mRNA_P-wetherbeei_contig911.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig911.1.4
Unique NamemRNA_P-wetherbeei_contig911.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 2.270e-146
Identity = 239/391 (61.13%), Postives = 300/391 (76.73%), Query Frame = 2
Query: 2942 IQQVFAAVGMPPADTMLPVNEPLSKKPRSEDAGTTSASESGTDEEERRRIDRERNRQHARNTRARKKAFVDELQAQLTKVTEEKEAILNAEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAWKAVASEDIKLILPITPYRSFNPTDVISHRRVMLGLEGVVSDTSSLMVMCDLIGSKRRSKEGRVHIEYLLGTDA-DNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKDEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHIVGILDEV 4111
            +Q +F+A     A      +EP +K+ ++ +A    A  S   +EER++ +RERNR HARNTRARKKA+ DEL A+L  +T+EKE    AEA A    T QQ+AW  TLR+AMDLR+AG +D   W  + +ED K+ +P+TPYRSF+P+DV+++RRV+LG++G+V+DT+SL VM D IG+K R  EGRV +EYLLG+DA +NCFFG+ GLMCTFMMRT DAK HGA C  E++G+LR RF +  G IEELEM FD IA YHQLMRA G  +FPLVPNTL   LK++K HIVVTTAQRPFRITHVN AWT+LCGFELDECKGKNLSILQGPETDM TV+ L  ++Q+G+ ASM+VTNY+K G  FRNHL+CYP++SD SGEISHIVG LDE+
Sbjct:   15 LQDIFSAADSTGA------SEPDAKRLKTNEASR--APTSSAQDEERKKQERERNRMHARNTRARKKAYADELTAKLAALTKEKEEHEKAEAEASKARTVQQSAWAATLRQAMDLRAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRRVLLGVDGMVADTASLQVMLDNIGTKTRKNEGRVRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDAKAHGAACECEKSGILRARFDDA-GCIEELEMAFDGIAMYHQLMRAKGQGDFPLVPNTLNAVLKNDKDHIVVTTAQRPFRITHVNGAWTQLCGFELDECKGKNLSILQGPETDMDTVTELVDISQRGYPASMVVTNYDKSGRPFRNHLRCYPISSDDSGEISHIVGYLDEI 396          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 2.640e-112
Identity = 199/356 (55.90%), Postives = 256/356 (71.91%), Query Frame = 2
Query: 3074 EERRRIDRERNRQHARNTRARKKAFVDELQAQLTKVTEEKEAILNAEAAAKNRATQQQ-----AAWITTLRKAMDLRSAGTVDPEAWKAVASEDIKLILPITPYRSFNPTDVISHRRVMLGLEGVVSDTSSLMVMCDLIGSKRRSKEGRVHIEYLLGTDADN--CFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKDEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHIVGILDEVTDQ 4120
            +E++ +DRERNR+ AR +R  KK   D++Q QL ++ +E     +AEAAA+ +   ++      A    LRK  DLR+ G  D  +W  V S D+++ +PITPYRSFNP DV+++RRV+LG++G++SDT SL V+ D IG K R  E  V I++ L +DAD    FF  +GLMC+F MRT DA +H A    E  GM+RVRF+    KIEEL+MTFDAI+ Y QLM A+G E+FP VPNTL  ALKDE   IVVTTA RPFRITHVN+AWTELCGFEL+EC+GK+LSILQGPETDM  V  LC L+Q+G+A SM+VTN+NKKGE FRNHL+CYPV+SD  GEISHIVG+L  +  +
Sbjct:   88 DEKKLMDRERNRRQARKSRELKKQCADKMQQQLIQLEKE-----SAEAAAREKEAAKKLKDCRTARCQALRKVFDLRADGCTDEASWLEVLSPDLRMTMPITPYRSFNPADVVNNRRVLLGVDGMISDTQSLSVLLDNIGVKTRLYESPVSIKFTLASDADEGGAFFSRDGLMCSFTMRTLDAVKHAARREWEVNGMVRVRFNSDTNKIEELDMTFDAISCYQQLMLASGKEDFPPVPNTLDNALKDETSPIVVTTAARPFRITHVNKAWTELCGFELEECEGKSLSILQGPETDMTRVDKLCKLSQKGYATSMVVTNHNKKGELFRNHLQCYPVSSDEPGEISHIVGMLTAIPSE 438          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A7S2FIQ7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FIQ7_9STRA)

HSP 1 Score: 256 bits (653), Expect = 8.730e-71
Identity = 145/342 (42.40%), Postives = 208/342 (60.82%), Query Frame = 2
Query: 3104 NRQHARNTRARKKAFVDELQAQLTKVTEEKEAILNAEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAWKAVASEDIKLILPITPYRSFNPTDVISHRRVMLGLEGVVSDTSSLMV-MCDLIGSKRRSKEGRVHIEYLLGTDADNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRAN------GVEEFPLVPNTLQTALKDEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMS--GEISHIVGIL 4102
            NR+HAR TR RKK ++  LQ QL  +TEE+  +        N    Q + W+ T+R A+ LR+AG  D + W+    E+I L+ PITPYRSF   DV+S+R V++G+  ++ D SSL+V +  L  +     E ++ ++     D +   F  EGLMC F M+T + +  G    V + G LR +F+E +G+++ LE+ FD I+F+ Q+ +AN       +++  L PNTL+ AL   K   VVT A RPFRITHVN AWT+LCGF  +E  G+ L  LQG +TD  TV+ L      G A SM VTNY+K+G+KFRN L+ YP+ S+ S  GEISH++G+L
Sbjct:  124 NRRHARETRLRKKNYMHSLQQQLEAMTEERNLLEKEIQEKMNAECGQHSRWVKTVRCALALRAAGCPDVDQWRKFVDEEIVLVHPITPYRSFRTGDVVSNRCVLMGIPDIIQDASSLLVSLAALCKTGVHDAERKIKVQVRFAIDDEALHFSEEGLMCPFEMKTVNLEALGLRTEVSKNGCLRAQFNE-EGRLKHLELCFDPISFWRQMQQANTGSQISSIDDLLLAPNTLEQALSHSKEARVVTEAARPFRITHVNSAWTDLCGFTQEEACGQTLRCLQGEDTDGNTVAQLVEDCNDGKATSMEVTNYDKEGKKFRNFLQVYPLTSEKSSSGEISHMLGVL 464          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A7S2DLD9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLD9_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.610e-69
Identity = 153/395 (38.73%), Postives = 233/395 (58.99%), Query Frame = 2
Query: 2975 PADTMLPVNEPLSKKPRSEDAGTTSASESGT---------DEEERRRIDRERNRQHARNTRARKKAFVDELQAQLTKVTEEKEAILNAEAAAKNRATQQQAA---WITTLRKAMDLRSAGTVDPEAWKAVASEDIKLILPITPYRSFNPTDVISHRRVMLGLEGVVSDTSSLMV-MCDLIGSKRRSKEGRVHIEYLLGTDADNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKDEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMS-GEISHIVGILDEVTD 4117
            P+ +   + EP  K+P     G  S+S+S +         D+EE RR   ERNR+HAR TR RKK +++ L++QL +++ +  A+   E   K++   Q A    WIT L+ A+ LR++   D   W+    ++I L+ PITPYRS+   DVIS+R V++G++ ++ D +SL++ +  L             ++     D     +  EG+MC F MR+++    G    V + G LR  F+ ++GK+++LE+ FD IAF+ QL  A+G +E  L PNT++ AL+      V+T A RPFRITHVN AWTELCGF  +E  GK LS++QGP+TD  TV+ LC     G A+SM   NY K+GE+F N+L+ +P+AS  S G++SH++G+L    D
Sbjct:   81 PSTSAATIVEPPHKRPCHTVTGGVSSSDSESVASSTDFRGDKEECRR---ERNRRHARETRLRKKEYMETLKSQLEQLSAQNAAL---EKQIKDKRLGQDAKHDLWITKLQGALALRASAEPDQSRWRNFVDDEIVLVHPITPYRSYRSADVISNRCVLMGIQDIIDDAASLLIALAGLCNEGIHDGTRNQKVQLRFNIDEQGMHYREEGIMCPFDMRSSNLTPLGLKSEVNKRGCLRAIFN-SEGKVKQLELHFDPIAFWRQLQHASGAKEVLLAPNTVEGALRHSHDARVITEATRPFRITHVNAAWTELCGFTAEEAYGKTLSLIQGPKTDPDTVAKLCKDCDHGRASSMKTVNYTKQGEEFNNYLQIFPLASSSSSGDVSHLLGVLKPTPD 468          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA)

HSP 1 Score: 223 bits (568), Expect = 9.030e-59
Identity = 127/337 (37.69%), Postives = 198/337 (58.75%), Query Frame = 2
Query: 3095 RERNRQHARNTRARKKAFVDELQAQLTKVTEEKEAILNAEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAWKAVASEDIKLILPITPYRSFNPTDVISHRRVMLGLEGVVSDTSSLMVMCDLIGSKRRSKEGRVHIEYLLGTDADNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKD-EKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHIVGIL 4102
            R+RNR+HARNTR RKKA+++EL+  + ++T E++A   A+AA   RA Q Q+   + L+ A+  R+AG      W     E    +LPITPYRSF   +V+S +R+++G++ +++D +SL +M + +G  R S E RV ++Y  G +  +     + L C +M+RT +A   GALC     GMLR R+S +  K+  LE+ FD + F  QL RA+G+E+F +VPNTL  A    +     +TTA+ P+ I H + AW  LCG+  +E  G+  ++LQGP TD   V+      +     SM V NY K G  F N++  YP+++D  G ++H +  +
Sbjct:  118 RDRNRKHARNTRLRKKAYIEELERTVQQLTAERDAAAAAKAAEGARAAQLQSVRFSVLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQRMIVGIDAMIADVASLALMVESVGRCRPS-ERRVQVQYYAGPE--DAITSGDMLSCRWMLRTENAAACGALCECHAQGMLRARYSPSH-KLAHLELAFDVMGFMQQLQRASGLEDFRVVPNTLAMAQAPCDADARFITTAEPPYLIVHASPAWCRLCGYASEEAVGRTAALLQGPATDRAAVARFMGAVRARHCCSMEVVNYTKAGVPFANYIVAYPLSTD--GRVTHYLATI 448          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A7S2B104_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B104_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.950e-49
Identity = 113/338 (33.43%), Postives = 189/338 (55.92%), Query Frame = 2
Query: 3095 RERNRQHARNTRARKKAFVDELQAQLTKVTEEKEAILNAEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAWKAVASEDIKLILPITPYRSFNPTDVISHRRVMLGLEGVVSDTSSLMVMCDLIGSKRRSKEGRVHIEYLLGTDADNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKDEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHIVGILDE 4108
            R+RNR+HARNTR RKKA++++L+  +  +++E E I       +   T+        +++ M+ R++G V+PE W+AV ++D  + LPITP+R FNP +V+  RRV+ G+ G++ DT+S  V+   IG ++    G V + + +  D +     ++  M  + M TT+A   GAL      GML+  F++ +  I  +++ FD ++F  QL  A G   F +VPN++    +  K   V+ +A  PF I   NQ W ++CGF   E +GK   I+QG ETD   V+ L    Q     SM+  NY K G+ F N ++ +P+ +    E++H + +++E
Sbjct:  251 RDRNREHARNTRLRKKAYIEKLKQTVQVLSKECETITRDNQQDEVNETEILEQRHQVIQRMMNYRTSGVVNPEKWQAVLAQDFTMTLPITPHRFFNPNEVVGCRRVVRGVSGMIQDTASFKVLISSIGRRKYRGHGEVEVNFNM-PDGETVI-KNDLFMTRWTMSTTNAMSKGALAECSLEGMLKATFAD-ENTISSVDLIFDVMSFMQQLPEACG-GPFEVVPNSMFMLSQPSKEARVICSANAPFNIEQANQPWLDICGFTEAEARGKTFKIIQGDETDFVKVADLMRSVQAKLPHSMLTVNYKKSGQPFLNFVRVFPICT--GSEVTHFLSVIEE 582          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A7S1D1F4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1F4_CYCTE)

HSP 1 Score: 185 bits (469), Expect = 1.570e-46
Identity = 126/374 (33.69%), Postives = 207/374 (55.35%), Query Frame = 2
Query: 3074 EERRRIDRERNRQHARNTRARKKAFVDELQAQLTKVTEEKEAILNAEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAWKAVASED-IKLILPITPYRSFNPTDVISHR--RVMLGLEGVVSDTSSLMVMCDLIGSKRRSKEGRVHIEYLLGTDADNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKDEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGK-NLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHIVGILDEVT--DQ*RPVSGR*LAGNRPVTHQP 4177
            EE+ + +R+RNR+HARNTR RKKA++++L++ + ++  E++ +++  A A +   +        L     LRS      + W ++  E     ++P+TPYRSF  ++V   +  R +LG++G++SDT+SL V+ + +  + R     +   Y L T+ D    G++ +M  ++M T +A + GA   V + GML  +F+    KI  LE+ FD +AF  QL +A G E F +VPNT+QT  +     +V+T A+RP+ I  VN+ W ++ GF  ++  GK +  ILQG ETD   V  L +  +    AS  + NY + G++FRN+L  YP+++D   +I+H V +   V   D    V    LAG    T  P
Sbjct:   12 EEKVKANRDRNREHARNTRLRKKAYLEKLKSTVDELCRERDTLVSERAGAASLMVEIHNTRTEVLMSFFALRSTYEKQRDLWSSILDESCFSCVMPVTPYRSFPASEVQVSKCQRTILGIDGMISDTASLHVLLNSLIDRSRYPAASIQFRYTLVTE-DAVVAGNQ-MMARWVMSTVNATQFGARMEVAKQGMLCCKFNSAH-KIIGLELMFDVMAFMLQLKQAAGSETFSVVPNTVQTCQRSFSSPMVMTLAERPYTIVQVNKLWEDMTGFRAEDVVGKASCRILQGQETDRSAVEVLMSSVRFKRPASASLLNYTRAGKRFRNYLNVYPLSTD--SKITHYVSLTAHVDMIDNNGAVGSGTLAGATQSTSMP 380          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A7S2A2E8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A2E8_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.610e-44
Identity = 125/367 (34.06%), Postives = 212/367 (57.77%), Query Frame = 2
Query: 3032 DAGTTSASESGTDE---EERRRIDRERNRQHARNTRARKKAFVDELQAQLTKVTEEKEAILNAEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAWKAVASED-IKLILPITPYRSFNPTDVISHR--RVMLGLEGVVSDTSSLMVMCDLIGSKRRSKEGRVHIEYLLGTDADNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKDEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGK-NLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHIVGILDEV 4111
            +  +TSA+ S TD+   EE+ + +R+RNR+HARNTR RKKA++++L+  + ++  E++ +++    A +   +  +  I  L     LRSA     E W ++  E     ++P+TPYRSF  ++V   +  R +LG++G++SDT+SL V+ + +  + +     V   Y L T+ D+   G++ +M  ++M T +A E GA   V + GML  +F+    KI  LE+ FD +AF  QL ++ G + F +VPNT+QT  +     +V+T A+RP+ I  VN+ W E+ G+  ++  GK +   LQG ET+   V  L +  +    AS ++ NY + G +FRN+L  YP+++D   +I+H VG+   V
Sbjct:  203 EVNSTSAA-SNTDDMTPEEKLKANRDRNREHARNTRLRKKAYLEKLKVTVDELCRERDTLVSERVGAASLLIEMHSTRIDVLMSFFALRSACERRRELWASILDESCFACVMPVTPYRSFPSSEVQVSKCQRTILGIDGMMSDTASLHVLLNSLVDRSKYPNATVQFRYTLVTE-DSVVAGNQ-MMARWVMSTLNATECGARMEVSKQGMLCCKFNSAH-KIIGLELMFDVMAFMLQLKQSTGSDSFSVVPNTVQTCQRPFDTPMVMTLAERPYTIVQVNKLWEEVTGYRAEDVVGKASCRELQGQETNRMDVENLMSSVRYKRPASAVLVNYTRSGRRFRNYLNVYPLSTD--SKITHYVGLTVHV 563          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A7S3JN17_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JN17_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.770e-42
Identity = 142/429 (33.10%), Postives = 209/429 (48.72%), Query Frame = 2
Query: 3077 ERRRIDRERNRQHARNTRARKKAFVDELQAQLTKVTEEKEAIL-NAEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAW-KAVASEDIKLILPITPYRSFNPTDV--------ISHRRVMLGLEGVVSDTSSLMVMCDLIGSKRRSKEGRV--HIEYL--LGTDADNCFFGSEGLMC----------TFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKD-------------------------------------------EKHHI---------------VVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGPETDMGTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHIVGILDEVTD 4117
            ER  + R+RNR++ARNTR RKKA+V +L+  + K+ +E++ ++ + E   K R +++Q      L   +D R+ G V  +AW   V  +  +L LP+TPYRS+NPT+V        ++ RRV  G+ G+V DT+S  VM   IG  RR     V   +E +  LG  +D+    ++ LM            + MRT +A + GA    +Q G L   F + + +++ L++ FDA+ F  QL RA GV    +VPNTLQ ALKD                                              HI               VVT A RP  ITHVN+ + +L G E +E  G++L I+QGP TD   V  + A   +    SMIV NY K  E+F N+L+ +P+    SG ++H  G L+ V D
Sbjct:  161 ERESMCRDRNREYARNTRIRKKAYVRQLEETVKKMRDERDLLIQDEEKYEKIRISRRQC-----LETFLDYRARGEVSEDAWANLVDPQKFELWLPVTPYRSYNPTEVLPSEAGAFVADRRVCRGVHGLVFDTASFAVMLQSIGVPRRRGHKLVACSLELVDPLGLPSDSFTKKNDDLMIDKRDPARVMGAWRMRTRNAVDCGAASECDQRGFLIAAFDKQN-RLKRLDLCFDALGFLRQLQRARGVPWLEVVPNTLQAALKDLAADDASYTAAYAQRLESISSSCGRGSKNNHASLSNKNQSLGPNGRHIAISSLTRYGHFARPKVVTIADRPHLITHVNRDFLDLAGLEANEAIGRSLRIIQGPATDTAVVEDMLADVARRIPTSMIVINYTKSMERFINYLRVFPLFDPSSGIVTHYFGELERVDD 583          
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Match: A0A6H5KUH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH5_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 5.470e-42
Identity = 119/353 (33.71%), Postives = 190/353 (53.82%), Query Frame = 2
Query: 3086 RIDRERNRQHARNTRARKKAFVDELQAQL-----TKVTEEKEAILN-AEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAWKAVASEDIKLILPITPYRSFNPTDVISHRRVMLGLEGVVSDTSSLMVMCDLIGSKRRSKEGRVHIEYLLGTDADNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTGMLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALKDEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGP-ETDMG----TVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHIVGILDEV 4111
            R +R RNR+HARNTR RKK +V+ L+ Q+      K  EE++A L  ++ +AK  A +Q    I  L+   +L       P +W  V  +    + PITP+RSF P++     R++ G+EG++ DT+SL V    I  + R+  GR  ++Y   T  ++   GS  LMC ++M+T +A E GALC V   GMLR  FS  D +I+ LE+ FD ++   QL RA G  E  +VPNTL  A +  +   +V +A  P+ ITH N+AWT L G   +E K    +++ GP E + G    T+   C  +    A  + ++   +   +    ++ YP+ +   G  +H++ +++E+
Sbjct:  233 RANRVRNREHARNTRMRKKQYVESLKLQVGEMLQAKAQEERDAQLETSKISAKRTAMRQMVLNILYLKATEEL------SPRSWACVLDDGFTCVCPITPFRSFPPSEAQEDHRLITGIEGMIQDTASLAVFIKSICPRSRNPTGR-KLKYQFYTSPEDTVVGSNALMCQWLMKTDNATECGALCDVFSHGMLRAHFSP-DNRIKRLEIVFDVMSLMQQLQRAVGQGELRMVPNTLALATQPSQQARLVLSAVPPYGITHTNEAWTALMGHTAEEAKMFPFTLMNGPAEANNGDALETLVQTCIGSNVKRAEMVDLSVVTRDLRRLAVAVQAYPLGTP-DGATTHLLLVMEEI 576          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig911.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C6X3_9STRA2.270e-14661.13BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5K0R4_9PHAE2.640e-11255.90PAS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2FIQ7_9STRA8.730e-7142.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DLD9_9STRA2.610e-6938.73Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CN81_9STRA9.030e-5937.69BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2B104_9STRA2.950e-4933.43Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1D1F4_CYCTE1.570e-4633.69Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2A2E8_9STRA1.610e-4434.06Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3JN17_9STRA1.770e-4233.10Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6H5KUH5_9PHAE5.470e-4233.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig911contigP-wetherbeei_contig911:2..6951 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMT6
PFAMsPAS_9
Model size4414
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons10
Evalue6.81e-125
EggNOG OGs2CY5M@1|root,2S26N@2759|Eukaryota
Ec32 ortholog descriptionPas domain protein
Ec32 orthologEc-02_003600.1
DescriptionPAS domain
Cds size1233
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig911.1.4prot_P-wetherbeei_contig911.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig911 3074..6660 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187076.4091449-UTR-P-wetherbeei_contig911:1..28131683187076.4091449-UTR-P-wetherbeei_contig911:1..2813Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig911 2..2813 +
1683187076.4232075-UTR-P-wetherbeei_contig911:2995..30731683187076.4232075-UTR-P-wetherbeei_contig911:2995..3073Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig911 2996..3073 +
1683187076.5248628-UTR-P-wetherbeei_contig911:6660..69511683187076.5248628-UTR-P-wetherbeei_contig911:6660..6951Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig911 6661..6951 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187076.4333265-CDS-P-wetherbeei_contig911:3073..31451683187076.4333265-CDS-P-wetherbeei_contig911:3073..3145Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 3074..3145 +
1683187076.4437091-CDS-P-wetherbeei_contig911:3436..36671683187076.4437091-CDS-P-wetherbeei_contig911:3436..3667Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 3437..3667 +
1683187076.454268-CDS-P-wetherbeei_contig911:4137..42321683187076.454268-CDS-P-wetherbeei_contig911:4137..4232Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 4138..4232 +
1683187076.464214-CDS-P-wetherbeei_contig911:4500..45871683187076.464214-CDS-P-wetherbeei_contig911:4500..4587Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 4501..4587 +
1683187076.4738004-CDS-P-wetherbeei_contig911:4877..50011683187076.4738004-CDS-P-wetherbeei_contig911:4877..5001Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 4878..5001 +
1683187076.4838233-CDS-P-wetherbeei_contig911:5307..54111683187076.4838233-CDS-P-wetherbeei_contig911:5307..5411Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 5308..5411 +
1683187076.4965932-CDS-P-wetherbeei_contig911:5643..57641683187076.4965932-CDS-P-wetherbeei_contig911:5643..5764Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 5644..5764 +
1683187076.5078053-CDS-P-wetherbeei_contig911:6024..62971683187076.5078053-CDS-P-wetherbeei_contig911:6024..6297Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 6025..6297 +
1683187076.5165744-CDS-P-wetherbeei_contig911:6534..66601683187076.5165744-CDS-P-wetherbeei_contig911:6534..6660Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig911 6535..6660 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig911.1.4

>prot_P-wetherbeei_contig911.1.4 ID=prot_P-wetherbeei_contig911.1.4|Name=mRNA_P-wetherbeei_contig911.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=411bp
MEGMNYTDSSMWGLPNSIQQVFAAVGMPPADTMLPVNEPLSKKPRSEDAG
TTSASESGTDEEERRRIDRERNRQHARNTRARKKAFVDELQAQLTKVTEE
KEAILNAEAAAKNRATQQQAAWITTLRKAMDLRSAGTVDPEAWKAVASED
IKLILPITPYRSFNPTDVISHRRVMLGLEGVVSDTSSLMVMCDLIGSKRR
SKEGRVHIEYLLGTDADNCFFGSEGLMCTFMMRTTDAKEHGALCGVEQTG
MLRVRFSETDGKIEELEMTFDAIAFYHQLMRANGVEEFPLVPNTLQTALK
DEKHHIVVTTAQRPFRITHVNQAWTELCGFELDECKGKNLSILQGPETDM
GTVSGLCALNQQGFAASMIVTNYNKKGEKFRNHLKCYPVASDMSGEISHI
VGILDEVTDQ*
back to top

mRNA from alignment at P-wetherbeei_contig911:2..6951+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig911.1.4 ID=mRNA_P-wetherbeei_contig911.1.4|Name=mRNA_P-wetherbeei_contig911.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=6950bp|location=Sequence derived from alignment at P-wetherbeei_contig911:2..6951+ (Phaeothamnion wetherbeei SAG_119_79)
CACAAGGCCTCTTCCCGCGTCAGATTCGCACCTCAACGCTTCGGCTTCCG GCGAGCGACTGCATCAAAACCGCCGCCGTACTGGAGCGCCTCGACCACCT GGCCGGCGTGATCGGAAGATGGCATCTCGTCTCGCTCCTCTCCAACTGTA TCGTCGCTAATCTTCGCGTCAATACCCCCGTCAATGACCTTCCATCGGGC ATGCAGATCTACAAGCAGGTTTGGGCGGCGCTTGAGGCATATCGGCGCCC GGCCGCGGCGGCCAATTGCCATCCCTTTGCTCCCCAGACGCTACGCTTCC TCGGCTTTGCAGCCCAAGGAGTCATCACGCTGCGCGACCACCTACCGGAG CACGTCCCCGTCGTTCTGCGCAGGCCAGTCACCTTCGCCATGGCGCGCGA CCGTCGAAGCGTTCATCGTCTGCCACCTTCCGGTCGCTGTTCCGAGCGTT CCTGCGCGCCAGCCTCCGGGATGACATGGCGCCGGTGTATTACCCGACCG GATTTTCGGCACTGTACAAGACACAGCAGGTGTGGCGTATCCAGGCAGGC GTGTGTGGACGCCATCGAGAACTTTTCCAACGACTTCGATGACCTGCCGG TCCCTGACTCATTTTGCATGCCCTGGATCGTGTGGGAGCTGCTGTGAGCC CGCAACGCAGCGCAGCGGCTGCCTATCGGCAGCGCATCGACCAGGAGAGG GCGGCCAAGCACGCCATTGAATTGGGCGGCTGGAGCGGTACCAGCGGCAG GAGCGCCCGACGCAGCCGCGGCAGCCCGACGCCGCGACGGCGGGCGATCC CTTTAACCGCACGCTGCATCACCATCCGCAGCTCTTCTTCGACGCGCTCT GTGTCGTTTCGAGGATGAACGAAGACCGCCTGGACAATGCCGTGCGCGTT GCGGCTGGCAACGACGGCGGAAATGGCGGCCTCCAGCCGGCGGTCCAGCC GGCGGTCTAGCCGGCGTCCCAGGGAGTCCCGCCGGCGGTCTAGTCGGCGT TCCAGGGAGTCCTGCCGGCGGCGACGATGGCGGTACAGCCAGCGGCGCTA TCAGCGGCGGCGAGTTGCCGGATGGGCGCGGTGGGCTGCCCAAGCCGTTC ACCTTGCTCCCCCGCTTCGATTTGCAGCCTGCCTTTTGCCACTGCGGCGC CGCGGAGCTTCCCGTGGCGGCGAAGACGGCGAAATGCCGGGCGGCTTGCT GGCGCGGCACCTCTCCGAGAAAGTCCACCGGCGACACGGCAGCGCATGCA TGGCTTCGAGGTCAGCTCGTTCCAGAGCAACGGCATCGAGCTGCAGATCA ACCTCATCGCCGACAAGGAGGACCGGCCGGCGTTCTCCAATGCTGACGGG CTCAGAGAAGTCGGCTACGACTTTGCCGACAAAGGGCCAATCGACGCCGT CGCACAGGACCGCGGCGTCTACACGATGCGGGAGGGCCGCGCTGACTGCA CGCCGCGGCGCTGGTCGTCGTCGACCTGGGCGTCAAGGACGTGCTGTGCG TCACTCCGCATCTGCCAGTACCAGCACGCTGGCAATCCTGTATCCATCGT CAGAAACAGCGACGAAGTCTGGATTGTGAGCGGCGACGAGTAACGCAAGG CGGCGGGCGCCGACCTCAAAGCGAAGCGCGACTGGAAGCGCCGCGGCCGC AAGGGCGGCGACTACGTTGGGGCCATAGCGCGGCTCTCGGCGACGCGCAA AAGGACGGTGCGGCTGGAGCCGTACCTGAGGGCGCTCGCCGACGTCTACA CCATGCTGCAGCGGGAGCTGGCACCCGCGGCCGCCGCAAGACGCGGTGGC TGGTGTCGCGAATGCGCGAGAGCTGGGTGGAGATGACGGCCAAGCGGCTG GTGGCGCCGACGCTGCGGCCCAGCGGCGGCGTCGTGACGTTCGGAGACGC GCACTTCTAGGTGGGGCAGGGTGGTGGCCCGACGAAGGCGCTGGTGGCGG CGGCGGCGCGGCGGCACGCGGTCTTCCTGTCGGGGAGTTTCGGACTTCAA AGATGTGCCCGGGCGGCTGCGGCGGGGAGATGTTGGATGTGCAAGGGGGG GTCAGGGTTTGATGGTGCAATCATGAAACCACGTCGAAGACCTGAACCCT GCTGGCGCATGCCTGCTCTTCGGCCACGGTCTCGGCGGCCCCGGCGTCGC CTTCACCAGCGACCGCGACGAGAGCGCCACGGTCACTATGCAGCTGTGCG TCAGGTGCTGCCTCGACGGCGTCGGCTGGCCGCAGCATCTCAGGTGGAGC GGCGGCGTCGGCCAGGTCGGCAGCGGCCGTGGCGATCCAGACGGCGGTCT CGGCGGCTTGCAGGCACACGCTGCGGGCGGCGGGGGCGCTGCGGGCGATG CGGGTGGCGGCGGAGCGGCCAGCGAAGCTCATAGCGTTTACTCGGGCGCC TGGGGACACCAGTGGACGGCGGACAGCCCCGGAGAAGGCAGTAGTGTGTC CAGACCATTACAGGCAAAGGGGGGCGCCAGGCAGGAATTCTTGAGTAGAT GAGACTGCGAAGCCACCATAGCCCTCGTATTCATCACTTCCAGCATTTCG GTTATTTGGACCTTCTTAGGTTTGGGGGCAGGGGTGTAAAGGAAAATCAC ACACGCATCTTTTTCGTGTCTTCACACTTGTGGGAAACGAAGGAAGAAGC AGAACACGACCAGCAAACCCTTGCCCAAACCCTTGCCCAAAGCATAGCTG ATCTCGTAACTGCCAAACCCGTCGTCAAATCCGTCCCACCCTGCGTGTGT GGTGGGAGGCCCGCTGACAAAATCTGTCGGAAAAGTGGATGAAGGCGGAG GACAAGTGACAGGTACGAAGAGATGGGGGAGCGAAGCTCTTGCCGCAGCT GAGTTGAAGCTCTTGCGACTCCCAAATCATTCTTCGTGCTTTCTGAGAAA ACGAACATCTCTTTCTGTTTACATTGGAGACTTTGGACACAACAAAACAC ACACCCGGCTCCCCGCCGCCTCCCCCACCCGCGTGTGTCACCAGCCAGGA GGACATCGCGAACGAGCCAAAAAACCCACCCCACCGTTTTCAATTCACAC AGCAGCTTCTAGAGCTTCAGCCATGGAGGGGATGAACTACACCGACTCTT CAATGTGGGGCCTTCCCAACAGCATCCAGCAGGTATTCGCCGCGGTGAGT GCGCGATTGACAAGCTTTCACCGCCCTTCTTTTTGTCCAACTTGCCTTTC ATCATTGGGCATCCTTGCGAGTATCTGGAGTGGGCAGCACCACCATTGGG CCTCCGCGCAGTTGCATTTGCTGCGCCTTCTCGAGTAGCCATGGAGATAC CGTCTTTGTGTTGGTGGATAGCTTTGCCTGTTCTCCTAGGAGCCGTTTAC TTATGTGTCTCAAACTTTTGCTTGTGCTCCCGCCCTCGTTACCCTACGCG CACCCTCGCCGCTCGCGGACGGACGGTTTCCGCAGGTCGGCATGCCCCCG GCCGACACCATGCTGCCGGTCAACGAGCCGCTTTCCAAGAAGCCGCGCAG CGAAGATGCCGGCACGACGTCGGCGAGCGAGTCGGGCACGGACGAGGAGG AGCGCCGCCGCATCGACCGCGAGCGCAACCGGCAGCACGCCCGCAACACG CGAGCCCGCAAGAAGGCGTTCGTTGATGAGCTCCAGGCGCAGCTCACGAA GGTCACCGAGGAGAAGGTAAATGACGTTTGTTTTTTATCTAGTGCAAAAA GTTATTGGAAGACATAAGAAATTCGGGAATCACAAAAAGGGTGGGTGGTG CATAAGGCGCAGGAGAGATGCAGAGTGACGATGGGAGCAGAATTGTAGAT CTTGCGTTGCCTTAGCAGGCTCAATTCCGGGTCTTTGGGAGGTTTGAAGG TTCCCAAACCCCCTCAGTCCCATTGGGATCCCCATTTAGCGCTGGCTGTT TTGTTCGAAAGCGACTGGCTCTAAAGCCGGAAAGGGGCGAAAAGAAGGAA CGCTTTTCGTGTTGTCTAGTGCTGAACGTCGCTGATGCCACCATCGCGGC CCCGCCGCCGCCGGCTCTCCGCTCTCGCCGTCCGCCGAACACCGCCGACT CGGCTGTTCTGCTGCTGCCTCTGCCGCCGCCTCCACTGTTCTCGGCGCTG TTCCTGCCGCTGTCCCGTCGTCTGCCTTTTTTGCAGGAGGCCATTCTGAA CGCTGAGGCGGCGGCCAAGAACCGCGCAACTCAGCAGCAGGCGGCGTGGA TCACTACGCTGCGCAAGGCCATGGACCTGCGGTTAGTCCATCCAACGATT CTTGCTTTGTCAAATCCTCCAGTCCCCCGCATGTTTCTCTCCTTTTTTTG GCGCGGGTGTTTCCTGTAAGCGTACGTGGCCGCCATCCCTTTTGGCAGGC CGGAGCGAGCTTATCGCATGCAGAAAGAGAGGTGGTCCGGTCCGCTCACG CCCAGTCCGTCTTTCCCCGACCCCTTGCCTTTTTCCTTCATTCTCGCATG GTTTTTCCCCTTGAACGCTTGTTGCTCGACGCGCAAAATGGGGTGACAGG TCGGCCGGCACGGTGGACCCGGAGGCATGGAAGGCGGTGGCCTCAGAGGA CATTAAACTCATCCTCCCTATCACGCCGTACCGCAGGTGCAGTTTTTGGA GGGATCTGGTCTTTCATTTGTGGCGGTACAGAAAACCTTTATTTTGGAAA AGATCATTTTAAGCTTGTCGCTCCCGGGACTGCACTGGTTCCATGTACAA AGTCGACCCGCCCCGACTGCTGCACCTGCTCTGAACTGCCGCAAGGCAAA CCGTCCCACCTTCCCTCACCCCCGGCCACCTCCTTCCCCTCCTCCGTTTC GGCGCCGTTTCGCTGCTGTTTCATCGACGTTTTGCCGCCATTTTCTCCGC CGTTCCGTTTCGTTGCTCTGCTGCAGCTTCAACCCGACGGACGTGATCAG CCACCGGCGCGTCATGCTGGGCCTCGAGGGCGTTGTCTCCGACACGAGCT CCCTCATGGTCATGTGCGACCTCATCGGCTCCAAACGCCGCTCGAAGGAG GTGCGTACGTCCGTGCGTCCGTTCGCTTGCGACGTGCCGTCGGCCGTTGT CGTGTGGTGTGTGGCGGGGGTGCTTGGCAGACGGGTTGTGGACGGATGCG CGGCGGCAGCGATTCGATGGCAGGTTGGCGGCGGCACGACGGTTCGGCGA TTCGGCTACAGCAAGATGGCGATGCCGCGATTCGGCACATTTTCGGTTGT TTTCGTTGATAGAATTGGAAATAGTGCGGATGCGGTGGACTCGAATTATT GCTTTTTGGCTGCCATCGGCTCACTTGTTCGGTCCCCGTTCACCCGGTCA TTGCAGGGACGCGTGCACATCGAGTACCTGCTGGGCACGGACGCGGACAA CTGCTTCTTCGGGTCCGAGGGTCTCATGTGCACTTTCATGATGCGCACCA CCGATGCAAAGTGAGCAGTTTGTTTAGGGATATGTATCTATCAGACTGTT CGCTTTTCAACACCACTGGGTGCCAAGCTATCCGACTTGTCTGTTTCTTC CGCACCACCGGACGCCAAGGAAGTGACTTACTGACGCTCTTCTTCGTCCT GCCTGCGCTCGCCCGCGCTTGCCTGCGCCGTCTGCCGATGTCACTCATCG TCCGGTGTCCGCCGCAATCAACCAATCTGCGATACCAACCAGGGAGCACG GTGCACTGTGCGGCGTGGAGCAGACGGGCATGCTGCGCGTGCGCTTCAGC GAGACGGATGGCAAGATCGAGGAGCTTGAGATGACCTTTGACGCCATCGC CTTCTACCATCAGGTCTGTCTTTCCGGTCTCTCGGTCGTTTCGATTTAGT TTTCGCTTTCGATTTCAGTTCAGTCGATAACTCGACCTAATGTTGTAACT GACGCGTGATCGGTTCCAGGCCAACACGCGATTCACGGTCAACGGATCTT AAGGTTGCCGACGGGTTCTCCAGCGCAGCTCCCGTGTTGGCTGACCTAAG CGACGCCGACTCACTAATTCCTCTGTTGCTCCTCTCCTCTCCTTGCTCTG CCGAACGAAACTGCATTGCGCAGCTGATGCGTGCCAACGGCGTTGAGGAG TTCCCGCTGGTGCCCAACACGCTCCAGACGGCCCTCAAGGACGAGAAGCA CCACATCGTCGTCACGACGGCGCAGCGCCCCTTCCGCATCACGCACGTCA ACCAGGCGTGGACGGAACTGTGCGGTTTTGAGCTCGATGAGTGCAAGGGC AAGAACCTGTCCATCCTGCAGGGGCCGGAGACGGACATGGGCACCGTGTC CGGCCTATGCGCGCTCAATCAGCAGGGCTTCGCCGCCTCCATGATCGTAA GTTGTCTTTCGGTCTTTTCTTTTCTTCTTTTGGCAAGTCTGCTTTCTTCT TTTCGTCCCATGGTGTGCTGCTGGCGCTTTCCGGCCTAGTGCGTCCCGGC TGCCCGTCTGGTTCTGTTTAGCGCATTCTGCCCTTGTCTGACCTCTTCAC CTTCCCTCCGTTTTCCTCTTTTCTCTGTTCTGTTTTTCTTGTGCTGTTTT CTGCTTTCCGCCCTTTTTTGTCAACAACTCCAGGTGACAAACTACAACAA GAAGGGCGAGAAGTTCCGCAACCACTTAAAGTGTTACCCGGTTGCCTCGG ACATGTCAGGCGAGATCAGCCACATCGTCGGCATCCTTGACGAGGTCACC GACCAGTAACGACCGGTAAGCGGTCGGTAACTGGCCGGTAACCGACCGGT AACCCACCAACCGCCTGACCTGAGGTCGGTGGTCGGCGTCCAATTGTGAC CGACTGGATCAGTCCATCCATCAATCACCGACCAATCAATTATCATCGGT GAATGACTGATCGCTGACGACGGTTCGCCGGCGGGGCGGGCGGGTGGAAC GGGACCGGGCGGGCCGGAAAATGGGGCGGAGCAGAGCGGTGGAGAAAGCC GACCCTGCCTTAAAATCCCGAGCCCCTTAAACCAAGAGTTGGCGGGCGGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig911:2..6951+

>mRNA_P-wetherbeei_contig911.1.4 ID=mRNA_P-wetherbeei_contig911.1.4|Name=mRNA_P-wetherbeei_contig911.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1233bp|location=Sequence derived from alignment at P-wetherbeei_contig911:2..6951+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGGGATGAACTACACCGACTCTTCAATGTGGGGCCTTCCCAACAG
CATCCAGCAGGTATTCGCCGCGGTCGGCATGCCCCCGGCCGACACCATGC
TGCCGGTCAACGAGCCGCTTTCCAAGAAGCCGCGCAGCGAAGATGCCGGC
ACGACGTCGGCGAGCGAGTCGGGCACGGACGAGGAGGAGCGCCGCCGCAT
CGACCGCGAGCGCAACCGGCAGCACGCCCGCAACACGCGAGCCCGCAAGA
AGGCGTTCGTTGATGAGCTCCAGGCGCAGCTCACGAAGGTCACCGAGGAG
AAGGAGGCCATTCTGAACGCTGAGGCGGCGGCCAAGAACCGCGCAACTCA
GCAGCAGGCGGCGTGGATCACTACGCTGCGCAAGGCCATGGACCTGCGGT
CGGCCGGCACGGTGGACCCGGAGGCATGGAAGGCGGTGGCCTCAGAGGAC
ATTAAACTCATCCTCCCTATCACGCCGTACCGCAGCTTCAACCCGACGGA
CGTGATCAGCCACCGGCGCGTCATGCTGGGCCTCGAGGGCGTTGTCTCCG
ACACGAGCTCCCTCATGGTCATGTGCGACCTCATCGGCTCCAAACGCCGC
TCGAAGGAGGGACGCGTGCACATCGAGTACCTGCTGGGCACGGACGCGGA
CAACTGCTTCTTCGGGTCCGAGGGTCTCATGTGCACTTTCATGATGCGCA
CCACCGATGCAAAGGAGCACGGTGCACTGTGCGGCGTGGAGCAGACGGGC
ATGCTGCGCGTGCGCTTCAGCGAGACGGATGGCAAGATCGAGGAGCTTGA
GATGACCTTTGACGCCATCGCCTTCTACCATCAGCTGATGCGTGCCAACG
GCGTTGAGGAGTTCCCGCTGGTGCCCAACACGCTCCAGACGGCCCTCAAG
GACGAGAAGCACCACATCGTCGTCACGACGGCGCAGCGCCCCTTCCGCAT
CACGCACGTCAACCAGGCGTGGACGGAACTGTGCGGTTTTGAGCTCGATG
AGTGCAAGGGCAAGAACCTGTCCATCCTGCAGGGGCCGGAGACGGACATG
GGCACCGTGTCCGGCCTATGCGCGCTCAATCAGCAGGGCTTCGCCGCCTC
CATGATCGTGACAAACTACAACAAGAAGGGCGAGAAGTTCCGCAACCACT
TAAAGTGTTACCCGGTTGCCTCGGACATGTCAGGCGAGATCAGCCACATC
GTCGGCATCCTTGACGAGGTCACCGACCAGTAA
back to top