mRNA_P-wetherbeei_contig8848.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8848.1.4
Unique NamemRNA_P-wetherbeei_contig8848.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 4.080e-72
Identity = 144/377 (38.20%), Postives = 214/377 (56.76%), Query Frame = 1
Query:   52 LRQIPWDKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCALGFDFYDKLLALTLMPLALGALFGASHL----------------------LAQWRASGDAVRQ-----------RRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNLGG-GKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMRRSESTAAVSRVGXXXXXXXXXXXXXXXKPQERLRDPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFLV 1080
            +R +P+ KL+ P V LQIM QY SIT I F PM ++F S I+++ L+LGW+ ++ C +  +FY  LLA T+ PL    +   ++L                      ++ +R S +   +           RR   ++ +  L ++FF+YS+VS+  FQTF+CD L    KS+LRADY+I CD+  H+++++YAGFM L Y +GIP  +  +LW  R      +   +AA    G               +P +RL D ++A + FLWR YR   +Y+EV+EC RRLLLTG L FILP S GQ+AVAC+LAV+T+AV+A   P  D  D  AY L    IF  MF+GLV+  +++ +   S  VL++L++ LT+ LV
Sbjct:   44 IRTMPFHKLKIPFVVLQIMTQYASITSIEFAPMFQTFLSTISVINLDLGWVLTSLCIIDVNFYGNLLAATVGPLMALLVLAVTYLYTCKKHRLEPRPREADDQAIYPMSSFRTSPNTSSENDTAEPYQGVMRRVQDKYTTVALTMAFFLYSTVSTVIFQTFSCDELEDLDKSYLRADYAIDCDSDRHKAFKLYAGFMILVYPIGIPVAFAVMLWRKRSMINPPKDILSAARVLHGSNPSQHEDERYGRPSEPDQRLSDRRIAQTAFLWRAYRPAAYYYEVLECFRRLLLTGCLVFILPNSAGQAAVACVLAVLTVAVFAFVSPYSDPDDHRAYTLGALAIFLTMFMGLVVREDLADEETQSQLVLSVLLIFLTIGLV 420          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 6.790e-66
Identity = 139/350 (39.71%), Postives = 206/350 (58.86%), Query Frame = 1
Query:   58 QIPWDKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCALGF-DFYDKLLALTLMPLALGALFGASHLLAQWRA---SGDAVRQRRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNLG-GGKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMRRSESTAAVSRVGXXXXXXXXXXXXXXXKPQERLRDPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFLVAAVL 1092
            ++P DKL+  +V  QI+  + SITG+ +PP    F SWI ++  ++G IFSA CAL F  FY++LL  TL P+ LG +   ++ +A+  A   S   + +R    RH++A L+L+F V++S S+  F+TFACD+    G+SFLRADY ISC T  H  YEVYAG M   Y +GIP  Y F+LW +R     R   ST  +   G               + ++R ++P L  S FLW+ +   ++Y+EV+ECGRR+LLTG L FI P +  Q+A+AC+ A  +L  +    P  D  D + Y L C  IF   FL L+++A+ +G+  GS +VL  ++V + +FL+ AVL
Sbjct: 1188 RVPLDKLKILVVVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFSASCALPFLTFYERLLLTTLAPIGLGGVLVVTYWMAKRTAGIGSAGVLARRAAWSRHMAAGLLLTFLVFTSSSTIVFKTFACDDEAVEGESFLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNPRAYYSTG-LELDGEMSEGPRETEEELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGE--GSRSVLGGIMVAINIFLILAVL 1534          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: A0A835YUM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM0_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.800e-65
Identity = 137/379 (36.15%), Postives = 194/379 (51.19%), Query Frame = 1
Query:   70 DKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCALGFDFYDKLLALTLMPLALGALFGASHL-----------------------------------LAQWRASGDAVRQRRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNLGG-GKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMRRSESTAAVSRVGXXXXXXXXXXXXXXXKPQERLRDPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFLVAAVLLQ 1098
              LR P+V +Q++ Q+ S+TG  FP +   F  W+ L +L+L    SA C +  DFYD+LL +T+ PL   A  GA HL                                   LAQWR++    R      RH + +L  +F ++S  S+  FQTFACD L G G+ +LRADY++SC T  HR+Y +YA FM L Y VGIP  Y ++L  HR+G          A S                            L  ++FLW PY+  +++WE++EC RRLLL+G L FI PG+P QSAVAC LA++T+ VY    P +D  D   YVL    IF  MF  L+++ +     + S  V+++L++ L+V L+AA  LQ
Sbjct:  893 SHLRIPIVVVQVLTQFASVTGAPFPQLYRGFLRWLNLFSLDLSLFLSAGCYVRTDFYDRLLFVTIAPLVCVAALGAFHLFVCRRHQRRTGGLDGXXXXXXXXXXXXXXTSSSRSLAQWRSARARERLDDIVSRHATLLLAFTFLIFSFASTTVFQTFACDCLDGTGECYLRADYALSCGTARHRAYVIYASFMVLVYPVGIPALYAYMLRRHRKGIARHEDGGVVAAS----------------------------LKPTKFLWTPYKKTVYFWELIECARRLLLSGFLVFIFPGTPAQSAVACTLALITIVVYGELAPHKDSTDHRVYVLGSIIIFFSMFSALLVQGDYVAQDDRSAQVISVLLIALSVLLLAACALQ 1243          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 9.220e-64
Identity = 136/354 (38.42%), Postives = 205/354 (57.91%), Query Frame = 1
Query:   61 IPWDKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCAL-GFDFYDKLLALTLMPLALGALFGASHLLAQWRA---SGDAVRQRRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNLG-GGKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMR-RSESTAAVSRVGXXXXXXXXXXXXXXXKPQERLR----DPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFLVAAVL 1092
            +P DKL+  +V  QI+  + SITG++FPP    F SW+ ++ L++G +F+A C L    FY +LL  TL P+ LG +   +H +A+ RA   S   + +R    RH++A L+L+F V++S S+  F+TF CD+    G+S+LRADYS+SC T  H  + +YAG M L Y +GIP  Y F+LW +R     R RSE+T   +  G                 +ERL     +P L  S FLW+ +   ++Y+EV+ECGRR+LLTGVL F   G+  Q+A+AC+ A V+L  +    P  D  D + Y L C  IF   FL L+++ + +G+ N +   L  +++ + VFL+ AVL
Sbjct: 1134 LPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKQRAGIGSASVLARRAAWSRHMAAGLLLTFLVFTSTSTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNPRVRSEATPQPT--GGVEMDVALVPANYGDDLEERLEQRRNNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAA--LGGILIAVNVFLILAVL 1483          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 1.950e-63
Identity = 136/354 (38.42%), Postives = 206/354 (58.19%), Query Frame = 1
Query:   61 IPWDKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCAL-GFDFYDKLLALTLMPLALGALFGASHLLAQWRA---SGDAVRQRRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNLG-GGKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMR-RSES----TAAVSRVGXXXXXXXXXXXXXXXKPQERLRDPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFLVAAVL 1092
            +P DKL+  +V  QI+  + SITG++FPP    F SWI ++ L++G +F+A C L    FY +LL  TL P+ LG +   +H +A+ RA   S   + ++    RH++A L+L+F V++S S+  F+TF CD+    G+S+LRADYS+SC T  H  Y +YAG M + Y +GIP  Y F+LW +R     R RSE+    T AV +                 +  +R R+P L  S FLW+ +   ++Y+EV+ECGRR+LLTGVL F   G+  Q+A+AC+ A V+L  +    P  D  D + Y L C  IF   FL L+++ + +G+ N +   L  +++ + VFL+ AVL
Sbjct:  792 LPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHVFTASCLLPSVSFYQRLLLTTLTPIGLGCVLVLTHWMAKERAGIGSASVLARKAAWSRHMAAGLLLTFLVFTSASTMAFKTFPCDDEAVEGESYLRADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNPRVRSEAIPQPTGAVEKK--VSLVPANYGDGLQERLDQRRRNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAAGEGNRAA--LGGILIAVNVFLILAVL 1141          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: A0A835YTX2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.550e-62
Identity = 128/326 (39.26%), Postives = 175/326 (53.68%), Query Frame = 1
Query:   70 DKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCALGFDFYDKLLALTLMPLALGALFGASHL---LAQWRASGD-AVRQRRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNLGGGKSFLRADYSISCDTL--THRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMRRSESTAAVSRVGXXXXXXXXXXXXXXXKPQERLRDPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAE-VSGDTN 1026
             + R P+V LQ++ QYISITG+  P     F   +  ++L++ W+ S  CA   DFY +LL  TL PL + AL  +      LA  R+ G  A + R    R ++A LV +F ++S VS   F+TF CD L  GKS+LRADYS+ CD    TH  Y +YA FM + Y VGIP  Y  +LW       +R+ + T   SR+                           ATS FLWRPY+   +YWE  EC RRL+L G+L FI+PGSPGQSAVAC+ A  T  VY    P ++R+D + Y L    +   MF  L+M+ + V G++ 
Sbjct:    2 QRFRIPIVVLQVLTQYISITGLALPLQYLRFLRAVDFMSLDMRWLTSPGCAADVDFYGRLLVTTLAPLVITALIFSPRFYLWLASRRSHGTVAPKLREVVSRDVNAFLVSTFLIFSGVSLTVFETFGCDELNTGKSYLRADYSLRCDDEEGTHAKYSIYAAFMIVVYPVGIPALYASILWRS----AVRQRDRTQLPSRLAS-------------------------ATS-FLWRPYKGRAYYWETAECVRRLMLAGLLVFIMPGSPGQSAVACMFAFFTAMVYEQVRPHQERMDKWLYTLGYGIVVCSMFTSLLMQVQWVEGNSE 297          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.690e-61
Identity = 136/353 (38.53%), Postives = 196/353 (55.52%), Query Frame = 1
Query:   58 QIPWDKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCALG-FDFYDKLLALTLMPLALGALFGASHLLAQWRA---SGDAVRQRRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNLG-GGKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMRRSESTAAVSRV--GXXXXXXXXXXXXXXXKPQERLRDPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFLVAAVLL 1095
            ++P DKL+  +V  QI+  + SIT + FPP    F SWI +L+ +LG + SA C     DFY  LL  TL PL +  +   ++ +A+ RA   S  ++ +R    RH++A L+LSF V+ + S+  F+TFACD+    GKS+LRADYSI C T  H  Y+VYAG M + Y VGIP  Y F+LW +R     R         R                   K ++R R+P L  S FLW+ +   ++Y+EVVECGRR+LLTGVL FI P +  Q A AC+ A V+L  +    P  D +D + Y L C  IF   FL L+++ +     +G+  V   +++ + +FL+ AVLL
Sbjct: 1105 RLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPLGVAMVLVLTYWIAKRRAGAGSAGSLMRRAAWSRHMAAGLLLSFLVFIATSTMAFKTFACDDEAVEGKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKTGAVVNPRADGSTDRITYKANSEDLEEKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKVD--SGVDGNHDVFGAIMIGINMFLIMAVLL 1455          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 9.510e-60
Identity = 140/374 (37.43%), Postives = 209/374 (55.88%), Query Frame = 1
Query:   58 QIPWDKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCALG-FDFYDKLLALTLMPLALGALFGASHLLAQWRA---SGDAVRQRRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNLG-GGKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMR-RSEST-------------------AAVSRVGXXXXXXXXXXXXXXXKPQERLR----DPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFLVAAVL 1092
            ++P DKL+  +V  QI+  + SITG  FPP    F S I  + L++G IFS  C L    FY +LL  T+ P+ L  +   ++ +A+ RA   S   V ++    RH++A L+L+F V++S S+  F+TFACD+    G+S+LRADYS+SC+T TH  Y+VYAG M + Y +GIP  Y F+LW +R     R R ++T                   +  SR    XXX          + +ERL+    +P L  S FLW+ +   ++Y+EV+ECGRR+LLTG L FI P +  Q+A+AC+ A  +L  +    P  D  D + Y L C TIF   FL L+ + + +G++N S  +L  +++ + V LV AVL
Sbjct:  617 RLPMDKLKILVVVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPIGLAGVLLLTYTMAKSRAGIGSASVVARKAAWSRHMAAGLLLTFLVFTSTSTVVFKTFACDDEAVEGESYLRADYSLSCNTATHTWYKVYAGVMIVVYPIGIPLLYAFILWINRESLNPRPRPKATDDDVDETTVPAQDADASGWSVASRKAGGXXXGEYVSKETPEELEERLQKRRQNPDLVPSMFLWKDFDPDMYYYEVIECGRRILLTGALIFIAPHTAAQAAMACMFAFASLLGFELLRPHLDPADSWLYRLGCVTIFLSNFLALLTKVDAAGESNRS--ILGGILIAVNVLLVVAVL 988          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 9.530e-60
Identity = 136/394 (34.52%), Postives = 200/394 (50.76%), Query Frame = 1
Query:   52 LRQIPWDKLRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCALGFDFYDKLLALTLMPLALGALFGASHLLAQWRA---------SGDAVRQ---------------------------RRTG---------------RRHLSAVLVLSFFVYSSVSSACFQTFACDNLGG-GKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMRRSESTAAVSRVGXXXXXXXXXXXXXXXKPQERLRDPKLATSRFLWRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFL 1077
            ++++P  KL+ P+V  QI+ QY  IT + FPP       ++ +L L++GW+ SA C    +FY +L+  TL+P+ALG     + + A+ R           G ++R                             R+G               RRH+  ++  SF VYS+VS+  FQTFACD L   G +FLRADYS+ C T  H+ Y  YAG M L Y +GIP  Y +LL+ HR     +++                          P+ RL D K+A +  LW+ YR   +Y+EV+EC RRLLLTG L FILP S GQ+ VAC+L+V T+A++    P  D  D   Y+L    IF  MF+ LV + E++   + S TV++ L++VL++ L
Sbjct: 1209 VKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIALGLALCCTFMYAKSRTVRAGLPKANEGSSMRSVNTVVSXXXXXXXXXXXXXXPATVVAGSRSGHGIMMSEARQMSVVKRRHVGVLVTASFLVYSTVSTIVFQTFACDTLDELGTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGV--------------------SPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYILGAILIFLSMFVSLVPKIEIADGDDQSETVVSWLLIVLSLTL 1582          
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Match: A0A836CHG0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 9.770e-60
Identity = 135/348 (38.79%), Postives = 185/348 (53.16%), Query Frame = 1
Query:   76 LRAPLVALQIMIQYISITGIRFPPMLESFFSWIALLTLELGWIFSAPCALGFDFYDKLLALTLMPLALGALFGASHLLAQWRASGDAVRQRRTG---RRHLSAVLVLSFFVYSSVSSACFQTFACDNLGG-GKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHRRGFGMRRSESTAAVSRVGXXXXXXXXXXXXXXXKPQERLRDPKLATSRFLWRPYR---APLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAVYAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAMLVVVLTVFLVAAVLLQ 1098
            LR P+V  Q++ QY  I G+  P + E F  W+  + ++L  + S+ C    DFYD+LL +TL+PL + AL  A++   + RA     R +      +R    +L LSF V+SS S+  FQTFACD + G    +LRADYS+SC    H  ++VYA FM   Y +GIP  YL LL   R        E T +                    +  +   DP+L    FLW+PY    A  +YWEVVECGRRLLLTGVL FI PGS GQSA AC+ A V++AVY    P  +RLD Y Y L    +F   F+ L+ +   +G   G     A+L+++L + L  A +LQ
Sbjct:  488 LRIPIVVFQVLTQYFQIAGVPLPDLYEQFLVWLNFVNVDLSSLLSSGCLWNSDFYDRLLLVTLLPLGIAALLCAAYAACKRRAQASGQRGKLYSLFVKRAGLLLLTLSFLVFSSSSTIIFQTFACDRISGTNDEYLRADYSVSCTDPRHARFQVYAAFMIFVYPIGIPVAYLALLRRRRVAIRGVPDEDTGSF-----------------YSRADDSELDPQLRAVAFLWQPYARQAARYYYWEVVECGRRLLLTGVLVFIRPGSIGQSAYACVFAYVSIAVYLLCQPHLNRLDTYLYGLGATIVFITYFVTLMAQTGGAGAHPGDNDATALLLILLNIALGLAAVLQ 818          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8848.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU27_9PHAE4.080e-7238.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH0_ECTSI6.790e-6639.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUM0_9STRA2.800e-6536.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JS31_9PHAE9.220e-6438.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRH1_ECTSI1.950e-6338.42Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A835YTX2_9STRA1.550e-6239.26Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
D7FRH4_ECTSI1.690e-6138.53Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JCK8_9PHAE9.510e-6037.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRF9_ECTSI9.530e-6034.52Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A836CHG0_9STRA9.770e-6038.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8848contigP-wetherbeei_contig8848:15..2159 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LRF9
PFAMsBeta_helix,Chlam_PMP
Model size1119
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.56e-60
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Cds size1119
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187062.6439328-CDS-P-wetherbeei_contig8848:14..1291683187062.6439328-CDS-P-wetherbeei_contig8848:14..129Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8848 15..129 +
1683187062.6534557-CDS-P-wetherbeei_contig8848:362..7801683187062.6534557-CDS-P-wetherbeei_contig8848:362..780Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8848 363..780 +
1683187062.6622162-CDS-P-wetherbeei_contig8848:1125..12951683187062.6622162-CDS-P-wetherbeei_contig8848:1125..1295Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8848 1126..1295 +
1683187062.671044-CDS-P-wetherbeei_contig8848:1601..17601683187062.671044-CDS-P-wetherbeei_contig8848:1601..1760Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8848 1602..1760 +
1683187062.6795785-CDS-P-wetherbeei_contig8848:1902..21591683187062.6795785-CDS-P-wetherbeei_contig8848:1902..2159Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8848 1903..2159 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8848.1.4prot_P-wetherbeei_contig8848.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8848 15..2159 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8848.1.4

>prot_P-wetherbeei_contig8848.1.4 ID=prot_P-wetherbeei_contig8848.1.4|Name=mRNA_P-wetherbeei_contig8848.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=373bp
DAATGGAAGAAGATAAILRQIPWDKLRAPLVALQIMIQYISITGIRFPPM
LESFFSWIALLTLELGWIFSAPCALGFDFYDKLLALTLMPLALGALFGAS
HLLAQWRASGDAVRQRRTGRRHLSAVLVLSFFVYSSVSSACFQTFACDNL
GGGKSFLRADYSISCDTLTHRSYEVYAGFMALFYAVGIPCFYLFLLWSHR
RGFGMRRSESTAAVSRVGSTAAVSRVGSTTTVSKPQERLRDPKLATSRFL
WRPYRAPLFYWEVVECGRRLLLTGVLAFILPGSPGQSAVACLLAVVTLAV
YAAFWPLEDRLDGYAYVLSCFTIFAVMFLGLVMEAEVSGDTNGSGTVLAM
LVVVLTVFLVAAVLLQLVLAAVG
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mRNA from alignment at P-wetherbeei_contig8848:15..2159+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8848.1.4 ID=mRNA_P-wetherbeei_contig8848.1.4|Name=mRNA_P-wetherbeei_contig8848.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2145bp|location=Sequence derived from alignment at P-wetherbeei_contig8848:15..2159+ (Phaeothamnion wetherbeei SAG_119_79)
GACGCGGCGACAGGCGGCGCGGCTGGCGCGGCGGGGGCGACGGCGGCAAT ACTACGGCAGATTCCGTGGGACAAACTGCGCGCTCCCCTGGTGGCGCTGC AGATCATGATCCAGTGTGAGTTTGAGAGCTGTCTTTCTGTTTGCTTTGCG CTGCTGCCCGTTCAGGAGGTATGACGGCGGCGGTACTAGCTGGCGTAGGC TGGCTGGTGTGGATGGCGGATGCCGCTACCTTCTGCCTGCATTTTCGTTC AGATTAAGTCGTTAAGTCTTGCTTTCATGTCGTTTTTGACACCCTCCGCA TCCACACTTCCCTCGTCTGCCGCACCTCGATGCGTACGCACATAAAAGAT ATCAGCATCACCGGAATCCGCTTCCCGCCGATGCTCGAGTCTTTTTTCTC GTGGATCGCGCTCCTCACGCTGGAGCTGGGCTGGATCTTCTCGGCCCCGT GCGCCCTTGGCTTCGACTTTTACGACAAGCTGCTGGCGCTCACCCTCATG CCGCTCGCGCTCGGTGCCCTCTTTGGCGCCTCTCACCTGCTGGCGCAGTG GCGAGCCAGCGGCGACGCTGTGCGGCAGCGGCGGACCGGCCGGCGGCACC TGTCGGCGGTGCTGGTGCTGTCGTTCTTTGTTTATTCGTCCGTGTCGTCG GCGTGCTTTCAGACGTTTGCCTGCGACAATCTCGGCGGCGGGAAGTCGTT CCTGCGGGCGGACTACTCCATCTCGTGCGACACGTTGACGCACCGGTCGT ATGAAGTTTACGCCGGGTGAGGGACGTTTTGGGCTGGCGTTGTCTGGTTG TTCTGGGAGAGCGGTCGGTTTGTTAATCGACTGTTGCGTTAATATGACGG AAGGGGCGGGTTTCCTGTCGTTTCTTTCGGAAAGATCGGTTTGTTTATCG ACTGTTGCGTTAATATGACGGAAGGGGCGGGTTTCCTGTCGTTTCTTTCG GAAAGAGGACGGCGGGTGATGCTGCTGCTCCTAGGTCAGCGGATCTATCC TTTAGAAGAGGAAAACTGGAACAACGGCCAAGCCGTTGATATTGTCACCT CCTTGGGAATCTCACGTCGCCGCCATTGCTATGCCGTCCCCGGTCTCTTT CCGTCTGGCAGGTTTATGGCGCTCTTTTACGCCGTCGGCATCCCGTGCTT CTATCTCTTTTTGCTATGGAGCCACCGCCGCGGCTTTGGAATGCGCCGCA GCGAGAGCACCGCAGCCGTCTCGCGGGTCGGCAGCACCGCAGCCGTCTCG CGGGTCGGCAGCACCACAACAGTCAGCAAACGTCATGCCGACGACGTCAG CAACAGTGGCGGCTATGGTGATGGCAACGGCGCCAACAGCAACGGCGACA GCGGCGGCAGCTCGGCCGCGGGTCGCAGCGTCGCAGACAGCACCAGCGGC GGCTCGCGCAGCGGCGGCGGCCTCCCTGGCGGCCGCGCCGGCAGAGTCCT GAGTGGACGGGGTGTCGGCAGCGTTTTGGGCCGCCGCAGCGGCGGCGGCG GCGGCCGCGGCGGCAGCAGCAGGGTCCTCGGCGGCTCCGGTCTCGGCCGC CGCAACAGCATCGGCGGCGGGTTTTCGGACGTGTCAGCGCAGGAGCGGCT GCGGGATCCGAAACTGGCGACGAGCCGCTTCCTGTGGCGGCCGTACCGCG CGCCGCTCTTCTACTGGGAAGTAGTGGAGTGCGGCCGCCGCCTCCTCTTG ACCGGCGTCCTCGCCTTCATTTTACCTGGGAGTCCCGGACAATCAGGTGC ATTGCATTTCGTCTTGCGGCTTTCAAAATGGAGCGAAATTTGCACATGGC ATTCCGTCGAGCGAAGCCGGAGAGCCTATTTAACCGACTTTTGCGATGTT TCCTTGACTCGCCCGCCTTCCCGGACCCCGCCACGCAGCCGTCGCCTGCT TGCTCGCCGTCGTCACCCTGGCGGTATACGCGGCGTTCTGGCCCTTGGAG GACCGTCTCGACGGCTACGCGTACGTGCTGTCGTGCTTCACCATTTTCGC CGTCATGTTTCTCGGCCTGGTGATGGAGGCTGAAGTGTCGGGGGACACCA ACGGCAGCGGCACGGTGCTGGCGATGCTTGTCGTCGTTCTGACGGTCTTC CTGGTGGCGGCGGTGCTGCTGCAGCTGGTGCTGGCGGCTGTCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8848:15..2159+

>mRNA_P-wetherbeei_contig8848.1.4 ID=mRNA_P-wetherbeei_contig8848.1.4|Name=mRNA_P-wetherbeei_contig8848.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1119bp|location=Sequence derived from alignment at P-wetherbeei_contig8848:15..2159+ (Phaeothamnion wetherbeei SAG_119_79)
GACGCGGCGACAGGCGGCGCGGCTGGCGCGGCGGGGGCGACGGCGGCAAT
ACTACGGCAGATTCCGTGGGACAAACTGCGCGCTCCCCTGGTGGCGCTGC
AGATCATGATCCAGTATATCAGCATCACCGGAATCCGCTTCCCGCCGATG
CTCGAGTCTTTTTTCTCGTGGATCGCGCTCCTCACGCTGGAGCTGGGCTG
GATCTTCTCGGCCCCGTGCGCCCTTGGCTTCGACTTTTACGACAAGCTGC
TGGCGCTCACCCTCATGCCGCTCGCGCTCGGTGCCCTCTTTGGCGCCTCT
CACCTGCTGGCGCAGTGGCGAGCCAGCGGCGACGCTGTGCGGCAGCGGCG
GACCGGCCGGCGGCACCTGTCGGCGGTGCTGGTGCTGTCGTTCTTTGTTT
ATTCGTCCGTGTCGTCGGCGTGCTTTCAGACGTTTGCCTGCGACAATCTC
GGCGGCGGGAAGTCGTTCCTGCGGGCGGACTACTCCATCTCGTGCGACAC
GTTGACGCACCGGTCGTATGAAGTTTACGCCGGGTTTATGGCGCTCTTTT
ACGCCGTCGGCATCCCGTGCTTCTATCTCTTTTTGCTATGGAGCCACCGC
CGCGGCTTTGGAATGCGCCGCAGCGAGAGCACCGCAGCCGTCTCGCGGGT
CGGCAGCACCGCAGCCGTCTCGCGGGTCGGCAGCACCACAACAGTCAGCA
AACCGCAGGAGCGGCTGCGGGATCCGAAACTGGCGACGAGCCGCTTCCTG
TGGCGGCCGTACCGCGCGCCGCTCTTCTACTGGGAAGTAGTGGAGTGCGG
CCGCCGCCTCCTCTTGACCGGCGTCCTCGCCTTCATTTTACCTGGGAGTC
CCGGACAATCAGCCGTCGCCTGCTTGCTCGCCGTCGTCACCCTGGCGGTA
TACGCGGCGTTCTGGCCCTTGGAGGACCGTCTCGACGGCTACGCGTACGT
GCTGTCGTGCTTCACCATTTTCGCCGTCATGTTTCTCGGCCTGGTGATGG
AGGCTGAAGTGTCGGGGGACACCAACGGCAGCGGCACGGTGCTGGCGATG
CTTGTCGTCGTTCTGACGGTCTTCCTGGTGGCGGCGGTGCTGCTGCAGCT
GGTGCTGGCGGCTGTCGGC
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