mRNA_P-wetherbeei_contig876.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig876.4.1
Unique NamemRNA_P-wetherbeei_contig876.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A352KAN0_9PROT (PleD family two-component system response regulator n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KAN0_9PROT)

HSP 1 Score: 629 bits (1623), Expect = 2.960e-223
Identity = 319/453 (70.42%), Postives = 370/453 (81.68%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQPGWDDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIGGVDPVSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTE 1359
            MTARVLVVDDV ANVKLLEAKLSAEYYEVLTA NGQQAIEVA  EMPDIIL+DVMMP+MDGFTACR +K+N  LRHIPV+M+TALDQ SDRVQGL++GADDFISKPIKN PLFPRVRSL+RLKMMTDELRARE TG+NLGLID P WDDE  APG+IL++DDQPRS+ R+ ETL E  H   +  D   AL LA+   +DLII SLSL  YD LR CSQ RT EETRT PLLIIVEDPE   L RGLDMGVNDYLVRPIE NE++ARV+TQLRWRRY E+LR+N   S+++AITD +T L NRRYMETHL  L  R+ +E RP++++M+DID FKQ+ND  GHDAGD++L QFA GISRN+RGIDLACRYGGEEFVVIMPETD AIA +VAERIR+YTE +AF++   + +++TTSIGV +  + +      LKRAD ALY+AK  GRNRV E
Sbjct:    1 MTARVLVVDDVAANVKLLEAKLSAEYYEVLTAENGQQAIEVAAKEMPDIILMDVMMPVMDGFTACREIKKNPTLRHIPVVMITALDQASDRVQGLEAGADDFISKPIKNIPLFPRVRSLVRLKMMTDELRAREVTGRNLGLIDYPNWDDELIAPGQILVVDDQPRSAQRVEETLSEAGHRVVVEADAVNALTLARNDNFDLIITSLSLSEYDPLRFCSQMRTGEETRTTPLLIIVEDPETDGLVRGLDMGVNDYLVRPIERNELMARVQTQLRWRRYAEQLRQNVQCSMELAITDPMTQLFNRRYMETHLDGLIARSGQEQRPVAVMMLDIDHFKQVNDTWGHDAGDRVLIQFAKGISRNIRGIDLACRYGGEEFVVIMPETDAAIAGVVAERIREYTENYAFHVSASETIAVTTSIGVASSLEGEAIAMETLKRADQALYQAKKNGRNRVVE 453          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A3C0TTY9_9PROT (PleD family two-component system response regulator (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TTY9_9PROT)

HSP 1 Score: 580 bits (1494), Expect = 9.230e-205
Identity = 292/379 (77.04%), Postives = 332/379 (87.60%), Query Frame = 1
Query:  244 VTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQPGWDDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIGG----VDPVSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTEDLG 1368
            +TALDQPSDRV+GL +GADDFISKPIKNNPLFPRVRSLIRLKMMTDELRARE TG+NLGLIDQP WD+     GRILI+DDQ RSSARI   L E  H      DCA+ALRLAK G +DL+I+SL++RNYDGLRLCSQFRT++ETRTVPLLIIVED ED RLARGLDMGVNDYLVRPIE+NE+IARVRTQLRWR YEE+LR+N HLSLQMA+TDGLTGL+NRRYMETHL+IL DRA+R++RP+SLLMIDID+FK IND++GHD GDKILQQFA GISRN+RGIDLACR+GGEEFVVIMPETDMAIASLVAERIRQ+TET AF+ G       P++MT SIGVT+L   DDTP  +LKRAD ALYRAK++GRNRV+ED+G
Sbjct:    7 ITALDQPSDRVEGLLAGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREVTGKNLGLIDQPEWDEGKQLFGRILIVDDQTRSSARICSILSEAGHSPKAESDCAQALRLAKEGDFDLMIISLTMRNYDGLRLCSQFRTMDETRTVPLLIIVEDTEDSRLARGLDMGVNDYLVRPIENNELIARVRTQLRWRSYEERLRQNLHLSLQMAVTDGLTGLYNRRYMETHLQILMDRAKRDNRPLSLLMIDIDYFKNINDMYGHDVGDKILQQFAQGISRNIRGIDLACRFGGEEFVVIMPETDMAIASLVAERIRQFTETHAFDAGSGSSEATPIAMTASIGVTSLIGGDDTPALMLKRADMALYRAKSDGRNRVSEDVG 385          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A7Y8SXY3_9PROT (PleD family two-component system response regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8SXY3_9PROT)

HSP 1 Score: 527 bits (1358), Expect = 5.800e-183
Identity = 273/458 (59.61%), Postives = 350/458 (76.42%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQPGW--DDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIGGVDP--VSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTED 1362
            MTARVLVVDD+ ANVKLLEAKLSAEY++V+TA NG  A+ +  ++ PD+ILLDVMMP MDGF  CR +K N +  HIP++MVTALDQPSDRV GLQ+GADDF++KP+ +  LF RV+SLIRLKMMTDELR REATGQ+LG++D       D  A  GRIL+++D+   + R+ ETL    +D  I  +  EAL  A+GG +DLIIVSLS++ +DGLR CSQ R+IE TR VP+L+I+E+ +  RLAR L++G NDYL+RP++ NE+IARVRTQLR +RY +KLR NF LSL+MAITD LTGLHNRRYM+ HL  L + A    +P+S L++DID+FK IND +GHD GD++L+QFA  ++ NVRGIDLACRYGGEEFVV+MPETD++ A +VAER+RQ      F I  V P  +++T SIGVT    P +T +++L+RAD ALYRAK +GRNRV  D
Sbjct:    1 MTARVLVVDDIAANVKLLEAKLSAEYFDVITASNGIDALSIVASQSPDLILLDVMMPGMDGFEVCRRIKGNPQSAHIPIVMVTALDQPSDRVTGLQAGADDFLTKPVNDLSLFARVKSLIRLKMMTDELRMREATGQSLGVLDAGDALASDATAPGGRILVVEDRAAQAERLEETLMP-PNDVIIEGNPTEALVRARGGDFDLIIVSLSVQGFDGLRFCSQLRSIEATRYVPVLVIIEEGDTKRLARALELGANDYLMRPVDRNELIARVRTQLRRKRYSDKLRHNFQLSLEMAITDQLTGLHNRRYMQRHLATLLESAAATHKPVSFLILDIDYFKSINDTYGHDVGDQVLKQFAQRVAANVRGIDLACRYGGEEFVVVMPETDLSFAYMVAERLRQQVADMPFAIS-VPPGSINITVSIGVTASEGPQETAEALLRRADQALYRAKRDGRNRVISD 456          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: X5MPF3_9HYPH (Pole remodelling regulatory diguanylate cyclase n=1 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MPF3_9HYPH)

HSP 1 Score: 523 bits (1347), Expect = 2.610e-181
Identity = 272/456 (59.65%), Postives = 341/456 (74.78%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQP-GWDDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIGG-VDPVSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTED 1362
            MTARVLVVDD+PANVKLLEAKL+AEY++V TA NG++A+E A  E PDIILLDVMMP MDGF  CR LK     +H+PVIMVTALDQP+DRV GL++GADDF++KP+ +  L  RVRSL+RLK+MTDELR RE T   LGL+D+       DAA GRIL+++D+  S+ RI E+L+E    + I  D  EAL    G  YDL++VSLSL   DGLR CS  R+ E TR  P+L IVE+ +  RL R LDMGVNDYL+RP++ NE+ ARVRTQL+ +RY++ LR+N  LSL+MAITD LT L+NRRYME+HL  L  RA    + ISLL++DIDFFK +ND HGHD GD +L++F   ++RNVRGIDLACRYGGEEFVV+MP+TD+A A+ VAER+R+     +FN+GG V  + +T SIGVT+L  P ++ D  LKRAD ALYRAK EGRNRV  +
Sbjct:    1 MTARVLVVDDIPANVKLLEAKLTAEYFDVSTAFNGREALEAATTEKPDIILLDVMMPEMDGFEVCRRLKSMPETQHVPVIMVTALDQPADRVTGLEAGADDFLTKPVDDIALMARVRSLVRLKLMTDELRMRETTSNQLGLMDEAEALHRADAAMGRILVVEDRETSARRIAESLREQNRVT-IESDAREALVRVSGEDYDLVVVSLSLERSDGLRFCSHLRSEERTRNTPILAIVENGDTTRLVRALDMGVNDYLMRPVDRNELTARVRTQLKRKRYQDVLRQNLQLSLEMAITDPLTNLYNRRYMESHLSTLVQRAADRGKAISLLIVDIDFFKAVNDTHGHDVGDDVLREFGERLARNVRGIDLACRYGGEEFVVVMPDTDVAFANTVAERLRKGIADESFNVGGGVGALDITASIGVTSLQSPTESVDQFLKRADQALYRAKREGRNRVVSE 455          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A845QBZ8_9HYPH (PleD family two-component system response regulator n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QBZ8_9HYPH)

HSP 1 Score: 516 bits (1328), Expect = 2.000e-178
Identity = 265/456 (58.11%), Postives = 338/456 (74.12%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQP-GWDDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNI-GGVDPVSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTED 1362
            MTARVLVVDD+PANVKLLEAKL+AEY++V TA NG +A+E A +E PDIILLDVMMP MDGF  CR LK     +H+PVIMVTALDQP+DRV GL++GADDF++KP+ +  L  RVRSL+RLK+MTDELR REATG  LGL+D            GR+L+++D+  S+ RI ++L+E    + I  D  EAL    G  +DL++VSLSL   DGLR CS  R+ E TR  P+L IVE+ +  RL R LDMGVNDYL+RP++ NE+ ARVRTQL+ +RY++ LR N  LSL+MAITD LTGL+NRRYME+HL  L  RA    +P+SLL++DIDFFK +ND HGHD GD +L++F + + +NVRGIDLACR+GGEEFVV+MP+TD+A A  VAER+R+      F + GG   + +T SIG+T+L  PD++ D +LKRAD ALYRAK EGRNRV  +
Sbjct:    1 MTARVLVVDDIPANVKLLEAKLTAEYFDVSTATNGLEALEAAVSEKPDIILLDVMMPEMDGFEVCRRLKSQPETQHVPVIMVTALDQPTDRVTGLEAGADDFLTKPVDDIALMARVRSLVRLKLMTDELRLREATGSKLGLMDDAEALHRAGKGMGRVLVVEDRETSARRIADSLRESNRVT-IESDAREALMRVNGEDFDLVVVSLSLERSDGLRFCSHLRSEERTRNTPILSIVENGDTARLVRALDMGVNDYLMRPVDRNELTARVRTQLKRKRYQDLLRENLQLSLEMAITDPLTGLYNRRYMESHLSTLVQRAADRGKPMSLLIMDIDFFKSVNDTHGHDVGDDVLREFGIRLQQNVRGIDLACRFGGEEFVVVMPDTDVAFAHNVAERLRKSIAATPFVVDGGEKSLDITASIGITSLHAPDESVDQLLKRADQALYRAKREGRNRVVSE 455          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A8I1USV5_9PROT (PleD family two-component system response regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1USV5_9PROT)

HSP 1 Score: 515 bits (1326), Expect = 3.880e-178
Identity = 269/456 (58.99%), Postives = 341/456 (74.78%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQPGWDDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIGGVDP--VSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTED 1362
            MTARVLVVDD+ +NVKLLEAKL+AEY+EV+TA NG +AIE      PDIILLDVMMP MDGF ACR +K+N +  H+PV+MVTALDQPSDRV GL +GADDF++KP+ +  LF RVRSL+RLKMMTDELR RE TGQ++GL+D      E+A PGRIL+I+D+P S A  +  L+ G +D    +   EA+   +GG +DLI+VSL +R +DGLRLCSQ R++ + R VP+L++V + E  +L + L+MGVNDYL RP++ NE+IARVRTQLR +RY + LR N  LSL+MAITD LTGLHNRRYME HL  L   A    RP++ L++DID+FK +ND HGHD GD+IL++FA  I  NVRGIDLACRYGGEEFVV+MP+TD++ A  VAER+R+  ET  F I   DP  +S+T SIG+       DT +++L RAD ALYRAK +GRNRV  D
Sbjct:    1 MTARVLVVDDILSNVKLLEAKLTAEYFEVVTAFNGLEAIEKTAECAPDIILLDVMMPGMDGFEACRRIKQNPKTAHVPVVMVTALDQPSDRVAGLDAGADDFLTKPVDDAALFARVRSLVRLKMMTDELRMRETTGQSMGLVDPAETLLENAPPGRILVIEDRPESVAWFKGALEAG-NDMVATDTFEEAMVRVRGGDFDLIVVSLGMRGFDGLRLCSQLRSLPQGRNVPILVLVSEGERRKLTQALEMGVNDYLTRPVDKNELIARVRTQLRKKRYADHLRHNVQLSLEMAITDQLTGLHNRRYMERHLANLVATANSGHRPLAFLIMDIDYFKSVNDTHGHDIGDEILREFATRIGANVRGIDLACRYGGEEFVVVMPDTDVSFAYAVAERLRRSVETTPFVISR-DPGKLSITISIGIAGSEGAADTAEALLHRADQALYRAKRDGRNRVVAD 454          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A3C0MG87_9PROT (PleD family two-component system response regulator n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0MG87_9PROT)

HSP 1 Score: 514 bits (1323), Expect = 1.150e-177
Identity = 268/458 (58.52%), Postives = 347/458 (75.76%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLID--QPGWDDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIGGVDP--VSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTED 1362
            MTARVLVVDD+PANVKLLEAKL AEY++V+TA NG +A++   +E PDI+LLDVMMP MDGF  CR +K+N   +H+PV+MVTALDQ SDRV GL++GADDF++KP+ +  LF RVRSL+RLK M DELR R+ATG+++GL D   P  +D+ +  GRILI++D+P S+ RI ETL+   +D  I+ D +EA+  AKGG +DL I+SLSL   DGLRLC+  R++E TR  P+L IVE+ +  RL R LD+GVNDYL+RPIE +E+ ARVRTQLR +R+ ++LR +  LSL+MAITD LTGL NRRYM  HL  L   A +  +P+S L++DID+FKQ+ND +GHD GD++L++FA  IS NVRGIDLACRYGGEEFVV+MP+TD+  A +VAER+RQ      F I  V P  + +T SIGVT +  P DT D++L+RAD ALYRAK +GRNRV  D
Sbjct:    1 MTARVLVVDDIPANVKLLEAKLGAEYFDVVTASNGLEALDKVASEKPDIVLLDVMMPGMDGFEVCRRIKKNPVTQHLPVVMVTALDQLSDRVTGLEAGADDFLTKPVNDVALFARVRSLVRLKTMVDELRLRQATGESMGLGDTLDPAAEDQ-SVRGRILIVEDRPTSAQRIGETLERD-NDIAIVADVSEAVVRAKGGDFDLAIISLSLDRQDGLRLCATLRSLEATRQTPILAIVEEGDMKRLVRALDIGVNDYLMRPIEGSELTARVRTQLRRKRFSDRLRHSLQLSLEMAITDQLTGLFNRRYMSRHLNTLISSAAQSGKPVSFLILDIDYFKQVNDTYGHDMGDEVLREFASRISANVRGIDLACRYGGEEFVVVMPDTDLTFAYMVAERLRQSVADIPFPIA-VSPGKLPVTISIGVTAIDGPGDTADAMLRRADQALYRAKRDGRNRVVAD 455          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A8D5WJF3_9PROT (Response regulator PleD n=1 Tax=Alphaproteobacteria bacterium SO-S41 TaxID=2829083 RepID=A0A8D5WJF3_9PROT)

HSP 1 Score: 510 bits (1314), Expect = 2.750e-176
Identity = 263/457 (57.55%), Postives = 340/457 (74.40%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQPGWDDEDAAP--GRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIGGVDP-VSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTED 1362
            MTARVLVVDD+ ANVKLLEAKL+AEY++V +A NG   +++A    PDIILLDVMMP MDGF  CR LK +    HIPV+MVTALDQP+DRVQGL +GADDF++KP+ +  LF RV+SL+RLKMMTDELR REATG +LG++D       +A    GRIL+++D+  S+ R  + L    H+  +  D  EAL LA+ G +DL+I+SLSL+N DG+RLCSQ +T+E TR  P+L +VE+ +  RL R L++G+NDYL+RP++ NE++ARV+TQ++ +RY ++LR+N  LSL+MAITD LTGL+NRRYM  HL      A    +P+S L++DIDFFK IND HGH  GD+IL+ FA  +  NVRGIDLACRYGGEEFVVIMPETD+A A  VAER+RQ      F I   D  +++T SIGVT++ +PDDT D+ILKRAD ALYRAK +GRNRV  +
Sbjct:    1 MTARVLVVDDIAANVKLLEAKLAAEYFDVFSASNGPDGLKLAAEHKPDIILLDVMMPGMDGFEVCRRLKNSPDTAHIPVVMVTALDQPADRVQGLDAGADDFLTKPVNDIALFARVKSLVRLKMMTDELRMREATGHSLGVVDAAEMLRSNAPDLGGRILLVEDRETSAKRTNDALSAD-HEMKVTADPLEALMLARDGDFDLVILSLSLQNTDGMRLCSQLKTLESTRHTPILALVEEGDTKRLVRALEIGINDYLIRPLDKNELVARVKTQIKRKRYSDRLRQNLQLSLEMAITDQLTGLYNRRYMSRHLDTQLKAALDAKKPMSFLIMDIDFFKSINDTHGHAIGDEILRAFAARLKANVRGIDLACRYGGEEFVVIMPETDVAFAYAVAERLRQNVADVPFPISSSDKALTVTVSIGVTSIERPDDTADTILKRADAALYRAKRDGRNRVVSE 456          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A363TIM0_9BRAD (PleD family two-component system response regulator n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TIM0_9BRAD)

HSP 1 Score: 508 bits (1308), Expect = 2.160e-175
Identity = 261/456 (57.24%), Postives = 340/456 (74.56%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLID-QPGWDDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIG-GVDPVSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTED 1362
            MTARVLVVDD+PANVKLLEA+L+AEY++V TA++G +A+E+ E    DI+LLDVMMP MDGF  CR LK N    HIPV+MVTALDQP+DRVQGL++GADDF++KP+ +  L  RVRSL+RLKM+TDELR R  T + +G++D +     E    GRIL++DD+  S  RI   L    H   +  +  EA+  A    YD++IVSL L N+DGLRLCSQ R+++ TR  P+L++ E  E  RL RGL++GVNDYLVRP++ NE++ARVRTQ+R +RY  +LR N  LS++MAITD LTGLHNRRYMETHL  L ++A    +P+SLL++DID+FK +ND HGHDAGD +L++FA  I +++RGIDLACRYGGEEFV++MPETDMA+A+LVAERIR+   +  F I  GV  + +T SIG+  L   +DT  ++LKRAD ALYRAK +GRNRV  D
Sbjct:    1 MTARVLVVDDIPANVKLLEARLTAEYFDVTTAMSGPEALEICERAQCDIVLLDVMMPGMDGFEVCRRLKANPLTHHIPVVMVTALDQPADRVQGLEAGADDFLTKPVSDIALISRVRSLVRLKMVTDELRMRAVTSREIGIMDAELQAVSETGRGGRILLVDDRRSSYERIAGILT-AEHTVDVETNPQEAVFHAAENDYDVLIVSLGLENFDGLRLCSQVRSLDRTRGTPILMVAEAEEGARLLRGLEIGVNDYLVRPLDKNELLARVRTQIRRKRYSARLRDNVQLSMEMAITDALTGLHNRRYMETHLATLVEQAAARGKPLSLLILDIDYFKSVNDTHGHDAGDDVLREFATRIRKSIRGIDLACRYGGEEFVIVMPETDMAVAALVAERIRRKVASEPFRIEQGVKSLDVTISIGLAALAGREDTGATLLKRADQALYRAKRDGRNRVVAD 455          
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Match: A0A8I1V0M0_9PROT (PleD family two-component system response regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1V0M0_9PROT)

HSP 1 Score: 507 bits (1306), Expect = 4.190e-175
Identity = 260/455 (57.14%), Postives = 334/455 (73.41%), Query Frame = 1
Query:    1 MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDIILLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGADDFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQPGWDDEDAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYDLIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMGVNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGLHNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKILQQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTETFAFNIGGVD-PVSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNRVTED 1362
            MTARVLVVDD+ +NVKLLEAKL+AEY+EV+TA NGQ+ +     ++PDI+LLDVMMP MDGF  CR +K N +  H+PV+MVTALDQPSDRV GL++GADDF++KP+ ++ LF RVRSL+RLK+MTDELR RE TGQ +GLID      ++   GRIL+I+D+  S A     LQ  +H     +   EAL   KGG +DLI+VSL +R +DGLRLCSQ R++ E R VP+L++V D +  +L + L+MGVNDYL RP++ NE+IARVRTQLR +RY ++LR N  LSL+MAITD LTGLHNRRYM  HL  L   ARR  RP++ +++DIDFFKQ+ND +GHD GD++L++FA  IS NVRGIDLACRYGGEEFVV MP+TD+A A+ +AER+RQ  ET    +      +++T SIG+       D  + +L RAD ALYRAK  GRNRV  D
Sbjct:    1 MTARVLVVDDILSNVKLLEAKLTAEYFEVVTAFNGQECLARMAEQVPDIVLLDVMMPGMDGFEVCRRIKANPKTAHVPVVMVTALDQPSDRVTGLEAGADDFLTKPVDDSALFARVRSLVRLKLMTDELRMRETTGQGMGLIDPAETLQDNNLSGRILVIEDRAESVAWFTAALQ-ASHQVSSADTFEEALVRVKGGDFDLIVVSLGMRGFDGLRLCSQLRSLPEGRHVPILVVVSDGDRRKLTQALEMGVNDYLTRPVDRNELIARVRTQLRKKRYADRLRHNVQLSLEMAITDQLTGLHNRRYMSRHLDALIANARRHDRPLAFVIMDIDFFKQVNDTYGHDIGDEVLKEFASRISANVRGIDLACRYGGEEFVVAMPDTDIAFATNIAERLRQSIETTPVQVSRAPGKLNITISIGIARYEGEGDDAEKLLHRADQALYRAKRSGRNRVVSD 454          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig876.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352KAN0_9PROT2.960e-22370.42PleD family two-component system response regulato... [more]
A0A3C0TTY9_9PROT9.230e-20577.04PleD family two-component system response regulato... [more]
A0A7Y8SXY3_9PROT5.800e-18359.61PleD family two-component system response regulato... [more]
X5MPF3_9HYPH2.610e-18159.65Pole remodelling regulatory diguanylate cyclase n=... [more]
A0A845QBZ8_9HYPH2.000e-17858.11PleD family two-component system response regulato... [more]
A0A8I1USV5_9PROT3.880e-17858.99PleD family two-component system response regulato... [more]
A0A3C0MG87_9PROT1.150e-17758.52PleD family two-component system response regulato... [more]
A0A8D5WJF3_9PROT2.750e-17657.55Response regulator PleD n=1 Tax=Alphaproteobacteri... [more]
A0A363TIM0_9BRAD2.160e-17557.24PleD family two-component system response regulato... [more]
A0A8I1V0M0_9PROT4.190e-17557.14PleD family two-component system response regulato... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig876contigP-wetherbeei_contig876:1491..2861 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog402881.Plav_2815
Preferred namepleD
PFAMsGGDEF,Response_reg
Model size1371
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02488
KEGG ReactionR08057
KEGG Pathwayko02020,ko04112,map02020,map04112
KEGG ModuleM00511
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464
Exons1
Evalue4.71e-174
EggNOG OGsCOG0745@1|root,COG2199@1|root,COG0745@2|Bacteria,COG3706@2|Bacteria,1R7HC@1224|Proteobacteria,2TQQM@28211|Alphaproteobacteria,1JNCR@119043|Rhodobiaceae
EC2.7.7.65
Descriptiondiguanylate cyclase
Cds size1371
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko02022
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187058.480735-CDS-P-wetherbeei_contig876:1490..28611683187058.480735-CDS-P-wetherbeei_contig876:1490..2861Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig876 1491..2861 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig876.4.1prot_P-wetherbeei_contig876.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig876 1491..2861 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig876.4.1

>prot_P-wetherbeei_contig876.4.1 ID=prot_P-wetherbeei_contig876.4.1|Name=mRNA_P-wetherbeei_contig876.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=457bp
MTARVLVVDDVPANVKLLEAKLSAEYYEVLTAVNGQQAIEVAEAEMPDII
LLDVMMPIMDGFTACRALKENARLRHIPVIMVTALDQPSDRVQGLQSGAD
DFISKPIKNNPLFPRVRSLIRLKMMTDELRAREATGQNLGLIDQPGWDDE
DAAPGRILIIDDQPRSSARIRETLQEGAHDSHIIEDCAEALRLAKGGGYD
LIIVSLSLRNYDGLRLCSQFRTIEETRTVPLLIIVEDPEDPRLARGLDMG
VNDYLVRPIESNEMIARVRTQLRWRRYEEKLRRNFHLSLQMAITDGLTGL
HNRRYMETHLKILTDRARRESRPISLLMIDIDFFKQINDVHGHDAGDKIL
QQFAVGISRNVRGIDLACRYGGEEFVVIMPETDMAIASLVAERIRQYTET
FAFNIGGVDPVSMTTSIGVTTLCKPDDTPDSILKRADDALYRAKNEGRNR
VTEDLG*
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mRNA from alignment at P-wetherbeei_contig876:1491..2861+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig876.4.1 ID=mRNA_P-wetherbeei_contig876.4.1|Name=mRNA_P-wetherbeei_contig876.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1371bp|location=Sequence derived from alignment at P-wetherbeei_contig876:1491..2861+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGCCCGCGTACTGGTCGTTGACGATGTTCCCGCGAATGTAAAGCT TCTCGAAGCCAAGCTGAGCGCGGAATATTATGAGGTTCTGACGGCTGTAA ACGGGCAGCAGGCGATCGAGGTTGCCGAAGCCGAGATGCCGGACATTATT CTGCTTGATGTCATGATGCCGATCATGGATGGCTTTACCGCCTGCCGTGC GCTGAAGGAAAATGCGCGCCTGCGGCATATTCCCGTGATTATGGTGACGG CGCTGGATCAGCCATCCGACCGGGTGCAGGGCTTGCAGTCGGGCGCGGAT GATTTCATCAGTAAACCGATCAAAAATAATCCCCTGTTTCCCAGGGTGCG CAGCCTTATCCGTCTGAAGATGATGACCGATGAATTGCGCGCGCGTGAAG CAACGGGGCAAAATCTGGGGCTGATAGATCAGCCGGGCTGGGATGATGAG GATGCGGCGCCAGGCCGTATACTGATCATCGATGATCAGCCCCGTTCCAG CGCGCGCATCCGCGAGACGCTCCAGGAGGGCGCGCACGATTCACACATTA TTGAGGATTGCGCCGAGGCGCTGCGTCTGGCGAAAGGCGGCGGATATGAT CTGATTATTGTCAGCCTTTCATTACGCAATTATGACGGGCTGCGCCTGTG TTCACAGTTCCGTACAATCGAAGAAACCCGCACGGTGCCGTTGCTGATCA TTGTCGAAGACCCGGAAGATCCGCGTCTGGCGCGCGGACTGGACATGGGC GTTAATGATTATCTGGTGCGTCCTATCGAAAGCAACGAGATGATCGCACG GGTTCGGACCCAGCTGCGCTGGCGGCGCTATGAAGAAAAGCTGCGCCGCA ATTTCCACCTGAGTTTGCAGATGGCCATTACGGATGGGCTGACCGGGCTG CATAACCGGCGTTATATGGAAACGCATCTGAAGATTCTGACGGATCGCGC CAGGCGGGAAAGCCGTCCCATTTCTCTGCTGATGATAGATATTGATTTTT TCAAACAGATCAATGACGTGCATGGCCATGATGCGGGCGACAAAATCCTT CAGCAATTCGCCGTGGGAATTTCCCGCAATGTCCGCGGCATTGATCTGGC CTGCCGGTATGGCGGCGAGGAGTTTGTTGTCATCATGCCGGAGACGGATA TGGCGATAGCGTCTCTCGTTGCAGAGCGTATTCGTCAGTACACGGAAACT TTTGCGTTCAACATAGGCGGTGTAGATCCGGTTTCCATGACCACCAGCAT TGGCGTCACCACGCTGTGCAAACCCGATGACACCCCGGACAGTATTCTGA AACGTGCCGATGACGCGCTATACCGCGCCAAAAACGAAGGCCGTAACCGG GTTACGGAAGATCTCGGATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig876:1491..2861+

>mRNA_P-wetherbeei_contig876.4.1 ID=mRNA_P-wetherbeei_contig876.4.1|Name=mRNA_P-wetherbeei_contig876.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1371bp|location=Sequence derived from alignment at P-wetherbeei_contig876:1491..2861+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGCCCGCGTACTGGTCGTTGACGATGTTCCCGCGAATGTAAAGCT
TCTCGAAGCCAAGCTGAGCGCGGAATATTATGAGGTTCTGACGGCTGTAA
ACGGGCAGCAGGCGATCGAGGTTGCCGAAGCCGAGATGCCGGACATTATT
CTGCTTGATGTCATGATGCCGATCATGGATGGCTTTACCGCCTGCCGTGC
GCTGAAGGAAAATGCGCGCCTGCGGCATATTCCCGTGATTATGGTGACGG
CGCTGGATCAGCCATCCGACCGGGTGCAGGGCTTGCAGTCGGGCGCGGAT
GATTTCATCAGTAAACCGATCAAAAATAATCCCCTGTTTCCCAGGGTGCG
CAGCCTTATCCGTCTGAAGATGATGACCGATGAATTGCGCGCGCGTGAAG
CAACGGGGCAAAATCTGGGGCTGATAGATCAGCCGGGCTGGGATGATGAG
GATGCGGCGCCAGGCCGTATACTGATCATCGATGATCAGCCCCGTTCCAG
CGCGCGCATCCGCGAGACGCTCCAGGAGGGCGCGCACGATTCACACATTA
TTGAGGATTGCGCCGAGGCGCTGCGTCTGGCGAAAGGCGGCGGATATGAT
CTGATTATTGTCAGCCTTTCATTACGCAATTATGACGGGCTGCGCCTGTG
TTCACAGTTCCGTACAATCGAAGAAACCCGCACGGTGCCGTTGCTGATCA
TTGTCGAAGACCCGGAAGATCCGCGTCTGGCGCGCGGACTGGACATGGGC
GTTAATGATTATCTGGTGCGTCCTATCGAAAGCAACGAGATGATCGCACG
GGTTCGGACCCAGCTGCGCTGGCGGCGCTATGAAGAAAAGCTGCGCCGCA
ATTTCCACCTGAGTTTGCAGATGGCCATTACGGATGGGCTGACCGGGCTG
CATAACCGGCGTTATATGGAAACGCATCTGAAGATTCTGACGGATCGCGC
CAGGCGGGAAAGCCGTCCCATTTCTCTGCTGATGATAGATATTGATTTTT
TCAAACAGATCAATGACGTGCATGGCCATGATGCGGGCGACAAAATCCTT
CAGCAATTCGCCGTGGGAATTTCCCGCAATGTCCGCGGCATTGATCTGGC
CTGCCGGTATGGCGGCGAGGAGTTTGTTGTCATCATGCCGGAGACGGATA
TGGCGATAGCGTCTCTCGTTGCAGAGCGTATTCGTCAGTACACGGAAACT
TTTGCGTTCAACATAGGCGGTGTAGATCCGGTTTCCATGACCACCAGCAT
TGGCGTCACCACGCTGTGCAAACCCGATGACACCCCGGACAGTATTCTGA
AACGTGCCGATGACGCGCTATACCGCGCCAAAAACGAAGGCCGTAACCGG
GTTACGGAAGATCTCGGATAA
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