mRNA_P-wetherbeei_contig879.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig879.4.1
Unique NamemRNA_P-wetherbeei_contig879.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: D8LK48_ECTSI (Possible Cdc2-related protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK48_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 5.250e-78
Identity = 157/376 (41.76%), Postives = 210/376 (55.85%), Query Frame = 2
Query:  401 VRGRWGDEPWQNFELIKSNIRAVSRLRRKGVTPPRNTSPVRKGDISDYDSDDEMAQCQCRP--DSPGGRTCHDNSCINYATNTECPKGHCNPGCCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXG-----SMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGEDDAE----GEEVLGLDGXXXXXXXXXXXXXXXXXXXXXAKWQIWEESE 1495
            ++  WG E WQ+FEL+++N+         G     +  P   G  SD   + E  +C C P    P   TC+D+ C NY T  EC K     GC NQ +Q R  A++EV       KG GL+++EPV +G F+ EYVGEII  +EL++RM S   G  +LYMMQL  + YLDAKR+GGIARF+NHSCEP CRLE+W A     CAVF+ R M AGEELSFDYQW  H  R+ TKCLC +  CRGT+EV   +              G     +MG +R P+ ++ A P  L GR+VR+Y+DGD  Y+ A V  Y P+T  H++LY GE + E     E+++G+ G                      KWQIWE+++
Sbjct:  177 LKADWGRESWQDFELLQNNV--------PGPGTKGHGGPGAVGGKSDMGGELEEHECNCTPVGGDPNAPTCYDDQCHNYVTMQECRKXXXXRGCRNQRIQKRENAQVEVFKADG--KGMGLKVVEPVSKGQFIAEYVGEIITRKELNKRMISSA-GTRKLYMMQLGDDTYLDAKRKGGIARFVNHSCEPTCRLEQWTAMGQPRCAVFSLRAMKAGEELSFDYQWEAHHLRENTKCLCGSPQCRGTIEVINPNADPNVESGGGPFARGRAPASAMGVWRTPKNDEYATPEALVGRKVRVYFDGDCTYFEAQVKRYKPDTKTHMLLYAGEGERELDELEEDLIGVQGKIQGID----------------KWQIWEQTD 525          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A7R9UE77_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE77_9STRA)

HSP 1 Score: 199 bits (507), Expect = 8.890e-51
Identity = 110/280 (39.29%), Postives = 158/280 (56.43%), Query Frame = 2
Query:  557 EMAQCQCRPDSPGGRTCHDNSCINYATNTECPKGHCNPG--CCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQS-DGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLE--VDELDNXXXXXXXXXXXXXGSMGYFRMPR-AEDVAEPTQ-LQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGEDDAE 1375
            E+ QC+C   +   R C D  C+N +   EC  GHC  G  C NQ +Q + + K+ V   G   KG GL   E + +G  +IEY+GE+I  +EL +R+++ D +     Y M+L    +LD++  G   RF+NHSCEP  R+E+W  G  +     A+R + AGEE++ DY+W    G+++TKCLC A TCR  LE   ++L                  G +R P  +E V E  + L GRRVRI+WDG+  Y+  TV E++PETGKH V+YD E D+E
Sbjct:   26 EIHQCECALSAGAERGCDDERCLNRSCCIECLPGHCRLGARCANQRIQNKEFCKVRVFDAGG--KGKGLEAEEDIEKGTLVIEYLGEVIGEDELVKRLRANDRERRVVRYFMELRKGAFLDSQFFGSAGRFVNHSCEPNARVEKWHVGNEIRVVFVAERGIKAGEEITIDYKWEHTTGQRRTKCLCGAKTCRQWLEKGAEQLQILR--------------GDWRKPHESERVVERAEHLVGRRVRIFWDGNDGYFTGTVAEFSPETGKHKVIYDDETDSE 289          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A7S4IVS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IVS6_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.090e-48
Identity = 106/265 (40.00%), Postives = 152/265 (57.36%), Query Frame = 2
Query:  569 CQCRPD-SPGGRTCHDNSCINYATNTECPKGHCNPG--CCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLY 1354
            C C PD S     C D++C+ +A   EC + +C+ G  C N+ +Q R +  L+V   G   KG GLR LEPV+ G F  EYVG  I  + L+  + +  Q    LY+M L ++ Y+DA++RGGIAR+INHSCEP C+++RW+        V A +D+A GEELSFDYQW+  +GR  TKC C +A CRGTLE+ +                 S G    PR    A    +  R ++++++G+  YY A V  Y+ +TGKH+V+Y
Sbjct:  139 CGCFPDVSRRTPCCVDDTCVMFACQEEC-RSNCDAGPYCGNKRIQRREWKDLQVFDAG--VKGRGLRALEPVKRGDFCTEYVGVAIKKKYLED-VFARYQRERMLYIMALDNDVYIDARKRGGIARYINHSCEPNCKVDRWKVRGISRACVIALQDVAVGEELSFDYQWTRKRGRAPTKCYCGSALCRGTLEMPKESTLEDEEMETKLLGHWSPG----PRGAGRA----IMNRTIKVWYEGNQEYYVADVYNYDAKTGKHLVIY 391          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A835Z9P9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 6.150e-48
Identity = 84/133 (63.16%), Postives = 98/133 (73.68%), Query Frame = 2
Query:  743 KGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQ-----GASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRG 1126
            KG GLR+LE V+    L+EYVGE+I   E  +RMQ   Q      A+ LY+MQLA N +LDAKR+GG+ARFINHSCEP CRL+RWRAG  + CAVFA RD+AAG ELSFDYQW  HK R+KTKCLC A  CRG
Sbjct:    1 KGWGLRVLEDVKADQLLVEYVGEVIGPIERAKRMQEVRQHPRRIDAASLYVMQLAQNLFLDAKRKGGVARFINHSCEPTCRLDRWRAGGRVRCAVFAKRDLAAGTELSFDYQWGHHKARQKTKCLCGAPACRG 133          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A6G0XNK9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNK9_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.940e-45
Identity = 107/279 (38.35%), Postives = 148/279 (53.05%), Query Frame = 2
Query:  557 EMAQCQCRPDSPGGRTCHDNSCINYATNTECPKGHC--NPGCCNQNLQLRR-YAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGEDDAEGEE 1384
            E   C C     G  +CHD  CINYAT  ECP   C  N  CCNQ LQ    + +LE   T    KG+G+R+ + V   A + EYVGE+I+ +EL RR  + G+     Y +QLA   Y+DA+ RGG  RF+NHSC P C+ E+W         VFA RD++AGEE++FDYQW T  GR++ KC C    C+G +  DE++                 G F+ P  +D  E   L GR++RI+   D  +    V  Y P T +H +    E+D +G++
Sbjct:   34 EAEPCFCSASEDGNESCHDTECINYATYVECPLNQCPTNSQCCNQRLQHPELFPRLEPFMT--EMKGYGVRIRDAVAALAPIGEYVGEVINQKELFRRTTALGRLEINFYYIQLAPGVYIDARNRGGFTRFVNHSCNPNCKAEKWTVNGETRLLVFALRDLSAGEEITFDYQW-TVLGRQRIKCFCGEPNCKGFIG-DEVEQKVEETP---------QGMFQDPTEDDCDE--SLVGRKLRIFQRDDATFSVVIVKRYIPSTNEHEIADVMEEDNDGDD 297          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A7S2PVY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PVY0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.060e-44
Identity = 106/277 (38.27%), Postives = 147/277 (53.07%), Query Frame = 2
Query:  569 CQCRPD-SPGGRTCHDNSCINYATN----TECPKGHCNPGCCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLE-------VDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGE 1363
            C C PD     + C D +C  YA      T CP G   P C N+ +Q + + +L V   G   KG GL + EPV +G F+IEYVG  +  + LD  + +  +    LY+M L  + YLDA+ RGGIAR+INHSCEP C + RWR    +   VFA RD+  GEELSFDYQW   +GR  T+C C +  CRGTLE       V+EL+              G +G              ++  R +++Y+D D   Y A V +Y+PE+G+H ++Y G+
Sbjct:   48 CFCEPDIDTESKCCIDETCALYACQEECGTSCPGG---PLCGNKRIQRKEWKRLSVFDAG--LKGRGLMVQEPVYKGEFIIEYVGVAVKRQYLDG-LFARYKHERMLYIMALDGDIYLDARHRGGIARYINHSCEPNCVVHRWRVRGIIRACVFALRDIGTGEELSFDYQWDRKRGRAVTRCYCGSEKCRGTLEIPKDFEEVEELEELEGHWIEPNTNSSGRVG-------------KEIMNRVIKVYFDDDGEDYVADVAQYDPESGRHQLMYRGD 305          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A7S2E5Z3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5Z3_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.160e-44
Identity = 98/266 (36.84%), Postives = 147/266 (55.26%), Query Frame = 2
Query:  569 CQCRPDSPGGRTCHDNSCINYATNTECPKG-HCNPGCCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELD---RRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLY 1354
            C C+P   GG  C D SC+ +A   EC     C   C N+ +  R +   +V   G   KG GLR +E +++  F+ EYVG  +  + LD    R +S+      LY+M L HN Y+DA++RGGIAR+INHSC+P C + RWR    +  A+FA RD+  GEELSFDYQW   +GR  T+C C +ATCRGTLE+ ++                  G++  P++       ++  R ++IY+ G++ Y+   V +Y+    KH+++Y
Sbjct:  438 CGCQPH--GGACCMDASCVLFACQEECQSNCECGEYCGNKRITYRIWKDTQVFDAG--VKGRGLRAMEAIKKDDFITEYVGVCVKRKYLDDLFARYKSERM----LYIMALDHNIYIDARKRGGIARYINHSCDPNCVVHRWRVQGVIRAAIFALRDIQPGEELSFDYQWERKRGRALTRCYCKSATCRGTLELSKVTTLEEEEWELKLS-----GHWVKPKSFTAGH--EIVNRCIKIYFQGNHEYFVGEVSQYDDGNKKHLIVY 688          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A485LGP0_9STRA (Aste57867_20880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGP0_9STRA)

HSP 1 Score: 176 bits (447), Expect = 4.140e-43
Identity = 114/317 (35.96%), Postives = 157/317 (49.53%), Query Frame = 2
Query:  431 QNFELIKSNIRAVSRLRRKGVTPPRNTSPVRKGDISDYDSDDEMAQCQCRPDSPGGRTCHDNSCINYATNTECPKGHCNPG--CCNQNLQL-RRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYR--YYAATVGEYNPETGKHVVLYDGED 1366
            + FELI+ ++               +  P+ K   SD +       C C P +     CH   CINYAT  ECP   C  G  C NQ LQ    + +LE   T    KG+G+R  +PV   + + EYVGEIID  EL RR  + G+  S  Y +QL    Y+DA+ RGG  RF+NHSC P C+ E+W  G      VFA RD+A G E++FDYQW T  GR++ KC C   TC+G +  DE++                 G F+ P  +D  +  QL GR++R++        +    V  YNP+T +H V  D +D
Sbjct:   15 RGFELIERSV---------------HVPPLTKPPCSDAEP------CFCSPSADEVDACHTTECINYATYVECPLDRCATGNQCRNQRLQRPEEFPRLEPFLT--EMKGYGVRTCDPVPALSPVGEYVGEIIDQRELYRRTSALGRHESNFYYIQLTPGVYIDARNRGGFTRFVNHSCNPNCKAEKWTVGGETRLLVFALRDLAPGIEITFDYQW-TVLGRQRIKCFCGEETCKGFIG-DEVEGKTLE---------APQGIFKDPEDDDGVKD-QLVGRKLRLFQSHSENAAFSVVRVTRYNPDTDEHTVADDTDD 296          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A2D4BU95_PYTIN (CMGC/CDK protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU95_PYTIN)

HSP 1 Score: 171 bits (434), Expect = 1.890e-41
Identity = 109/321 (33.96%), Postives = 157/321 (48.91%), Query Frame = 2
Query:  422 EPWQNFELIKSNIRAVSRLRRKGVTPPRNTSPVRKGDISDYDSDDEMAQCQC---RPDSPGG-RTCHDNSCINYATNTECPKGHCNPG--CCNQNLQL-RRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYR--YYAATVGEYNPETGKHVVLYD 1357
            E  +N  L+  N   ++ L R+ +  P                DD  A C C   RP+ P     C D SCIN+AT  EC    C+ G  C NQ LQ   R+ +LE   T    KG+G+R  + + +G  + EYVGEIID  EL RR+ +  +     Y + L    Y+DA+ +G   RF+NHSCEP C+ E+W        AV A RD+ A EEL+FDYQW    G K  KC C +A C+G +  +  +N              + G+FR P  E++   + + GRR+R++W  +    Y  ATV  +  E   + + Y+
Sbjct:   26 EAVRNITLLTRNEYPLAHLPREKLFKP----------------DDAHAVCFCTFPRPEEPEPIARCDDVSCINFATYIECSPSRCDAGKYCQNQRLQHPERFPRLEAFKTQH--KGYGVRARDAIAQGTVIGEYVGEIIDQRELTRRLNTVPRNELNFYYLALEPGVYIDARNKGSFTRFMNHSCEPNCKTEKWTVEGETRIAVLAVRDIGAREELTFDYQWKA-LGSKSIKCFCESANCKGVIGAEATNNALDCEDE-------AQGFFREPTKEEIG--SAIVGRRIRLFWSPEDTSLYSCATVRRFVEEDNTYELEYE 318          
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A397G474_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397G474_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.910e-41
Identity = 101/272 (37.13%), Postives = 137/272 (50.37%), Query Frame = 2
Query:  557 EMAQCQCRPDSPGGRTCHDNSCINYATNTECPKGHC--NPGCCNQNLQLRR-YAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIY----WDGDYRYYAATVGEYNPETGKHVVL 1351
            E   C C         CHD  CINYAT  ECP   C    GC NQ LQ    +  LE   T    KG+G+R  E VR    + EYVGEII  +EL RR    G+  +  Y +Q+++  Y+DA+ RGG  RF+NHSC P C+ E+W  G      VFA R++A G+E++FDYQW T  GR++ KC C  + C+G +  D   N                G F+ P   D  +   L GR +R++     DG + +    V  Y+P T +H V+
Sbjct:   41 EAEPCFCSSTDSSEVACHDTECINYATYVECPLDRCPTGRGCRNQRLQRPDLFPHLEPFQT--EFKGYGVRTTERVRALDPVGEYVGEIIGQKELLRRTNGLGRMETNFYYIQMSNGVYIDARHRGGFTRFVNHSCNPNCKAEKWTVGGETRLLVFALRELAPGDEITFDYQW-TLLGRQRIKCFCGESVCKGFIGGDVEKNPTDTPD----------GVFQDPTDADTVDE-YLVGRTLRLFNPSSGDGSHSFSIVLVKSYDPNTREHTVV 298          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK48_ECTSI5.250e-7841.76Possible Cdc2-related protein kinase n=2 Tax=Ectoc... [more]
A0A7R9UE77_9STRA8.890e-5139.29Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4IVS6_9STRA2.090e-4840.00Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A835Z9P9_9STRA6.150e-4863.16Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6G0XNK9_9STRA1.940e-4538.35Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A7S2PVY0_9STRA1.060e-4438.27Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2E5Z3_9STRA1.160e-4436.84Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A485LGP0_9STRA4.140e-4335.96Aste57867_20880 protein n=1 Tax=Aphanomyces stella... [more]
A0A2D4BU95_PYTIN1.890e-4133.96CMGC/CDK protein kinase n=1 Tax=Pythium insidiosum... [more]
A0A397G474_9STRA1.910e-4137.13Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig879contigP-wetherbeei_contig879:5226..8306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LK48
PFAMsPkinase,SET
Model size1766
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K00924,ko:K06101,ko:K11423,ko:K16675
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04391,map00310,map04391
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.53e-79
EggNOG OGsCOG2940@1|root,KOG0594@1|root,KOG0594@2759|Eukaryota,KOG1083@2759|Eukaryota
EC2.1.1.43,2.3.1.225
Descriptionuterine gland development
Cds size1578
COG categoryH
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187059.768935-UTR-P-wetherbeei_contig879:5225..54121683187059.768935-UTR-P-wetherbeei_contig879:5225..5412Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig879 5226..5412 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187059.7818391-CDS-P-wetherbeei_contig879:5412..59191683187059.7818391-CDS-P-wetherbeei_contig879:5412..5919Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig879 5413..5919 +
1683187059.7942114-CDS-P-wetherbeei_contig879:6402..67711683187059.7942114-CDS-P-wetherbeei_contig879:6402..6771Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig879 6403..6771 +
1683187059.8050387-CDS-P-wetherbeei_contig879:7256..74051683187059.8050387-CDS-P-wetherbeei_contig879:7256..7405Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig879 7257..7405 +
1683187059.814332-CDS-P-wetherbeei_contig879:7753..83061683187059.814332-CDS-P-wetherbeei_contig879:7753..8306Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig879 7754..8306 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig879.4.1prot_P-wetherbeei_contig879.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig879 5413..8306 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig879.4.1

>prot_P-wetherbeei_contig879.4.1 ID=prot_P-wetherbeei_contig879.4.1|Name=mRNA_P-wetherbeei_contig879.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=526bp
MSLGDNGARGADDSEKEEFESAARPLRTTGATLVVKRAEGGPTSATAGDE
VSNKGRNSKEGAGGGSSSGGGVRGRWGDEPWQNFELIKSNIRAVSRLRRK
GVTPPRNTSPVRKGDISDYDSDDEMAQCQCRPDSPGGRTCHDNSCINYAT
NTECPKGHCNPGCCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGA
FLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIAR
FINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRK
KTKCLCAAATCRGTLEVDELDNDNDPLGLGAGLGLGSMGYFRMPRAEDVA
EPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGEDDAEGEEV
LGLDGGGGGDDDGGGDDGGDGGGGGVAKWQIWEESETAVVIARREKTSES
GTTDVETDSDEGRRDRESQEERSRRLAAVTQRREHRPPPPPPPPFVPPRI
MESYFVASTEVPKLVGARGGAIMAVQ
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mRNA from alignment at P-wetherbeei_contig879:5226..8306+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig879.4.1 ID=mRNA_P-wetherbeei_contig879.4.1|Name=mRNA_P-wetherbeei_contig879.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3081bp|location=Sequence derived from alignment at P-wetherbeei_contig879:5226..8306+ (Phaeothamnion wetherbeei SAG_119_79)
GTTTCCCGAAGGAGGGCGATAAAAACGCCGGAGGAAGCCCTACCAACTTC AGGATCCCTCATTTGGCGAGTTTGGTCAGCACTCGTGTCCTTGAAGCGCA AAATCGTCGTCAAATTGTGGCAGTCGCTTCCCTCATAGAGGACTCACAAG CGATCTTTTGGCCTCATAAGAAGCTTTGGATCGCGCGATGAGCCTAGGCG ACAATGGCGCTCGAGGCGCCGATGACTCCGAGAAAGAGGAGTTCGAGTCT GCCGCTCGTCCTCTTCGAACTACCGGTGCGACGTTGGTCGTCAAGAGAGC TGAAGGGGGGCCTACCTCGGCTACCGCAGGAGACGAGGTCTCGAATAAAG GAAGGAACAGCAAAGAAGGCGCGGGAGGTGGCAGCAGCAGCGGCGGCGGC GTTAGGGGGCGATGGGGCGACGAGCCCTGGCAAAACTTCGAGCTGATAAA GTCCAACATCCGCGCTGTGTCGCGGCTCCGGCGTAAGGGCGTCACGCCAC CGAGGAACACATCCCCCGTCCGCAAGGGCGACATTTCGGACTACGACTCG GACGACGAGATGGCGCAGTGCCAATGCCGCCCGGACAGCCCTGGCGGCCG CACCTGCCACGACAACAGCTGCATCAACTACGCCACCAATACGGAGTGCC CAAAGGGCCACTGCAACCCCGGATGCTGCAACCAGAACCTGCAGGTTAGA GGGGGCAAATGACAGTCTTGTCCACTAATCTTCCCTGTCATTTTCGTGCA GTTGCTGGCCATTTGTTTGCAATGGGTGAAAGGCGAATGCCTGTTGTGCC ACTAATCTGTTATCATTTATCCGTTTTAAAAACTTAAATTGGCGGGCGAA CTTGCCGCTGCTAGACAGTACTGTTCTTATGTTCATTTTACCCTAGACTT AGCGCCGTTTTCCACAATCTCCGTTTTATCCTTTTTTGCACTGCTCTTGC AGATTTGCGACGCGCAGGTGGCACTTTTCTTTGATTTGCGGTAGTTTCCC TCCACCCGTCCCCGACCAGCAACAATAAAACAACGCAATAAACTTAAAAA TCTGACCCGTCAAATGGACGCGATTTCCCTCCTCTTCATGCCGCCCTTAA ATGACGCGCCGCCGTCCCGCCCTTTCGCCCCAAATGCCGTCGCCTCACCC ATCCTGGCTGGCCCTGCCCCACGGTAGCTGCGGCGCTACGCCAAGCTCGA AGTGGCCCACACGGGGAGCGCCGCCAAGGGCCACGGCCTCCGCTTGTTGG AGCCCGTCCGGGAGGGCGCCTTCCTCATCGAGTATGTCGGTGAAATAATC GACGCCGAGGAGCTGGACCGCCGGATGCAGTCGGATGGCCAGGGCGCGTC CCGGCTCTACATGATGCAGCTGGCGCACAACCAGTACCTGGACGCCAAGC GGCGCGGCGGCATCGCGCGCTTCATCAACCACAGCTGCGAGCCGGCGTGC AGACTCGAGCGGTGGCGGGCTGGGCCGCACCTGTGCTGCGCCGTCTTCGC GGACCGCGACATGGCCGCCGGCGAGGAGCTTTCTTTCGACTACCAGGTAT GACGCTACTTGTAATTGCTGTCTTAATCTGTACGCGGACTGCTTTTGGGA TTTTGACTTCTTTTTGAAATATTCTGGTGTTTTGTTTTGTTTCAAAGGGG TGTGGTGGACGAGCTGGTTTCCTTACGCCCTTCCACTTCTCTTGGTTGCT CCTTCTTCTCATGCGTTGAAGGTTGTGCCTGTTTCGTTTTTAGCGATTTT TGGTAGCGCGTCTCCGTTGGTTGGCCGGCTGATATGGCCTTGGCTTAGCC TTTATTGGCATATCCGCTTGCTTCCTCTTGGAAAAGCGCCGCTGACGCCG CTTTCGCCTATTTGCATGTCCGCTTGTATCATCTCGGAAAAGCACCGCTA TCGCCTATTTCTTGCCCTCTCTTGGCTGCCGCCGCTGTCGCTGCCACGGT CACCACCAAATGTTCTCCTTGTTCTTTCCCTCCTCTTGCCCCCTTCTCCT CCGATTAACCGGCGCGGTTGGGAGGAAGCAGTGGTCGACGCACAAGGGGC GCAAGAAGACGAAGTGCCTTTGCGCAGCGGCGACGTGCCGTGGGACGCTT GAGGTGGACGAGCTCGACAACGACAACGACCCGCTCGGGCTCGGTGCCGG ACTCGGCCTCGGCTCCATGGGCTACTTCCGGTGAGCAAGAGGAAAGGAAA CGGAGAGAACACAGCGGGCGGGACAAATGGGACTGTGTTCTAGTCGTGGA GGCAGGGATGTGGCGGTGTCAGGGGGTGCGCGAGGCTGGCGGCTGCCGGC GACGACTGCGGCGACAACGGCGGCGGGCAGCGTGTGTGGCATGGCAGCGA CTTCGCGCGTTTAGTTAACCGCGACAGGAAAAGATGAAGCGCCTGTTATC TTCTTGAACGGTGTTCTCTGAAGGCAGCTTTGCCGCAATGCGTCATCCTT CTCCCTCTTCCTCTGCTCCGCCCGTGCAATGCATCTCTCCCTCCCTCCCT TTCTCTGCTGTTGCTACTGCTGCTGCAGGATGCCACGAGCGGAGGATGTG GCCGAACCGACGCAGCTGCAGGGCCGCCGCGTGCGCATCTACTGGGATGG CGACTACCGCTATTACGCCGCCACGGTAGGCGAGTACAATCCCGAAACGG GGAAGCACGTCGTGCTGTACGATGGCGAGGACGACGCGGAGGGCGAGGAG GTTTTGGGGCTCGATGGAGGCGGCGGCGGCGACGACGACGGCGGCGGCGA TGACGGTGGCGATGGCGGCGGCGGCGGCGTGGCGAAGTGGCAGATCTGGG AGGAGTCGGAGACGGCGGTGGTGATTGCGCGGCGCGAAAAGACGTCGGAG AGCGGCACGACGGACGTGGAGACGGACAGCGACGAGGGGCGGCGCGACCG CGAAAGCCAAGAGGAACGGAGCCGCCGGCTAGCGGCCGTGACGCAGCGGC GGGAGCACCGGCCACCCCCGCCGCCGCCACCGCCGTTTGTGCCGCCGCGC ATCATGGAGAGCTACTTTGTGGCGTCGACGGAGGTGCCGAAGCTTGTGGG TGCCCGCGGCGGCGCCATCATGGCCGTTCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig879:5226..8306+

>mRNA_P-wetherbeei_contig879.4.1 ID=mRNA_P-wetherbeei_contig879.4.1|Name=mRNA_P-wetherbeei_contig879.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1578bp|location=Sequence derived from alignment at P-wetherbeei_contig879:5226..8306+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCCTAGGCGACAATGGCGCTCGAGGCGCCGATGACTCCGAGAAAGA
GGAGTTCGAGTCTGCCGCTCGTCCTCTTCGAACTACCGGTGCGACGTTGG
TCGTCAAGAGAGCTGAAGGGGGGCCTACCTCGGCTACCGCAGGAGACGAG
GTCTCGAATAAAGGAAGGAACAGCAAAGAAGGCGCGGGAGGTGGCAGCAG
CAGCGGCGGCGGCGTTAGGGGGCGATGGGGCGACGAGCCCTGGCAAAACT
TCGAGCTGATAAAGTCCAACATCCGCGCTGTGTCGCGGCTCCGGCGTAAG
GGCGTCACGCCACCGAGGAACACATCCCCCGTCCGCAAGGGCGACATTTC
GGACTACGACTCGGACGACGAGATGGCGCAGTGCCAATGCCGCCCGGACA
GCCCTGGCGGCCGCACCTGCCACGACAACAGCTGCATCAACTACGCCACC
AATACGGAGTGCCCAAAGGGCCACTGCAACCCCGGATGCTGCAACCAGAA
CCTGCAGCTGCGGCGCTACGCCAAGCTCGAAGTGGCCCACACGGGGAGCG
CCGCCAAGGGCCACGGCCTCCGCTTGTTGGAGCCCGTCCGGGAGGGCGCC
TTCCTCATCGAGTATGTCGGTGAAATAATCGACGCCGAGGAGCTGGACCG
CCGGATGCAGTCGGATGGCCAGGGCGCGTCCCGGCTCTACATGATGCAGC
TGGCGCACAACCAGTACCTGGACGCCAAGCGGCGCGGCGGCATCGCGCGC
TTCATCAACCACAGCTGCGAGCCGGCGTGCAGACTCGAGCGGTGGCGGGC
TGGGCCGCACCTGTGCTGCGCCGTCTTCGCGGACCGCGACATGGCCGCCG
GCGAGGAGCTTTCTTTCGACTACCAGTGGTCGACGCACAAGGGGCGCAAG
AAGACGAAGTGCCTTTGCGCAGCGGCGACGTGCCGTGGGACGCTTGAGGT
GGACGAGCTCGACAACGACAACGACCCGCTCGGGCTCGGTGCCGGACTCG
GCCTCGGCTCCATGGGCTACTTCCGGATGCCACGAGCGGAGGATGTGGCC
GAACCGACGCAGCTGCAGGGCCGCCGCGTGCGCATCTACTGGGATGGCGA
CTACCGCTATTACGCCGCCACGGTAGGCGAGTACAATCCCGAAACGGGGA
AGCACGTCGTGCTGTACGATGGCGAGGACGACGCGGAGGGCGAGGAGGTT
TTGGGGCTCGATGGAGGCGGCGGCGGCGACGACGACGGCGGCGGCGATGA
CGGTGGCGATGGCGGCGGCGGCGGCGTGGCGAAGTGGCAGATCTGGGAGG
AGTCGGAGACGGCGGTGGTGATTGCGCGGCGCGAAAAGACGTCGGAGAGC
GGCACGACGGACGTGGAGACGGACAGCGACGAGGGGCGGCGCGACCGCGA
AAGCCAAGAGGAACGGAGCCGCCGGCTAGCGGCCGTGACGCAGCGGCGGG
AGCACCGGCCACCCCCGCCGCCGCCACCGCCGTTTGTGCCGCCGCGCATC
ATGGAGAGCTACTTTGTGGCGTCGACGGAGGTGCCGAAGCTTGTGGGTGC
CCGCGGCGGCGCCATCATGGCCGTTCAG
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