mRNA_P-wetherbeei_contig9146.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: D7FTH9_ECTSI (Diphosphomevalonate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH9_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 2.420e-142 Identity = 206/263 (78.33%), Postives = 233/263 (88.59%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798 QDDL+AITTVAASK F +D+LWLNGTEEDV+ N+RFQAVI QV+ALA+ + DE TGEV+V DW Y+V IASRNTFPTAAGLASSAAGLACLTF+LA+LFNA+ESF GEL++IARQGSGSACRSLYGGFVKW KGVR DARDSIAVQVADE HWPE+RA+ILVVSADKK TSST GM SV TSPLL FRA+EVVEPRL E+E AYL +DFA FG++TM DSNQFHATCLDTYPPIFYMND+SR+V+R VHAYN +HGE+R Sbjct: 46 QDDLRAITTVAASKDFEKDQLWLNGTEEDVSKNKRFQAVIRQVRALATEKRDEATGEVVVAEGDWDQYRVRIASRNTFPTAAGLASSAAGLACLTFSLAKLFNAKESFDGELSSIARQGSGSACRSLYGGFVKWQKGVREDARDSIAVQVADEHHWPEMRALILVVSADKKDTSSTSGMSTSVQTSPLLGFRAKEVVEPRLAEIEKAYLEKDFATFGKITMQDSNQFHATCLDTYPPIFYMNDVSRSVIRIVHAYNAFHGEIR 308
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A835YQZ6_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ6_9STRA) HSP 1 Score: 382 bits (982), Expect = 6.970e-129 Identity = 198/263 (75.29%), Postives = 218/263 (82.89%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798 QDDLKAITTVAAS+SFS+DRLWLNG EEDV N+R VI V+ALA ++VD TGEVLV +DW Y VHIASRNTFPTAAGLASSAAG ACLTFALAQLF A E++ GELTAIARQGSGSACRSLYGGFV+W KG R DA DSIAVQVADE HWPELRA+I V SA KK TSST GM SV TS LL RA +VEPRL +EAAYL RDFA FGR TM+DSNQFHATCLDTYPPIFYMND+SRA+V+AVHA+N +HG +R Sbjct: 45 QDDLKAITTVAASRSFSKDRLWLNGKEEDVESNKRLTTVIKLVRALAGDKVDAKTGEVLVYKADWPQYHVHIASRNTFPTAAGLASSAAGYACLTFALAQLFAACETYDGELTAIARQGSGSACRSLYGGFVRWQKGERADAADSIAVQVADEAHWPELRALIFVASAAKKGTSSTSGMGTSVATSELLRHRAAALVEPRLAAIEAAYLARDFAGFGRATMVDSNQFHATCLDTYPPIFYMNDVSRALVQAVHAFNAHHGAIR 307
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7R9UJI1_DIALT (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UJI1_DIALT) HSP 1 Score: 341 bits (875), Expect = 2.240e-114 Identity = 173/266 (65.04%), Postives = 207/266 (77.82%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGN----RRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEV 795 QDDL A+T++AAS F DRLWLNG EED AGN +R + + +++ LA +RVD +G V+ A++ YKVH+ SRNTFPTAAGLASSAAG ACL LA+L+N E++ G+L+ IARQGSGSACRSLYGGFVKWVKG +PDA DS+AV VAD+ HWPELRAVILV++A KK T ST GM SV TSPLLAFRA VVEPRL MEAAY RDF AFG+LTM DSNQFHATCLDTYPPIFY+ND+SR +R HA+N++ G + Sbjct: 48 QDDLCAMTSIAASSDFVADRLWLNGKEEDTAGNGTHAKRLRKCLAEMRGLARDRVDA-SGAVVCTATELASYKVHVVSRNTFPTAAGLASSAAGYACLVHTLAKLYNVEEAYEGQLSTIARQGSGSACRSLYGGFVKWVKGRKPDATDSMAVCVADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLNDVSRQAIRLCHAFNEHKGRI 312
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7R9ULP1_DIALT (Diphosphomevalonate decarboxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9ULP1_DIALT) HSP 1 Score: 341 bits (875), Expect = 8.400e-113 Identity = 173/266 (65.04%), Postives = 207/266 (77.82%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGN----RRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEV 795 QDDL A+T++AAS F DRLWLNG EED AGN +R + + +++ LA +RVD +G V+ A++ YKVH+ SRNTFPTAAGLASSAAG ACL LA+L+N E++ G+L+ IARQGSGSACRSLYGGFVKWVKG +PDA DS+AV VAD+ HWPELRAVILV++A KK T ST GM SV TSPLLAFRA VVEPRL MEAAY RDF AFG+LTM DSNQFHATCLDTYPPIFY+ND+SR +R HA+N++ G + Sbjct: 48 QDDLCAMTSIAASSDFVADRLWLNGKEEDTAGNGTHAKRLRKCLAEMRGLARDRVDA-SGAVVCTATELASYKVHVVSRNTFPTAAGLASSAAGYACLVHTLAKLYNVEEAYEGQLSTIARQGSGSACRSLYGGFVKWVKGRKPDATDSMAVCVADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLNDVSRQAIRLCHAFNEHKGRI 312
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: B8BS75_THAPS (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS75_THAPS) HSP 1 Score: 325 bits (834), Expect = 3.040e-108 Identity = 170/265 (64.15%), Postives = 209/265 (78.87%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVA-GNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKW-VKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798 Q DL+A+TT AAS SF++DRLWLNG+EE A ++RF+A I ++ALA+++VD T EV+V S W VH+AS NTFPTAAGLASSAAG A L +L +L+NA+ES+PGE TAIARQGSGSACRSLYGGFV W G++ D DSIA QVADE HW E+RAVILVVS KK TSSTVGM+ SV TS LLA RA+E+V R++ +E A +DF AFG++TMMDSNQFHATCLDTYPPIFYMND+SR+V++ V YN++ GE+R Sbjct: 39 QSDLRAVTTAAASTSFTKDRLWLNGSEEANAFTSKRFRACIDGLRALATDKVDPTTNEVIVSKSQWQSMHVHVASYNTFPTAAGLASSAAGYAALVASLVELYNAKESYPGEFTAIARQGSGSACRSLYGGFVAWRAGGMKEDWSDSIAEQVADEMHWKEMRAVILVVSDAKKETSSTVGMETSVATSELLAHRAKEIVPKRMKIIEDAIQAKDFEAFGKVTMMDSNQFHATCLDTYPPIFYMNDVSRSVIQMVTRYNEWAGEIR 303
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7S4J2Z5_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J2Z5_9STRA) HSP 1 Score: 328 bits (840), Expect = 4.320e-108 Identity = 172/265 (64.91%), Postives = 207/265 (78.11%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAG-NRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKW-VKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798 Q DL+A+TT +AS SF+ DRLWLNG EE+ A ++RF+A + V+ LA++RVD TGEV+V +W VHIAS NTFPTAAGLASSAAG A L ALA+LFNA+E++PGELTAIARQGSGSACRSLYGGFV W + G D DSIA QVA E HWPE+RAVI+VVS KK TSST GM SV TS LLA RA+EVV R+ +E A+L +DF +FG +TM DSNQFHATCLDT+PPIFYMNDISR++++ VHAYN + GE+R Sbjct: 49 QSDLRAVTTASASMSFNSDRLWLNGAEEEGACLSKRFRACVDGVRRLANDRVDPKTGEVVVTKDEWADMHVHIASYNTFPTAAGLASSAAGYAALVAALAKLFNAKETYPGELTAIARQGSGSACRSLYGGFVAWRMGGQAEDWSDSIAEQVASESHWPEIRAVIMVVSDAKKDTSSTAGMSTSVKTSKLLAHRAKEVVPERMAAIEKAWLEKDFESFGNITMADSNQFHATCLDTFPPIFYMNDISRSIIQIVHAYNFWAGEIR 313
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A3G5BBY8_HASOS (Diphosphomevalonate decarboxylase n=1 Tax=Haslea ostrearia TaxID=67476 RepID=A0A3G5BBY8_HASOS) HSP 1 Score: 325 bits (832), Expect = 5.460e-107 Identity = 168/265 (63.40%), Postives = 204/265 (76.98%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEED-VAGNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGV-RPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798 Q DLKA+TT AAS SF +DRLWLNG EE+ A N+RF+A + V ALA+++VD TGEVLV+ DW VHI+S NTFPTAAGLASSAAG A L A+ L A+E +PG+ + IARQGSGSACRSLYGGFV W KG +PD DS+A QVADE HWPE+RAVI+VVS +KK TSST GM SV TS LL RA VV R++ +E A+L +DF +FG+LTM DSNQFHATCLDTYPPIFYMND+S++++R +HAYN + GE+R Sbjct: 44 QADLKAVTTAAASLSFEKDRLWLNGVEEEGAAENKRFRACVDGVMALATDKVDPKTGEVLVKKEDWKKMHVHISSYNTFPTAAGLASSAAGYAALVAAMMFLVGAKEEYPGQFSTIARQGSGSACRSLYGGFVAWRKGGDKPDWSDSMAQQVADENHWPEIRAVIMVVSDEKKDTSSTSGMSTSVATSELLKHRAANVVSKRMEAIEKAFLAKDFESFGQLTMADSNQFHATCLDTYPPIFYMNDVSKSIIRILHAYNAWAGELR 308
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7S1ZIN1_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIN1_9STRA) HSP 1 Score: 322 bits (826), Expect = 6.220e-106 Identity = 166/265 (62.64%), Postives = 209/265 (78.87%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAG-NRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKW-VKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798 Q DL+A+TT +A +++ DRLWLNG EE+ A ++RF+A + VK LAS+R+D TG+V+V+ DW V I+S NTFPTAAGLASSAAG A L FALA+LF A+E++PGEL+ IARQGSGSACRSLYGGFV W + G++ D DS+A QVA E HWPE+RA+ILVVS KK TSST GM SV TS LLA RA+EVV R++E+E A+L +DF++F ++TM DSNQFHATCLDTYPPIFYMND+S++V+R VHAYN + GE R Sbjct: 51 QTDLRAVTTASACTAYTTDRLWLNGAEEENASTSKRFRACVDGVKRLASDRIDPTTGDVVVKKEDWDTMHVRISSYNTFPTAAGLASSAAGYAALVFALAKLFCAKETYPGELSVIARQGSGSACRSLYGGFVAWRMGGLKEDWTDSLAEQVAPETHWPEIRALILVVSDAKKDTSSTSGMSTSVATSLLLAHRAKEVVPKRMEEIEKAWLAKDFSSFAKITMADSNQFHATCLDTYPPIFYMNDVSKSVIRIVHAYNAWAGEER 315
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A6G0XPY7_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPY7_9STRA) HSP 1 Score: 316 bits (810), Expect = 7.250e-104 Identity = 157/263 (59.70%), Postives = 200/263 (76.05%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTEEDVAGNRRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRPDARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798 QD LK +T++ ASK F+ DR+WLNG E+++ N+R Q V+ +++ LAS++ + G + +A DW YK+HI S NTFPTAAGLASSAAG ACL ALA+LF A E + G+ +AIARQGSGSACRSL+GGFV+W KG + D DS+A+Q+AD EHWPEL A+I VV+ +K TSST GM S TS LL FRAREVV+ RL +EAAY DF FG++TMMDSNQFHATCLDTYPPIFYMN+ISR+++ VH YND G+++ Sbjct: 39 QDQLKTVTSIVASKDFTDDRIWLNGAEQNIQ-NKRIQVVLKEMRRLASDKAVDQDGNTIAKA-DWNNYKLHIVSINTFPTAAGLASSAAGYACLVAALAELFAAEEEYEGQFSAIARQGSGSACRSLHGGFVRWDKGSKVDGSDSLAIQIADHEHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSELLGFRAREVVDKRLAAIEAAYKAMDFETFGKITMMDSNQFHATCLDTYPPIFYMNEISRSIIHLVHKYNDNAGKIQ 299
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Match: A0A7S2RMS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMS8_9STRA) HSP 1 Score: 320 bits (820), Expect = 9.650e-104 Identity = 166/270 (61.48%), Postives = 206/270 (76.30%), Query Frame = 1 Query: 10 QDDLKAITTVAASKSFSRDRLWLNGTE---EDVAGN---RRFQAVITQVKALASNRVDEMTGEVLVEASDWGLYKVHIASRNTFPTAAGLASSAAGLACLTFALAQLFNARESFPGELTAIARQGSGSACRSLYGGFVKWVKGVRP-DARDSIAVQVADEEHWPELRAVILVVSADKKHTSSTVGMDMSVTTSPLLAFRAREVVEPRLQEMEAAYLRRDFAAFGRLTMMDSNQFHATCLDTYPPIFYMNDISRAVVRAVHAYNDYHGEVR 798 QDDL+AITTV ASK FS DRLWLNG E DV+ N +RFQ + +++ LA +R+D TG+VLV DW Y++H+ SRNTFPTAAGLASSAAG ACL FAL++LF + S +++ IARQGSGSACRSL+GGFVKW +G + +DS AV VA +E W ++ VILV + KK TSST GM+ SV TSPLLAFRAREVV+ RL +E AY R+F+ FG+LTM DSNQFHATCLDTYPPIFY+ND+SR ++R VHA+NDY+GE+R Sbjct: 45 QDDLRAITTVVASKDFSSDRLWLNGEELDINDVSKNSHAKRFQTCLLEMRKLAEDRIDPNTGDVLVRKEDWSQYRIHVVSRNTFPTAAGLASSAAGYACLVFALSKLFQVKASLS-DISVIARQGSGSACRSLFGGFVKWEQGTAAANWQDSRAVPVASKEDWEDMATVILVANDKKKDTSSTSGMNTSVETSPLLAFRAREVVDGRLAAIEKAYRARNFSEFGQLTMADSNQFHATCLDTYPPIFYLNDVSRQIIRLVHAFNDYYGEIR 313 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9146.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9146.1.1 >prot_P-wetherbeei_contig9146.1.1 ID=prot_P-wetherbeei_contig9146.1.1|Name=mRNA_P-wetherbeei_contig9146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp MYLQDDLKAITTVAASKSFSRDRLWLNGTEEDVAGNRRFQAVITQVKALAback to top mRNA from alignment at P-wetherbeei_contig9146:13..2325- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9146.1.1 ID=mRNA_P-wetherbeei_contig9146.1.1|Name=mRNA_P-wetherbeei_contig9146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2313bp|location=Sequence derived from alignment at P-wetherbeei_contig9146:13..2325- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9146:13..2325- >mRNA_P-wetherbeei_contig9146.1.1 ID=mRNA_P-wetherbeei_contig9146.1.1|Name=mRNA_P-wetherbeei_contig9146.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig9146:13..2325- (Phaeothamnion wetherbeei SAG_119_79)back to top |