mRNA_P-wetherbeei_contig879.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: D8LK48_ECTSI (Possible Cdc2-related protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK48_ECTSI) HSP 1 Score: 280 bits (715), Expect = 5.250e-78 Identity = 157/376 (41.76%), Postives = 210/376 (55.85%), Query Frame = 2
Query: 401 VRGRWGDEPWQNFELIKSNIRAVSRLRRKGVTPPRNTSPVRKGDISDYDSDDEMAQCQCRP--DSPGGRTCHDNSCINYATNTECPKGHCNPGCCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXG-----SMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGEDDAE----GEEVLGLDGXXXXXXXXXXXXXXXXXXXXXAKWQIWEESE 1495
++ WG E WQ+FEL+++N+ G + P G SD + E +C C P P TC+D+ C NY T EC K GC NQ +Q R A++EV KG GL+++EPV +G F+ EYVGEII +EL++RM S G +LYMMQL + YLDAKR+GGIARF+NHSCEP CRLE+W A CAVF+ R M AGEELSFDYQW H R+ TKCLC + CRGT+EV + G +MG +R P+ ++ A P L GR+VR+Y+DGD Y+ A V Y P+T H++LY GE + E E+++G+ G KWQIWE+++
Sbjct: 177 LKADWGRESWQDFELLQNNV--------PGPGTKGHGGPGAVGGKSDMGGELEEHECNCTPVGGDPNAPTCYDDQCHNYVTMQECRKXXXXRGCRNQRIQKRENAQVEVFKADG--KGMGLKVVEPVSKGQFIAEYVGEIITRKELNKRMISSA-GTRKLYMMQLGDDTYLDAKRKGGIARFVNHSCEPTCRLEQWTAMGQPRCAVFSLRAMKAGEELSFDYQWEAHHLRENTKCLCGSPQCRGTIEVINPNADPNVESGGGPFARGRAPASAMGVWRTPKNDEYATPEALVGRKVRVYFDGDCTYFEAQVKRYKPDTKTHMLLYAGEGERELDELEEDLIGVQGKIQGID----------------KWQIWEQTD 525
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A7R9UE77_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE77_9STRA) HSP 1 Score: 199 bits (507), Expect = 8.890e-51 Identity = 110/280 (39.29%), Postives = 158/280 (56.43%), Query Frame = 2
Query: 557 EMAQCQCRPDSPGGRTCHDNSCINYATNTECPKGHCNPG--CCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQS-DGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLE--VDELDNXXXXXXXXXXXXXGSMGYFRMPR-AEDVAEPTQ-LQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGEDDAE 1375
E+ QC+C + R C D C+N + EC GHC G C NQ +Q + + K+ V G KG GL E + +G +IEY+GE+I +EL +R+++ D + Y M+L +LD++ G RF+NHSCEP R+E+W G + A+R + AGEE++ DY+W G+++TKCLC A TCR LE ++L G +R P +E V E + L GRRVRI+WDG+ Y+ TV E++PETGKH V+YD E D+E
Sbjct: 26 EIHQCECALSAGAERGCDDERCLNRSCCIECLPGHCRLGARCANQRIQNKEFCKVRVFDAGG--KGKGLEAEEDIEKGTLVIEYLGEVIGEDELVKRLRANDRERRVVRYFMELRKGAFLDSQFFGSAGRFVNHSCEPNARVEKWHVGNEIRVVFVAERGIKAGEEITIDYKWEHTTGQRRTKCLCGAKTCRQWLEKGAEQLQILR--------------GDWRKPHESERVVERAEHLVGRRVRIFWDGNDGYFTGTVAEFSPETGKHKVIYDDETDSE 289
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A7S4IVS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IVS6_9STRA) HSP 1 Score: 187 bits (475), Expect = 2.090e-48 Identity = 106/265 (40.00%), Postives = 152/265 (57.36%), Query Frame = 2
Query: 569 CQCRPD-SPGGRTCHDNSCINYATNTECPKGHCNPG--CCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLY 1354
C C PD S C D++C+ +A EC + +C+ G C N+ +Q R + L+V G KG GLR LEPV+ G F EYVG I + L+ + + Q LY+M L ++ Y+DA++RGGIAR+INHSCEP C+++RW+ V A +D+A GEELSFDYQW+ +GR TKC C +A CRGTLE+ + S G PR A + R ++++++G+ YY A V Y+ +TGKH+V+Y
Sbjct: 139 CGCFPDVSRRTPCCVDDTCVMFACQEEC-RSNCDAGPYCGNKRIQRREWKDLQVFDAG--VKGRGLRALEPVKRGDFCTEYVGVAIKKKYLED-VFARYQRERMLYIMALDNDVYIDARKRGGIARYINHSCEPNCKVDRWKVRGISRACVIALQDVAVGEELSFDYQWTRKRGRAPTKCYCGSALCRGTLEMPKESTLEDEEMETKLLGHWSPG----PRGAGRA----IMNRTIKVWYEGNQEYYVADVYNYDAKTGKHLVIY 391
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A835Z9P9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P9_9STRA) HSP 1 Score: 173 bits (438), Expect = 6.150e-48 Identity = 84/133 (63.16%), Postives = 98/133 (73.68%), Query Frame = 2
Query: 743 KGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQ-----GASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRG 1126
KG GLR+LE V+ L+EYVGE+I E +RMQ Q A+ LY+MQLA N +LDAKR+GG+ARFINHSCEP CRL+RWRAG + CAVFA RD+AAG ELSFDYQW HK R+KTKCLC A CRG
Sbjct: 1 KGWGLRVLEDVKADQLLVEYVGEVIGPIERAKRMQEVRQHPRRIDAASLYVMQLAQNLFLDAKRKGGVARFINHSCEPTCRLDRWRAGGRVRCAVFAKRDLAAGTELSFDYQWGHHKARQKTKCLCGAPACRG 133
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A6G0XNK9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNK9_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.940e-45 Identity = 107/279 (38.35%), Postives = 148/279 (53.05%), Query Frame = 2
Query: 557 EMAQCQCRPDSPGGRTCHDNSCINYATNTECPKGHC--NPGCCNQNLQLRR-YAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGEDDAEGEE 1384
E C C G +CHD CINYAT ECP C N CCNQ LQ + +LE T KG+G+R+ + V A + EYVGE+I+ +EL RR + G+ Y +QLA Y+DA+ RGG RF+NHSC P C+ E+W VFA RD++AGEE++FDYQW T GR++ KC C C+G + DE++ G F+ P +D E L GR++RI+ D + V Y P T +H + E+D +G++
Sbjct: 34 EAEPCFCSASEDGNESCHDTECINYATYVECPLNQCPTNSQCCNQRLQHPELFPRLEPFMT--EMKGYGVRIRDAVAALAPIGEYVGEVINQKELFRRTTALGRLEINFYYIQLAPGVYIDARNRGGFTRFVNHSCNPNCKAEKWTVNGETRLLVFALRDLSAGEEITFDYQW-TVLGRQRIKCFCGEPNCKGFIG-DEVEQKVEETP---------QGMFQDPTEDDCDE--SLVGRKLRIFQRDDATFSVVIVKRYIPSTNEHEIADVMEEDNDGDD 297
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A7S2PVY0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PVY0_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.060e-44 Identity = 106/277 (38.27%), Postives = 147/277 (53.07%), Query Frame = 2
Query: 569 CQCRPD-SPGGRTCHDNSCINYATN----TECPKGHCNPGCCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLE-------VDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLYDGE 1363
C C PD + C D +C YA T CP G P C N+ +Q + + +L V G KG GL + EPV +G F+IEYVG + + LD + + + LY+M L + YLDA+ RGGIAR+INHSCEP C + RWR + VFA RD+ GEELSFDYQW +GR T+C C + CRGTLE V+EL+ G +G ++ R +++Y+D D Y A V +Y+PE+G+H ++Y G+
Sbjct: 48 CFCEPDIDTESKCCIDETCALYACQEECGTSCPGG---PLCGNKRIQRKEWKRLSVFDAG--LKGRGLMVQEPVYKGEFIIEYVGVAVKRQYLDG-LFARYKHERMLYIMALDGDIYLDARHRGGIARYINHSCEPNCVVHRWRVRGIIRACVFALRDIGTGEELSFDYQWDRKRGRAVTRCYCGSEKCRGTLEIPKDFEEVEELEELEGHWIEPNTNSSGRVG-------------KEIMNRVIKVYFDDDGEDYVADVAQYDPESGRHQLMYRGD 305
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A7S2E5Z3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5Z3_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.160e-44 Identity = 98/266 (36.84%), Postives = 147/266 (55.26%), Query Frame = 2
Query: 569 CQCRPDSPGGRTCHDNSCINYATNTECPKG-HCNPGCCNQNLQLRRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELD---RRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYRYYAATVGEYNPETGKHVVLY 1354
C C+P GG C D SC+ +A EC C C N+ + R + +V G KG GLR +E +++ F+ EYVG + + LD R +S+ LY+M L HN Y+DA++RGGIAR+INHSC+P C + RWR + A+FA RD+ GEELSFDYQW +GR T+C C +ATCRGTLE+ ++ G++ P++ ++ R ++IY+ G++ Y+ V +Y+ KH+++Y
Sbjct: 438 CGCQPH--GGACCMDASCVLFACQEECQSNCECGEYCGNKRITYRIWKDTQVFDAG--VKGRGLRAMEAIKKDDFITEYVGVCVKRKYLDDLFARYKSERM----LYIMALDHNIYIDARKRGGIARYINHSCDPNCVVHRWRVQGVIRAAIFALRDIQPGEELSFDYQWERKRGRALTRCYCKSATCRGTLELSKVTTLEEEEWELKLS-----GHWVKPKSFTAGH--EIVNRCIKIYFQGNHEYFVGEVSQYDDGNKKHLIVY 688
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A485LGP0_9STRA (Aste57867_20880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGP0_9STRA) HSP 1 Score: 176 bits (447), Expect = 4.140e-43 Identity = 114/317 (35.96%), Postives = 157/317 (49.53%), Query Frame = 2
Query: 431 QNFELIKSNIRAVSRLRRKGVTPPRNTSPVRKGDISDYDSDDEMAQCQCRPDSPGGRTCHDNSCINYATNTECPKGHCNPG--CCNQNLQL-RRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYR--YYAATVGEYNPETGKHVVLYDGED 1366
+ FELI+ ++ + P+ K SD + C C P + CH CINYAT ECP C G C NQ LQ + +LE T KG+G+R +PV + + EYVGEIID EL RR + G+ S Y +QL Y+DA+ RGG RF+NHSC P C+ E+W G VFA RD+A G E++FDYQW T GR++ KC C TC+G + DE++ G F+ P +D + QL GR++R++ + V YNP+T +H V D +D
Sbjct: 15 RGFELIERSV---------------HVPPLTKPPCSDAEP------CFCSPSADEVDACHTTECINYATYVECPLDRCATGNQCRNQRLQRPEEFPRLEPFLT--EMKGYGVRTCDPVPALSPVGEYVGEIIDQRELYRRTSALGRHESNFYYIQLTPGVYIDARNRGGFTRFVNHSCNPNCKAEKWTVGGETRLLVFALRDLAPGIEITFDYQW-TVLGRQRIKCFCGEETCKGFIG-DEVEGKTLE---------APQGIFKDPEDDDGVKD-QLVGRKLRLFQSHSENAAFSVVRVTRYNPDTDEHTVADDTDD 296
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A2D4BU95_PYTIN (CMGC/CDK protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU95_PYTIN) HSP 1 Score: 171 bits (434), Expect = 1.890e-41 Identity = 109/321 (33.96%), Postives = 157/321 (48.91%), Query Frame = 2
Query: 422 EPWQNFELIKSNIRAVSRLRRKGVTPPRNTSPVRKGDISDYDSDDEMAQCQC---RPDSPGG-RTCHDNSCINYATNTECPKGHCNPG--CCNQNLQL-RRYAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIYWDGDYR--YYAATVGEYNPETGKHVVLYD 1357
E +N L+ N ++ L R+ + P DD A C C RP+ P C D SCIN+AT EC C+ G C NQ LQ R+ +LE T KG+G+R + + +G + EYVGEIID EL RR+ + + Y + L Y+DA+ +G RF+NHSCEP C+ E+W AV A RD+ A EEL+FDYQW G K KC C +A C+G + + +N + G+FR P E++ + + GRR+R++W + Y ATV + E + + Y+
Sbjct: 26 EAVRNITLLTRNEYPLAHLPREKLFKP----------------DDAHAVCFCTFPRPEEPEPIARCDDVSCINFATYIECSPSRCDAGKYCQNQRLQHPERFPRLEAFKTQH--KGYGVRARDAIAQGTVIGEYVGEIIDQRELTRRLNTVPRNELNFYYLALEPGVYIDARNKGSFTRFMNHSCEPNCKTEKWTVEGETRIAVLAVRDIGAREELTFDYQWKA-LGSKSIKCFCESANCKGVIGAEATNNALDCEDE-------AQGFFREPTKEEIG--SAIVGRRIRLFWSPEDTSLYSCATVRRFVEEDNTYELEYE 318
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Match: A0A397G474_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397G474_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.910e-41 Identity = 101/272 (37.13%), Postives = 137/272 (50.37%), Query Frame = 2
Query: 557 EMAQCQCRPDSPGGRTCHDNSCINYATNTECPKGHC--NPGCCNQNLQLRR-YAKLEVAHTGSAAKGHGLRLLEPVREGAFLIEYVGEIIDAEELDRRMQSDGQGASRLYMMQLAHNQYLDAKRRGGIARFINHSCEPACRLERWRAGPHLCCAVFADRDMAAGEELSFDYQWSTHKGRKKTKCLCAAATCRGTLEVDELDNXXXXXXXXXXXXXGSMGYFRMPRAEDVAEPTQLQGRRVRIY----WDGDYRYYAATVGEYNPETGKHVVL 1351
E C C CHD CINYAT ECP C GC NQ LQ + LE T KG+G+R E VR + EYVGEII +EL RR G+ + Y +Q+++ Y+DA+ RGG RF+NHSC P C+ E+W G VFA R++A G+E++FDYQW T GR++ KC C + C+G + D N G F+ P D + L GR +R++ DG + + V Y+P T +H V+
Sbjct: 41 EAEPCFCSSTDSSEVACHDTECINYATYVECPLDRCPTGRGCRNQRLQRPDLFPHLEPFQT--EFKGYGVRTTERVRALDPVGEYVGEIIGQKELLRRTNGLGRMETNFYYIQMSNGVYIDARHRGGFTRFVNHSCNPNCKAEKWTVGGETRLLVFALRELAPGDEITFDYQW-TLLGRQRIKCFCGESVCKGFIGGDVEKNPTDTPD----------GVFQDPTDADTVDE-YLVGRTLRLFNPSSGDGSHSFSIVLVKSYDPNTREHTVV 298 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig879.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig879.4.1 >prot_P-wetherbeei_contig879.4.1 ID=prot_P-wetherbeei_contig879.4.1|Name=mRNA_P-wetherbeei_contig879.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=526bp MSLGDNGARGADDSEKEEFESAARPLRTTGATLVVKRAEGGPTSATAGDEback to top mRNA from alignment at P-wetherbeei_contig879:5226..8306+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig879.4.1 ID=mRNA_P-wetherbeei_contig879.4.1|Name=mRNA_P-wetherbeei_contig879.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3081bp|location=Sequence derived from alignment at P-wetherbeei_contig879:5226..8306+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig879:5226..8306+ >mRNA_P-wetherbeei_contig879.4.1 ID=mRNA_P-wetherbeei_contig879.4.1|Name=mRNA_P-wetherbeei_contig879.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1578bp|location=Sequence derived from alignment at P-wetherbeei_contig879:5226..8306+ (Phaeothamnion wetherbeei SAG_119_79)back to top |