mRNA_P-wetherbeei_contig88.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: A0A836CE40_9STRA (Matrin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA) HSP 1 Score: 331 bits (848), Expect = 2.140e-105 Identity = 180/300 (60.00%), Postives = 215/300 (71.67%), Query Frame = 1
Query: 1 AEELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAK---RKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEG---GSSNGAE----LAWQEAWVRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
AE+L+PLG++RLKEALEAL LKCGGTLQQRA+RL +V G P +ID KL AK +K G +T G G S+G + A EA VRA L LSDVW+ATR+QVEK+QT TVEER+AEI +EE G +PE G+ ++SDDDGPIYNP NLPLG+DGKPI +WLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQE RH+HGM+CLGIPNTKHFHDITLIQDA DLY K++ ++ + + EE+ED+EGNVL +RT++DLARQGLL
Sbjct: 251 AEDLMPLGLDRLKEALEALGLKCGGTLQQRAERLMAVKGKKPSEIDPKLLAKGAGQKRNGPPSDGPAAKRQNGNGADAADASGA-KTNGVPNGKSDGGDWRRSTAAAEARVRAFLEALSDVWEATRKQVEKKQTRTVEERDAEIADEEAGT---LPEVGDADE----EDSDDDGPIYNPLNLPLGWDGKPIPFWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEFRHAHGMRCLGIPNTKHFHDITLIQDAMDLYAKLKGKLEVEAWTPDVGEEFEDSEGNVLNKRTYEDLARQGLL 542
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: D7FUU5_ECTSI (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI) HSP 1 Score: 312 bits (799), Expect = 4.390e-98 Identity = 183/291 (62.89%), Postives = 219/291 (75.26%), Query Frame = 1
Query: 1 AEELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAK-RKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEGGSSNGAELAWQEAWVRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
A+EL LGM+RLKEAL+A+ LKCGGTL+QRADRL+SV G P++ID+KL+AK +K XXXXXX XXXX +LA E V+ALL V +D ++T+RQV+K+ T TVEER+ EI+EEE+G A+PE E XXXXX D++GPIYNP NLPLG+DGKPI YWLYKLHGLGVE+KCEICGDFSY GRR FDRHFQE RH+HGM+CLGIPNTKHFHDI LIQDA+DLY KI+ + D Q+N E EEYED EGNVL RRT++DLARQGL+
Sbjct: 257 ADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEXXXXXXXXAPGHGADPNANGPAXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKHTRTVEERDQEIQEEEQG---ALPEFNEXXXXXX----DEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 540
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: A0A7S3HNG2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNG2_9STRA) HSP 1 Score: 307 bits (787), Expect = 1.050e-96 Identity = 165/293 (56.31%), Postives = 200/293 (68.26%), Query Frame = 1
Query: 1 AEELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAKRKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEGGSSNGAE---LAWQEAWVRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
A EL LGM+RLKEALEAL LKCGGTLQ RA+RLWSV G P+ I L+AK R ++ G E +AW+E V+A+ ++S V +AT R EK+QT T EEREAE+REEE G+ A +P++ G ++ DDD P+YNP NLPLG+DGKPI YW+YKLHGLGVEYKC+ICGD SYWGRRAFD+HFQE +H+HGM+ LGIPNTKHFHDITLI DA+ LY KIR + QF E EEE+ED +GNVL RRT++DLARQGLL
Sbjct: 238 AGELEALGMDRLKEALEALGLKCGGTLQDRANRLWSVRGKKPEDIPANLKAK-----------------------DTGSNKKRKLEAAAKGDEPDSVAWKEYRVKAVCDLMSSVVNATVRHAEKQQTRTAEEREAELREEEFGL-AQLPQSAHGDGTKKGEDDDDDAPVYNPLNLPLGWDGKPIPYWMYKLHGLGVEYKCQICGDHSYWGRRAFDKHFQEWKHAHGMRSLGIPNTKHFHDITLIADAKALYEKIRTGIQVGQFQGEMEEEFEDTQGNVLNRRTYEDLARQGLL 506
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: A0A812TNG2_SYMMI (SF3A3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TNG2_SYMMI) HSP 1 Score: 300 bits (769), Expect = 2.120e-95 Identity = 159/289 (55.02%), Postives = 197/289 (68.17%), Query Frame = 1
Query: 4 EELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAKRKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEGGSSNGAELAWQEAWVRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
+EL LG++RLK A+EAL LKCGGTL RADRLWSV GV P+ I KL+AK K G G S + A E +++L ++++++ ATRR EK+QT T+EE+ A + EEE G V EA D+ DD+GP+YNP NLPLG+DGKPI +WLYKLHGLGVE+KCEICG+ SYWGRRAFDRHFQE RH+HGM+CLG+PNTKHFHDITLI+DA LY+KIR + QF + EEE+ED+EGNVL RRT++DLARQGLL
Sbjct: 142 DELEALGLDRLKGAMEALGLKCGGTLSDRADRLWSVRGVKPNDIPDKLKAKAKRAGSAD------------------------NSGDSARKKTALLEYLIQSLCSLMAEIVTATRRHAEKQQTRTLEEKLALLEEEEYGTLPDVEEA--------DDDEDDEGPLYNPLNLPLGWDGKPIPFWLYKLHGLGVEFKCEICGNQSYWGRRAFDRHFQEWRHAHGMRCLGVPNTKHFHDITLIEDALALYSKIRDSLKKEQFVEDVEEEFEDSEGNVLNRRTYEDLARQGLL 398
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: A0A7S2W3N3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3N3_9STRA) HSP 1 Score: 296 bits (758), Expect = 3.290e-92 Identity = 164/294 (55.78%), Postives = 197/294 (67.01%), Query Frame = 1
Query: 1 AEELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAKRKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEGGSSNGAELAWQEAWVRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESD----DDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
A++L LG++RLKE LEAL +KCGG+L RA+RL+SV GV I K L AK E G NG +A +E V ++ L DV +AT+R VEKRQT VEER AE+ EEE G A AGE DE D DDGP+YNP NLPLG+DGKPI +WLYKLHGLGVEYKCEICG+ SYWGRRAFDRHFQE RH+HGM+CLGIPNTKHFHDITLI+DA +LY K++ T + QF+A EEE+ED+EG+VL R+T++DLARQGLL
Sbjct: 249 AQDLEALGLQRLKEGLEALGMKCGGSLSDRAERLFSVKGVAQKDIPKNLLAKAAK----------------------KRKRDAAETGGDNGRAVAEREFGVGFMVEQLLDVVEATKRHVEKRQTQLVEERAAELEEEEFGT-MADQIAGEDGTGGLDDEEDXXXXDDGPLYNPLNLPLGWDGKPIPFWLYKLHGLGVEYKCEICGNQSYWGRRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITLIEDAINLYEKLKDTIRIEQFDAAQEEEFEDSEGHVLNRKTYEDLARQGLL 519
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: A0A7S2V2Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q3_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.410e-88 Identity = 164/293 (55.97%), Postives = 194/293 (66.21%), Query Frame = 1
Query: 1 AEELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRA---KRKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEGGSSNGAELAWQEAWVRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
A++L LGM RLKEALEAL +KCGGTL QRADRL+SV GV + I KL A KRK + + + E+A E + AL + DV TR+QVE++QT T+EER G G A + XXXXXX D+GPIYNP NLPLG+DGKPI YWLYKLHGLGVEYKCEICGD+SY GRRAFDRHFQE RH+HGM+CLGIPNTKHFHDITLI+DA L++KI+ +NA+ EEEYED+EGNVL RRT++DLARQGLL
Sbjct: 50 ADQLKALGMARLKEALEALGMKCGGTLDQRADRLFSVKGVAKEAIPPKLLANKGKRKR---------------------------QDDHSDGDRKEIALMEFEISALYEQMKDVVMNTRKQVERKQTKTMEERXXXXXXXXXGTGVAAEDE-LAXXXXXXXXXXDEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEYKCEICGDYSYMGRRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITLIEDATALFDKIKDQLAGEMWNADMEEEYEDSEGNVLNRRTYEDLARQGLL 314
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: A0A7S2HV93_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV93_9STRA) HSP 1 Score: 278 bits (712), Expect = 1.880e-85 Identity = 161/297 (54.21%), Postives = 194/297 (65.32%), Query Frame = 1
Query: 1 AEELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAKRKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEGGSSNGAE-------LAWQEAWVRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
A+E+ LG+ RLK+ AL LKCGG +RA+RLW G+ PDQ K+ A RK R G S+ E +A E + L ++DV DA RR V+K+QT VEER+AE EEE G AA+ + XXXXXXDE GP+YNP NLPLG+DGKPI YWLYKLHGLGVEYKCEICG+ SYWGRRAFDRHFQE RH++GM+CL IPNTKHFHDITLI+DA +LY+KI+ QF+A EEE+ED+EG+VL RRTF+DLARQGLL
Sbjct: 246 AKEIEALGLARLKDGCLALGLKCGGGAGERAERLWRTKGLTPDQYPSKILASRK----------------------------RKRDGKSDDKEASDSRHDVARAEFRISFLCDQMADVLDAPRRYVDKKQTQLVEERDAEFAEEESGALAALDDEEXXXXXXXXDE----GPLYNPLNLPLGWDGKPIPYWLYKLHGLGVEYKCEICGNMSYWGRRAFDRHFQEWRHAYGMRCLKIPNTKHFHDITLIEDATNLYDKIKDQLKQEQFDANQEEEFEDSEGHVLNRRTFEDLARQGLL 510
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: A0A4D9DC70_9STRA (Matrin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC70_9STRA) HSP 1 Score: 274 bits (701), Expect = 2.100e-83 Identity = 160/291 (54.98%), Postives = 195/291 (67.01%), Query Frame = 1
Query: 1 AEELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAKRKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEGGSSNGAELAWQEAWVRALLA-VLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
A+EL +GM+RLK L+AL +KCGGTL++RA RL++ G ++ID KL A G X +GG + A E + L+ VL +V +AT++ VEK+QT T EE E E+R+EEEG+ + G XXXXXX GPIYNP NLPLGYDGKPI YWLYKLHGLGVEYKCEICG+ SYWGRRAFDRHFQE RH+HGM+CL IPNTKHFHDIT I+DA LY++I+ ++AE EEE+ED+EGNVL RRTFQDLARQGLL
Sbjct: 259 AKELEVVGMDRLKAGLKALGMKCGGTLEERAARLFATKGKKKEEIDPKLLAGN---GKKXSKAEGNGPTSNGNGQGVGTDKEGGKGGEDAKKQCARWEFRIDLLVKEVLREVVEATKKFVEKKQTRTKEETETELRQEEEGLLPGLRGEGXXXXXXXXXXXXXXGPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLKIPNTKHFHDITTIKDALALYDRIKEQLKGEVYDAEVEEEFEDSEGNVLNRRTFQDLARQGLL 546
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: D7G993_ECTSI (Matrin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G993_ECTSI) HSP 1 Score: 256 bits (653), Expect = 1.320e-80 Identity = 129/190 (67.89%), Postives = 153/190 (80.53%), Query Frame = 1
Query: 301 VRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
V+ALL V +D ++T+RQV+K+ T TVEER+ EI+EEE+G A+PE E X D++GPIYNP NLPLG+DGKPI YWLYKLHGLGVE+KCEICGDFSY GRR FDRHFQE RH+HGM+CLGIPNTKHFHDI LIQDA+DLY KI+ + D Q+N E EEYED EGNVL RRT++DLARQGL+
Sbjct: 26 VKALLEVQTDTLESTKRQVDKKHTRTVEERDQEIQEEEQG---ALPEFNE----EEXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 208
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Match: A0A8J2WUM4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WUM4_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.900e-78 Identity = 142/289 (49.13%), Postives = 181/289 (62.63%), Query Frame = 1
Query: 4 EELLPLGMERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAKRKTLGXXXXXXXXXXXXXXXXXXXXXXXXPRTEGGSSNGAELAWQEAWVRALLAVLSDVWDATRRQVEKRQTLTVEEREAEIREEEEGVGAAVPEAGEGXXXXXXDESDDDGPIYNPKNLPLGYDGKPIAYWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEGRHSHGMKCLGIPNTKHFHDITLIQDAQDLYNKIRHTQDLRQFNAEAEEEYEDAEGNVLKRRTFQDLARQGLL 870
E L LG++RLK AL+AL +KCGG ++ RA RL+SV GVP D+ID KL+ K++ R E +A V ALL L V DAT R+ E++ T T +E +AE R+EE G+ A PE E DE D P+YNPKNLPLG+DG+PI YWLYKLHGL E+KCEICGD SYWGRRAFD+HF E RHSHGM+CL IPN+ HFH +T + DA L+ +++ + F AE +EEYED++GNVL R T++DLARQG+L
Sbjct: 242 ESLEALGLDRLKRALQALGMKCGGDVKARAARLFSVRGVPVDKIDAKLKTKKRA---------------------------REEPTVDRKYRTLLNDARVDALLDHLRPVLDATTRRAERKLTRTKDEIDAEARDEEFGIVQAAPEEEESD-----DEDPLDAPLYNPKNLPLGWDGRPIPYWLYKLHGLDQEFKCEICGDASYWGRRAFDQHFNEWRHSHGMRCLRIPNSAHFHGVTKMDDAVALWEQLQERHEAEAFKAERDEEYEDSDGNVLNRATYEDLARQGML 498 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig88.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig88.1.3 >prot_P-wetherbeei_contig88.1.3 ID=prot_P-wetherbeei_contig88.1.3|Name=mRNA_P-wetherbeei_contig88.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp MERLKEALEALELKCGGTLQQRADRLWSVCGVPPDQIDKKLRAKRKTLGGback to top mRNA from alignment at P-wetherbeei_contig88:3..2264+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig88.1.3 ID=mRNA_P-wetherbeei_contig88.1.3|Name=mRNA_P-wetherbeei_contig88.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2262bp|location=Sequence derived from alignment at P-wetherbeei_contig88:3..2264+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig88:3..2264+ >mRNA_P-wetherbeei_contig88.1.3 ID=mRNA_P-wetherbeei_contig88.1.3|Name=mRNA_P-wetherbeei_contig88.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig88:3..2264+ (Phaeothamnion wetherbeei SAG_119_79)back to top |