFLQVEMTWSLPAPDDRVEWSLWTTAIDAAAAAFKGEMADVAAALGTHAFFTPHYTIYDGEEYGCRDDTHHCGNLCTNAGRYCNPDPDFDRDSGLSGADVIRETLRQKCIWLHYGGAQAPEADQGVGIKWWSYVNKFTTLCNTDKFTDETCVAAAMSE 318
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: D8LR61_ECTSI (PA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR61_ECTSI) HSP 1 Score: 352 bits (902), Expect = 1.040e-115 Identity = 178/292 (60.96%), Postives = 208/292 (71.23%), Query Frame = 1 Query: 1 QRLVYPGVKFNDQGKPISQPWLLCSDTDANDIE--PMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKT---CVSAEG--CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDG--THCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGVE--RFKDAGCVAAAMSEA 843 +R+V+ GV D G+ + + W LCSD D D+ P PFILMVDRG+CTFA+KVR+AQH+GA GVIIADN CLC D+ C + CE VEPIMADDGSG DITIPSFLMKK DA I + LE Q VQ EMTWS+PAPDDRVEW LWTSA+D +A FKRDFK+VV +LG A F P+Y++YNG YGCT G +CG+LCTN GRYCMTDPD D G+SG DVVRESLRQKC+W YGGE+AP ++G+G WW YVN F C V RF D CVA AM A Sbjct: 65 ERIVHGGV---DPGQSV-RTWTLCSDDDVKDVPMVPTDSPFILMVDRGDCTFASKVRKAQHMGAIGVIIADNTCLCKDEASGICNKSGDTPCEQVEPIMADDGSGGDITIPSFLMKKMDATLIKNRLEGGQSVQAEMTWSLPAPDDRVEWSLWTSAMDTSAAPFKRDFKEVVKTLGKSAQFTPYYVVYNGDSYGCTGGGANNCGSLCTNDGRYCMTDPDFDTKAGVSGADVVRESLRQKCVWNTYGGEDAPLADQGVGEKWWSYVNEFFSSCSVSGNRFNDENCVARAMKAA 352
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A6V1XHF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XHF6_HETAK) HSP 1 Score: 311 bits (797), Expect = 3.290e-100 Identity = 145/246 (58.94%), Postives = 177/246 (71.95%), Query Frame = 1 Query: 112 PFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEGCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGV-ERFKDAGCVAAAMSEA 843 PFILM DRG+CTF +KVRRAQH GA+GV+IADNKCLCGD C S E CE +EPIMADDGSGADITIP+FLMKK DA+ + + Q V EM+W++P PDDRVEW+LWT+A+D A FK+DF+ V LG AYF PHY++Y+G+ CT + CGNLCTN GRYC+ DPD DR +G+SG DVV E+LRQ CIW+ YGG+ A + G+G WW YVN F C E+F A C A M +A Sbjct: 93 PFILMADRGDCTFVSKVRRAQHAGAAGVLIADNKCLCGDAACTSQEACEPLEPIMADDGSGADITIPAFLMKKVDADLVKGQILQGQLVVAEMSWALPNPDDRVEWDLWTTAIDDGAQTFKQDFEVVTSKLGPRAYFTPHYVVYDGNELRCTTASDKCGNLCTNQGRYCLPDPDNDRHKGISGADVVEENLRQLCIWRAYGGDAANQADIGVGTKWWRYVNGFQAACNTPEKFASAACKANVMKQA 338
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A4D9DEA6_9STRA (PA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEA6_9STRA) HSP 1 Score: 306 bits (783), Expect = 6.580e-98 Identity = 146/263 (55.51%), Postives = 178/263 (67.68%), Query Frame = 1 Query: 67 LCSDTDANDIEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAE--GCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTD-GTHCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCG-VERFKDAGCVAAAMSEA 843 +CS A+++ P+ILMVDRG+CTF KVR AQH GASGV++ADN C+C D C C+ +EPIMADDGSGADITIPSFL+ KPDA+AI L + VQVEMTWS+P PDDRVEW LWTSA D ++ A K +FK+ + +LG H YF P+Y +Y+G+ Y C + HCG+LCTN GRYCM DPD D G SG D+V E+LRQKCIW YGGE E+G+G WW YV F KC RF D C+ AM A Sbjct: 59 MCSAPTADEVAQWKSPYILMVDRGDCTFVTKVRHAQHAGASGVLVADNLCVCKDLACHPDPDTSCQGIEPIMADDGSGADITIPSFLLYKPDADAIKEKLRQESLVQVEMTWSLPTPDDRVEWSLWTSANDSSSAALKEEFKEAMAALGQHQYFTPYYQVYDGAAYNCVNFPDHCGSLCTNHGRYCMPDPDKDPYHGYSGRDIVIENLRQKCIWNHYGGENT-GKEEGVGLPWWGYVREFTEKCSRSSRFTDPNCIKEAMGAA 320
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A7S2UWY7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY7_9STRA) HSP 1 Score: 295 bits (754), Expect = 1.280e-94 Identity = 134/245 (54.69%), Postives = 170/245 (69.39%), Query Frame = 1 Query: 112 PFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEGCEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCTDGT-HCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGVERFKDAGCVAAAMSEA 843 PFILM+DRG+CTF +KVRRAQH GA+ V+++D+KCLCG+ CVS + CE VEPIMADDGSGADI IP++L+KK D++ I + V EM+W++P PDDRVEW LWTS++D A K DF ++ LG AYF PHYM+++G CTD HCGNLCTN GRYC+ DPD DR GLSG D+V ESLRQ CIW+ YG ++A +G+G WW+Y C + F D C+ AAM A Sbjct: 23 PFILMMDRGDCTFVSKVRRAQHAGAAAVLVSDHKCLCGEAKCVSEQPCESVEPIMADDGSGADIAIPAYLLKKVDSDLIKGIITQGTLVVAEMSWALPNPDDRVEWTLWTSSLDEGAELLKADFLEITKGLGRRAYFVPHYMIFDGVSLRCTDSDDHCGNLCTNEGRYCLPDPDNDRSNGLSGADLVAESLRQLCIWKIYGSQDAEESNRGVGLPWWEYTVHHATDCSPDHFADTACIEAAMHAA 267
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A7S2LZB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZB0_9STRA) HSP 1 Score: 276 bits (705), Expect = 1.870e-88 Identity = 134/238 (56.30%), Postives = 166/238 (69.75%), Query Frame = 1 Query: 94 IEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEG---CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCT--DGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKC 789 +EP P ILMVDRG C+F KVR AQ GA+G IIADN CLC DK CVSA G C+ EPIMADDGSG DI+IPSFLM K DA+ + + L+A Q VQ+EM W++P+PDDRVE++LWT+ DP + F+++FK V +LG+HAYF PH +Y+G C DG + C NLCTN GRYC TDPD D D G+SG DVV+ESLR+ CIW+ YG + G+G WWDYV F +C Sbjct: 104 MEPWPSPLILMVDRGGCSFVQKVRNAQKAGAAGAIIADNTCLCSDKDCVSANGQAVCQPAEPIMADDGSGGDISIPSFLMFKVDADQVKAELKANQMVQIEMQWALPSPDDRVEYDLWTTPSDPVSKDFQKNFKAVAQALGSHAYFTPHMYVYDGIKSNCQGFDGENMCFNLCTNNGRYCATDPDNDLDHGISGADVVKESLRRICIWKHYG------ETDGVGSEWWDYVAQFLERC 335
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: B7G5X7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5X7_PHATC) HSP 1 Score: 281 bits (718), Expect = 5.090e-88 Identity = 136/250 (54.40%), Postives = 169/250 (67.60%), Query Frame = 1 Query: 94 IEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEG---CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGC---TDGTHCGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKCGV-ERFKDAGCV 822 ++P PF+LM+DRG CTF KVR AQH+GASGV+IADN C+C D TC +A CE EPIMADDGSGADI+IPSFL+ K DA+ I + ++ + VQ EM WS+P+PDDRVE++LWTS D + F RD+KDV ++LG AYF PH L++G GC +C LCTN GRYC TDPD D +G+SG DVVRESLR+ CIW YG G+GR WWDYVN FN +C + F D C+ Sbjct: 98 MKPYPSPFLLMMDRGHCTFVQKVRNAQHMGASGVLIADNTCICSDTTCTAANPTAPCEMTEPIMADDGSGADISIPSFLLYKTDADKIIAEVKENRPVQAEMAWSLPSPDDRVEYDLWTSPSDGISAEFIRDWKDVAIALGDKAYFTPHMYLHDGEKSGCHAPNGDNYCFTLCTNAGRYCATDPDDDLTKGISGGDVVRESLRRICIWSHYGAAN------GIGREWWDYVNEFNQRCSAADYFADDACI 341
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: A0A6U3XPN0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3XPN0_9STRA) HSP 1 Score: 276 bits (705), Expect = 1.920e-87 Identity = 134/238 (56.30%), Postives = 166/238 (69.75%), Query Frame = 1 Query: 94 IEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEG---CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCT--DGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKC 789 +EP P ILMVDRG C+F KVR AQ GA+G IIADN CLC DK CVSA G C+ EPIMADDGSG DI+IPSFLM K DA+ + + L+A Q VQ+EM W++P+PDDRVE++LWT+ DP + F+++FK V +LG+HAYF PH +Y+G C DG + C NLCTN GRYC TDPD D D G+SG DVV+ESLR+ CIW+ YG + G+G WWDYV F +C Sbjct: 1 MEPWPSPLILMVDRGGCSFVQKVRNAQKAGAAGAIIADNTCLCSDKDCVSANGQAVCQPAEPIMADDGSGGDISIPSFLMFKVDADQVKAELKANQMVQIEMQWALPSPDDRVEYDLWTTPSDPVSKDFQKNFKAVAQALGSHAYFTPHMYVYDGIKSNCQGFDGENMCFNLCTNNGRYCATDPDNDLDHGISGADVVKESLRRICIWKHYG------ETDGVGSEWWDYVAQFLERC 232
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Match: B8CDN3_THAPS (PA domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDN3_THAPS) HSP 1 Score: 273 bits (699), Expect = 1.840e-85 Identity = 133/238 (55.88%), Postives = 165/238 (69.33%), Query Frame = 1 Query: 94 IEPMADPFILMVDRGECTFAAKVRRAQHLGASGVIIADNKCLCGDKTCVSAEG---CEDVEPIMADDGSGADITIPSFLMKKPDAEAIHSHLEAKQYVQVEMTWSMPAPDDRVEWELWTSAVDPTATAFKRDFKDVVLSLGAHAYFEPHYMLYNGSVYGCT--DGTH-CGNLCTNGGRYCMTDPDLDRDQGLSGEDVVRESLRQKCIWQRYGGEEAPADEKGLGRAWWDYVNSFNVKC 789 +EP P+ILMVDRG C+F KVR AQ GA+GV+IADN CLC DK CVSA G C+ EPIMADDGSG DI+IPSFLM K DA+ I + L+A VQVEM W++P PDDRVE++LWT+ DP + F++ F+ V +LG AYF PH +Y+G C DG + C NLCTN GRYC TDPD D D G+SG DVV+ESLR+ CIW+ YG + G+G+ WWDYV+ F +C Sbjct: 91 MEPWPSPYILMVDRGGCSFVQKVRNAQRSGAAGVVIADNTCLCSDKDCVSANGQDVCQPAEPIMADDGSGGDISIPSFLMFKVDADQIKAELQANHMVQVEMQWALPKPDDRVEYDLWTTPSDPVSKDFQKKFEPVAQALGDRAYFTPHMYIYDGVKSNCQGFDGENMCFNLCTNNGRYCATDPDNDLDHGISGADVVKESLRRICIWKHYG------EADGVGKEWWDYVSQFMERC 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9151.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9151.1.2 >prot_P-wetherbeei_contig9151.1.2 ID=prot_P-wetherbeei_contig9151.1.2|Name=mRNA_P-wetherbeei_contig9151.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp QRLVYPGVKFNDQGKPISQPWLLCSDTDANDIEPMADPFILMVDRGECTFback to top mRNA from alignment at P-wetherbeei_contig9151:288..2452+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9151.1.2 ID=mRNA_P-wetherbeei_contig9151.1.2|Name=mRNA_P-wetherbeei_contig9151.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2165bp|location=Sequence derived from alignment at P-wetherbeei_contig9151:288..2452+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9151:288..2452+ >mRNA_P-wetherbeei_contig9151.1.2 ID=mRNA_P-wetherbeei_contig9151.1.2|Name=mRNA_P-wetherbeei_contig9151.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig9151:288..2452+ (Phaeothamnion wetherbeei SAG_119_79)back to top |