mRNA_P-wetherbeei_contig9146.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9146.1.1
Unique NamemRNA_P-wetherbeei_contig9146.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: D7FTH9_ECTSI (Diphosphomevalonate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH9_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 2.420e-142
Identity = 206/263 (78.33%), Postives = 233/263 (88.59%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798
            QDDL+AITTVAASK F +D+LWLNGTEEDV+ N+RFQAVI QV+ALA+ + DE TGEV+V   DW  Y+V IASRNTFPTAAGLASSAAGLACLTF+LA+LFNA+ESF GEL++IARQGSGSACRSLYGGFVKW KGVR DARDSIAVQVADE HWPE+RA+ILVVSADKK TSST GM  SV TSPLL FRA+EVVEPRL E+E AYL +DFA FG++TM DSNQFHATCLDTYPPIFYMND+SR+V+R VHAYN +HGE+R
Sbjct:   46 QDDLRAITTVAASKDFEKDQLWLNGTEEDVSKNKRFQAVIRQVRALATEKRDEATGEVVVAEGDWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLAKLFNAKESFDGELSSIARQGSGSACRSLYGGFVKWQKGVREDARDSIAVQVADEHHWPEMRALILVVSADKKDTSSTSGMSTSVQTSPLLGFRAKEVVEPRLAEIEKAYLEKDFATFGKITMQDSNQFHATCLDTYPPIFYMNDVSRSVIRIVHAYNAFHGEIR 308          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A835YQZ6_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ6_9STRA)

HSP 1 Score: 382 bits (982), Expect = 6.970e-129
Identity = 198/263 (75.29%), Postives = 218/263 (82.89%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798
            QDDLKAITTVAAS+SFS+DRLWLNG EEDV  N+R   VI  V+ALA ++VD  TGEVLV  +DW  Y VHIASRNTFPTAAGLASSAAG ACLTFALAQLF A E++ GELTAIARQGSGSACRSLYGGFV+W KG R DA DSIAVQVADE HWPELRA+I V SA KK TSST GM  SV TS LL  RA  +VEPRL  +EAAYL RDFA FGR TM+DSNQFHATCLDTYPPIFYMND+SRA+V+AVHA+N +HG +R
Sbjct:   45 QDDLKAITTVAASRSFSKDRLWLNGKEEDVESNKRLTTVIKLVRALAGDKVDAKTGEVLVYKADWPQYHVHIASRNTFPTAAGLASSAAGYACLTFALAQLFAACETYDGELTAIARQGSGSACRSLYGGFVRWQKGERADAADSIAVQVADEAHWPELRALIFVASAAKKGTSSTSGMGTSVATSELLRHRAAALVEPRLAAIEAAYLARDFAGFGRATMVDSNQFHATCLDTYPPIFYMNDVSRALVQAVHAFNAHHGAIR 307          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7R9UJI1_DIALT (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UJI1_DIALT)

HSP 1 Score: 341 bits (875), Expect = 2.240e-114
Identity = 173/266 (65.04%), Postives = 207/266 (77.82%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGN----RRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEV 795
            QDDL A+T++AAS  F  DRLWLNG EED AGN    +R +  + +++ LA +RVD  +G V+  A++   YKVH+ SRNTFPTAAGLASSAAG ACL   LA+L+N  E++ G+L+ IARQGSGSACRSLYGGFVKWVKG +PDA DS+AV VAD+ HWPELRAVILV++A KK T ST GM  SV TSPLLAFRA  VVEPRL  MEAAY  RDF AFG+LTM DSNQFHATCLDTYPPIFY+ND+SR  +R  HA+N++ G +
Sbjct:   48 QDDLCAMTSIAASSDFVADRLWLNGKEEDTAGNGTHAKRLRKCLAEMRGLARDRVDA-SGAVVCTATELASYKVHVVSRNTFPTAAGLASSAAGYACLVHTLAKLYNVEEAYEGQLSTIARQGSGSACRSLYGGFVKWVKGRKPDATDSMAVCVADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLNDVSRQAIRLCHAFNEHKGRI 312          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7R9ULP1_DIALT (Diphosphomevalonate decarboxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9ULP1_DIALT)

HSP 1 Score: 341 bits (875), Expect = 8.400e-113
Identity = 173/266 (65.04%), Postives = 207/266 (77.82%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGN----RRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEV 795
            QDDL A+T++AAS  F  DRLWLNG EED AGN    +R +  + +++ LA +RVD  +G V+  A++   YKVH+ SRNTFPTAAGLASSAAG ACL   LA+L+N  E++ G+L+ IARQGSGSACRSLYGGFVKWVKG +PDA DS+AV VAD+ HWPELRAVILV++A KK T ST GM  SV TSPLLAFRA  VVEPRL  MEAAY  RDF AFG+LTM DSNQFHATCLDTYPPIFY+ND+SR  +R  HA+N++ G +
Sbjct:   48 QDDLCAMTSIAASSDFVADRLWLNGKEEDTAGNGTHAKRLRKCLAEMRGLARDRVDA-SGAVVCTATELASYKVHVVSRNTFPTAAGLASSAAGYACLVHTLAKLYNVEEAYEGQLSTIARQGSGSACRSLYGGFVKWVKGRKPDATDSMAVCVADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLNDVSRQAIRLCHAFNEHKGRI 312          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: B8BS75_THAPS (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS75_THAPS)

HSP 1 Score: 325 bits (834), Expect = 3.040e-108
Identity = 170/265 (64.15%), Postives = 209/265 (78.87%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVA-GNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKW-VKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798
            Q DL+A+TT AAS SF++DRLWLNG+EE  A  ++RF+A I  ++ALA+++VD  T EV+V  S W    VH+AS NTFPTAAGLASSAAG A L  +L +L+NA+ES+PGE TAIARQGSGSACRSLYGGFV W   G++ D  DSIA QVADE HW E+RAVILVVS  KK TSSTVGM+ SV TS LLA RA+E+V  R++ +E A   +DF AFG++TMMDSNQFHATCLDTYPPIFYMND+SR+V++ V  YN++ GE+R
Sbjct:   39 QSDLRAVTTAAASTSFTKDRLWLNGSEEANAFTSKRFRACIDGLRALATDKVDPTTNEVIVSKSQWQSMHVHVASYNTFPTAAGLASSAAGYAALVASLVELYNAKESYPGEFTAIARQGSGSACRSLYGGFVAWRAGGMKEDWSDSIAEQVADEMHWKEMRAVILVVSDAKKETSSTVGMETSVATSELLAHRAKEIVPKRMKIIEDAIQAKDFEAFGKVTMMDSNQFHATCLDTYPPIFYMNDVSRSVIQMVTRYNEWAGEIR 303          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7S4J2Z5_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J2Z5_9STRA)

HSP 1 Score: 328 bits (840), Expect = 4.320e-108
Identity = 172/265 (64.91%), Postives = 207/265 (78.11%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAG-NRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKW-VKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798
            Q DL+A+TT +AS SF+ DRLWLNG EE+ A  ++RF+A +  V+ LA++RVD  TGEV+V   +W    VHIAS NTFPTAAGLASSAAG A L  ALA+LFNA+E++PGELTAIARQGSGSACRSLYGGFV W + G   D  DSIA QVA E HWPE+RAVI+VVS  KK TSST GM  SV TS LLA RA+EVV  R+  +E A+L +DF +FG +TM DSNQFHATCLDT+PPIFYMNDISR++++ VHAYN + GE+R
Sbjct:   49 QSDLRAVTTASASMSFNSDRLWLNGAEEEGACLSKRFRACVDGVRRLANDRVDPKTGEVVVTKDEWADMHVHIASYNTFPTAAGLASSAAGYAALVAALAKLFNAKETYPGELTAIARQGSGSACRSLYGGFVAWRMGGQAEDWSDSIAEQVASESHWPEIRAVIMVVSDAKKDTSSTAGMSTSVKTSKLLAHRAKEVVPERMAAIEKAWLEKDFESFGNITMADSNQFHATCLDTFPPIFYMNDISRSIIQIVHAYNFWAGEIR 313          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A3G5BBY8_HASOS (Diphosphomevalonate decarboxylase n=1 Tax=Haslea ostrearia TaxID=67476 RepID=A0A3G5BBY8_HASOS)

HSP 1 Score: 325 bits (832), Expect = 5.460e-107
Identity = 168/265 (63.40%), Postives = 204/265 (76.98%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEED-VAGNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGV-RPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798
            Q DLKA+TT AAS SF +DRLWLNG EE+  A N+RF+A +  V ALA+++VD  TGEVLV+  DW    VHI+S NTFPTAAGLASSAAG A L  A+  L  A+E +PG+ + IARQGSGSACRSLYGGFV W KG  +PD  DS+A QVADE HWPE+RAVI+VVS +KK TSST GM  SV TS LL  RA  VV  R++ +E A+L +DF +FG+LTM DSNQFHATCLDTYPPIFYMND+S++++R +HAYN + GE+R
Sbjct:   44 QADLKAVTTAAASLSFEKDRLWLNGVEEEGAAENKRFRACVDGVMALATDKVDPKTGEVLVKKEDWKKMHVHISSYNTFPTAAGLASSAAGYAALVAAMMFLVGAKEEYPGQFSTIARQGSGSACRSLYGGFVAWRKGGDKPDWSDSMAQQVADENHWPEIRAVIMVVSDEKKDTSSTSGMSTSVATSELLKHRAANVVSKRMEAIEKAFLAKDFESFGQLTMADSNQFHATCLDTYPPIFYMNDVSKSIIRILHAYNAWAGELR 308          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7S1ZIN1_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIN1_9STRA)

HSP 1 Score: 322 bits (826), Expect = 6.220e-106
Identity = 166/265 (62.64%), Postives = 209/265 (78.87%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAG-NRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKW-VKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798
            Q DL+A+TT +A  +++ DRLWLNG EE+ A  ++RF+A +  VK LAS+R+D  TG+V+V+  DW    V I+S NTFPTAAGLASSAAG A L FALA+LF A+E++PGEL+ IARQGSGSACRSLYGGFV W + G++ D  DS+A QVA E HWPE+RA+ILVVS  KK TSST GM  SV TS LLA RA+EVV  R++E+E A+L +DF++F ++TM DSNQFHATCLDTYPPIFYMND+S++V+R VHAYN + GE R
Sbjct:   51 QTDLRAVTTASACTAYTTDRLWLNGAEEENASTSKRFRACVDGVKRLASDRIDPTTGDVVVKKEDWDTMHVRISSYNTFPTAAGLASSAAGYAALVFALAKLFCAKETYPGELSVIARQGSGSACRSLYGGFVAWRMGGLKEDWTDSLAEQVAPETHWPEIRALILVVSDAKKDTSSTSGMSTSVATSLLLAHRAKEVVPKRMEEIEKAWLAKDFSSFAKITMADSNQFHATCLDTYPPIFYMNDVSKSVIRIVHAYNAWAGEER 315          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A6G0XPY7_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPY7_9STRA)

HSP 1 Score: 316 bits (810), Expect = 7.250e-104
Identity = 157/263 (59.70%), Postives = 200/263 (76.05%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798
            QD LK +T++ ASK F+ DR+WLNG E+++  N+R Q V+ +++ LAS++  +  G  + +A DW  YK+HI S NTFPTAAGLASSAAG ACL  ALA+LF A E + G+ +AIARQGSGSACRSL+GGFV+W KG + D  DS+A+Q+AD EHWPEL A+I VV+  +K TSST GM  S  TS LL FRAREVV+ RL  +EAAY   DF  FG++TMMDSNQFHATCLDTYPPIFYMN+ISR+++  VH YND  G+++
Sbjct:   39 QDQLKTVTSIVASKDFTDDRIWLNGAEQNIQ-NKRIQVVLKEMRRLASDKAVDQDGNTIAKA-DWNNYKLHIVSINTFPTAAGLASSAAGYACLVAALAELFAAEEEYEGQFSAIARQGSGSACRSLHGGFVRWDKGSKVDGSDSLAIQIADHEHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSELLGFRAREVVDKRLAAIEAAYKAMDFETFGKITMMDSNQFHATCLDTYPPIFYMNEISRSIIHLVHKYNDNAGKIQ 299          
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7S2RMS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMS8_9STRA)

HSP 1 Score: 320 bits (820), Expect = 9.650e-104
Identity = 166/270 (61.48%), Postives = 206/270 (76.30%), Query Frame = 1
Query:   10 QDDLKAITTVAASKSFSRDRLWLNGTE---EDVAGN---RRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRP-DARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798
            QDDL+AITTV ASK FS DRLWLNG E    DV+ N   +RFQ  + +++ LA +R+D  TG+VLV   DW  Y++H+ SRNTFPTAAGLASSAAG ACL FAL++LF  + S   +++ IARQGSGSACRSL+GGFVKW +G    + +DS AV VA +E W ++  VILV +  KK TSST GM+ SV TSPLLAFRAREVV+ RL  +E AY  R+F+ FG+LTM DSNQFHATCLDTYPPIFY+ND+SR ++R VHA+NDY+GE+R
Sbjct:   45 QDDLRAITTVVASKDFSSDRLWLNGEELDINDVSKNSHAKRFQTCLLEMRKLAEDRIDPNTGDVLVRKEDWSQYRIHVVSRNTFPTAAGLASSAAGYACLVFALSKLFQVKASLS-DISVIARQGSGSACRSLFGGFVKWEQGTAAANWQDSRAVPVASKEDWEDMATVILVANDKKKDTSSTSGMNTSVETSPLLAFRAREVVDGRLAAIEKAYRARNFSEFGQLTMADSNQFHATCLDTYPPIFYLNDVSRQIIRLVHAFNDYYGEIR 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTH9_ECTSI2.420e-14278.33Diphosphomevalonate decarboxylase n=2 Tax=Ectocarp... [more]
A0A835YQZ6_9STRA6.970e-12975.29Diphosphomevalonate decarboxylase n=1 Tax=Tribonem... [more]
A0A7R9UJI1_DIALT2.240e-11465.04Diphosphomevalonate decarboxylase (Fragment) n=1 T... [more]
A0A7R9ULP1_DIALT8.400e-11365.04Diphosphomevalonate decarboxylase n=2 Tax=Diacrone... [more]
B8BS75_THAPS3.040e-10864.15Diphosphomevalonate decarboxylase (Fragment) n=1 T... [more]
A0A7S4J2Z5_9STRA4.320e-10864.91Diphosphomevalonate decarboxylase n=1 Tax=Odontell... [more]
A0A3G5BBY8_HASOS5.460e-10763.40Diphosphomevalonate decarboxylase n=1 Tax=Haslea o... [more]
A0A7S1ZIN1_9STRA6.220e-10662.64Diphosphomevalonate decarboxylase n=1 Tax=Ditylum ... [more]
A0A6G0XPY7_9STRA7.250e-10459.70Diphosphomevalonate decarboxylase n=1 Tax=Aphanomy... [more]
A0A7S2RMS8_9STRA9.650e-10461.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9146contigP-wetherbeei_contig9146:13..2325 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FTH9
Preferred nameMVD
PFAMsGHMP_kinases_N
Model size798
Max annot lvl2759|Eukaryota
KEGG rclassRC00453
KEGG koko:K01597
KEGG ReactionR01121
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004163,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006066,GO:0006084,GO:0006139,GO:0006163,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006489,GO:0006490,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006695,GO:0006696,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008204,GO:0008284,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009889,GO:0009987,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016829,GO:0016830,GO:0016831,GO:0019216,GO:0019218,GO:0019222,GO:0019287,GO:0019538,GO:0019637,GO:0019693,GO:0030544,GO:0031072,GO:0031907,GO:0031974,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034645,GO:0035383,GO:0036211,GO:0042127,GO:0042221,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043603,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045540,GO:0046165,GO:0046465,GO:0046483,GO:0046490,GO:0046890,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051186,GO:0055086,GO:0062012,GO:0065007,GO:0070013,GO:0070085,GO:0071704,GO:0072521,GO:0080090,GO:0090181,GO:0090407,GO:0097384,GO:0106118,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
Exons6
Evalue3.97e-143
EggNOG OGsCOG3407@1|root,KOG2833@2759|Eukaryota
Ec32 ortholog descriptionDiphosphomevalonate decarboxylase
Ec32 orthologEc-21_001440.1
EC4.1.1.33
Descriptiondiphosphomevalonate decarboxylase activity
Cds size798
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9146.1.1prot_P-wetherbeei_contig9146.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9146 13..2325 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187078.4356823-CDS-P-wetherbeei_contig9146:12..2161683187078.4356823-CDS-P-wetherbeei_contig9146:12..216Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9146 13..216 -
1683187078.448455-CDS-P-wetherbeei_contig9146:670..8081683187078.448455-CDS-P-wetherbeei_contig9146:670..808Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9146 671..808 -
1683187078.4584236-CDS-P-wetherbeei_contig9146:1008..10781683187078.4584236-CDS-P-wetherbeei_contig9146:1008..1078Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9146 1009..1078 -
1683187078.4685476-CDS-P-wetherbeei_contig9146:1374..15441683187078.4685476-CDS-P-wetherbeei_contig9146:1374..1544Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9146 1375..1544 -
1683187078.4792078-CDS-P-wetherbeei_contig9146:1777..18731683187078.4792078-CDS-P-wetherbeei_contig9146:1777..1873Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9146 1778..1873 -
1683187078.4898536-CDS-P-wetherbeei_contig9146:2205..23251683187078.4898536-CDS-P-wetherbeei_contig9146:2205..2325Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9146 2206..2325 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9146.1.1

>prot_P-wetherbeei_contig9146.1.1 ID=prot_P-wetherbeei_contig9146.1.1|Name=mRNA_P-wetherbeei_contig9146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
MYLQDDLKAITTVAASKSFSRDRLWLNGTEEDVAGNRRFQAVITQVKALA
SNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFA
LAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIA
VQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVV
EPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRA
VVRAVHAYNDYHGEVR
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mRNA from alignment at P-wetherbeei_contig9146:13..2325-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9146.1.1 ID=mRNA_P-wetherbeei_contig9146.1.1|Name=mRNA_P-wetherbeei_contig9146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2313bp|location=Sequence derived from alignment at P-wetherbeei_contig9146:13..2325- (Phaeothamnion wetherbeei SAG_119_79)
ATGTATCTGCAGGATGACCTGAAGGCCATCACGACGGTGGCGGCCAGCAA GAGCTTCTCCCGGGACCGCTTGTGGCTCAATGGCACGGAGGAGGATGTCG CGGGGAACCGACGGTTCCAGGTGGGTCCCGCTGCGCATCCGCTGCCGCCC TGCACGTCGCCGTCAGTCGTTGCGTCGCGGTTGGACAGACGAGCAATACG AGATTAGCTGCATTCATTCTGCCTTTCTTGCTGTAGCTGTGGCGGAACCG GGGTTGTAAAGGCGGGCGGGGCGATTGCCGTCGCCTGCCTCTGATTAACC TGGGGCGCAAACCGCTTTTGCTGCGGGCTTTCGCACCAGCTCGACGCTCG TTTGCGAGTCCCTGCCGGCTTTCTTCGTCTCGTACTTTTTGTCGACGCCC TTCTCTTTATTTCCATTTCTCCTGCCTCCCTTTGCACGCCGAGCTCCCGC AGGCGGTGATCACACAGGTGAAGGCGCTGGCGTCGAACCGCGTGGACGAG ATGACGGGCGAGGTGCTGGTGGAGGCGTCCGATTGGGGCTTGTACAAGGT GAGGCTTTCCTGCGTTGTAAGAGGGCCGCCGCCTGCTGCCGCGGCTTTCG TAGCCCGCTACCAGGACGGTCTCGTTTTTGCCTTGTTTTTCTGGTTATTG AGAACTGCGCTCGTCTGCGTGGCGCGACCTCCTTCAACCGTTTCACTTCC TAGCTCTCAACCCTCCTCTCGTTTTCCGTTCCTTTCAAAATACTGCACGT TTGGTCGTCGGGAGCTCCCCCCTTTCTGCAGGTGCACATCGCGTCCCGCA ACACGTTCCCGACGGCTGCGGGGCTGGCGTCGTCGGCGGCGGGGTTGGCG TGCCTCACCTTCGCGCTGGCGCAGCTCTTCAATGCCCGCGAGAGCTTCCC GGGGGAGCTGACGGCCATCGCGCGGCAGGGGTCGGGCAGCGCGTGTCGCA GGTGCGTTGGGGATTGGTCGTTCGAGGAGTCAGTTTTCTTTCGTGTTCTT TCTGCAGCCTTCGCTTCGGCCCTATCGTCGCCTTGTTGAATGGAGGCCCT AAAATAGTTGGTACGGAGCCCGCCCTTCGATGTTGTGGCCCGTCCTGTCT TCCAGCGCATCTTAAGGCCGGGTATCATCACTTCCCACCAGGCCAGCAAC TCGACTCATGCTGAAATCCTCTCCCACTCATGCCGGACTGCCATCGCTAT ATACCGCCTCCAATGCTTATGTCATCTCTGATCTTGCGCCGCGCCAGCTT GTACGGCGGCTTCGTTAAGTGGGTCAAAGGAGTCCGGCCCGACGCCAGAG ACAGCATTGCGGTGCAGGTAAAGACATCTTCCTCGTTTCTGCTTTCTTCT TTCTCAAGATCCCGCTTCGTGCCGCACATTGAAATATCGCACGTGTTTTC CATTTGCCTTTCTTAAGGCCAGCAGCGGATTTTGGCGTTTTAAACTCGTT TCCGCCTTGCCATTGCTGTACTGCACCACACTGCCTCTATCATATCGGGC GAACGCATGTCGAACAGGTGGCGGACGAGGAGCACTGGCCGGAGCTGCGG GCGGTGATCCTGGTGGTGTCCGCCGACAAGAAGCACACATCCTCCACCGT CGGCATGGACATGAGCGTCACCACCAGCCCCCTCCTCGCCTTCCGGGCCA GAGAGGTCGGTTATCGCTGTTTGCAATCCTTCGTATTAAGGATTGTCGTG CCGCTAGGCGTCTCGAGGTAGATCGTGTTTGTTGCGTGGCTTAGTCTGCC TTGACTAGATTCTACGAACCACCGCAGCATTTTGCGCCTTTTTTCATGAG GAGGGGACGCGAGAACGAAACGACAAAGATTGAAAGAAACTCTCATCTCG CCTTCATGGCGGCCATGGCGGCCATGGCGGCACCTCTTGCTGCGGCGGCG CTAGCGGCGGCGGCGGCGATGGTGGCAGCGACGGCAATGGCTGCGGTGGC CACGGCGGCGATAGCGGCGGCAGCGGCAGCGACGGCGGCAGCGGCAGCGG CAGCGACGGCGGCAGCGGCAGCGGCAGCGACGGCGGCAGCGGCAGCGACG GCGGCCGCAATGAATACCACCGAAACCGCTGACCAACTGACGAACGATGC AAAAAGCAGGTGGTGGAGCCGCGGCTGCAGGAGATGGAGGCGGCGTACCT TCGGCGGGACTTCGCGGCCTTTGGGCGGCTGACGATGATGGACTCAAACC AGTTCCACGCCACGTGCCTCGACACATACCCACCCATCTTCTACATGAAC GACATCAGCCGCGCCGTCGTCCGCGCCGTGCACGCCTACAACGACTACCA CGGCGAGGTGCGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9146:13..2325-

>mRNA_P-wetherbeei_contig9146.1.1 ID=mRNA_P-wetherbeei_contig9146.1.1|Name=mRNA_P-wetherbeei_contig9146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig9146:13..2325- (Phaeothamnion wetherbeei SAG_119_79)
ATGTATCTGCAGGATGACCTGAAGGCCATCACGACGGTGGCGGCCAGCAA
GAGCTTCTCCCGGGACCGCTTGTGGCTCAATGGCACGGAGGAGGATGTCG
CGGGGAACCGACGGTTCCAGGCGGTGATCACACAGGTGAAGGCGCTGGCG
TCGAACCGCGTGGACGAGATGACGGGCGAGGTGCTGGTGGAGGCGTCCGA
TTGGGGCTTGTACAAGGTGCACATCGCGTCCCGCAACACGTTCCCGACGG
CTGCGGGGCTGGCGTCGTCGGCGGCGGGGTTGGCGTGCCTCACCTTCGCG
CTGGCGCAGCTCTTCAATGCCCGCGAGAGCTTCCCGGGGGAGCTGACGGC
CATCGCGCGGCAGGGGTCGGGCAGCGCGTGTCGCAGCTTGTACGGCGGCT
TCGTTAAGTGGGTCAAAGGAGTCCGGCCCGACGCCAGAGACAGCATTGCG
GTGCAGGTGGCGGACGAGGAGCACTGGCCGGAGCTGCGGGCGGTGATCCT
GGTGGTGTCCGCCGACAAGAAGCACACATCCTCCACCGTCGGCATGGACA
TGAGCGTCACCACCAGCCCCCTCCTCGCCTTCCGGGCCAGAGAGGTGGTG
GAGCCGCGGCTGCAGGAGATGGAGGCGGCGTACCTTCGGCGGGACTTCGC
GGCCTTTGGGCGGCTGACGATGATGGACTCAAACCAGTTCCACGCCACGT
GCCTCGACACATACCCACCCATCTTCTACATGAACGACATCAGCCGCGCC
GTCGTCCGCGCCGTGCACGCCTACAACGACTACCACGGCGAGGTGCGT
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