mRNA_P-wetherbeei_contig8751.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8751.1.2
Unique NamemRNA_P-wetherbeei_contig8751.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A6H5K232_9PHAE (eIF2B_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K232_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 9.490e-99
Identity = 171/208 (82.21%), Postives = 182/208 (87.50%), Query Frame = 1
Query:    1 AEAEPEVDMSMFDLSKKKXXXXXXXXXXXXXXXXXGGTDKAA----NYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIRNAVK 612
            A  E EVD+SMFDLSKK XXXXXXXXXXXXXXXXX            Y YETLLERIQ+L+H NNPELAERSRITLKPPQLMR+GTRKTLW NFQ+IC+LMKR PEHVF FVVAELGTEGSIDG QRLVLRGKYVPKY+ESLLRKYIVEYVTC+MCRSP+TTLTR+P SRLFFVHCQDCGSSRSV  I SGFHAQTRADRRA+RNAVK
Sbjct:   51 AAVEAEVDLSMFDLSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALRNAVK 258          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A836CND3_9STRA (Eukaryotic initiation factor 2 beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND3_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.410e-97
Identity = 163/202 (80.69%), Postives = 178/202 (88.12%), Query Frame = 1
Query:   19 VDMS-MFDLS-KKKXXXXXXXXXXXXXXXXXGG--TDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIRNAVK 612
            VDM+ MFDLS KKKXXXXXXXXXXX      GG   +   +Y YETLLERIQ+L+H NNPEL+ERSRITLKPPQLMR+GTRKT+W NFQEICKLMKR+PEHVF FVVAELGTEGS+DG QRLVLRGKYVPKY+ESLLRKYIVEYVTC+MCRSP+TTLTR+P SRL FVHCQDCGSSRSV  + SGFHAQTRADRRAIRNAVK
Sbjct:   29 VDMNAMFDLSVKKKXXXXXXXXXXXDGEPAEGGKAAEGICSYPYETLLERIQTLLHVNNPELSERSRITLKPPQLMRMGTRKTVWANFQEICKLMKRSPEHVFSFVVAELGTEGSVDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLHFVHCQDCGSSRSVAPVRSGFHAQTRADRRAIRNAVK 230          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A7S2D5T9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5T9_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.920e-84
Identity = 121/159 (76.10%), Postives = 139/159 (87.42%), Query Frame = 1
Query:  124 ANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
            ANY YE LL+R+  ++H  NP+L E+ R TLKPPQLMR+GT+KTLW NFQ+ICK M+RNPEHVF F +AELGTEGSIDG QRLV+RGKYVPKY+ESLLRKYIVEYVTC+MCRSP+TTLTR+  SRLFF+HCQDCGSSRSV  I  GFHAQTRADRRA+R
Sbjct:   62 ANYAYEELLQRVVDIIHNKNPDLIEKRRTTLKPPQLMRIGTKKTLWANFQDICKSMRRNPEHVFSFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDSVSRLFFMHCQDCGSSRSVAPIRQGFHAQTRADRRAMR 220          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A7S2SBF4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBF4_9STRA)

HSP 1 Score: 262 bits (669), Expect = 5.040e-84
Identity = 119/165 (72.12%), Postives = 144/165 (87.27%), Query Frame = 1
Query:  106 GGTDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
            GG  K A+Y+Y+ LL+R+  ++H  NPEL E+ R T+KPP LMR+GT+KTLW NFQ+ICK M+RNPEHVFQF +AELGTEGSIDG QRLV+RGKYVPKY+ESLLRKYIVEYVTC+MCRSP+T+LTR+  SRL+F++CQDCGSSRSV  I +GFHAQTRADRRA+R
Sbjct:   64 GGEHKYASYSYDQLLQRVVDIIHNKNPELTEKKRTTIKPPMLMRIGTKKTLWANFQDICKSMRRNPEHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTSLTRDSVSRLYFINCQDCGSSRSVAPIRAGFHAQTRADRRAMR 228          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: F0XZH3_AURAN (eIF2B_5 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZH3_AURAN)

HSP 1 Score: 256 bits (655), Expect = 5.300e-83
Identity = 119/154 (77.27%), Postives = 139/154 (90.26%), Query Frame = 1
Query:  130 YTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRR 591
            Y+Y+ LL+R+  ++  NNPEL+E+ R T+KPPQLMRVGT+KTLWVNFQEICK+M R+PEHVFQF +AELGTEGSIDG QRLV+RGKYVPKY+ESLLRKYIVEYVTC+MCRSPST+LTR+  SRLFF+HCQDCGSSRSV  I +GFHAQTRADRR
Sbjct:    1 YSYKELLDRVVGILQANNPELSEKRRHTMKPPQLMRVGTKKTLWVNFQEICKMMHRSPEHVFQFFMAELGTEGSIDGTQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPSTSLTRDSVSRLFFLHCQDCGSSRSVAPIRAGFHAQTRADRR 154          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A8J2SK24_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SK24_9STRA)

HSP 1 Score: 258 bits (659), Expect = 7.370e-83
Identity = 133/191 (69.63%), Postives = 161/191 (84.29%), Query Frame = 1
Query:   28 SMFDLSKKKXXXXXXXXXXXXXXXXXGGTDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
            +MFDLSK KXXXXXXXXXXX          K ANYTY+ LL+R+  ++ E NPEL E+ R T+KPPQLMR+GT+KTLWVN+ EICK M R+PEHVFQ+ +AELGT+GSIDG QRL+++GKY+PKY+ESLLRKYIVEYVTC+MCRSP T+LTR+P SRL+F+HCQ+CGSSRSV  I +GFHAQTRADRRA+R
Sbjct:   17 AMFDLSKMKXXXXXXXXXXXETAKTDS---KYANYTYDELLDRVAKIIQEKNPELGEKRRHTMKPPQLMRIGTKKTLWVNYAEICKAMNRSPEHVFQYFMAELGTDGSIDGTQRLIIKGKYMPKYIESLLRKYIVEYVTCQMCRSPQTSLTRDPTSRLYFLHCQNCGSSRSVTPIRAGFHAQTRADRRALR 204          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: T0Q2P4_SAPDV (Translation initiation factor 2 subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q2P4_SAPDV)

HSP 1 Score: 258 bits (658), Expect = 2.250e-82
Identity = 140/210 (66.67%), Postives = 164/210 (78.10%), Query Frame = 1
Query:    1 AEAEPEVDMSMFDLSKKKXXXXXXXXXXXXXXXXXG----------GTDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
            A A PE   SMF+LSK KXXXXXXXXXX                    +  A+YTYE +L+R+ + +HE NPEL+ R++ T+KPPQLMRVGT+KTLWVNFQEICK+M RNPEHV QF ++ELGTEGSIDG+QRLV+RG+YVPKY+ESLLRKYI EYVTC+MCRSP+TTLTR+  SRL FVHCQ+CGSSRSV  I SGFHA TRADRRA R
Sbjct:   18 APAAPEDVASMFNLSKTKXXXXXXXXXXAEDAVATSTEAAPAVVDASIEDPASYTYEEMLDRVMNKLHELNPELSNRTKHTMKPPQLMRVGTKKTLWVNFQEICKMMHRNPEHVLQFTLSELGTEGSIDGSQRLVIRGRYVPKYIESLLRKYITEYVTCQMCRSPNTTLTRDNVSRLHFVHCQECGSSRSVAAIRSGFHAATRADRRAAR 227          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A6V1N6Q0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N6Q0_HETAK)

HSP 1 Score: 255 bits (652), Expect = 2.540e-81
Identity = 118/157 (75.16%), Postives = 139/157 (88.54%), Query Frame = 1
Query:  130 YTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
            YTY+ LLERI  ++H+ NPEL+E+ R T+KPPQ+MR+GTRKT+W NFQEICK MKRNPEHVFQFVV+ELGTEGSIDG Q+LVLRG+  PKY+ESLLRKYIVEYVTC+MCR+ +TTLTR+  SRLFFVHCQDCGSSR V  I +GFHAQTRA+RRA+R
Sbjct:   81 YTYDELLERINDILHDKNPELSEKRRQTIKPPQMMRIGTRKTVWTNFQEICKSMKRNPEHVFQFVVSELGTEGSIDGKQQLVLRGRLYPKYIESLLRKYIVEYVTCQMCRAANTTLTRDQVSRLFFVHCQDCGSSRCVAQIRAGFHAQTRAERRALR 237          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A7S2RU55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU55_9STRA)

HSP 1 Score: 255 bits (651), Expect = 5.890e-81
Identity = 118/165 (71.52%), Postives = 142/165 (86.06%), Query Frame = 1
Query:  115 DKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIRNAV 609
            D+ A+YTY+ +LERI + +H  NPEL E+ R T+KPPQL RVGT+KTLWVNFQEIC +M+R+P+HVFQF +AELGTEGSIDG QRLV+RGKYVPKY+ESLLRKYIVEYVTC+MCRSP+T LTR+  SRL+F+ C+DCGSSRSV  I SG+HA +RADRRA RNA 
Sbjct:   88 DRKADYTYDDMLERIMTTIHAQNPELIEKKRRTMKPPQLTRVGTKKTLWVNFQEICTMMQRSPQHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTELTRDSGSRLYFIQCRDCGSSRSVAPISSGYHATSRADRRAARNAA 252          
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Match: A0A1V9ZJD9_9STRA (Eukaryotic translation initiation factor 2 subunit beta n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJD9_9STRA)

HSP 1 Score: 254 bits (648), Expect = 8.110e-81
Identity = 139/213 (65.26%), Postives = 165/213 (77.46%), Query Frame = 1
Query:    1 AEAEPEVDMSMFDLSKKKXXXXXXXXXXXXXXXXXG-------------GTDKAANYTYETLLERIQSLVHENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFVVAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTTLTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIR 600
            A A PE  ++ FDL+KK XXXXXXXXXXXX     G               +  A+YTYE +L+R+ + +HE NPEL+ R++  +KPPQLMRVGT+KTLWVNFQEICK+M RNPEHV QF ++ELGTEGSIDG+QRLV+RG+YVPKY+ESLLRKYI EYV C+MCRSP+TTLTR+  SRL FVHCQ+CGSSRSV  I SGFHA TRADRRA R
Sbjct:   18 APAAPEEIVATFDLTKKXXXXXXXXXXXXXAEATEGDDAAEAAPTAVAASVEDPASYTYEEMLDRVMNKLHELNPELSNRTKSVMKPPQLMRVGTKKTLWVNFQEICKMMHRNPEHVLQFTLSELGTEGSIDGSQRLVIRGRYVPKYIESLLRKYITEYVMCQMCRSPNTTLTRDNVSRLHFVHCQECGSSRSVAAIRSGFHAATRADRRAAR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8751.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K232_9PHAE9.490e-9982.21eIF2B_5 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CND3_9STRA2.410e-9780.69Eukaryotic initiation factor 2 beta subunit n=1 Ta... [more]
A0A7S2D5T9_9STRA1.920e-8476.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SBF4_9STRA5.040e-8472.12Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0XZH3_AURAN5.300e-8377.27eIF2B_5 domain-containing protein (Fragment) n=1 T... [more]
A0A8J2SK24_9STRA7.370e-8369.63Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
T0Q2P4_SAPDV2.250e-8266.67Translation initiation factor 2 subunit 2 n=2 Tax=... [more]
A0A6V1N6Q0_HETAK2.540e-8175.16Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2RU55_9STRA5.890e-8171.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1V9ZJD9_9STRA8.110e-8165.26Eukaryotic translation initiation factor 2 subunit... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8751contigP-wetherbeei_contig8751:215..2184 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G233
Preferred nameSUI3
PFAMseIF-5_eIF-2B
Model size970
Max annot lvl2759|Eukaryota
KEGG koko:K03238
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005850,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016282,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0031369,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043614,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons4
Evalue3.04e-99
EggNOG OGsCOG1601@1|root,KOG2768@2759|Eukaryota
Ec32 ortholog descriptioneukaryotic initiation factor 2 beta subunit
Ec32 orthologEc-11_003650.1
Descriptiontranslation initiation factor activity
Cds size591
COG categoryJ
BRITEko00000,ko00001,ko01009,ko03012
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8751.1.2prot_P-wetherbeei_contig8751.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8751 570..2160 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187058.1098044-UTR-P-wetherbeei_contig8751:214..5691683187058.1098044-UTR-P-wetherbeei_contig8751:214..569Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8751 215..569 -
1683187058.1582382-UTR-P-wetherbeei_contig8751:2160..21841683187058.1582382-UTR-P-wetherbeei_contig8751:2160..2184Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8751 2161..2184 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187058.1239324-CDS-P-wetherbeei_contig8751:569..6651683187058.1239324-CDS-P-wetherbeei_contig8751:569..665Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8751 570..665 -
1683187058.1326578-CDS-P-wetherbeei_contig8751:980..11271683187058.1326578-CDS-P-wetherbeei_contig8751:980..1127Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8751 981..1127 -
1683187058.1411302-CDS-P-wetherbeei_contig8751:1394..16041683187058.1411302-CDS-P-wetherbeei_contig8751:1394..1604Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8751 1395..1604 -
1683187058.1497104-CDS-P-wetherbeei_contig8751:2022..21601683187058.1497104-CDS-P-wetherbeei_contig8751:2022..2160Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8751 2023..2160 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8751.1.2

>prot_P-wetherbeei_contig8751.1.2 ID=prot_P-wetherbeei_contig8751.1.2|Name=mRNA_P-wetherbeei_contig8751.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp
MSMFDLSKKKKKKKKKDAVDAGEEGGDGGTDKAANYTYETLLERIQSLVH
ENNPELAERSRITLKPPQLMRVGTRKTLWVNFQEICKLMKRNPEHVFQFV
VAELGTEGSIDGAQRLVLRGKYVPKYVESLLRKYIVEYVTCRMCRSPSTT
LTREPASRLFFVHCQDCGSSRSVGTIHSGFHAQTRADRRAIRNAVK*
back to top

mRNA from alignment at P-wetherbeei_contig8751:215..2184-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8751.1.2 ID=mRNA_P-wetherbeei_contig8751.1.2|Name=mRNA_P-wetherbeei_contig8751.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1970bp|location=Sequence derived from alignment at P-wetherbeei_contig8751:215..2184- (Phaeothamnion wetherbeei SAG_119_79)
GCGGAGGCGGAGCCGGAAGTCGACATGTCAATGTTCGACCTGAGCAAGAA GAAAAAGAAGAAGAAGAAAAAGGATGCGGTGGACGCGGGTGAGGAGGGCG GAGACGGGGGGACGGACAAGGCGGCCAACTACACGTACGAAACGCTGCTC GAGCGCATCCAGGTGCGGCCCGTCGGACCACGAAGCTTCTTTGTCTTCCC TTTTCTTGCTGCATTCCTTAGTCGAAGTGAACAACAGAAAGGGGAAGGTG AACGATCGTGCTGATTGATCTATGACGACTGCAAACACGGCTGAATGGTT ACCAACTACTTCTGTAGACTATCTTTGCCATACCACACACCCATTGACCG AGATCAAATCGCGCGCGCCATCGTTTTGGGGTCGCTGTTGATGTGTTTAA TGCCTCTCTCATCAAACCTCTGCTTCCCCTCCTCTCATCTTTCGCGCCAC CTCTTTTGCGACGTGACGGACGGCTCATCAAACATGAACCAAATTTCCGT TCCGCGGCTTGAACCGGGCTGAAATCGGGCTGATAAATACCTGCTGGCGG AGTAAACCGGTCGAATTGAACTGAACGCAGAGCCTGGTGCACGAGAACAA CCCGGAGCTGGCGGAGCGGAGCCGCATCACGCTCAAGCCGCCGCAGCTGA TGCGCGTCGGCACGCGCAAGACACTGTGGGTCAACTTCCAGGAGATCTGC AAGCTTATGAAGCGCAACCCAGAACACGTATTCCAGTTCGTCGTAGCGGA GCTCGGCACGGAGGGCTCCATCGACGGCGCCCAGCGGCTGGTGAGAGAAA GGGCGGGGAATAGGCAGTTATGTGGGGGTTTTACGGATTTGGGATATTTT TGTGATGAAGAACTGAAGGTTTTCATCTTGCAGGATCCCTTTCGCTTTTC TCCGATTTGTTCGAGCTTGAAATGGCTTTGGCTGGCAGATTAATCTTGCG CCGTCTCGCTGATTGGAATTTGGCCCAACCTGCGCTACTGTGCAAGACCC GGATATCTGTACTGGGCTAATGATGTTCTTCCACTTGACCCCTTACTCCT CAAACAGGTGCTGCGCGGCAAGTACGTGCCAAAGTACGTGGAGTCGCTGC TGCGCAAGTACATTGTGGAGTACGTCACGTGCCGCATGTGCCGCAGCCCC AGCACCACCCTCACGCGCGAGCCCGCGAGCCGTCTCTTCTTCGTCCACTG TCAGGTGAGATACTTGTAGACGTAGTCTAGGCCTGTTCCGTCTTTCGTAT TTGGTCTCCGCTTCAGGCCGGTCCGTTCTGTCGTATTTGTCTGATTGAAA AAGACCTTTTTCGTTCCGTCGTGGTTGCTAAGGCTTTTGCGATGCACTGC ATCAATCTTTCGTATTTGGTCTCCGCTTCAGGCCGGTCCGTTCTGTCGTA TTTGTCTGATTGAAAAAAACCTTTTTCGTTCCGTCGTGGTTGCTAAGGCT TTTTGCGATGCACTGCATCAAATCCATTATCGCCGTCTGTCTCCCTTTCC CTACTTCTTGAATTTGCAGGACTGCGGATCGAGCCGATCAGTGGGCACCA TCCACTCCGGATTCCACGCGCAGACGCGCGCCGACAGACGCGCGATACGG AATGCCGTCAAGTAAGGAAGAGAGACAGCAGCAGCTCCGCCGGCCCCGCC TCAGGCCCCGCGACTTGGTTCGCGGCCGGTGGCGGTGTCCGGCTGTGGGC GGCGGGGCATCTTGTGGACTGGGATGGTCTTCCGGCGGCGCATTCAGGCG CACAGACAGGAAATATGGGGTCGGGGAGGGCTCCCGCTGCAGCTGGACGG AGGTTCGCAAGGGCAGCCGATGCCATCTTGGGGTTGGCGGAGCAGCTTGG AAAGGTATTGATATAAAACAAGGCAGGACGAAGAAGGCAGTTCTCTGTGT GGATCCACCGAAGCTTTTGTCGTTTCCAATCGTGCTTTTTACATGCGCAT AATGCCAGCCCTCTTAGCTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig8751:215..2184-

>mRNA_P-wetherbeei_contig8751.1.2 ID=mRNA_P-wetherbeei_contig8751.1.2|Name=mRNA_P-wetherbeei_contig8751.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig8751:215..2184- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCAATGTTCGACCTGAGCAAGAAGAAAAAGAAGAAGAAGAAAAAGGA
TGCGGTGGACGCGGGTGAGGAGGGCGGAGACGGGGGGACGGACAAGGCGG
CCAACTACACGTACGAAACGCTGCTCGAGCGCATCCAGAGCCTGGTGCAC
GAGAACAACCCGGAGCTGGCGGAGCGGAGCCGCATCACGCTCAAGCCGCC
GCAGCTGATGCGCGTCGGCACGCGCAAGACACTGTGGGTCAACTTCCAGG
AGATCTGCAAGCTTATGAAGCGCAACCCAGAACACGTATTCCAGTTCGTC
GTAGCGGAGCTCGGCACGGAGGGCTCCATCGACGGCGCCCAGCGGCTGGT
GCTGCGCGGCAAGTACGTGCCAAAGTACGTGGAGTCGCTGCTGCGCAAGT
ACATTGTGGAGTACGTCACGTGCCGCATGTGCCGCAGCCCCAGCACCACC
CTCACGCGCGAGCCCGCGAGCCGTCTCTTCTTCGTCCACTGTCAGGACTG
CGGATCGAGCCGATCAGTGGGCACCATCCACTCCGGATTCCACGCGCAGA
CGCGCGCCGACAGACGCGCGATACGGAATGCCGTCAAGTAA
back to top