mRNA_P-wetherbeei_contig877.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig877.5.1
Unique NamemRNA_P-wetherbeei_contig877.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 4.130e-126
Identity = 234/399 (58.65%), Postives = 268/399 (67.17%), Query Frame = 3
Query:  438 DTIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQGSXXXXXXXXXPKAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDAS-DARGDAVAAAVRGLWPAD 1631
            DTIFALS+G +G AGVAVIR+SGP A DAL  L T              P     +P  RRA VRRL+DP   +LLDEALVLWMP PRSFTGEDT ELHTHGSRAVV GVL ALG + G                        +RPAERGEFTQRAYGNGRMDLT VEGLADL+AADTA QRRQALRQMGGAL  +Y +WR  LT+CLAHTEAVIDFGDDEDD VD  A+AA+RP++  LI ++  HL D RRGEIVR+G+RVAI GPPNAGKSSLLN+LA RPAAIVS  AGTTRDVV+++LD+AG PVV+SDTAGLR   AA                            D VE EG+RRAR A  ++QL +FV D+S +A G   AAA++ L   D
Sbjct:    4 DTIFALSSGPAGQAGVAVIRVSGPAAGDALHTLIT-------------APGRHAKMPEARRAAVRRLYDPVKGDLLDEALVLWMPGPRSFTGEDTTELHTHGSRAVVGGVLGALGTIPG------------------------LRPAERGEFTQRAYGNGRMDLTEVEGLADLIAADTAEQRRQALRQMGGALKDKYESWREELTKCLAHTEAVIDFGDDEDD-VDEGAYAAIRPKVSGLIQELRVHLADNRRGEIVRNGVRVAIAGPPNAGKSSLLNVLAERPAAIVSPIAGTTRDVVQLQLDIAGLPVVLSDTAGLRAAEAAA---------------------------DDVEREGIRRAREAVVDSQLTIFVWDSSNEAEG---AAALKDLQATD 334          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 1.830e-116
Identity = 224/417 (53.72%), Postives = 269/417 (64.51%), Query Frame = 3
Query:  402 NPQPARLPKRERDTIFALSTGSSGAAGVAVIRISGPRASDALEALT--------TPPQGSXXXXXXXXXP-------------KAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDASDARG 1589
            +P P+       DTIFAL+TG++G AGVAV+RISGP ++  L+ALT        T  + S        X              +  P  PA RRAVVRRL+DP + +LLDEALVLWMP PRSFTGEDTVELHTHGSRAV+ GVLDAL  +                  G+++    +R AERGEFTQRAYGNGRMDLT VEGLADL+AADTAAQR+QAL+QMGGAL   Y  WR  L  CLAH EAVIDFGDDE+D     A++A+ P++  L ++++ HL DG RGEIVR G+RVAIVGPPNAGKSSLLNLLAARPAAIVS  AGTTRDVVEV++D+AG PV +SDTAGLR  +                              D +E EGMRRAR+A   A L +FV+DA++  G
Sbjct:   20 SPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATTLSSATAAEASAGRDAGVAXXXXXXXXXXXXXAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAAM------------------GAASGLRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLVAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFSAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREAT-----------------------------DDEIEREGMRRARSAVDNAHLAIFVVDATNTDG 389          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 2.330e-116
Identity = 245/483 (50.72%), Postives = 297/483 (61.49%), Query Frame = 3
Query:  402 NPQPARLPKRERDTIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQ-----------GSXXXXXXXXXP---------KAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDASDARGDAVAAAVRGLW-----PADGDAGAASGSSDGGTAARDGVSIGVGDDESPPLFVATENVLVVANKVDL 1775
            +P P+       DTIFAL+TG++G AGVAV+RISGP ++  L+ALT+              G          P         +  P  PA RRAVVRRL+DP + +LLDEALVLWMP PRSFTGEDTVELHTHGSRAV+ GVLDAL  +                  G+++    +R AERGEFTQRAYGNGRMDLT VEGLADL+AADTAAQR+QAL+QMGGAL   Y  WR  L  CLAH EAVIDFGDDE+D     A+AA+ P++  L ++++ HL DG RGEIVR G+RVAIVGPPNAGKSSLLNLLAARPAAIVS  AGTTRDVVEV++D+AG PV +SDTAGL           P   D                  D +E EGMRRAR+A   A L +FV+DA++  G   A A+ G        A+ +A A +   D   A  +GV    G   S     A ++++VVANK DL
Sbjct:  184 SPLPSASSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAANLSSVTAAEASAGGDAGVAASAAPAVVNGGGAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGM------------------GAASGMRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGL-----------PKATD------------------DEIEREGMRRARSAVDNAHLAIFVVDATNTDG---ATALLGKLREEAKEAEAEAAATAAQRDD-AAEMEGV---FGSGSSGGGSAALDDLIVVANKADL 612          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: A0A7S3H4J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4J6_9STRA)

HSP 1 Score: 316 bits (809), Expect = 5.100e-99
Identity = 189/368 (51.36%), Postives = 234/368 (63.59%), Query Frame = 3
Query:  438 DTIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQGSXXXXXXXXXPKAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDD--EDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAA 1535
            DTIFALS+G    +GVAV+RISGP +   LE L   P  S             P  P PR A ++ L+ P + ++LD++L+LW P PRSFTGED VELH HGSRAV+ GV +AL +L  P                   SG  +RPA  GEFT+RA+ NG+MDLT VEGL+DLL A+T+ QR+QAL+QM G L  +Y AWR  L  CLAHTEAVIDFGDD  EDD  D+ A  AL+P++ +L+S+++ HL DGRRGE+VR+GI +A+ GPPNAGKSSL+N LA RPAAIVS  AGTTRD+VEVRL+LAG P ++SDTAGLR  S                              D +E EGMRRAR A
Sbjct:   58 DTIFALSSGPIAKSGVAVVRISGPSSLYCLERLAVKPGAS-----------TSPFAPKPREATLKALYSPVTDDVLDQSLILWFPGPRSFTGEDVVELHVHGSRAVIKGVFEALEHLDDPL------------------SGRAIRPAAPGEFTRRAFDNGKMDLTEVEGLSDLLDAETSEQRKQALKQMEGHLRKQYEAWRDVLMSCLAHTEAVIDFGDDDREDDVSDA-ALHALQPRVRTLLSELQRHLQDGRRGELVREGIHIALAGPPNAGKSSLMNALARRPAAIVSPIAGTTRDIVEVRLELAGVPCIVSDTAGLREHSQ-----------------------------DVIELEGMRRAREA 366          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: A0A4D9CTT5_9STRA (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.380e-98
Identity = 192/340 (56.47%), Postives = 227/340 (66.76%), Query Frame = 3
Query:  606 PAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDASDARGDAVAAAVRGLWP 1625
            PAPR A +R+L+ P   E LD+A+VLW+P PRSFTGEDTVELH HGSRAVV GV +AL  L     GG                   +R AE GEFT+RA+ NGRMDLT VEGLADL+AADTAAQR+QAL+QMGGAL   Y  WR  L  CLAHTEAVIDFGDDE D VD  A+ A+RP++  L  +M  HL DG RGE++R GIRVAIVGPPNAGKS++LN LA RPAAIVS AAGTTRDVVEV+LD+ G PV++SDTAG+R E+A                             DPVE EG+RRAR AA  AQL + VLDA++  G    A++ G+ P
Sbjct:   13 PAPRMASLRKLYSPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLAL---DKGGKAR----------------VRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELD-VDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIR-EAAR----------------------------DPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGREAFASLAGVGP 303          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: A0A8J5XZ82_DIALT (TrmE-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ82_DIALT)

HSP 1 Score: 311 bits (796), Expect = 1.410e-94
Identity = 224/455 (49.23%), Postives = 266/455 (58.46%), Query Frame = 3
Query:  435 RDTIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQGSXXXXXXXXXPKAKPSLP--APRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDASDA---RGDAVAAAVRGLWPADGDAGAASGSSDGGTAARDGVSIGVGDD--ESPPLFVATENVLVVANKVDLL 1778
            RDTIFA+S+G+   AGVAVIRISG  A  AL+ +    +G           +  PSL   APR A + +L  P S E LD ALVLW PAPRSFTGED  ELH HG RAVVA VL ALG L G  L                        AERGEFT+RA+GNGRMDLT VEGL+DLLAA+T AQRRQAL QMGGA  AR+  WRA +  CLAHTEAVIDFG+D DD + SD    + P++  L +QM   L D RRGE++RDG RV IVG PNAGKSSLLN LA RPAAIV+  AGTTRDV+E+ L L GFP+ + DTAGLR    A                            D +E EGMRRARA  A+A + L V D S       + +AA +RG   AD  AG ASG++           +G GD+   +  L +   ++LVV NKVD L
Sbjct:   66 RDTIFAVSSGAGVRAGVAVIRISGAGARIALQTMIA--RG-----------RLDPSLAWLAPRMATLAKLLAPGSDERLDSALVLWFPAPRSFTGEDVAELHVHGGRAVVAAVLAALGALPGHRL------------------------AERGEFTRRAFGNGRMDLTEVEGLSDLLAANTDAQRRQALAQMGGAARARFDGWRAQILDCLAHTEAVIDFGEDADD-LGSDVLRVVSPRVAELAAQMTRALADARRGELLRDGPRVVIVGAPNAGKSSLLNRLAQRPAAIVTPIAGTTRDVLELELQLGGFPLRLCDTAGLRPRDEA----------------------------DEIEVEGMRRARALLADAPMRLVVADVSAGVPPSREELAALLRGEEGADA-AGEASGAA-----------LGDGDEGANAAALDLDDSSLLVVLNKVDAL 442          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: A0A2V3IXG2_9FLOR (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG2_9FLOR)

HSP 1 Score: 308 bits (789), Expect = 2.110e-93
Identity = 189/381 (49.61%), Postives = 235/381 (61.68%), Query Frame = 3
Query:  438 DTIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQGSXXXXXXXXXPKAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDASD 1580
            DTIFALS+G+   AGVAVIR+SGP A+D L  ++ P                +  LP PR A +R+L+ P S ELLDEALVL+ P P SFTGED VEL  HGSRAV++ V++AL +   P                       +RPAERGEFT+RA+ NGR+DLTAVEGLADL+AA+TA QR+QAL  + G +      WR  +  CLAH EAVIDFGDD DD V  D    + P++++L +Q++ HL+D  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVS  AGTTRDVVEV+LDL G  VV+SDTAGLR  +                              DP+E EG+RRAR AAA A + + V D ++
Sbjct:   80 DTIFALSSGAGVTAGVAVIRVSGPHAADCLLKISAP--------------STRQKLPRPRYAALRKLYHPLSEELLDEALVLFFPGPNSFTGEDVVELQVHGSRAVISAVVNALADCTDPDT--------------------MIRPAERGEFTRRAFENGRLDLTAVEGLADLIAAETAMQRKQALWHLSGHVKETLEEWRTEIKTCLAHVEAVIDFGDDVDDQVFED----IIPRVQALRAQIKAHLDDAHRGEIIRGGARVAIVGKPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVVVSDTAGLRDST-----------------------------NDPIEIEGIRRAREAAARADITVLVHDVTE 393          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: UPI0004916D26 (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004916D26)

HSP 1 Score: 301 bits (772), Expect = 2.000e-92
Identity = 194/380 (51.05%), Postives = 232/380 (61.05%), Query Frame = 3
Query:  438 DTIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQGSXXXXXXXXXPKAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDAS 1577
            DTIFAL+T + G AGVAV+R+SGP A  ALEAL   P+                  P+PR A +RRL DP SAE+LD+ALVLW P PRS+TGED  ELH HG RAV A VLDALG   G                        +RPAE G+FT+RA+ NG+MDLTA EGL DL+ A+T+AQRRQALRQM G L   Y  WR  L R LAH EA IDF D++  A  +DA   +RP++  LI  +  HL+DG RGE +R+G+ VAIVG PNAGKSSLLN LA R AAIVS  AGTTRDV+EV LD+ GFPVV++DTAGLR E+A                             D +E EG+RRA A AA A L + V DA+
Sbjct:    3 DTIFALAT-APGRAGVAVVRVSGPAAGGALEALAGTPR------------------PSPRVATLRRLRDPASAEVLDDALVLWFPGPRSYTGEDVAELHLHGGRAVTAAVLDALGRCPG------------------------LRPAEPGDFTRRAFANGKMDLTAAEGLIDLIDAETSAQRRQALRQMEGELGRLYEGWRTRLIRALAHMEADIDFPDEDLPAGVADA---VRPEITDLIRAIGAHLSDGHRGERLREGLHVAIVGAPNAGKSSLLNALARRDAAIVSERAGTTRDVIEVHLDVGGFPVVLADTAGLR-ETA-----------------------------DTIEEEGVRRALARAASADLKIAVFDAA 306          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: A0A154WH81_9PROT (tRNA modification GTPase MnmE n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154WH81_9PROT)

HSP 1 Score: 300 bits (767), Expect = 8.690e-92
Identity = 190/379 (50.13%), Postives = 232/379 (61.21%), Query Frame = 3
Query:  441 TIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQGSXXXXXXXXXPKAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDAS 1577
            TIFAL++G+ G +G+AVIRISGP A  AL ALT                  +  LP PR+A +R L  P S E+LD AL LW PAP SFTGED VELH HG RAV+AGV++AL  L  P L                      R AE GEFT+RA+  G++DLT VEGLADL+ A+T AQRRQALRQM GALS  Y  WR  L RCLAHTEA IDF D+E   + +D   A++ +++ L  +M+ HL DGRRGE++R+G R+AI+GPPNAGKSSLLN LA R AAIVS  AGTTRDV+E  LDL G+ V+++DTAGLR                                +D +E EG+RRAR  AA A L L VLDA+
Sbjct:    5 TIFALASGA-GRSGIAVIRISGPLARQALSALT------------------RRELPPPRQASLRLLAMPESGEMLDHALTLWFPAPHSFTGEDVVELHLHGGRAVIAGVIEALSAL--PDL----------------------RLAEPGEFTRRAFLAGKLDLTEVEGLADLIDAETTAQRRQALRQMDGALSGLYEDWRTRLIRCLAHTEAAIDFADEE---LPADMMLAIQAEVQGLRQEMQAHLADGRRGEMLREGFRIAIIGPPNAGKSSLLNWLAQRDAAIVSEIAGTTRDVIEAHLDLGGYSVLLADTAGLRET------------------------------VDGIEAEGIRRARNWAAAADLQLLVLDAT 307          
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Match: A0A0G4EE61_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EE61_VITBC)

HSP 1 Score: 302 bits (773), Expect = 2.300e-90
Identity = 200/399 (50.13%), Postives = 248/399 (62.16%), Query Frame = 3
Query:  438 DTIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQG---SXXXXXXXXXPKAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGEDTVELHTHGSRAVVAGVLDALGNLFGPTLGGGV-----YDGFGSGSSGSSTSGGYMRPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALSARYGAWRAALTRCLAHTEAVIDFGDDE--DDAVDSDAWAALRPQMESLISQMEDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGTTRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVGGGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLD----ASDARGD 1592
            DTI+ALS+GS G AGVAVIRISGP +   L+ LTT P     S            +P LP PR+AV+RR++DP   ELLD+ LV+W P+P SFTG+DTVELH HGSRAV+ GV +A   L    + G       +DG              +RPAERGE+T+RA+ NGR+DL  VEGLADL+AADT++QR+QA+RQM G LSA Y  WR  LT  LA  EA IDFGDD+  +D  +           ++L+  ME  L D RRGEIVR G+RV + GPPNAGKSSLLN LA RPAAIVS+  GTTRD++EV +DL+G PV+++DTAG+R E   V     G  D R A             +DPVE EGMRR+  A    Q+ + VLD    AS A GD
Sbjct:   78 DTIYALSSGS-GKAGVAVIRISGPLSPLILQLLTTDPSTRPCSSSSSNAIPYHGLRP-LPPPRQAVLRRIYDPLVGELLDQGLVMWFPSPHSFTGDDTVELHLHGSRAVIEGVFEAFRRLQNALVEGWGEVRVRFDG--------------LRPAERGEYTRRAFENGRLDLMEVEGLADLIAADTSSQRQQAIRQMRGGLSAVYERWRHELTSALAWLEAAIDFGDDDVQNDVEEQRTMXXXXXXXDALVESMERALKDNRRGEIVRSGVRVGLFGPPNAGKSSLLNALARRPAAIVSSTPGTTRDLIEVPIDLSGVPVIVTDTAGIR-EGGPVN--DHGDGDERAA-------------VDPVEVEGMRRSWKALKGCQIGVLVLDLSVRASGAPGD 444          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig877.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CK05_9STRA4.130e-12658.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K111_9PHAE1.830e-11653.72TrmE-type G domain-containing protein n=1 Tax=Ecto... [more]
D8LG51_ECTSI2.330e-11650.72TrmE, organellal GTPase involved in tRNA modificat... [more]
A0A7S3H4J6_9STRA5.100e-9951.36Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9CTT5_9STRA1.380e-9856.47TrmE-type G domain-containing protein n=4 Tax=Mono... [more]
A0A8J5XZ82_DIALT1.410e-9449.23TrmE-type G domain-containing protein n=1 Tax=Diac... [more]
A0A2V3IXG2_9FLOR2.110e-9349.61tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
UPI0004916D262.000e-9251.05tRNA uridine-5-carboxymethylaminomethyl(34) synthe... [more]
A0A154WH81_9PROT8.690e-9250.13tRNA modification GTPase MnmE n=1 Tax=Oceanibaculu... [more]
A0A0G4EE61_VITBC2.300e-9050.13Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig877contigP-wetherbeei_contig877:4438..6438 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LG51
Preferred nameGTPBP3
PFAMsMMR_HSR1,MnmE_helical,TrmE_N
Model size1891
Max annot lvl2759|Eukaryota
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03650,ko:K10769
KEGG ReactionR08701
Hectar predicted targeting categorychloroplast
GOsGO:0000166,GO:0000959,GO:0000963,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0007275,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009790,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032543,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048513,GO:0048568,GO:0048731,GO:0048856,GO:0070525,GO:0070899,GO:0070900,GO:0071704,GO:0090304,GO:0090646,GO:0097159,GO:0097367,GO:0140053,GO:1900864,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons2
Evalue1.16e-117
EggNOG OGsCOG0486@1|root,KOG1191@2759|Eukaryota
DescriptionGTP binding
Cds size1770
COG categoryD
BRITEko00000,ko01000,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187059.0689018-UTR-P-wetherbeei_contig877:4437..44391683187059.0689018-UTR-P-wetherbeei_contig877:4437..4439Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig877 4438..4439 -
1683187059.1046705-UTR-P-wetherbeei_contig877:6319..64381683187059.1046705-UTR-P-wetherbeei_contig877:6319..6438Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig877 6320..6438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187059.0787482-CDS-P-wetherbeei_contig877:4439..45071683187059.0787482-CDS-P-wetherbeei_contig877:4439..4507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig877 4440..4507 -
1683187059.090254-CDS-P-wetherbeei_contig877:4617..63191683187059.090254-CDS-P-wetherbeei_contig877:4617..6319Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig877 4618..6319 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig877.5.1prot_P-wetherbeei_contig877.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig877 4440..6319 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig877.5.1

>prot_P-wetherbeei_contig877.5.1 ID=prot_P-wetherbeei_contig877.5.1|Name=mRNA_P-wetherbeei_contig877.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=590bp
MVNAAPMAFVFGLAHAFDPNNVCRTCAWLRSSRPGHQVTRNPSSVTRRGW
RSAPAADLARKRRCSAAGNMQSSLHQSADTVSEVGGAAAWKEHVNPQPAR
LPKRERDTIFALSTGSSGAAGVAVIRISGPRASDALEALTTPPQGSAAAA
AAAAAPKAKPSLPAPRRAVVRRLWDPRSAELLDEALVLWMPAPRSFTGED
TVELHTHGSRAVVAGVLDALGNLFGPTLGGGVYDGFGSGSSGSSTSGGYM
RPAERGEFTQRAYGNGRMDLTAVEGLADLLAADTAAQRRQALRQMGGALS
ARYGAWRAALTRCLAHTEAVIDFGDDEDDAVDSDAWAALRPQMESLISQM
EDHLNDGRRGEIVRDGIRVAIVGPPNAGKSSLLNLLAARPAAIVSAAAGT
TRDVVEVRLDLAGFPVVISDTAGLRGESAAVAAVTPGTADGRTAGPGAVG
GGEGGSGIDPVEWEGMRRARAAAAEAQLVLFVLDASDARGDAVAAAVRGL
WPADGDAGAASGSSDGGTAARDGVSIGVGDDESPPLFVATENVLVVANKV
DLLGNGGRSAAADAARAGRLCAHRPSRGGGRAALRNRHQ*
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mRNA from alignment at P-wetherbeei_contig877:4438..6438-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig877.5.1 ID=mRNA_P-wetherbeei_contig877.5.1|Name=mRNA_P-wetherbeei_contig877.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2001bp|location=Sequence derived from alignment at P-wetherbeei_contig877:4438..6438- (Phaeothamnion wetherbeei SAG_119_79)
TGCCAAATGCGTGCCACGGTGCTGCAGTGAAATCCCTTTTAGAGCTTCGC CGTCCGGCTGGCATAAGGTTTTCCCGAGAACTTGTGTAAGGTCAGTAAGT TCCACTTCTGCTCTTGCCCATGGTGAACGCGGCGCCCATGGCGTTCGTGT TCGGCCTGGCGCACGCATTCGATCCGAATAACGTTTGTCGGACATGCGCG TGGCTGCGCTCGTCGCGCCCGGGGCACCAGGTCACGAGAAATCCCTCTTC GGTCACTCGACGCGGATGGCGCTCAGCTCCGGCGGCCGACCTTGCGAGAA AGAGAAGATGCAGCGCTGCAGGAAATATGCAGAGCAGCCTCCATCAGTCG GCGGATACAGTGTCGGAGGTGGGAGGAGCCGCGGCGTGGAAGGAGCACGT AAACCCACAGCCTGCGCGCTTGCCAAAACGGGAACGTGACACCATTTTTG CGCTATCTACGGGGAGTAGCGGAGCAGCCGGAGTCGCCGTCATCCGAATC TCGGGCCCGCGAGCCTCTGACGCGCTCGAAGCGCTCACGACGCCGCCACA AGGATCCGCCGCTGCAGCTGCGGCTGCTGCTGCACCAAAAGCAAAGCCCA GCCTCCCGGCGCCGCGGCGCGCCGTCGTGCGCCGCCTCTGGGACCCTCGC TCGGCGGAGCTTCTCGACGAGGCGCTGGTGCTGTGGATGCCGGCGCCGCG CAGCTTCACGGGGGAGGACACGGTCGAGCTCCACACCCACGGCAGCCGCG CCGTCGTTGCCGGCGTCCTTGACGCCCTCGGCAACCTGTTCGGCCCGACC CTTGGCGGCGGAGTTTACGACGGTTTTGGCTCCGGTTCCAGTGGCAGTTC CACTAGCGGCGGATACATGCGACCCGCCGAGCGCGGCGAGTTCACCCAGC GCGCCTACGGCAACGGTCGCATGGACCTGACGGCGGTTGAGGGGCTTGCC GACCTCCTGGCCGCCGACACCGCCGCCCAGCGGCGGCAGGCGCTGCGGCA GATGGGCGGCGCGCTCTCCGCACGCTACGGCGCCTGGCGCGCCGCGCTGA CACGCTGCCTCGCGCACACGGAGGCCGTCATCGATTTCGGCGACGACGAG GATGACGCCGTCGACAGCGACGCCTGGGCCGCCCTTCGCCCGCAGATGGA ATCATTGATATCCCAGATGGAGGACCATTTAAACGACGGCCGGCGCGGCG AGATCGTCCGGGACGGCATCCGCGTTGCCATCGTTGGTCCGCCCAACGCT GGCAAGTCCTCGCTGCTCAATTTGCTGGCGGCGCGGCCCGCGGCGATCGT CAGCGCCGCCGCCGGCACGACGCGCGACGTGGTGGAAGTGCGTCTAGACC TGGCGGGCTTCCCCGTCGTCATCAGCGACACCGCGGGGCTGCGCGGCGAA AGCGCTGCCGTCGCCGCCGTAACTCCCGGAACCGCCGACGGCAGAACTGC TGGGCCAGGAGCTGTTGGCGGAGGAGAAGGCGGCAGCGGCATTGATCCGG TGGAGTGGGAAGGCATGCGACGCGCCCGGGCCGCCGCTGCGGAGGCGCAG CTGGTCTTGTTCGTTCTGGACGCCAGCGATGCCCGGGGCGACGCCGTCGC GGCGGCGGTTCGCGGGCTCTGGCCGGCGGACGGCGACGCCGGCGCTGCCA GTGGGAGCAGCGACGGCGGGACTGCAGCTCGTGACGGCGTCAGCATCGGC GTCGGCGATGACGAATCGCCGCCGTTGTTTGTCGCAACGGAGAATGTGCT GGTGGTGGCCAACAAGGTGGATCTGCTGGGCAACGGCGGGCGCAGTGCCG CCGCCGACGCTGCGCGGGCAGCTGTCGCCGCAGCGGGCGCCGCCGCTACC GCGGCCGCGGGAACAGCGGCCGCGGCGACGCCGTTGCTGGACGGCGTCGG GATCTGGCCAGTCTCATGCCGGACCGGCGACGGCGCCTGTGCGCTCATCG CCCATCTCGAGGCGGAGGTCGGGCGGCGCTTCGAAACCGCCATCAGTAGC A
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Coding sequence (CDS) from alignment at P-wetherbeei_contig877:4438..6438-

>mRNA_P-wetherbeei_contig877.5.1 ID=mRNA_P-wetherbeei_contig877.5.1|Name=mRNA_P-wetherbeei_contig877.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1770bp|location=Sequence derived from alignment at P-wetherbeei_contig877:4438..6438- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGAACGCGGCGCCCATGGCGTTCGTGTTCGGCCTGGCGCACGCATT
CGATCCGAATAACGTTTGTCGGACATGCGCGTGGCTGCGCTCGTCGCGCC
CGGGGCACCAGGTCACGAGAAATCCCTCTTCGGTCACTCGACGCGGATGG
CGCTCAGCTCCGGCGGCCGACCTTGCGAGAAAGAGAAGATGCAGCGCTGC
AGGAAATATGCAGAGCAGCCTCCATCAGTCGGCGGATACAGTGTCGGAGG
TGGGAGGAGCCGCGGCGTGGAAGGAGCACGTAAACCCACAGCCTGCGCGC
TTGCCAAAACGGGAACGTGACACCATTTTTGCGCTATCTACGGGGAGTAG
CGGAGCAGCCGGAGTCGCCGTCATCCGAATCTCGGGCCCGCGAGCCTCTG
ACGCGCTCGAAGCGCTCACGACGCCGCCACAAGGATCCGCCGCTGCAGCT
GCGGCTGCTGCTGCACCAAAAGCAAAGCCCAGCCTCCCGGCGCCGCGGCG
CGCCGTCGTGCGCCGCCTCTGGGACCCTCGCTCGGCGGAGCTTCTCGACG
AGGCGCTGGTGCTGTGGATGCCGGCGCCGCGCAGCTTCACGGGGGAGGAC
ACGGTCGAGCTCCACACCCACGGCAGCCGCGCCGTCGTTGCCGGCGTCCT
TGACGCCCTCGGCAACCTGTTCGGCCCGACCCTTGGCGGCGGAGTTTACG
ACGGTTTTGGCTCCGGTTCCAGTGGCAGTTCCACTAGCGGCGGATACATG
CGACCCGCCGAGCGCGGCGAGTTCACCCAGCGCGCCTACGGCAACGGTCG
CATGGACCTGACGGCGGTTGAGGGGCTTGCCGACCTCCTGGCCGCCGACA
CCGCCGCCCAGCGGCGGCAGGCGCTGCGGCAGATGGGCGGCGCGCTCTCC
GCACGCTACGGCGCCTGGCGCGCCGCGCTGACACGCTGCCTCGCGCACAC
GGAGGCCGTCATCGATTTCGGCGACGACGAGGATGACGCCGTCGACAGCG
ACGCCTGGGCCGCCCTTCGCCCGCAGATGGAATCATTGATATCCCAGATG
GAGGACCATTTAAACGACGGCCGGCGCGGCGAGATCGTCCGGGACGGCAT
CCGCGTTGCCATCGTTGGTCCGCCCAACGCTGGCAAGTCCTCGCTGCTCA
ATTTGCTGGCGGCGCGGCCCGCGGCGATCGTCAGCGCCGCCGCCGGCACG
ACGCGCGACGTGGTGGAAGTGCGTCTAGACCTGGCGGGCTTCCCCGTCGT
CATCAGCGACACCGCGGGGCTGCGCGGCGAAAGCGCTGCCGTCGCCGCCG
TAACTCCCGGAACCGCCGACGGCAGAACTGCTGGGCCAGGAGCTGTTGGC
GGAGGAGAAGGCGGCAGCGGCATTGATCCGGTGGAGTGGGAAGGCATGCG
ACGCGCCCGGGCCGCCGCTGCGGAGGCGCAGCTGGTCTTGTTCGTTCTGG
ACGCCAGCGATGCCCGGGGCGACGCCGTCGCGGCGGCGGTTCGCGGGCTC
TGGCCGGCGGACGGCGACGCCGGCGCTGCCAGTGGGAGCAGCGACGGCGG
GACTGCAGCTCGTGACGGCGTCAGCATCGGCGTCGGCGATGACGAATCGC
CGCCGTTGTTTGTCGCAACGGAGAATGTGCTGGTGGTGGCCAACAAGGTG
GATCTGCTGGGCAACGGCGGGCGCAGTGCCGCCGCCGACGCTGCGCGGGC
AGGGCGCCTGTGCGCTCATCGCCCATCTCGAGGCGGAGGTCGGGCGGCGC
TTCGAAACCGCCATCAGTAG
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