mRNA_P-wetherbeei_contig9.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9.5.1
Unique NamemRNA_P-wetherbeei_contig9.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: A0A3C0TX45_9PROT (Chorismate mutase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TX45_9PROT)

HSP 1 Score: 380 bits (977), Expect = 3.010e-130
Identity = 193/292 (66.10%), Postives = 229/292 (78.42%), Query Frame = 1
Query:    4 DSPDTLAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTGREALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIECEPVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQLPS 879
            ++ D L K R EID +DDAA DL L+R EIV +IA+ KAA  P+ PVFAMRPGREA ILRRLMARH+G  P AAIGRMWRELISA+S MQGPFE AI+GS D  GF DVAR HFGS IPA LY +   VLQ+VAEGKGVVGVLP+PG GD G +WW +LAH Q      +  KS+R+VARLPFLR PGQ   +A+ VAP+DREETG+D T+LLAFC+NEMSRAAVRRLL+SCGI C P+D   EDKRLMLF+AP YI+  D RL ++VAS EKLLER+++AGGYA P++L +
Sbjct:    5 ENTDFLGKLREEIDALDDAAHDLFLKRAEIVARIAEVKAAGQPEAPVFAMRPGREAMILRRLMARHAGGFPFAAIGRMWRELISASSSMQGPFEAAIYGSGDPAGFIDVARWHFGS-IPATLYNSATQVLQKVAEGKGVVGVLPLPGGGDPGGDWWPSLAHGQMTENGGEGGKSIRIVARLPFLRLPGQKISDAVVVAPVDREETGDDTTFLLAFCRNEMSRAAVRRLLDSCGIPCRPLDISQEDKRLMLFDAPGYISSNDIRLARSVASEEKLLERLVIAGGYANPIELSA 295          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: A0A352KDT2_9PROT (Chorismate mutase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KDT2_9PROT)

HSP 1 Score: 277 bits (708), Expect = 1.700e-89
Identity = 149/290 (51.38%), Postives = 191/290 (65.86%), Query Frame = 1
Query:   13 DTLAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDE-PVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTGREALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIECEPVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQLPS 879
            D LA  RA+IDQIDDA  DL + R +IV++IA  KA       PVFAMRPGREA+ILRRL  RHSG LP   IGR+WRELI+A   MQGPF+VAI+G+ D VG+WDVAR+HFGS  P  +  T  LVLQ+VA   GVVGVLP PG GD+G++WW  LAH     G+A +    ++VARLPF R   +  R+A+AVA +DREETG DRTYL+      +SR +  + +E+ GI  + VD   + + ++L +A  YI+ +DPRL  A  +    +  I V GGYAVP  LP 
Sbjct:    6 DPLAPLRAKIDQIDDALHDLFMERADIVREIADVKARQTGTAGPVFAMRPGREASILRRLAERHSGALPRQVIGRIWRELIAAKCRMQGPFQVAIYGASDIVGYWDVARSHFGSDTPTVMCDTVRLVLQKVANETGVVGVLPTPGCGDSGTDWWQGLAH-----GSAGDRAGPQIVARLPFFRSERKPERDAVAVAKVDREETGEDRTYLVLHGPANVSRTSCLKTIEAAGISAQLVDWQSDRESVLLLDAEGYISGDDPRLSAARQAAGGAIMHISVIGGYAVPYHLPG 290          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: A0A2S2CWQ6_9PROT (Chorismate mutase n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CWQ6_9PROT)

HSP 1 Score: 211 bits (538), Expect = 7.850e-64
Identity = 123/290 (42.41%), Postives = 167/290 (57.59%), Query Frame = 1
Query:   19 LAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFL-RGPGQ-TGREALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIE----CEPVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQ 870
            L   R EIDQIDDA  DL++RR  +V++I  AK A     P   +RP REA ILRRLMARH+G+ PA AI RMWRE+I+A + +QGPF VA++  +D  GFWDVAR HFGS +P     TPA  L+ V+EG   VG++P P   D+   WW  L  A          +  ++VARLPF  RG G+   R+ALA+A +  E TG+DRT L      ++SR  ++ +LE+CG+     C           + L E   ++   DPR+      + ++  R+   GGYAVPLQ
Sbjct:    8 LDDLRREIDQIDDAIHDLLMRRAAVVERIGLAKGADGSGAPPVFLRPAREATILRRLMARHAGSFPAQAIVRMWREMITALTRLQGPFAVAVYAPEDRRGFWDVARDHFGSFVPMTAVNTPAAALRAVSEGTATVGIVPYPAEDDS-DPWWRFLVSADA--------RRPQIVARLPFGGRGNGRGEDRDALAIAMVPHEPTGDDRTLLSIEILGDLSRGRLKDMLEACGLPPVSFCTWHSKDAAGPSIHLVEIADFVDPADPRMTALRERSGEIPVRVNTVGGYAVPLQ 288          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: A0A3S0X905_9PROT (Chorismate mutase n=5 Tax=Azospirillum TaxID=191 RepID=A0A3S0X905_9PROT)

HSP 1 Score: 210 bits (535), Expect = 2.430e-63
Identity = 128/297 (43.10%), Postives = 172/297 (57.91%), Query Frame = 1
Query:   19 LAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTG--REALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIE----C------EPVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQL 873
            L   R EIDQIDDA  DL++RR  +V++I  AK   +P + V+ +RPGREA+ILRRLMARH+G+ PA A+ R+WRE+ISA + MQGPF +A++  +D  GFWDVAR H+GS++P +   TPA  L+ V++G   VGV+P P   D    WW  L  A         N+  RVVARLPF       G  R+ALA+A    E TG+DRT L       +SR  ++ +LE+CG+     C         D GG    + L E   ++   DPRL   V  +  +  R+   GGYAVPL L
Sbjct:    8 LDDLRREIDQIDDALHDLLMRRAALVERIGAAK--GSPGQAVY-LRPGREASILRRLMARHTGSFPAQAVVRIWREMISAFTRMQGPFAIAVYAPEDKRGFWDVARDHYGSSVPMSAVNTPAAALRAVSDGTATVGVVPYPAEDDK-DPWWRFLVSADA-------NRP-RVVARLPFGGRGNARGENRDALAIAVAAHEPTGDDRTLLSIEIGGALSRGRLKDMLEACGLPPVNFCTWHAGGHATDHGGGGPSIHLVEIADFVDPADPRLTTLVERSGDIPVRVNTVGGYAVPLNL 292          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: UPI0015D514B0 (chorismate mutase n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D514B0)

HSP 1 Score: 209 bits (531), Expect = 9.120e-63
Identity = 121/299 (40.47%), Postives = 167/299 (55.85%), Query Frame = 1
Query:    1 MDSPDTLAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTG--REALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIE----CEPVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQLPS 879
            M S  +L + R EIDQIDDA  DL++RR  IV+++   K      E    +RP REA ILRRLMARH+G+ P   + RMWRE+ISA + +QGPF +A+F  +D  G+WD+AR HFGS +P     +PA  L+ VAEG   VG++P P   D    WW  L +A G        ++ RVVARLPF       G  R+ALA+ PI  E TG+DRT L      ++SR  ++  LE+  +     C       +   + L E   ++A +DPR+   +A    +  R++  GGYAVPL  P 
Sbjct:    1 MSSTPSLDELRREIDQIDDAIHDLLMRRTRIVEQVGHVKGI----EGGINLRPAREAVILRRLMARHAGSFPPQVMVRMWREMISALTRLQGPFAIAVFAPEDRRGYWDIARDHFGSAVPMTAVNSPAAALRAVAEGNATVGIVPYPAEDDA-DPWWRFLVNADG--------RTPRVVARLPFCGRGNARGEDRDALAIGPIPHEPTGDDRTLLGIELGADLSRGRLKDALEANRLPPTSFCTWHSRDPQGPSVHLVEIADFVAPDDPRVAALIARLSDMPVRVITLGGYAVPLSFPQ 286          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: A0A431VJT8_9PROT (Chorismate mutase n=1 Tax=Azospirillum griseum TaxID=2496639 RepID=A0A431VJT8_9PROT)

HSP 1 Score: 206 bits (525), Expect = 7.070e-62
Identity = 125/295 (42.37%), Postives = 170/295 (57.63%), Query Frame = 1
Query:   19 LAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTG--REALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIE----CE---PVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQLP 876
            L   R +IDQIDDA  DL++RR  +V++I  AK    P + V+ +RPGREA ILRRLMARHSG+ PA  + R+WRE+I+A + +QGPF VA++  +D  GFWDVAR H+GS +P     TPA  L+ V++G   VGV+P P   D+   WW  L  A         N+  RVVARLPF       G  R+ALA+A    E TG+DRT L      ++SR  ++ +L++CG+     C    P         + L E   ++   DPRL   V  + ++  R+ V GGYAVPL LP
Sbjct:    8 LDDLRRDIDQIDDAIHDLLMRRAAVVERIGAAK--GTPGQAVY-LRPGREAMILRRLMARHSGSFPAKVVVRIWREMITALTRLQGPFAVAVYAPEDKRGFWDVARDHYGSVVPMTAVNTPAAALRAVSDGTATVGVVPYPAEDDS-DPWWRFLVSADA-------NRP-RVVARLPFGGRGNARGENRDALAIAIASHEPTGDDRTLLSIEIGGDLSRGRLKDMLDACGLPPVSFCTWYAPGVGSMSGPSIHLVEIADFVDHADPRLTTLVERSGEIPVRVSVVGGYAVPLNLP 290          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: UPI0004074D51 (chorismate mutase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004074D51)

HSP 1 Score: 205 bits (521), Expect = 2.900e-61
Identity = 128/299 (42.81%), Postives = 171/299 (57.19%), Query Frame = 1
Query:    7 SPDTLAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTG--REALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIE----C--EPVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQLPS 879
            S DTL + R EIDQIDD+  DL++RR  +V+++  AK     D+    +RPGREA ILRRL ARH+G+ P   + RMWRE+I+A + +QGPF VA++  +D  GFWDVAR HFGS +P     TP   ++ V EG   VGV+P P   D+   WW  LA+     G+A+     RVVARLPF       G  R+AL +A +  E TG+DRT L      ++SR  ++  LE+CG+     C     DTG     L L E   YI  +DPR +  V     +  RI   GGYAVPLQ+ +
Sbjct:    4 SNDTLEELRREIDQIDDSIHDLLMRRALVVERVGVAK---GRDQTY--LRPGREAVILRRLAARHTGSFPLPVLVRMWREMITALTRLQGPFAVAVYAPEDRRGFWDVARDHFGSAVPMTAVNTPVAAVRAVGEGTATVGVVPYPAEDDS-DPWWRFLAN-----GDARTP---RVVARLPFGGRGNARGEDRDALVIAHVPHEPTGDDRTLLSIELGQDLSRGRLKDALEACGLPPTGFCTWHARDTGNPS--LHLVEIADYIDQQDPRPRAVVDRLADMPVRINTLGGYAVPLQITA 286          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: D3NZU3_AZOS1 (Chorismate mutase n=20 Tax=Azospirillum TaxID=191 RepID=D3NZU3_AZOS1)

HSP 1 Score: 202 bits (515), Expect = 2.840e-60
Identity = 125/300 (41.67%), Postives = 164/300 (54.67%), Query Frame = 1
Query:   19 LAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAK---AAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTG--REALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIE----C------EPVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQL 873
            L   R EIDQIDDA  DL++RR  +V++I  AK   AA     P+F +RP REA ILRRLMARH+G  PA  + R+WRE+I+A + MQGPF VA++  ++  GFWDVAR HFG  +P     TPA  L+ V+EG   V V+P P   D    WW  L  A             +VVARLPF       G  R+ALA+A +  E TG+DRT L      ++SR  ++  LE+CG+     C        +   G    + L E   ++A  DPRL +    T  +  R+ V GGYAVPL L
Sbjct:    8 LDDLRREIDQIDDAIHDLLMRRAAVVERIGAAKGNGAAEAGAAPIF-LRPAREATILRRLMARHAGTFPAQVVVRIWREMITAFTRMQGPFAVAVYAPEERRGFWDVARDHFGGFVPMTAVNTPAAALRAVSEGTATVAVVPYPAEDDA-DPWWRFLVSADAG--------RPQVVARLPFGGRGNARGENRDALAIAAVPHEPTGDDRTLLSIEIGGDLSRGRLKDSLEACGLPPVSFCTWHPAGHAIGMSGGGPSVHLVEVADFVAHADPRLARLTERTGDIPVRVTVVGGYAVPLAL 297          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: A0A2D6SZX8_9PROT (Chorismate mutase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6SZX8_9PROT)

HSP 1 Score: 199 bits (507), Expect = 3.470e-59
Identity = 115/288 (39.93%), Postives = 169/288 (58.68%), Query Frame = 1
Query:   19 LAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTGRE--ALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIECEPVDTGGEDK----RLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVP 864
            L   R  ID IDDA  DL++ R E+  +I  AK     D+ V AMRPGREA +LRRL+ RHSG LPA  +  +WREL+SA   +QGP EVA+   + +VG+WD+AR HFG+     L+++P +VL+ V EG+G+V VLP+P   D  + WW  LA        A    + R++A+LPF+        +  AL VAP+DR++TG D++ L+   +  +SRA +   L S G+E   +     D+     L L E   ++A ++ R+   + S+E  ++RI+  GGYAVP
Sbjct:    8 LDDLRRRIDAIDDAVHDLLIERSELAAEILAAKPPT--DDQVSAMRPGREAEVLRRLLGRHSGVLPAIVVADLWRELMSAFVRLQGPLEVAVCAPEKSVGYWDLARAHFGTATAMTLHRSPGVVLRAVTEGEGIVAVLPLPQEDDP-APWWQQLA--------ADVPNAPRIIAKLPFVENRASRFEDLGALVVAPLDRQQTGQDKSLLVLATETPISRAKLVEQLASAGLEGGALAVTDRDRDQPEALYLIEIDDFVAKDNARIADFLESSEGSIDRIVSLGGYAVP 284          
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Match: B6IYP9_RHOCS (Chorismate mutase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IYP9_RHOCS)

HSP 1 Score: 199 bits (506), Expect = 4.360e-59
Identity = 120/289 (41.52%), Postives = 160/289 (55.36%), Query Frame = 1
Query:   16 TLAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFAMRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFGSDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSGDTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTGREALAVAPIDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGI---ECEPVDTGGEDKRLMLFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQL 873
            TL + R+EID+ID A  DL++RR  +V++I   K    P     A+RP REA ILR LM RH G  P AA+ RMWRE+ISA + +QGPF VA++  DD  GFWD+AR H+GS  P     +   VL+ VAEG   VGVLP P   D    WW  L  A          KS R++ARLPFL   G+   EA+A+A +  EETG+DRT L    + +MSR  ++  LE+ G+   +       G    + L E   ++  +DPRL        + L R+L  G YA P+ L
Sbjct:    7 TLNELRSEIDEIDAALHDLVMRRTALVEQIGAVKPPGRP-----ALRPAREAEILRNLMDRHQGAFPPAALSRMWREMISALTRLQGPFAVAVYAPDDQRGFWDLARDHYGSATPMQAANSSLAVLRLVAEGSATVGVLPWPEDDDP-DPWWRYLFTADA--------KSPRIIARLPFLARAGREEVEAMAIAALPLEETGDDRTLLGIELREDMSRGRLKDSLEAAGLPPLQLRTFHLPGGAGSVHLTEVEAFVGPDDPRLAALYQRLGEALVRLLPIGTYATPIGL 281          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TX45_9PROT3.010e-13066.10Chorismate mutase n=1 Tax=Alphaproteobacteria bact... [more]
A0A352KDT2_9PROT1.700e-8951.38Chorismate mutase n=6 Tax=Alphaproteobacteria bact... [more]
A0A2S2CWQ6_9PROT7.850e-6442.41Chorismate mutase n=1 Tax=Azospirillum thermophilu... [more]
A0A3S0X905_9PROT2.430e-6343.10Chorismate mutase n=5 Tax=Azospirillum TaxID=191 R... [more]
UPI0015D514B09.120e-6340.47chorismate mutase n=1 Tax=Azospirillum oleiclastic... [more]
A0A431VJT8_9PROT7.070e-6242.37Chorismate mutase n=1 Tax=Azospirillum griseum Tax... [more]
UPI0004074D512.900e-6142.81chorismate mutase n=1 Tax=Azospirillum halopraefer... [more]
D3NZU3_AZOS12.840e-6041.67Chorismate mutase n=20 Tax=Azospirillum TaxID=191 ... [more]
A0A2D6SZX8_9PROT3.470e-5939.93Chorismate mutase n=1 Tax=Rhodospirillaceae bacter... [more]
B6IYP9_RHOCS4.360e-5941.52Chorismate mutase n=1 Tax=Rhodospirillum centenum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9contigP-wetherbeei_contig9:3670..4551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121033.AUCF01000001_gene2200
PFAMsCM_2
Model size882
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.76e-62
EggNOG OGsCOG1605@1|root,COG1605@2|Bacteria,1MWTP@1224|Proteobacteria,2TV3Z@28211|Alphaproteobacteria,2JRWA@204441|Rhodospirillales
Descriptionchorismate mutase
Cds size882
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187070.0637233-CDS-P-wetherbeei_contig9:3669..45511683187070.0637233-CDS-P-wetherbeei_contig9:3669..4551Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9 3670..4551 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9.5.1prot_P-wetherbeei_contig9.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9 3670..4551 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9.5.1

>prot_P-wetherbeei_contig9.5.1 ID=prot_P-wetherbeei_contig9.5.1|Name=mRNA_P-wetherbeei_contig9.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=294bp
MDSPDTLAKFRAEIDQIDDAAQDLILRRMEIVQKIAQAKAAANPDEPVFA
MRPGREAAILRRLMARHSGNLPAAAIGRMWRELISAASGMQGPFEVAIFG
SDDTVGFWDVARTHFGSTIPAALYKTPALVLQRVAEGKGVVGVLPVPGSG
DTGSNWWTALAHAQGAGGNAKNNKSLRVVARLPFLRGPGQTGREALAVAP
IDREETGNDRTYLLAFCKNEMSRAAVRRLLESCGIECEPVDTGGEDKRLM
LFEAPYYIADEDPRLKQAVASTEKLLERILVAGGYAVPLQLPS*
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mRNA from alignment at P-wetherbeei_contig9:3670..4551+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9.5.1 ID=mRNA_P-wetherbeei_contig9.5.1|Name=mRNA_P-wetherbeei_contig9.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig9:3670..4551+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACAGCCCCGATACTCTTGCCAAATTTCGCGCCGAGATCGATCAGAT CGATGATGCGGCGCAGGATCTGATTCTGCGGCGTATGGAAATTGTGCAGA AAATTGCACAGGCCAAAGCCGCCGCGAATCCTGATGAGCCTGTGTTCGCC ATGCGGCCAGGGCGTGAAGCCGCCATTCTGCGCCGCCTGATGGCGCGGCA TTCTGGAAATTTGCCCGCCGCCGCCATTGGGCGCATGTGGCGGGAATTAA TATCGGCGGCCAGCGGTATGCAGGGCCCCTTTGAAGTGGCGATTTTTGGA TCCGACGACACGGTCGGTTTCTGGGATGTGGCGCGCACGCATTTTGGCTC TACCATTCCAGCGGCGCTGTACAAAACCCCGGCCCTGGTATTGCAGCGGG TGGCGGAAGGCAAAGGCGTGGTCGGCGTATTGCCGGTGCCAGGCAGCGGC GATACCGGCAGTAACTGGTGGACCGCGCTGGCGCATGCGCAGGGCGCCGG AGGAAATGCGAAAAACAATAAAAGCCTGCGGGTGGTGGCGCGCCTGCCTT TCCTGCGCGGACCCGGCCAGACGGGGCGCGAGGCGCTGGCTGTTGCGCCG ATCGACCGCGAAGAAACCGGCAATGACCGCACCTATCTGCTGGCCTTTTG CAAAAATGAAATGAGCCGCGCCGCGGTGCGCCGGCTGCTGGAAAGTTGCG GCATTGAATGCGAGCCAGTGGATACAGGCGGCGAAGACAAGCGCCTGATG CTGTTCGAGGCGCCTTATTATATTGCTGATGAAGATCCCCGGCTGAAGCA GGCCGTTGCCTCAACAGAAAAATTGCTCGAGCGTATTCTGGTGGCGGGCG GCTATGCCGTGCCGCTGCAACTGCCATCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9:3670..4551+

>mRNA_P-wetherbeei_contig9.5.1 ID=mRNA_P-wetherbeei_contig9.5.1|Name=mRNA_P-wetherbeei_contig9.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig9:3670..4551+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACAGCCCCGATACTCTTGCCAAATTTCGCGCCGAGATCGATCAGAT
CGATGATGCGGCGCAGGATCTGATTCTGCGGCGTATGGAAATTGTGCAGA
AAATTGCACAGGCCAAAGCCGCCGCGAATCCTGATGAGCCTGTGTTCGCC
ATGCGGCCAGGGCGTGAAGCCGCCATTCTGCGCCGCCTGATGGCGCGGCA
TTCTGGAAATTTGCCCGCCGCCGCCATTGGGCGCATGTGGCGGGAATTAA
TATCGGCGGCCAGCGGTATGCAGGGCCCCTTTGAAGTGGCGATTTTTGGA
TCCGACGACACGGTCGGTTTCTGGGATGTGGCGCGCACGCATTTTGGCTC
TACCATTCCAGCGGCGCTGTACAAAACCCCGGCCCTGGTATTGCAGCGGG
TGGCGGAAGGCAAAGGCGTGGTCGGCGTATTGCCGGTGCCAGGCAGCGGC
GATACCGGCAGTAACTGGTGGACCGCGCTGGCGCATGCGCAGGGCGCCGG
AGGAAATGCGAAAAACAATAAAAGCCTGCGGGTGGTGGCGCGCCTGCCTT
TCCTGCGCGGACCCGGCCAGACGGGGCGCGAGGCGCTGGCTGTTGCGCCG
ATCGACCGCGAAGAAACCGGCAATGACCGCACCTATCTGCTGGCCTTTTG
CAAAAATGAAATGAGCCGCGCCGCGGTGCGCCGGCTGCTGGAAAGTTGCG
GCATTGAATGCGAGCCAGTGGATACAGGCGGCGAAGACAAGCGCCTGATG
CTGTTCGAGGCGCCTTATTATATTGCTGATGAAGATCCCCGGCTGAAGCA
GGCCGTTGCCTCAACAGAAAAATTGCTCGAGCGTATTCTGGTGGCGGGCG
GCTATGCCGTGCCGCTGCAACTGCCATCCTGA
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