mRNA_P-wetherbeei_contig8751.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A6H5K232_9PHAE (eIF2B_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K232_9PHAE) HSP 1 Score: 300 bits (769), Expect = 9.490e-99 Identity = 171/208 (82.21%), Postives = 182/208 (87.50%), Query Frame = 1
Query: 1 AEAEPEVDMSMFDLSKKKXXXXXXXXXXXXXXXXXGGTDKAA----NYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIRNAVK 612
A E EVD+SMFDLSKK XXXXXXXXXXXXXXXXX Y YETLLERIQ+L+H NNPELAERSRITLKPPQLMR+GTRKTLW NFQ+IC+LMKR PEHVF FVVAELGTEGSIDG QRLVLRGKYVPKY+ESLLRKYIVEYVTC+MCRSP+TTLTR+P SRLFFVHCQDCGSSRSV I SGFHAQTRADRRA+RNAVK
Sbjct: 51 AAVEAEVDLSMFDLSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALRNAVK 258
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A836CND3_9STRA (Eukaryotic initiation factor 2 beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND3_9STRA) HSP 1 Score: 296 bits (757), Expect = 2.410e-97 Identity = 163/202 (80.69%), Postives = 178/202 (88.12%), Query Frame = 1
Query: 19 VDMS-MFDLS-KKKXXXXXXXXXXXXXXXXXGG--TDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIRNAVK 612
VDM+ MFDLS KKKXXXXXXXXXXX GG + +Y YETLLERIQ+L+H NNPEL+ERSRITLKPPQLMR+GTRKT+W NFQEICKLMKR+PEHVF FVVAELGTEGS+DG QRLVLRGKYVPKY+ESLLRKYIVEYVTC+MCRSP+TTLTR+P SRL FVHCQDCGSSRSV + SGFHAQTRADRRAIRNAVK
Sbjct: 29 VDMNAMFDLSVKKKXXXXXXXXXXXDGEPAEGGKAAEGICSYPYETLLERIQTLLHVNNPELSERSRITLKPPQLMRMGTRKTVWANFQEICKLMKRSPEHVFSFVVAELGTEGSVDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLHFVHCQDCGSSRSVAPVRSGFHAQTRADRRAIRNAVK 230
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A7S2D5T9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5T9_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.920e-84 Identity = 121/159 (76.10%), Postives = 139/159 (87.42%), Query Frame = 1
Query: 124 ANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
ANY YE LL+R+ ++H NP+L E+ R TLKPPQLMR+GT+KTLW NFQ+ICK M+RNPEHVF F +AELGTEGSIDG QRLV+RGKYVPKY+ESLLRKYIVEYVTC+MCRSP+TTLTR+ SRLFF+HCQDCGSSRSV I GFHAQTRADRRA+R
Sbjct: 62 ANYAYEELLQRVVDIIHNKNPDLIEKRRTTLKPPQLMRIGTKKTLWANFQDICKSMRRNPEHVFSFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDSVSRLFFMHCQDCGSSRSVAPIRQGFHAQTRADRRAMR 220
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A7S2SBF4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBF4_9STRA) HSP 1 Score: 262 bits (669), Expect = 5.040e-84 Identity = 119/165 (72.12%), Postives = 144/165 (87.27%), Query Frame = 1
Query: 106 GGTDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
GG K A+Y+Y+ LL+R+ ++H NPEL E+ R T+KPP LMR+GT+KTLW NFQ+ICK M+RNPEHVFQF +AELGTEGSIDG QRLV+RGKYVPKY+ESLLRKYIVEYVTC+MCRSP+T+LTR+ SRL+F++CQDCGSSRSV I +GFHAQTRADRRA+R
Sbjct: 64 GGEHKYASYSYDQLLQRVVDIIHNKNPELTEKKRTTIKPPMLMRIGTKKTLWANFQDICKSMRRNPEHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTSLTRDSVSRLYFINCQDCGSSRSVAPIRAGFHAQTRADRRAMR 228
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: F0XZH3_AURAN (eIF2B_5 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZH3_AURAN) HSP 1 Score: 256 bits (655), Expect = 5.300e-83 Identity = 119/154 (77.27%), Postives = 139/154 (90.26%), Query Frame = 1
Query: 130 YTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRR 591
Y+Y+ LL+R+ ++ NNPEL+E+ R T+KPPQLMRVGT+KTLWVNFQEICK+M R+PEHVFQF +AELGTEGSIDG QRLV+RGKYVPKY+ESLLRKYIVEYVTC+MCRSPST+LTR+ SRLFF+HCQDCGSSRSV I +GFHAQTRADRR
Sbjct: 1 YSYKELLDRVVGILQANNPELSEKRRHTMKPPQLMRVGTKKTLWVNFQEICKMMHRSPEHVFQFFMAELGTEGSIDGTQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPSTSLTRDSVSRLFFLHCQDCGSSRSVAPIRAGFHAQTRADRR 154
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A8J2SK24_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SK24_9STRA) HSP 1 Score: 258 bits (659), Expect = 7.370e-83 Identity = 133/191 (69.63%), Postives = 161/191 (84.29%), Query Frame = 1
Query: 28 SMFDLSKKKXXXXXXXXXXXXXXXXXGGTDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
+MFDLSK KXXXXXXXXXXX K ANYTY+ LL+R+ ++ E NPEL E+ R T+KPPQLMR+GT+KTLWVN+ EICK M R+PEHVFQ+ +AELGT+GSIDG QRL+++GKY+PKY+ESLLRKYIVEYVTC+MCRSP T+LTR+P SRL+F+HCQ+CGSSRSV I +GFHAQTRADRRA+R
Sbjct: 17 AMFDLSKMKXXXXXXXXXXXETAKTDS---KYANYTYDELLDRVAKIIQEKNPELGEKRRHTMKPPQLMRIGTKKTLWVNYAEICKAMNRSPEHVFQYFMAELGTDGSIDGTQRLIIKGKYMPKYIESLLRKYIVEYVTCQMCRSPQTSLTRDPTSRLYFLHCQNCGSSRSVTPIRAGFHAQTRADRRALR 204
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: T0Q2P4_SAPDV (Translation initiation factor 2 subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q2P4_SAPDV) HSP 1 Score: 258 bits (658), Expect = 2.250e-82 Identity = 140/210 (66.67%), Postives = 164/210 (78.10%), Query Frame = 1
Query: 1 AEAEPEVDMSMFDLSKKKXXXXXXXXXXXXXXXXXG----------GTDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
A A PE SMF+LSK KXXXXXXXXXX + A+YTYE +L+R+ + +HE NPEL+ R++ T+KPPQLMRVGT+KTLWVNFQEICK+M RNPEHV QF ++ELGTEGSIDG+QRLV+RG+YVPKY+ESLLRKYI EYVTC+MCRSP+TTLTR+ SRL FVHCQ+CGSSRSV I SGFHA TRADRRA R
Sbjct: 18 APAAPEDVASMFNLSKTKXXXXXXXXXXAEDAVATSTEAAPAVVDASIEDPASYTYEEMLDRVMNKLHELNPELSNRTKHTMKPPQLMRVGTKKTLWVNFQEICKMMHRNPEHVLQFTLSELGTEGSIDGSQRLVIRGRYVPKYIESLLRKYITEYVTCQMCRSPNTTLTRDNVSRLHFVHCQECGSSRSVAAIRSGFHAATRADRRAAR 227
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A6V1N6Q0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N6Q0_HETAK) HSP 1 Score: 255 bits (652), Expect = 2.540e-81 Identity = 118/157 (75.16%), Postives = 139/157 (88.54%), Query Frame = 1
Query: 130 YTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
YTY+ LLERI ++H+ NPEL+E+ R T+KPPQ+MR+GTRKT+W NFQEICK MKRNPEHVFQFVV+ELGTEGSIDG Q+LVLRG+ PKY+ESLLRKYIVEYVTC+MCR+ +TTLTR+ SRLFFVHCQDCGSSR V I +GFHAQTRA+RRA+R
Sbjct: 81 YTYDELLERINDILHDKNPELSEKRRQTIKPPQMMRIGTRKTVWTNFQEICKSMKRNPEHVFQFVVSELGTEGSIDGKQQLVLRGRLYPKYIESLLRKYIVEYVTCQMCRAANTTLTRDQVSRLFFVHCQDCGSSRCVAQIRAGFHAQTRAERRALR 237
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A7S2RU55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU55_9STRA) HSP 1 Score: 255 bits (651), Expect = 5.890e-81 Identity = 118/165 (71.52%), Postives = 142/165 (86.06%), Query Frame = 1
Query: 115 DKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIRNAV 609
D+ A+YTY+ +LERI + +H NPEL E+ R T+KPPQL RVGT+KTLWVNFQEIC +M+R+P+HVFQF +AELGTEGSIDG QRLV+RGKYVPKY+ESLLRKYIVEYVTC+MCRSP+T LTR+ SRL+F+ C+DCGSSRSV I SG+HA +RADRRA RNA
Sbjct: 88 DRKADYTYDDMLERIMTTIHAQNPELIEKKRRTMKPPQLTRVGTKKTLWVNFQEICTMMQRSPQHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTELTRDSGSRLYFIQCRDCGSSRSVAPISSGYHATSRADRRAARNAA 252
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A1V9ZJD9_9STRA (Eukaryotic translation initiation factor 2 subunit beta n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJD9_9STRA) HSP 1 Score: 254 bits (648), Expect = 8.110e-81 Identity = 139/213 (65.26%), Postives = 165/213 (77.46%), Query Frame = 1
Query: 1 AEAEPEVDMSMFDLSKKKXXXXXXXXXXXXXXXXXG-------------GTDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
A A PE ++ FDL+KK XXXXXXXXXXXX G + A+YTYE +L+R+ + +HE NPEL+ R++ +KPPQLMRVGT+KTLWVNFQEICK+M RNPEHV QF ++ELGTEGSIDG+QRLV+RG+YVPKY+ESLLRKYI EYV C+MCRSP+TTLTR+ SRL FVHCQ+CGSSRSV I SGFHA TRADRRA R
Sbjct: 18 APAAPEEIVATFDLTKKXXXXXXXXXXXXXAEATEGDDAAEAAPTAVAASVEDPASYTYEEMLDRVMNKLHELNPELSNRTKSVMKPPQLMRVGTKKTLWVNFQEICKMMHRNPEHVLQFTLSELGTEGSIDGSQRLVIRGRYVPKYIESLLRKYITEYVMCQMCRSPNTTLTRDNVSRLHFVHCQECGSSRSVAAIRSGFHAATRADRRAAR 230 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8751.1.2 >prot_P-wetherbeei_contig8751.1.2 ID=prot_P-wetherbeei_contig8751.1.2|Name=mRNA_P-wetherbeei_contig8751.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp MSMFDLSKKKKKKKKKDAVDAGEEGGDGGTDKAANYTYETLLERIQSLVHback to top mRNA from alignment at P-wetherbeei_contig8751:215..2184- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8751.1.2 ID=mRNA_P-wetherbeei_contig8751.1.2|Name=mRNA_P-wetherbeei_contig8751.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1970bp|location=Sequence derived from alignment at P-wetherbeei_contig8751:215..2184- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8751:215..2184- >mRNA_P-wetherbeei_contig8751.1.2 ID=mRNA_P-wetherbeei_contig8751.1.2|Name=mRNA_P-wetherbeei_contig8751.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig8751:215..2184- (Phaeothamnion wetherbeei SAG_119_79)back to top |