mRNA_P-wetherbeei_contig8830.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8830.1.1
Unique NamemRNA_P-wetherbeei_contig8830.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: D7G2V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V0_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.650e-76
Identity = 116/227 (51.10%), Postives = 161/227 (70.93%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETPDHLCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPDDTIKRQLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQE----PSLRINSICPGY 669
            +  + GANKGIGLAIA+K+A  P HLC+LT+R P LG  A ++LK    +  + + YKQLDI D  ++ERFA E+E+E+GR DVLVNNAG+AFKGSDPTPF +QA PT   N++ T   TE++LPLV+KSD GR+V VAS +GHL+I+     +   + P LTKE+L+ + ++FV D +  + +  GWP +CYGMSK+ +IAY+K+ AR E     ++ IN+ CPGY
Sbjct:   33 ISVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKE---EGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSDAGRVVNVASMAGHLSILGSQDRRNAFTNPALTKERLSAMMAQFVGDVKAGRHQGGGWPNTCYGMSKLGVIAYTKVAARVEREAGSTVTINACCPGY 256          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: A0A836C9X3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X3_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.660e-74
Identity = 120/228 (52.63%), Postives = 159/228 (69.74%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETPDHLCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEY-GRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPDDTIKRQLSAPD----LTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQEPSLRINSICPGY 669
            V  + GANKGIGL IARK+      LC+LTAR+ + G +A E    SL      ++++QLDI+D  + ERFA + E+E+   +D LVNNAG AFKGSDPTPFAEQA PT ++N++ TV  TERLLPLVK+S  GRIV VAS SGHL IVPD  ++ + ++      L  ++L  L   FV+D +  + KE GWP SCYGMSK+C+IAY+KILA +EP+L++N+ CPGY
Sbjct:    5 VGIVTGANKGIGLEIARKLGREQGWLCVLTARDEERGRSAAE----SLLSEGAGVRFRQLDISDPDSRERFAKDAEQEFTAGIDALVNNAGFAFKGSDPTPFAEQAEPTMDINFFSTVATTERLLPLVKRSPHGRIVNVASMSGHLRIVPDAELRAKFASAGQPGGLGHDELMLLARGFVQDVKEGKHKEKGWPNSCYGMSKLCLIAYTKILAAREPTLKVNACCPGY 228          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: A0A7S2UVT3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVT3_9STRA)

HSP 1 Score: 212 bits (539), Expect = 5.610e-65
Identity = 109/225 (48.44%), Postives = 149/225 (66.22%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETPDHLCILTARNPDLGNAACEELK-ASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPDDTIKRQ--LSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQEPSLRINSICPG 666
            +  + G+NKGIG  +A K+A TP+ +CI+ AR+ + G  A +E+  A          +KQLDI D T+++RF  EM+ EYGR+DVLVNNA +AFKG+DPTPF  QAAPT   N++ TVQ+T+ LLPL+++S   RIV VAS SGHL I+  +   RQ   S+  LT+  L  L   F  D Q     +NGWP +CYGMSK+ +IA++KILAR+EP + +N  CPG
Sbjct:   29 IAVVTGSNKGIGKEVAIKLASTPNTICIVAARDMNRGQQAAQEVNIAGQTAGGGGAVFKQLDIADNTSVQRFMQEMQSEYGRLDVLVNNAAIAFKGADPTPFQYQAAPTLRTNFWATVQVTDALLPLLRQSPAARIVNVASMSGHLRILSHE---RQDIFSSSSLTRPVLYDLMRAFEADVQAGVHHQNGWPSTCYGMSKLGVIAFTKILAREEPGMVVNCCCPG 250          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: W7T5T2_9STRA (Carbonyl reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5T2_9STRA)

HSP 1 Score: 200 bits (508), Expect = 7.600e-60
Identity = 105/235 (44.68%), Postives = 153/235 (65.11%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETPDHLCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGR-IVFVASSSGHLNIVPDDTIKR-QLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQE----------PSLRINSICPGY 669
            +  + G+NKGIGL I +K+A T   + IL ARNP LG  A +EL+       + +KY+ LD++ A +IE F  E++++YGR D+LVNNAG+AFKG DPTPF +QAAPTF  N++GTV+L + + PL++KS     IV VAS SG L+I+  D  K+ ++S+P LT+++L  L  +F  D +     ENGWP +CYGMSK+ +IA+ ++ AR E           S+ + S CPG+
Sbjct:   56 ITIVTGSNKGIGLEILKKLAPTSS-VAILAARNPSLGEQAAQELR---DHGLENVKYRPLDVSSAESIEHFVKEIQKDYGRADILVNNAGIAFKGRDPTPFRDQAAPTFKTNFWGTVELIDAMTPLLRKSTGCPCIVNVASQSGRLSILDTDRGKQAEISSPILTRDRLFELVRQFEHDVRTGTHAENGWPNTCYGMSKLALIAFGRVFARNEMEGGTEKEGKTSIWLASCCPGW 286          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: A0A7S0XB88_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB88_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.700e-58
Identity = 97/223 (43.50%), Postives = 147/223 (65.92%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETPDHLCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPDDTIKRQLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQEPSLRINSICPGY 669
            +  + G+NKGIG  I +K++    +  IL ARN +LG+ A   L++   +  D +++++LDI+   +I+ F  +++ +YG+ DVLVNNA +AFKGSDPTPF  QA PT   NY+GT+ LT+ +LPL++ S   RIV VAS +G L I+P +  K+  ++  LT ++L    ++FV D +  + KEN WP SCYG SK+ +IA +K+LAR  P + IN+ CPGY
Sbjct:   22 IAVVTGSNKGIGYEIVKKLSSI-GYKTILAARNVNLGSQAANNLRS---QGLD-VEFRELDISSDESIKAFVNKLQSDYGKCDVLVNNAAIAFKGSDPTPFKLQAEPTIKTNYFGTLSLTKLMLPLLQNSTSPRIVNVASQAGALGILPSNERKKFFTSESLTVDELTEAMNQFVNDVKNDKLKENDWPGSCYGTSKLGVIALTKVLARNYPDILINACCPGY 239          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: A0A6U0U495_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0U495_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.960e-58
Identity = 102/235 (43.40%), Postives = 148/235 (62.98%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAET-------PDHLCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDG-----RIVFVASSSGHLNIVPDDTIKRQLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQEPSLRINSICPGY 669
            V  + GANKGIGL I  + A         P    +L AR+   G AA E+L+A+    A  +K+KQLDI+D  + +RF  +++EE+G+VD LVNNA +AFKGSDPTPF EQ  PT NVN+Y T    + +LPL++ + +      RIV VAS SGHL I+  + ++ Q +   LT+++L GL  +F  +      K++G+P S YGMSK+ +IAYS++LAR+ P + + S CPG+
Sbjct:    5 VIVVTGANKGIGLNIVTRFAHAAAEALAPPLPTVLLCARDAARGEAAVEQLRANGGDPASVVKFKQLDISDEESRKRFVADVQEEFGKVDCLVNNAAIAFKGSDPTPFEEQTEPTLNVNFYSTCAFIDEMLPLLQAAAEAEDAKPRIVNVASMSGHLRILKSNELRDQFARDSLTRDELFGLMDRFRTEVADHTYKKSGFPSSNYGMSKLGVIAYSRVLARENPDIDVFSCCPGW 239          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: A0A1Z5K650_FISSO (Carbonyl reductase 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K650_FISSO)

HSP 1 Score: 186 bits (473), Expect = 2.780e-55
Identity = 103/225 (45.78%), Postives = 137/225 (60.89%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETP--DHLCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPDDTIKRQLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQEPSLRINSICPGY 669
            V  + G+NKGIG  IA ++  +    H+C L  R+  L   A   LK  LP    ++    L + D T+    A  +EE YG++DVLVNNA +AFK +DPTPF EQ +PT NVN+ GT  LTE+LLPL++K  D RIV VAS SG L  V  +  + Q +A DLT EQL  L  +F  D    + +E GW  S YGMSK+ +IA +K+ AR+EPS+ +N  CPGY
Sbjct:   11 VAVVTGSNKGIGYFIALQLGLSGLFQHIC-LACRDLQLAQEAVASLKQQLPPEV-QVSSAPLLLGDTTSHHELAQTLEERYGKIDVLVNNAAMAFKQADPTPFLEQCSPTLNVNFRGTCDLTEQLLPLLRKGTDARIVNVASMSGRLGQVSPER-QAQFAADDLTMEQLHALVDEFERDVLAGRHREKGWSNSNYGMSKLAVIAATKVWARREPSINVNCCCPGY 232          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: F0XWM1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWM1_AURAN)

HSP 1 Score: 181 bits (459), Expect = 2.520e-53
Identity = 104/225 (46.22%), Postives = 139/225 (61.78%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETPDHLCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPDDTIKRQLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQEP--SLRINSICPGY 669
            V  + GANKGIG  +A+++  +   + IL  R+   G AA   L  S PK+    ++ QLDI D  +I  FA  +E++ GRVD LVN+A +AFK +DPTPFA Q  PT  +N  GTV LT+ LLPL+++SD GR+V VAS +G L  V     +R  S P LT E+L GL   F  D    + K  GW  S YG+SK C+IA+SKILAR+    +LR+N+ CPGY
Sbjct:    4 VAVVTGANKGIGFHVAQQLLASCT-VVILACRDASRGEAAVRRL--SDPKA----RFMQLDIGDEASIATFAAAVEQDVGRVDALVNDAAIAFKAADPTPFAAQTEPTLKINVRGTVALTDALLPLLERSDAGRLVHVASMTGKLREVSRKR-RRDFSDPALTTERLLGLADDFAADVAAGRHKAAGWGSSNYGLSKPCVIAHSKILARKYAGSALRVNACCPGY 220          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: A0A7S3QJ67_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ67_9STRA)

HSP 1 Score: 182 bits (461), Expect = 3.130e-53
Identity = 97/232 (41.81%), Postives = 142/232 (61.21%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETPDH-LCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPT--------PFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPDDTIKRQLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQEPSLRINSICPGY 669
            V  I G+NKGIG  IARKI +  D  +C+L  R+ +LG AA  EL   +      + +  +D++D + I + A  +EEEYG+ D+LVNNA + F  +DPT        PF +QA  T   N++GT+ LT+ LLPL++KS   RI+ +ASS+G L I+P    +   ++ +LT EQL G   +F+ + Q    +  GWP +CYG SKV IIA +KI+AR E ++ +NS+ PGY
Sbjct:   24 VALITGSNKGIGKEIARKIGKEDDQTICLLGCRDEELGRAAVREL---IDDGCPNVAFVHVDLSDISTIRQAAKTIEEEYGQCDILVNNAAVCF--NDPTLYGKVSHTPFVQQADLTVRTNFFGTLSLTQSLLPLLRKSSSPRIINIASSAGRLAILPSQQRRDDFTSENLTLEQLEGYMEEFIRNVQDGTHQNKGWPNTCYGASKVAIIAMTKIMARSESNIMVNSVDPGY 250          
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Match: A0A7S3L630_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L630_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.380e-52
Identity = 96/224 (42.86%), Postives = 137/224 (61.16%), Query Frame = 1
Query:    1 VRTIAGANKGIGLAIARKIAETP-DHLCILTARNPDLGNAACEELKASLPKSADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTPFAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPDDTIKRQLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCIIAYSKILARQEPSLRINSICPGY 669
            V  + GANKGIG  IA ++  +      +L  R+ + GN A   L+A LP +     Y  + + D  +   F  +MEE +G+VD LVNNA +AFKGSDPTPF +Q  PT +VN+  TV  TE++LPL+KK  D R+VFVAS SG L  +  + ++++ ++P LT  +L  L  KF +D Q      NGW  S YG+SK+ +IA +K++AR+ P + IN  CPGY
Sbjct:   10 VAVVTGANKGIGYFIALQLGLSGLFQQILLGCRDVNRGNEAVASLQAQLPSTVKVSSYPFI-LGDVESHSAFVKQMEENFGKVDCLVNNAAMAFKGSDPTPFKDQTKPTLDVNFRATVDFTEKMLPLLKKGSDPRLVFVASMSGRLGQLSAN-LQKEFASPSLTIPKLHSLVDKFEKDVQDGTHSANGWGNSNYGLSKLAVIAATKVMARENPEISINCCCPGY 231          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8830.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2V0_ECTSI1.650e-7651.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9X3_9STRA1.660e-7452.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UVT3_9STRA5.610e-6548.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7T5T2_9STRA7.600e-6044.68Carbonyl reductase n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S0XB88_9STRA1.700e-5843.50Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A6U0U495_9STRA4.960e-5843.40Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1Z5K650_FISSO2.780e-5545.78Carbonyl reductase 1 n=2 Tax=Fistulifera solaris T... [more]
F0XWM1_AURAN2.520e-5346.22Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3QJ67_9STRA3.130e-5341.81Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3L630_9STRA1.380e-5242.86Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8830contigP-wetherbeei_contig8830:785..2504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G2V0
PFAMsadh_short
Model size669
Max annot lvl2759|Eukaryota
KEGG rclassRC00154,RC00205,RC00823,RC01491
KEGG koko:K00079
KEGG ReactionR02581,R02975,R04285,R09420
KEGG Pathwayko00590,ko00790,ko00980,ko01100,ko05204,map00590,map00790,map00980,map01100,map05204
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.71e-77
EggNOG OGsCOG1028@1|root,KOG1208@2759|Eukaryota
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-07_005600.1
EC1.1.1.184,1.1.1.189,1.1.1.197
Descriptionoxidation-reduction process
Cds size669
COG categoryIQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187062.0275512-CDS-P-wetherbeei_contig8830:784..9911683187062.0275512-CDS-P-wetherbeei_contig8830:784..991Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8830 785..991 +
1683187062.048536-CDS-P-wetherbeei_contig8830:1459..16381683187062.048536-CDS-P-wetherbeei_contig8830:1459..1638Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8830 1460..1638 +
1683187062.0626714-CDS-P-wetherbeei_contig8830:1951..21501683187062.0626714-CDS-P-wetherbeei_contig8830:1951..2150Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8830 1952..2150 +
1683187062.071928-CDS-P-wetherbeei_contig8830:2420..25041683187062.071928-CDS-P-wetherbeei_contig8830:2420..2504Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8830 2421..2504 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8830.1.1prot_P-wetherbeei_contig8830.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8830 785..2504 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8830.1.1

>prot_P-wetherbeei_contig8830.1.1 ID=prot_P-wetherbeei_contig8830.1.1|Name=mRNA_P-wetherbeei_contig8830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp
VRTIAGANKGIGLAIARKIAETPDHLCILTARNPDLGNAACEELKASLPK
SADRIKYKQLDITDATAIERFAGEMEEEYGRVDVLVNNAGLAFKGSDPTP
FAEQAAPTFNVNYYGTVQLTERLLPLVKKSDDGRIVFVASSSGHLNIVPD
DTIKRQLSAPDLTKEQLAGLGSKFVEDTQRCQTKENGWPMSCYGMSKVCI
IAYSKILARQEPSLRINSICPGY
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mRNA from alignment at P-wetherbeei_contig8830:785..2504+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8830.1.1 ID=mRNA_P-wetherbeei_contig8830.1.1|Name=mRNA_P-wetherbeei_contig8830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1720bp|location=Sequence derived from alignment at P-wetherbeei_contig8830:785..2504+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCGAACAATTGCAGGGGCCAACAAGGGAATCGGTCTGGCAATCGCCCG CAAGATTGCGGAAACACCGGACCACCTGTGCATCTTGACGGCGCGAAACC CCGACCTGGGAAATGCGGCGTGCGAGGAGCTCAAGGCAAGCCTTCCAAAG AGCGCAGATCGAATCAAGTACAAACAACTCGACATCACAGATGCCACCGC CATCGAGGTCAGTGCTTTTCGTTATCAGTAGGAGCACATGTCTTTGTGCT GGAGACTCTAGCTTGCCCAGGCTTTTCGGAGACTTTTTGGTTGCTTCGGG CACGAGATCCGTTTCACGAAAGTTTAATCGCCTCTCACTTGCCGCGCCTT GTCTTTTTCCTGCAATGTTCTGTAGGAGCCTGTTCTTATTGTTGTTTTTG GTACGGAACTGTTCATATTGGGCCGGGCGTACACATAGGATAGGCACTGT GCTTTGTCTTAGGGACAGATGCGCGCTTGCATGATTGCCTCAGCCGGTGG TTCCGATCTTACACGAATCCGCTTTCGAAAAGCACTTCATCGCTGTGGGA CCCGCCCTCCATGCCCGATCCTCTTCCCTTTCCTCTCACTTTGCGGTCAT GTCGCTCCCTCTTCCCCTCCGCCTCCCCTGCTCTTCGAAACATTCTCTCC ATCTTTCGCGAACCCTCTCTCTCAGCGGTTCGCCGGCGAGATGGAGGAGG AGTACGGCCGCGTGGACGTGCTCGTCAACAACGCCGGCCTGGCCTTCAAG GGCTCCGACCCGACCCCCTTCGCCGAGCAGGCGGCGCCCACCTTCAACGT CAATTACTATGGGACGGTGCAGCTCACGGAGCGGCTGCTTCCGCTGGTCA AGAAGTGAGTCGAAAGAGGGAGAAAACGGTTTTGGAGCCGTCAGTTCAGT CTGTTCCTTTTCCGTTCTTCTCCGTCTAACGCCGATGCACTACGAAAGGA TACTTCTGTCGATAAGCTTCGGCGGCTGTCATTATGCTTCCTTTATTGCC GTGGCAATACGGGTTGCCAGTTATTCGCCGGCAGATGCTCGCGAACAGCC AGCCTAGATGTGGGACGAGAGCCGCGGAGGAATCGCTTCGCTGCGATTGA ACTGTTGGCTGTCGTTGCCGTCGCACTCCGTCCCTGCCCCGTCCCTGCCT ATTCCGCCTCTACTCAGGAGCGACGACGGCCGCATCGTTTTCGTGGCGTC CTCTTCCGGCCACCTCAACATTGTGCCCGACGACACAATCAAGCGGCAGC TCTCTGCCCCGGACCTGACCAAGGAGCAGCTAGCAGGGCTGGGGTCCAAG TTCGTCGAGGATACACAGCGCTGCCAGACGAAGGAGAACGGGTGGCCCAT GTCCTGCTACGGCATGGTGGGTTGAGGCTGGTTTTGTATTCTTGTTTCTG CGTTCAATTTGGTTTTGTTATGTTATTTGTTTTGATTGTCGTGGGGGGTT TCTTTTTCCTTGGCGCAGTCAGCTCCGGGGACTGCGGAGCTTTGCGGCGG AGAAGGAGGGAGAAAGGGGAAAGCAGTGATGGTGAAAGGCCGGCGGAACG GCTGCGGATACGTTTGCTATCCTGTTGATCTATGCATTTCCTAACCATGC ACGTGTACGCTGGCGACATTTTTTCGACCTTTGCAGAGCAAGGTGTGCAT CATTGCTTATAGCAAGATTCTCGCCCGCCAGGAGCCGTCCCTGCGTATAA ACAGCATTTGTCCTGGCTAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8830:785..2504+

>mRNA_P-wetherbeei_contig8830.1.1 ID=mRNA_P-wetherbeei_contig8830.1.1|Name=mRNA_P-wetherbeei_contig8830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig8830:785..2504+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCGAACAATTGCAGGGGCCAACAAGGGAATCGGTCTGGCAATCGCCCG
CAAGATTGCGGAAACACCGGACCACCTGTGCATCTTGACGGCGCGAAACC
CCGACCTGGGAAATGCGGCGTGCGAGGAGCTCAAGGCAAGCCTTCCAAAG
AGCGCAGATCGAATCAAGTACAAACAACTCGACATCACAGATGCCACCGC
CATCGAGCGGTTCGCCGGCGAGATGGAGGAGGAGTACGGCCGCGTGGACG
TGCTCGTCAACAACGCCGGCCTGGCCTTCAAGGGCTCCGACCCGACCCCC
TTCGCCGAGCAGGCGGCGCCCACCTTCAACGTCAATTACTATGGGACGGT
GCAGCTCACGGAGCGGCTGCTTCCGCTGGTCAAGAAGAGCGACGACGGCC
GCATCGTTTTCGTGGCGTCCTCTTCCGGCCACCTCAACATTGTGCCCGAC
GACACAATCAAGCGGCAGCTCTCTGCCCCGGACCTGACCAAGGAGCAGCT
AGCAGGGCTGGGGTCCAAGTTCGTCGAGGATACACAGCGCTGCCAGACGA
AGGAGAACGGGTGGCCCATGTCCTGCTACGGCATGAGCAAGGTGTGCATC
ATTGCTTATAGCAAGATTCTCGCCCGCCAGGAGCCGTCCCTGCGTATAAA
CAGCATTTGTCCTGGCTAT
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