mRNA_P-wetherbeei_contig9132.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9132.1.1
Unique NamemRNA_P-wetherbeei_contig9132.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: A0A3S3EPD6_9HYPH (Glycosyltransferase n=10 Tax=Mesorhizobium TaxID=68287 RepID=A0A3S3EPD6_9HYPH)

HSP 1 Score: 185 bits (469), Expect = 1.560e-56
Identity = 84/120 (70.00%), Postives = 101/120 (84.17%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFRFT 360
            +ADVVYGSRFYGRPHR+LYF+HYL NR IS +FN+LY+QTLTD+E CYKMF REV +   L+ +DFG E++LSA  AR RR RIYE  ISYYGRTYDEGKKIGWRDG+ ALWY+++FR +
Sbjct:  136 VADVVYGSRFYGRPHRSLYFHHYLANRFISLMFNLLYNQTLTDIECCYKMFTREVKDRLRLTCDDFGCEIQLSAQIARARRLRIYEVGISYYGRTYDEGKKIGWRDGMKALWYLIRFRIS 255
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: UPI000BA2EE71 (glycosyltransferase family 2 protein n=1 Tax=Mesorhizobium carmichaelinearum TaxID=1208188 RepID=UPI000BA2EE71)

HSP 1 Score: 184 bits (468), Expect = 2.210e-56
Identity = 83/119 (69.75%), Postives = 99/119 (83.19%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFRF 357
            +ADVVYGSRFYGRPHR+LYF+HY+ NR IS +FN+LY+QTLTD+E CYKM  REV+    LS NDFG E++LSA  A   RWRIYE  ISY+GRTY+EGKKIGWRDGV A+WY+V+FRF
Sbjct:  136 VADVVYGSRFYGRPHRSLYFHHYVANRFISLVFNLLYNQTLTDIECCYKMLTREVMRHLRLSCNDFGCEIQLSAQIALANRWRIYEVGISYFGRTYEEGKKIGWRDGVKAIWYLVRFRF 254
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: A0A317PL01_9HYPH (Glycosyl transferase family 2 n=1 Tax=Hoeflea marina TaxID=274592 RepID=A0A317PL01_9HYPH)

HSP 1 Score: 183 bits (464), Expect = 8.920e-56
Identity = 80/118 (67.80%), Postives = 101/118 (85.59%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFR 354
            +ADVVYGSRFYGRPHR+LYF+HYL NR IS +FN+LY+QTLTD+E CYKMF R+V++   L+ NDFG E+++SA  AR  RWRIYE  ISY+GRTY+EGKKIGW+DGV A+WY+++FR
Sbjct:  136 VADVVYGSRFYGRPHRSLYFHHYLANRFISLMFNLLYNQTLTDIECCYKMFTRDVLDQLHLTCNDFGCEIQISAQIARAGRWRIYETGISYFGRTYEEGKKIGWQDGVKAIWYLLRFR 253
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: A0A525KJ42_BRASZ (Glycosyltransferase family 2 protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525KJ42_BRASZ)

HSP 1 Score: 181 bits (460), Expect = 4.410e-55
Identity = 79/120 (65.83%), Postives = 101/120 (84.17%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFRFT 360
            +ADVVYGSRFYG+PHR+LYF+HYL NR IS +FNVL +QTLTD+ETCYKMF REV++   +++NDFGIEV++SA  A  R+WRIYE  I YYGRTY EGKKI W+DG+ ALWY++++R +
Sbjct:  141 VADVVYGSRFYGKPHRSLYFHHYLANRLISMIFNVLCNQTLTDIETCYKMFTREVLQTLNITANDFGIEVQISAQIALARKWRIYETGIHYYGRTYREGKKINWKDGLKALWYLIRYRIS 260
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: A0A435UDV8_9HYPH (Glycosyltransferase family 2 protein n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A435UDV8_9HYPH)

HSP 1 Score: 179 bits (455), Expect = 2.050e-54
Identity = 80/118 (67.80%), Postives = 97/118 (82.20%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFR 354
            +ADVVYGSRFYGRPHR+LYF+HYL NR IS  FN+L++QTLTD+E CYKMF R+V+    L+ NDFG E++LSA  A   RWRIYE  ISY+GRTY+EGKKIGWRDGV A+WY+ +FR
Sbjct:  136 VADVVYGSRFYGRPHRSLYFHHYLANRLISLAFNLLFNQTLTDIECCYKMFTRDVLSRLRLTCNDFGCEIQLSAQIALAGRWRIYEMGISYFGRTYEEGKKIGWRDGVKAIWYLARFR 253
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: UPI001CD0DB16 (glycosyltransferase family 2 protein n=1 Tax=Mesorhizobium sp. BR1-1-3 TaxID=2876651 RepID=UPI001CD0DB16)

HSP 1 Score: 179 bits (455), Expect = 2.050e-54
Identity = 80/118 (67.80%), Postives = 97/118 (82.20%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFR 354
            +ADVVYGSRFYGRPHR+LYF+HYL NR IS  FN+L++QTLTD+E CYKMF R+V+    L+ NDFG E++LSA  A   RWRIYE  ISY+GRTY+EGKKIGWRDGV A+WY+ +FR
Sbjct:  136 VADVVYGSRFYGRPHRSLYFHHYLANRLISLAFNLLFNQTLTDIECCYKMFTRDVLSRLRLTCNDFGCEIQLSAQIALAGRWRIYEMGISYFGRTYEEGKKIGWRDGVKAIWYLARFR 253
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: UPI000346E13F (glycosyltransferase family 2 protein n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI000346E13F)

HSP 1 Score: 176 bits (445), Expect = 8.920e-53
Identity = 78/119 (65.55%), Postives = 95/119 (79.83%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFRF 357
            +ADVVYGSRFYG  HR+LYF+HY  N+ IS LFN+LY+QTL+D+E CYKMF REV+E   ++ NDFG E+++SA  AR R+WRIYE  I YYGRTY EGKKI W+DGV ALWY+  FRF
Sbjct:  147 VADVVYGSRFYGYAHRSLYFHHYCANQLISLLFNLLYNQTLSDVEVCYKMFTREVLESLKITQNDFGFEIQISAQIARQRKWRIYELGIHYYGRTYSEGKKINWKDGVKALWYLFWFRF 265
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: A0A503PRV9_9HYPH (Glycosyltransferase family 2 protein n=2 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A503PRV9_9HYPH)

HSP 1 Score: 175 bits (443), Expect = 1.890e-52
Identity = 79/120 (65.83%), Postives = 97/120 (80.83%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFRFT 360
            +ADVVYGSRFYGRPHR+LYF+HY+ NR IS  FN+LY+QTLTD+E CYKMF   V E  TL+ +DFG E+++SA  AR    RIYE  ISYYGRTY+EGKKIGWRDG+ ALWY+++FR +
Sbjct:  148 VADVVYGSRFYGRPHRSLYFHHYVANRFISLTFNLLYNQTLTDIECCYKMFTHAVKERLTLTCDDFGCEIQMSAQIARAGDLRIYEVGISYYGRTYEEGKKIGWRDGIKALWYLIRFRLS 267
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: UPI001BD54F28 (glycosyltransferase family 2 protein n=1 Tax=Bradyrhizobium sp. dw_78 TaxID=2719793 RepID=UPI001BD54F28)

HSP 1 Score: 174 bits (440), Expect = 3.600e-52
Identity = 75/118 (63.56%), Postives = 98/118 (83.05%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFR 354
            +ADVVYGSRF+G+ HR+LYF+HYL NR IS +FNVL +QTLTD+ETCYKMF REV++   +++NDFG+EV++S   A  R+WR+YE AI YYGRTY EGKKI W+DG+ ALWY+ ++R
Sbjct:  132 VADVVYGSRFHGKSHRSLYFHHYLANRLISVIFNVLCNQTLTDIETCYKMFTREVLDSLNITANDFGMEVQISCQIALARKWRVYETAIHYYGRTYQEGKKINWKDGLKALWYLGRYR 249
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BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Match: A0A330HBL3_9HYPH (Glycosyltransferase family 2 protein n=2 Tax=Mesorhizobium TaxID=68287 RepID=A0A330HBL3_9HYPH)

HSP 1 Score: 174 bits (440), Expect = 3.820e-52
Identity = 79/120 (65.83%), Postives = 97/120 (80.83%), Query Frame = 1 
Query:    1 IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKMFRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGKKIGWRDGVLALWYVVKFRFT 360
            +ADVVYGSRF+GRPHR+LYF+HY+ NR IS  FN+LY+QTLTD+E CYKMF R V E   L+ +DFG E+++SA  AR    RIYE  ISYYGRTYDEGKKIGWRDG+ ALWY+++FR +
Sbjct:  136 VADVVYGSRFHGRPHRSLYFHHYVANRFISLTFNLLYNQTLTDIECCYKMFTRAVKERLRLTCDDFGCEIQMSAQIARAGGLRIYEVGISYYGRTYDEGKKIGWRDGIKALWYLIRFRVS 255
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9132.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S3EPD6_9HYPH1.560e-5670.00Glycosyltransferase n=10 Tax=Mesorhizobium TaxID=6... [more]
UPI000BA2EE712.210e-5669.75glycosyltransferase family 2 protein n=1 Tax=Mesor... [more]
A0A317PL01_9HYPH8.920e-5667.80Glycosyl transferase family 2 n=1 Tax=Hoeflea mari... [more]
A0A525KJ42_BRASZ4.410e-5565.83Glycosyltransferase family 2 protein n=1 Tax=Brady... [more]
A0A435UDV8_9HYPH2.050e-5467.80Glycosyltransferase family 2 protein n=3 Tax=Mesor... [more]
UPI001CD0DB162.050e-5467.80glycosyltransferase family 2 protein n=1 Tax=Mesor... [more]
UPI000346E13F8.920e-5365.55glycosyltransferase family 2 protein n=1 Tax=Synec... [more]
A0A503PRV9_9HYPH1.890e-5265.83Glycosyltransferase family 2 protein n=2 Tax=uncla... [more]
UPI001BD54F283.600e-5263.56glycosyltransferase family 2 protein n=1 Tax=Brady... [more]
A0A330HBL3_9HYPH3.820e-5265.83Glycosyltransferase family 2 protein n=2 Tax=Mesor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9132contigP-wetherbeei_contig9132:3..377 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog195250.CM001776_gene1398
PFAMsGlycos_transf_2
Model size375
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-53
EggNOG OGsCOG0463@1|root,COG0463@2|Bacteria,1G4BG@1117|Cyanobacteria,1H4EA@1129|Synechococcus
DescriptionGlycosyltransferase like family 2
Cds size375
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187077.5511994-CDS-P-wetherbeei_contig9132:2..3771683187077.5511994-CDS-P-wetherbeei_contig9132:2..377Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9132 3..377 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9132.1.1prot_P-wetherbeei_contig9132.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9132 3..377 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9132.1.1

>prot_P-wetherbeei_contig9132.1.1 ID=prot_P-wetherbeei_contig9132.1.1|Name=mRNA_P-wetherbeei_contig9132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
IADVVYGSRFYGRPHRALYFYHYLGNRTISALFNVLYDQTLTDLETCYKM
FRREVIEGATLSSNDFGIEVELSAVFARPRRWRIYECAISYYGRTYDEGK
KIGWRDGVLALWYVVKFRFTRLSR*
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mRNA from alignment at P-wetherbeei_contig9132:3..377+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9132.1.1 ID=mRNA_P-wetherbeei_contig9132.1.1|Name=mRNA_P-wetherbeei_contig9132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig9132:3..377+ (Phaeothamnion wetherbeei SAG_119_79)
ATTGCCGACGTGGTGTACGGCTCGCGCTTCTACGGCCGCCCGCATCGCGC
CCTGTATTTCTACCACTACCTCGGCAATCGGACGATTTCCGCGCTGTTCA
ACGTCCTCTATGATCAGACGCTGACCGATCTCGAGACCTGCTACAAAATG
TTCCGTCGCGAGGTGATCGAGGGCGCCACCCTCTCGAGCAACGATTTTGG
GATCGAGGTCGAGCTTTCCGCCGTGTTCGCGCGGCCCAGGCGCTGGCGGA
TCTACGAATGCGCCATCAGCTACTACGGACGTACCTATGACGAAGGCAAG
AAGATCGGCTGGCGCGATGGAGTGCTGGCGCTTTGGTATGTTGTGAAGTT
CCGCTTCACGCGGCTTTCGCGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9132:3..377+

>mRNA_P-wetherbeei_contig9132.1.1 ID=mRNA_P-wetherbeei_contig9132.1.1|Name=mRNA_P-wetherbeei_contig9132.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig9132:3..377+ (Phaeothamnion wetherbeei SAG_119_79)
ATTGCCGACGTGGTGTACGGCTCGCGCTTCTACGGCCGCCCGCATCGCGC
CCTGTATTTCTACCACTACCTCGGCAATCGGACGATTTCCGCGCTGTTCA
ACGTCCTCTATGATCAGACGCTGACCGATCTCGAGACCTGCTACAAAATG
TTCCGTCGCGAGGTGATCGAGGGCGCCACCCTCTCGAGCAACGATTTTGG
GATCGAGGTCGAGCTTTCCGCCGTGTTCGCGCGGCCCAGGCGCTGGCGGA
TCTACGAATGCGCCATCAGCTACTACGGACGTACCTATGACGAAGGCAAG
AAGATCGGCTGGCGCGATGGAGTGCTGGCGCTTTGGTATGTTGTGAAGTT
CCGCTTCACGCGGCTTTCGCGCTAG
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