mRNA_P-wetherbeei_contig9092.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9092.1.1
Unique NamemRNA_P-wetherbeei_contig9092.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A835YKQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ5_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.130e-77
Identity = 153/311 (49.20%), Postives = 202/311 (64.95%), Query Frame = 1
Query:    1 MADLEEQLLKKNIPGKYSWWDPDDDEVGPNARTDWLDPDASDPEQDMSEVDRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTAAKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGCRI--------PVEDPLAAVAADAASAAEEEAED--EFLRRNRATRLAQLRAAADRPQFGAVREVDRSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLS---TAADAD-YDPVALPTLLVYRRGEVVACVTRITDDLGDEFT 891
            M+ LE+Q+LK+NIPGKYSWW+ D DE GP AR +W DPDASDPEQ+++E+++Q+K+VEAD P+PVRR+IMA  AE++R      A+TG KGVL D+ A +A+E A  Q+ ++YR AAL+R+A G  +        P  DP      DA    ++E  D  +FL   R  RL +L+A+A RP FG ++E  R +FV  VD VD R +VVVH+YEPY++ACQ +NRHLE+L R  P                         SVKFLR+LS   +  D + YDPVALPTL+VYR  E+VAC TR+TDDLGD FT
Sbjct:    1 MSTLEDQILKQNIPGKYSWWEKDTDEAGPKARAEWFDPDASDPEQELTELEKQKKWVEADCPDPVRRTIMA-RAEKER------ARTGVKGVLADHAAYQASEMADHQLQQQYRAAALQRMAGGHVVANSAPHFVPKTDP------DAEDGDDDEDGDLNDFLSEYRKQRLLELQASAHRPIFGQIQEASRGDFVEQVDNVDPRCYVVVHLYEPYIKACQAMNRHLEVLAREYP-------------------------SVKFLRMLSGDVSGGDEEGYDPVALPTLMVYRAKEIVACFTRVTDDLGDTFT 273          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A6H5K0Z4_9PHAE (Phosducin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z4_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 3.730e-73
Identity = 147/307 (47.88%), Postives = 195/307 (63.52%), Query Frame = 1
Query:    1 MADLEEQLLKKNIPGKYSWWDPDDDEVGPNARTDWLDPDASDPEQDMSEVDRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTAAKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGCRIPVEDPLAAVAADAASAAEEEAE---------DEFLRRNRATRLAQLRAAADRPQFGAVREVDRSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLSTAADA-DYDPVALPTLLVYRRGEVVACVTRITDDLGDEFT 891
            M DLE+++LKKNIPGKY+WW+ D DE G  AR DW+D +ASDPE++M+E+++Q+K+V+ D PEP+RR+IMA + E++R      A+TG KGVL D+ A K +  A+  + +EYR A L+R+AEG  +P   PLAA                       + FL   R  RL QL+A A RPQFG + E +RS FV AVD  D RT VVVH+YEPY+ AC+R+NR LE+L  + P                         +VKFLRL S+AA+  DYDPVALPTLL+YR GEVV C+TR+TDD+G+ FT
Sbjct:    1 MGDLEDKILKKNIPGKYTWWEKDSDEEGETARADWVDREASDPEREMTEMEKQKKWVDNDCPEPIRRTIMARQ-EKER------ARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMAEGHTVP--GPLAATTIXXXXXXXXXXXXXXXXXXXXEGFLGSYRRRRLEQLKATAGRPQFGQIVEAERSTFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEVLAAKQP-------------------------TVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGENFT 273          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A7R9UGG9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG9_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.690e-44
Identity = 121/300 (40.33%), Postives = 159/300 (53.00%), Query Frame = 1
Query:   10 LEEQLLKKNIPGKYSWWDPDDDEVGPNARTDWLDPDASDPEQDMSEVDRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTAAKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGCRIPVEDPLAAVAADAASAAEEE-----AEDEFLRRNRATRLAQLRAAADRPQFGAVREVDRSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLST----AADADYDPVALPTLLVYRRGEVVACVTRITDDLGD 882
            LE+++LKKNIPGKYSWWD +DD  G     +  DPD    E+   ++D QR   +A  PEPVRR+ M+     +         TG KGVL D+   +  E A+   D   R AAL+R A G         A  AAD  + A  E     ++DEFL R R  R++QL AAA  P FG V EV   +FV  VDAVD R  VVVH+YEP+V  C ++NR LE+L RR P                         SVKFLR+ +         ++D +ALPTLLVYR G+ VA + R+ D++G+
Sbjct:    3 LEDKMLKKNIPGKYSWWDDEDDHRGXXXXGEVQDPD----EEGKDDLDVQRALQDA--PEPVRRACMSQRVREKDN-------TGVKGVLRDFEEWRDEEDAKETSDAMRRNAALQRAARG---------AIRAADGGAHANVENADIDSDDEFLERYRRQRMSQLMAAAAAPTFGEVAEVSGDDFVETVDAVDPRAFVVVHLYEPFVHLCTKMNRVLEILARRQP-------------------------SVKFLRMRADECRRTTGQEFDAIALPTLLVYRGGQTVATIVRVQDEVGE 255          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A7S2B798_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B798_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.440e-40
Identity = 122/316 (38.61%), Postives = 169/316 (53.48%), Query Frame = 1
Query:   10 LEEQLLKKNIPGKYSWWDPDDDEV--GPNARTDWLDP-----DASDPEQDMSEVDRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTA------AKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGCRIPVEDPLAAVAADAASA-----AEEEA----EDEFLRRNRATRLAQLRAAADRPQFGAVREVDRSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLSTAADADYDPVALPTLLVYRRGEVVACVTRITDDLGDEFT 891
            LE+++L+ NIPG+Y+ WD DDDE   G N R +W+DP     +A    Q M+E  R  + V AD+    +R I AG  E    VAKT+      AKTGPKGVLNDY+  K  E+  +Q+D+ +REA L R+A G        LA    DA  A     AEEEA    E++FL + R  R+ +L++A+ +P FG + EV   E+  A+D  D R  VVVH+YE YV+ C R+NR  E L R    V                         KF+RL ST + + +DPV LPT+ VY+ G++     R+ D +G  F+
Sbjct:   14 LEDKMLRTNIPGRYTQWDKDDDEEEGGKNYRAEWIDPGEGADEAGAAGQPMNESQRMERDV-ADL----QRKIAAGMPET---VAKTSYAHQMGAKTGPKGVLNDYKEHKRIEAHNKQVDKLHREAVLNRMAYGATASNTLSLAQERIDAQVAQQEREAEEEADAAEEEDFLSKFREARIRELQSASTQPVFGNIVEVAAHEYCEAIDKCDPRVFVVVHIYEDYVKECGRMNRCFEELARSYTNV-------------------------KFVRLKSTESPSPFDPVTLPTICVYKAGDLCNSFVRVQDTVGTNFS 296          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A7S2RCN5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCN5_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.190e-31
Identity = 110/306 (35.95%), Postives = 148/306 (48.37%), Query Frame = 1
Query:   10 LEEQLLKKNIPGKYSWWDPDDDEVGPNART---------DWLDPDASD-PEQDMSEVDRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTAAKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGC-RIPVEDPLAAVAADAASAAEEEAEDEFLRRNRATRLAQLRAAADRPQFGAVREVDRSE-FVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLSTAADADYDPVALPTLLVYRRGEVVACVTRITDDLGDEFT 891
            LE+++LK+NIPG+YS WD D  E G   R          +  + DA D   Q+M +V + +++ E  VPE    ++   E  R  G      +TGPKGVL DYR  +  E  +R      REA LRRIA G  R   E                 AE + LRR R  R  +L+AAA  P FG VREV   + F+ A+D  D+R  VVVH+Y+  V AC+ +NR  E L R    V                         KFLRL + AA   +D   +P L +YR G++ AC  R+TD +G+ FT
Sbjct:   29 LEDKILKRNIPGRYSTWDAD--EAGTERRAAAREEEDTVEREEEDAGDGATQEMRDVGKMQEYAEHGVPE----TLSKNEYARAHGH-----RTGPKGVLTDYREHQVHEHVERLAADAEREAVLRRIAYGASREDAEXXXXXXXXXXXXXXXXXAEQDILRRLREQRRRELQAAASMPVFGEVREVTADDHFLEAIDKEDSRVFVVVHIYDEAVPACRSMNRCFERLARSHSHV-------------------------KFLRLQAAAAPTTFDADVMPVLSIYRSGDMHACCVRVTDQVGERFT 298          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A6U3QXS5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QXS5_9STRA)

HSP 1 Score: 118 bits (296), Expect = 8.300e-26
Identity = 99/305 (32.46%), Postives = 145/305 (47.54%), Query Frame = 1
Query:    1 MADLEEQLLKKNIPGKYSWWDPDDDEVGPNARTDWLDPDASDPEQDMSEVDRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTAAKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGCRIPVEDPLAAVAADAASAAEEEAED---------------EFLRRNRATRLAQLRAAADRPQF-GAVREVDRSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLSTAADADYDPVALPTLLVYRRGEVVACVTRIT 867
            M+ LE+++LK+NIPGKYSWWD +DDE  PN           +    ++EV++ +++    VP+P++ S + G      G    +  TG KGVLNDYR  +A ES  RQ++   R+  LRR  EG  +   D    VA  AA                        EFL+  R  RL QL+     P + G V EV   E+   VD +D R H +VH+YEP +R C +LN  LE           S++ +A                 KF++L +  A  + D + LPT+++YR G +   + R T
Sbjct:    1 MSGLEDRILKQNIPGKYSWWD-NDDEARPNXXXXXXXXXXXE-NNSLNEVEQVKQWDAQGVPKPLQISALEGGPVPHNGG--KSQNTGAKGVLNDYRQTRAIESHNRQVEALERQDLLRRATEGATLQQGD----VAMSAAXXXXXXXXXXXXXXXXXXXXXXXXEFLKNYRKNRLRQLQLTTHWPSYDGKVEEVTPEEYSSLVDTIDPRVHFIVHLYEPSIRDCVKLNSMLERCA--------SLKKYA-----------------KFVKLRALDAKPNMDCIVLPTIMIYRGGNLEHNLVRFT 272          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A7S1CQF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQF6_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.140e-25
Identity = 107/329 (32.52%), Postives = 147/329 (44.68%), Query Frame = 1
Query:    1 MADLEEQLLKKNIPGKYSWWDPDDDEVGPNARTDWLDPDASDPEQDMSEVDRQ----RKFVEADVPEPVRRSIMAGEAERQRGVAKTAA---KTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGCRIPVEDPLAAVAADAA--SAAEEEAEDE------------------------FLRRNRATRLAQLRAAADRPQFGAVREVDRSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLSTAADADYDPVALPTLLVYRRGEVVACVTRITDDLGDEF 888
            MADLE ++++ N+       D D DE GP AR         + + D SE D +             EP+  + M G       V   A     TGPKGV+ DYR  K  E  +R+ D   R   + + A G  +    P  A +A AA   A  +  +D+                        FLR  RA RLAQ+RAA+ R  +G V+EV ++ FV  VD  D R  VVVH+YE ++ AC ++NR L  +  R P                           KFLRL++T AD DYD + LPTLL+YR GE V  + R+ D + + F
Sbjct:    5 MADLERRIMRPNLMR-----DADSDEEGPRAR-------GVEDDSDFSESDDEGGXXXXXXXXXXGEPM--TAMPGSTGLPAPVEDVATGRHNTGPKGVIEDYRQHKRQERVKRERDELKRAELIAKTATG--VEAAGPSVAYSATAAVREATMKHRDDDASXXXXXXXXXXXXXXXXXXXXXXFLREYRARRLAQMRAASGRTTYGGVKEVSKATFVDEVDRTDPRAFVVVHMYETFIPACVQVNRALPEVAARRPYT-------------------------KFLRLVATDADKDYDHITLPTLLLYRGGETVEALVRVADGMPEGF 292          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A7S3GW90_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW90_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.960e-25
Identity = 106/320 (33.12%), Postives = 152/320 (47.50%), Query Frame = 1
Query:    1 MADLEEQLLKKNIPGKYSWWDPDD-----DEVGPNARTDWLDPDASDP-EQDMSEVDRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTAAKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGCRIPV-----EDPLAAVAADAASA--AEEEAEDEFLRRNRATRLAQLRAAADRP----------QFGAVREVDRSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLSTAADADYDPVALPTLLVYRRGEVVACVTRITDDLGDEFT 891
            M DLEE + ++N+PGKYS WD  D     DE  P  + D +  +   P + DM  +   ++   A+VPE +R+SI+A   ER R  A     TG KGVL DYRAA+A   A+ Q    +R+  L R+ +G ++       ED  A +  +   +        D F+R  RA RL +LR A+              FG+V+EV   +FV  V+       VVVH+YEP V+ C RLN  L+ +    P                         ++KFLR+ +++ +   D VALP L VYR GE +  +  I  D G  FT
Sbjct:    1 MGDLEETIFQRNVPGKYSKWDDVDRNEFHDE--PTEKYDQVPAETERPKDSDMELLQYAQQLSNAEVPETIRQSILA---ERARMTA-----TGVKGVLADYRAAQAMAEAEAQAIALHRQQVLTRMTQGAKVQYVAEEEEDETAGLDINDIDSDXXXXXXXDAFMREFRAKRLQELRGASSSSAGANYTEQTSMFGSVKEVRAEDFVQEVEGEKRNVVVVVHLYEPSVQTCIRLNVLLDEIAASQP-------------------------TIKFLRMQASSNEIVVDRVALPILTVYRGGETIETLAGIAADFGQYFT 285          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A482SBJ0_9ARCH (Phosducin domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBJ0_9ARCH)

HSP 1 Score: 110 bits (275), Expect = 1.400e-23
Identity = 99/320 (30.94%), Postives = 148/320 (46.25%), Query Frame = 1
Query:    1 MADLEEQLLKKNIPGKYSWW---------DP-----DDDEVGPNARTDWLDPDASDPEQDMSEVDRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTAAKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEG--CRIPVEDPLAAVAADAASAAEEEAEDEFLRRNRATRLAQLRAAADRPQFGAVREVD-RSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLSTAADADYDPVALPTLLVYRRGEVVACVTRITDDLGDEFTMVRFLH 909
            M D+EE + + N+PGKYS W         +P     D+DE G N   D LD D   PE     VD   +  ++ +P+ ++ SI+    ++          TG KG+L D++A +  E  +R      R AAL R A G   + P E+       D  +  +EE +D+FL   RA RLAQL+++   P +G V+E+    E +  ++  D R +VV+H+YE  V +C R+N+ LE L  R P V                          F+R+ ++    + D   LP L VYR GE V  V  I+   G  FT+    H
Sbjct:    2 MDDIEETMFQANVPGKYSTWKEEQDDLRHEPTDTTEDNDEDGDN---DVLDVDYDLPEGSGENVDLGMRLQQSSLPDNIKMSILQERMQKHN--------TGVKGMLADHKAIQQLEKQERIQKENDRNAALFRAAHGHIVKKPAEEN---TNEDIDALLDEEEDDDFLASYRAARLAQLKSSISLPTYGHVQEITTHDELLDILEHTDKRVYVVIHLYETSVTSCVRMNKFLEELAVRKPNVL-------------------------FVRMYASQNGIEVDISTLPVLTVYRAGECVEGVAGISAQYGQYFTIADVEH 282          
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Match: A0A4V1IRF4_9FUNG (Thioredoxin-like protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1IRF4_9FUNG)

HSP 1 Score: 95.5 bits (236), Expect = 2.800e-18
Identity = 90/252 (35.71%), Postives = 117/252 (46.43%), Query Frame = 1
Query:  142 SEVDRQRKFVEADVPEPVRRS----IMAGEAERQR-GVAKTAAKTGPKGVLNDYRAAKAAESAQRQMDREYREAALRRIAEGCRIPVEDPLAAVAADAASAAEEEAEDEF--LRRNRATRLAQLRAAADRPQFGAVREVDRSEFVGAVDAVDARTHVVVHVYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFSVKFLRLLSTAADADYDPVALPTLLVYRRGEVVACVTRITDDL 876
            S++D     ++   P P  RS    I +  A RQR G+    A TGPKGVL D+R   A E A             RR   G  +  E              EE+  DE   L   RA RLA+LR  A  P+FG V+EVD   +V A+D+  A   VVVH+YE  + AC+ LN  L  L  R                    H +      KFLR++S  ADA +DPVALP LLVYR G +V  + R+ D++
Sbjct:   31 SDIDIDDDPIDTTAPPPDPRSESTRIASDNALRQRLGIG--GAFTGPKGVLADHRFHAAQERA-------------RRTGGGALVDAE-------------LEEDEADELRLLAHRRAQRLAELRRRATGPRFGVVQEVDVDTYVSAIDSEPADVTVVVHLYEREIAACRMLNDLLVPLAAR--------------------HDT-----TKFLRIVSRKADARFDPVALPALLVYRGGALVLSLMRVVDEI 229          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9092.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKQ5_9STRA1.130e-7749.20Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A6H5K0Z4_9PHAE3.730e-7347.88Phosducin domain-containing protein n=2 Tax=Ectoca... [more]
A0A7R9UGG9_9STRA1.690e-4440.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2B798_9STRA1.440e-4038.61Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RCN5_9STRA2.190e-3135.95Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A6U3QXS5_9STRA8.300e-2632.46Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S1CQF6_9STRA1.140e-2532.52Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3GW90_9STRA2.960e-2533.13Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482SBJ0_9ARCH1.400e-2330.94Phosducin domain-containing protein n=1 Tax=archae... [more]
A0A4V1IRF4_9FUNG2.800e-1835.71Thioredoxin-like protein n=1 Tax=Blyttiomyces heli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9092contigP-wetherbeei_contig9092:477..2629 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LEJ7
Preferred namePDCL
PFAMsPhosducin
Model size1445
Max annot lvl2759|Eukaryota
KEGG koko:K08327,ko:K15690
Hectar predicted targeting categoryother localisation
GOsGO:0001750,GO:0003008,GO:0003674,GO:0004857,GO:0004859,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005929,GO:0006139,GO:0006457,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007600,GO:0007601,GO:0007602,GO:0008150,GO:0008152,GO:0008277,GO:0008589,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0016043,GO:0018130,GO:0019438,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030234,GO:0032501,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042995,GO:0043005,GO:0043086,GO:0043226,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0045880,GO:0046116,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051606,GO:0051716,GO:0055086,GO:0055102,GO:0061083,GO:0061084,GO:0065003,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098772,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1902605,GO:1903332,GO:1903333
Exons3
Evalue4.82e-76
EggNOG OGsKOG3171@1|root,KOG3171@2759|Eukaryota
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-21_004390.1
Descriptionheterotrimeric G-protein complex assembly
Cds size1113
COG categoryS
BRITEko00000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187075.4217536-CDS-P-wetherbeei_contig9092:476..11551683187075.4217536-CDS-P-wetherbeei_contig9092:476..1155Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9092 477..1155 +
1683187075.4317925-CDS-P-wetherbeei_contig9092:1386..14571683187075.4317925-CDS-P-wetherbeei_contig9092:1386..1457Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9092 1387..1457 +
1683187075.4398658-CDS-P-wetherbeei_contig9092:1934..22971683187075.4398658-CDS-P-wetherbeei_contig9092:1934..2297Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9092 1935..2297 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187075.4478338-UTR-P-wetherbeei_contig9092:2297..26291683187075.4478338-UTR-P-wetherbeei_contig9092:2297..2629Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9092 2298..2629 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9092.1.1prot_P-wetherbeei_contig9092.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9092 477..2297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9092.1.1

>prot_P-wetherbeei_contig9092.1.1 ID=prot_P-wetherbeei_contig9092.1.1|Name=mRNA_P-wetherbeei_contig9092.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=371bp
MADLEEQLLKKNIPGKYSWWDPDDDEVGPNARTDWLDPDASDPEQDMSEV
DRQRKFVEADVPEPVRRSIMAGEAERQRGVAKTAAKTGPKGVLNDYRAAK
AAESAQRQMDREYREAALRRIAEGCRIPVEDPLAAVAADAASAAEEEAED
EFLRRNRATRLAQLRAAADRPQFGAVREVDRSEFVGAVDAVDARTHVVVH
VYEPYVRACQRLNRHLELLCRRLPEVTLSIRSFAFGFAFCCLHPSCFAFS
VKFLRLLSTAADADYDPVALPTLLVYRRGEVVACVTRITDDLGDEFTMVR
FLHFFLSLSTVSSLFLSARAPSFLYSAVSSLLFLQLLLGAAVWLPPALRW
LPLGRASRASRCFRGLVSSV*
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mRNA from alignment at P-wetherbeei_contig9092:477..2629+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9092.1.1 ID=mRNA_P-wetherbeei_contig9092.1.1|Name=mRNA_P-wetherbeei_contig9092.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2153bp|location=Sequence derived from alignment at P-wetherbeei_contig9092:477..2629+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGACCTCGAGGAGCAGCTGCTGAAGAAGAACATCCCAGGCAAATA CAGCTGGTGGGATCCGGACGACGACGAGGTAGGGCCTAACGCCCGCACGG ACTGGCTGGATCCGGACGCGAGCGATCCCGAACAGGACATGTCCGAGGTG GATAGGCAGCGCAAGTTTGTGGAGGCGGACGTCCCGGAGCCCGTGCGGCG CAGCATCATGGCCGGCGAGGCCGAGCGGCAGCGCGGCGTGGCCAAAACTG CCGCGAAGACTGGTCCGAAGGGCGTGCTGAACGACTACCGCGCCGCCAAG GCCGCGGAGAGCGCTCAGCGCCAGATGGACCGCGAATATCGCGAGGCTGC CCTTCGGCGCATCGCCGAGGGCTGCCGCATCCCGGTCGAAGACCCGCTCG CCGCCGTCGCCGCAGATGCCGCATCAGCCGCCGAAGAGGAGGCGGAGGAC GAGTTCCTGCGCCGCAACCGCGCCACGCGTCTCGCACAGCTGCGCGCTGC TGCCGACCGCCCGCAGTTCGGCGCCGTGCGCGAAGTGGACCGCTCGGAGT TCGTCGGCGCGGTCGACGCGGTCGACGCGCGAACGCACGTCGTGGTGCAC GTGTACGAACCGTACGTGCGCGCATGTCAGCGGCTGAACCGCCATCTCGA GCTGCTCTGCCGCCGCCTTCCCGAGGTGAGTGAGCTGCGCGCAGTTCTTA GGAGCTTTCTCTGAAAGTTCTCGGTTTTGCAAAGGCCTGTTTTGCATGTA TTTCTGGGCTTGCCTCTCTTCGTGATGGGCTTGCTTCTCTTGTCATCATT TATGCCTTCTACAGTTATGTTGAATATGTTGCTTGCTCCCCTTCTCCTTT CATTTGTGCAGCAGCAGACTGTAGCATTTCTCCTCCTGTTCGCTGGTGGG GTCTTTCCAGCACTTTCGATTCGTTCTTTCGCATTCGGTTTTGCATTCTG TTGCCTTCACCCTTCGTGCTTCGCTTTTTCTGTTTCCCCATCACCTCGAT GACGGAGACTCATTTGCGAGCTTTGCAAAAGATTTACCGAAGCGCGCCGT CGTGCTTAGGAATTGGTTCTCGTTTGCTACCAAGTTTCGAAATGAGGGGA CACATTTCCTGCCCACACTTCGCACCAAGATTCGTAGGCAAACTGCTTTT CTTCTTTCTTGACAATTTCCCGTGCAGCTCGTTTTTTGGTCGGTCGACCC CCTTCATGTTCGTGGAGCTGTCTCGCGCGTTCTGTGACACACACGGATTT TTCTCCTCGTTCGTTTTCTCGATTCTCACTGCGTCGCGTCTTTTTTCTCT AGTGCCGGCGCCGCGGGGGGCGCAACACCAACGCGCCGACCGCTCGACTG CCTTTCTCTCCCATCCGGACCCTCCCACGCGCGCCAATTATTGCTCCGCC AATGTAAAAAATGCCGAAATTCTGAATGAAAATCACCGGTCAATAAACCC CACCTTAGGTGAAGTTTCTGCGGCTGTTGAGCACGGCGGCGGACGCGGAC TACGATCCGGTGGCGCTGCCGACGTTGCTCGTCTACCGCCGCGGCGAGGT GGTGGCATGCGTGACTCGCATCACGGACGACCTCGGTGACGAGTTCACCA TGGTGCGCTTTCTTCATTTTTTTCTTTCTCTTTCCACTGTTTCGTCCCTG TTTCTTAGCGCCCGGGCGCCCTCTTTCCTGTACTCGGCAGTTTCTTCGCT TCTCTTCTTGCAACTGTTGTTGGGTGCGGCAGTCTGGTTGCCGCCGGCGC TGCGTTGGCTGCCACTTGGTCGAGCTTCGCGGGCATCACGTTGCTTTCGT GGATTGGTTTCTTCTGTGTGATGCCGAACGTCTTCCCTGGGCAGCTTTTT GACTTTATTAAATTGGCAGCCATCTCGAGCAGCTTACCGCTCTGTTCCCT CCCACCTGCTTCGCTGCTCGGGTGCCACAATGTCGCTGCTGGGGCTGCGG CGGCGATGGCTATGGCGCGCATCGGCGGCGTGGGATTACGCCGGCACGGG ATGGCATCATGCCGGCGGACATCGTGTGACGCTGCGGCATTGGAAACCCT GGTGGATGCGGCGGCGGCACTACTCCGGTGCCGGCGGTATGGACGGCGGC GGGCTTGGCTCCGCCTCTGGCTTCGTCGGCGCTGCGCATGTTTCGCCATT TTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9092:477..2629+

>mRNA_P-wetherbeei_contig9092.1.1 ID=mRNA_P-wetherbeei_contig9092.1.1|Name=mRNA_P-wetherbeei_contig9092.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1113bp|location=Sequence derived from alignment at P-wetherbeei_contig9092:477..2629+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGACCTCGAGGAGCAGCTGCTGAAGAAGAACATCCCAGGCAAATA
CAGCTGGTGGGATCCGGACGACGACGAGGTAGGGCCTAACGCCCGCACGG
ACTGGCTGGATCCGGACGCGAGCGATCCCGAACAGGACATGTCCGAGGTG
GATAGGCAGCGCAAGTTTGTGGAGGCGGACGTCCCGGAGCCCGTGCGGCG
CAGCATCATGGCCGGCGAGGCCGAGCGGCAGCGCGGCGTGGCCAAAACTG
CCGCGAAGACTGGTCCGAAGGGCGTGCTGAACGACTACCGCGCCGCCAAG
GCCGCGGAGAGCGCTCAGCGCCAGATGGACCGCGAATATCGCGAGGCTGC
CCTTCGGCGCATCGCCGAGGGCTGCCGCATCCCGGTCGAAGACCCGCTCG
CCGCCGTCGCCGCAGATGCCGCATCAGCCGCCGAAGAGGAGGCGGAGGAC
GAGTTCCTGCGCCGCAACCGCGCCACGCGTCTCGCACAGCTGCGCGCTGC
TGCCGACCGCCCGCAGTTCGGCGCCGTGCGCGAAGTGGACCGCTCGGAGT
TCGTCGGCGCGGTCGACGCGGTCGACGCGCGAACGCACGTCGTGGTGCAC
GTGTACGAACCGTACGTGCGCGCATGTCAGCGGCTGAACCGCCATCTCGA
GCTGCTCTGCCGCCGCCTTCCCGAGGTGACACTTTCGATTCGTTCTTTCG
CATTCGGTTTTGCATTCTGTTGCCTTCACCCTTCGTGCTTCGCTTTTTCT
GTGAAGTTTCTGCGGCTGTTGAGCACGGCGGCGGACGCGGACTACGATCC
GGTGGCGCTGCCGACGTTGCTCGTCTACCGCCGCGGCGAGGTGGTGGCAT
GCGTGACTCGCATCACGGACGACCTCGGTGACGAGTTCACCATGGTGCGC
TTTCTTCATTTTTTTCTTTCTCTTTCCACTGTTTCGTCCCTGTTTCTTAG
CGCCCGGGCGCCCTCTTTCCTGTACTCGGCAGTTTCTTCGCTTCTCTTCT
TGCAACTGTTGTTGGGTGCGGCAGTCTGGTTGCCGCCGGCGCTGCGTTGG
CTGCCACTTGGTCGAGCTTCGCGGGCATCACGTTGCTTTCGTGGATTGGT
TTCTTCTGTGTGA
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