mRNA_P-wetherbeei_contig8744.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE) HSP 1 Score: 352 bits (902), Expect = 9.320e-114 Identity = 184/289 (63.67%), Postives = 217/289 (75.09%), Query Frame = 1
Query: 1 DGRMDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVISSGDEMGFSAGGSEG-----------FSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDKGSE 834
DG MDIHSGGVDL+FPHHDNE+AQ+EAKYD QWVNYFLHTGHLHIKGFKMSKSLKNFITIK+AL+E+S RQ+RLL LLHKYN PMDYGDD M+GALA E+ + EFFHNVKAALR+ +D R + E +M S+ A+ EV LCDDFDTP AM ALQE+V+ VNKY++ KE A P+V +R AAEYVT++FK+FG+ S G +GFS GG G SRE L P+L+VL+EFR+ VR GRAGD VLAACD VR+ LLP VGVRLEDKG +
Sbjct: 270 DGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCC--QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQEHSSRQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGGXXXXXXXXXEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQ 556
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA) HSP 1 Score: 325 bits (834), Expect = 7.180e-104 Identity = 164/279 (58.78%), Postives = 207/279 (74.19%), Query Frame = 1
Query: 1 DGRMDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRAL-QEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVISSGDEMGFSAGGSEGFSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDKGSE 834
DG MDIHSGGVDLRFPHHDNE+AQ+EA Y+ QWVNYFLHTGHLHIKGFKMSKSLKNFITIK+AL+ ++ RQ+R+ LLHKYN PMDYGD+TM GALA E+ ++EFFH VK+ +R D LRL E + R ++ + V ALCDDFDTP A++ L ++VR VNKY+ +K A +V+R A EYVTR+FK+FG+++SG +MGF G SRE+A+ P+L+ L+ FR VR RAGD A V++ACD VRD+ LPP+GVRLEDKG +
Sbjct: 263 DGCMDIHSGGVDLRFPHHDNEIAQAEAHYNCA--QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQTHTARQIRMCFLLHKYNDPMDYGDNTMAGALAIERTFVEFFHAVKSVVRAATAVDELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKVFGLVTSGVDMGFDVEQEGGISREEAMGPVLDALSTFRTQVRTCARAGDSAGVISACDQVRDDALPPLGVRLEDKGDQ 539
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A7S3XKM0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM0_HETAK) HSP 1 Score: 284 bits (727), Expect = 1.630e-92 Identity = 153/282 (54.26%), Postives = 199/282 (70.57%), Query Frame = 1
Query: 10 MDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVISSGD-EMGFSA-GGSEGFS----REDALAPLLNVLAEFREAVRAGGRAGD---MAAVLAACDDVRDNLLPPVGVRLEDKG 828
MDIHSGGVDL+FPHHDNE+AQSEA G QWVNYF+HTGHLHIKGFKMSKSLKNFITI++AL ++PRQ+RL+ L+ KYNAPMDYGD TM GAL+ E+ + E+FHNVKA LR+ + A E + R++ A+ VH ALCDDFD P A++ LQ++VR N Y++ A L++R AA+YVT++F+ FG++ G ++GF G +EG +E+ L+P+L+ L FR+ VRA +AG AVL ACD+VRD LPP+GVRLED G
Sbjct: 23 MDIHSGGVDLKFPHHDNEMAQSEAH--AGCRQWVNYFVHTGHLHIKGFKMSKSLKNFITIRQALETHTPRQIRLVFLMSKYNAPMDYGDSTMAGALSIERSFAEYFHNVKAVLRRDGVAGPQKWGAREVALGRALSEAKAGVHAALCDDFDCPSALKELQKLVRASNVYLEGNAAP----ATLLVRAAAQYVTKIFRTFGLVPDGGADIGFPVEGAAEGXXXXXXKEEVLSPVLDALVAFRDRVRAAAKAGGDGAARAVLDACDEVRDMALPPLGVRLEDGG 298
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A7S1XX51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX51_9STRA) HSP 1 Score: 287 bits (735), Expect = 2.610e-92 Identity = 156/282 (55.32%), Postives = 192/282 (68.09%), Query Frame = 1
Query: 1 DGRMDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVISSGDEMGF-----SAGGSEGFSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDKGS 831
DGR+DIHSGGVDL FPHHDNE+AQSEA Y G QWVNYF+H+GHLHIKGFKMSKSLKNFITI AL E S RQ+R L L H+YN PMDYGD TM G L E+ ++EFFHNVKA LR E ++ + +VH ALCDDFDTP ++ L +VR+ N Y K AP V L+++ +A Y+T+MF++FG++ +MGF +AGG G SRE+ L PLL+VL FRE VRA R+GD A VL+ACD +RD L +GVRLED G+
Sbjct: 12 DGRIDIHSGGVDLVFPHHDNEMAQSEAYY--GCRQWVNYFVHSGHLHIKGFKMSKSLKNFITIGAALEEQSSRQLRFLFLKHRYNQPMDYGDATMQGVLDMERTFVEFFHNVKATLRALPATGPQFWRQKEIAFESALLAIKQQVHDALCDDFDTPTVLQILLRLVRITNVY--SKVFEPAPPVPLIIKESARYITKMFRVFGLVEGDADMGFGSEAGAAGG--GASREETLGPLLDVLTAFREKVRAAARSGDSAEVLSACDALRDVDLVELGVRLEDAGA 287
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A7S1FUV2_9STRA (Cysteine--tRNA ligase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUV2_9STRA) HSP 1 Score: 295 bits (754), Expect = 3.700e-92 Identity = 157/277 (56.68%), Postives = 196/277 (70.76%), Query Frame = 1
Query: 4 GRMDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVISSGDEMGFSAGGSEG---FSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDK 825
G MDIHSGG+DL+FPHHDNE+AQ+EA+ +G QWVNYF+H+GHL IK KMSKSLKNFITI++AL+ N+ RQ+R+L LLHKYNAPMDY DDTM A EK + FF NVK ALR Q S + EQ + +DTA+ V AL DDFDT AM ALQ++V+ VNKY++ + AKA +V LV+R+AA YVT MF++FG+IS+G ++GF EG SRED LAP+L+ + EFR R R GD VL CD RD +LP +GVRLEDK
Sbjct: 271 GCMDIHSGGIDLKFPHHDNEMAQAEAQ--SGEKQWVNYFVHSGHLSIKERKMSKSLKNFITIRQALQNNTARQIRMLFLLHKYNAPMDYSDDTMAHATVLEKSFSNFFQNVKVALRSSTIQMSQKWTEHEQDLHNDIDTARYAVRKALLDDFDTATAMTALQDLVKAVNKYLETQGPAKA-IVSLVVRKAAVYVTEMFRVFGLISAGTDIGFPLEEGEGAGAVSREDVLAPVLDAVLEFRAGARDAARTGDAKGVLTKCDAFRDAVLPELGVRLEDK 544
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A6U0T1A9_9STRA (Cysteine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0T1A9_9STRA) HSP 1 Score: 291 bits (744), Expect = 1.190e-90 Identity = 150/276 (54.35%), Postives = 201/276 (72.83%), Query Frame = 1
Query: 7 RMDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVI--SSGDEMGFSAGGS-EGFSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDK 825
RMDIHSGGVDL+FPHHDNE+AQ+EA +G +QWVNYF+H GHLHIKGFKMSKSLKNFITI++AL N+ RQ+RL LLHKYNAPMDYGD+TM+ +L TEK+++EFFHNVKA LR+ + R + S +++ ++ + V AL DDFDTP ++ AL ++V+ N Y+D A + V L+LR AA Y+T +F+IFG+I S+G E+GF GG+ + E+AL P+L+ L +FR +VR R D VL+ CD RD++LP +G+RLEDK
Sbjct: 271 RMDIHSGGVDLKFPHHDNEMAQAEAH--SGCNQWVNYFVHAGHLHIKGFKMSKSLKNFITIRDALENNTARQIRLCFLLHKYNAPMDYGDNTMSHSLVTEKLFVEFFHNVKAVLREGNIINIQRWDESARQLQNTLSDIKSRVDAALRDDFDTPASINALSDLVKATNLYLDSCVARQITPVNLLLRNAAVYITHIFRIFGLIPDSAGGEIGFPIGGAGDAADLEEALTPVLDSLMQFRASVRDFARVKDTGGVLSECDKFRDDVLPVLGIRLEDK 544
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A7S0C423_9STRA (Cysteine--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C423_9STRA) HSP 1 Score: 287 bits (735), Expect = 5.380e-90 Identity = 152/281 (54.09%), Postives = 202/281 (71.89%), Query Frame = 1
Query: 1 DGRMDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAH--QDSLRLEASEQRVMRSVDTA-QDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKA-PMVRLVLRRAAEYVTRMFKIFGVI--SSGDEMGFSAGGSEGFSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDK 825
DGRMDIHSGGVDL+FPHHDNE+AQ+EA +G QWVNYF+H+GHLHI+G KMSKSLKNFITI++AL N+ RQ+R L H+YNAPMDYGD+T+ GA+ TEK ++EFFHNVKAALR D + E+ + + TA +V A DDFDTP + AL ++++ +NKY++ E + ++ LV+RRA +VT++ K+ G+I +SG EMGF G++ +RE+ALAP+L+VL FR VR RA DM VL ACD+ RD+ LPP+G+RLEDK
Sbjct: 198 DGRMDIHSGGVDLKFPHHDNEMAQAEAH--SGCAQWVNYFVHSGHLHIQGLKMSKSLKNFITIRQALEINTARQIRFCFLKHQYNAPMDYGDNTLRGAMDTEKKFVEFFHNVKAALRNAGGLVSDQAQRWGDEEFALDAATTACMKKVDKAFRDDFDTPGVLTALSDLIKDMNKYLEAVEISDTHKVIALVVRRAGLFVTKILKVLGLIPDNSGVEMGFPFDGTDDVNREEALAPILDVLMSFRSTVRDAARAKDMKGVLTACDEFRDDDLPPLGIRLEDK 476
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A7S1Y9A2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9A2_9STRA) HSP 1 Score: 284 bits (727), Expect = 9.150e-90 Identity = 150/275 (54.55%), Postives = 193/275 (70.18%), Query Frame = 1
Query: 7 RMDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVISSGDEMGFSAGGSEG--FSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDK 825
RMDIHSGGVDL+FPHHDNE+AQ+EA +G QWVNYF+H GHLHIKGFKMSKSLKNFITI++AL +NS RQ+RL L+HKYN+PMDYGD+TM+ A+ EK++ EFF N KAALR A +DS + + + + +++ Q V AL DDFDTP M AL ++V+ N YM D + L+L A YVTR+FK+FG+I + DE+GF GG+ G SRE+ L P+L+ L FR VR RA ++ VL CD RD+ LP +G+RLEDK
Sbjct: 125 RMDIHSGGVDLKFPHHDNEMAQAEAH--SGCTQWVNYFVHAGHLHIKGFKMSKSLKNFITIRQALEQNSARQIRLCFLMHKYNSPMDYGDNTMSHAMTAEKLFKEFFLNTKAALRATAMKDSKKWTPATKDLQKTLHQTQAAVDVALKDDFDTPAVMSALADLVKSTNSYMQDNVET---INSLLLNNVAAYVTRIFKVFGLIRT-DEIGFDGGGASGGGASREETLTPVLDSLMAFRSNVRDQARAKNVGGVLEECDRFRDDALPELGIRLEDK 393
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI) HSP 1 Score: 286 bits (732), Expect = 3.730e-89 Identity = 147/279 (52.69%), Postives = 196/279 (70.25%), Query Frame = 1
Query: 4 GRMDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALRKCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVISSGDEMGFS---AGGSEGFSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDKGS 831
G +D+H+GGVDL+FPHH+NE+AQSE D S QW+NY+LHTGHL+IKGFKMSKSLKNFITI++AL E+S RQ+R LLHKYNAPMDYGD TMT A+ EKI+ EFFHNVKA LR+ + + +M+ + ++ V ALCDDFDTP A+ L++++R VNKY++ A VL A Y+T + + FG++ +++GFS +GG ++E+ LAP L+ L +FRE VR GD AAVLAA D +RD++LPP+GVR+EDKGS
Sbjct: 252 GHIDVHAGGVDLKFPHHENEIAQSEGCLD--SHQWINYWLHTGHLNIKGFKMSKSLKNFITIRQALEEHSARQIRFCFLLHKYNAPMDYGDGTMTQAVNMEKIFSEFFHNVKATLRRVGVAGPQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYIESGVVGSA-----VLSSTARYITSVLRTFGLVQDDNDIGFSLESSGGESAGNKEELLAPYLDALTKFRETVRIAAINGDTAAVLAAADCLRDDVLPPLGVRMEDKGS 523
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA) HSP 1 Score: 285 bits (729), Expect = 1.630e-88 Identity = 153/276 (55.43%), Postives = 195/276 (70.65%), Query Frame = 1
Query: 10 MDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMSKSLKNFITIKEALRENSPRQVRLLGLLHKYNAPMDYGDDTMTGALATEKIYMEFFHNVKAALR-KCAHQDSLRLEASEQRVMRSVDTAQDEVHTALCDDFDTPRAMRALQEVVRVVNKYMDDKEAAKAPMVRLVLRRAAEYVTRMFKIFGVISSGDEMGFSA--GGSEGFSREDALAPLLNVLAEFREAVRAGGRAGDMAAVLAACDDVRDNLLPPVGVRLEDKG 828
MDIHSGGVDL+FPHHDNE+AQ+EA + G QWVNYF+H GHLHI+G KMSKSLKNFITI++AL NS RQ+R+L LLHKYNAPMDYGD+T++ A+ EK + EFFHNVKAALR K + R + + +++ Q +V AL DDFDTP AM L ++V+ N Y+ E +V LV+R A Y+T+MFK+FG+I + D +GF G S G +E+ L+P+L+VL FR +VR RAGD A+L CD RD LLPP+GVRLEDKG
Sbjct: 266 MDIHSGGVDLKFPHHDNEMAQAEA--ECGHPQWVNYFVHAGHLHIQGLKMSKSLKNFITIQQALEMNSARQIRMLFLLHKYNAPMDYGDNTLSRAVVAEKSFNEFFHNVKAALRSKDMMEQDQRWTPAAVTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYL---ETETTQVVGLVVRSVASYITKMFKVFGLIPN-DSIGFGLEDGSSGGEGKEEILSPVLDVLMAFRSSVREQARAGDTQAILKLCDKFRDELLPPLGVRLEDKG 535 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8744.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8744.1.1 >prot_P-wetherbeei_contig8744.1.1 ID=prot_P-wetherbeei_contig8744.1.1|Name=mRNA_P-wetherbeei_contig8744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=275bp MDIHSGGVDLRFPHHDNELAQSEAKYDTGSDQWVNYFLHTGHLHIKGFKMback to top mRNA from alignment at P-wetherbeei_contig8744:180..2684- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8744.1.1 ID=mRNA_P-wetherbeei_contig8744.1.1|Name=mRNA_P-wetherbeei_contig8744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2505bp|location=Sequence derived from alignment at P-wetherbeei_contig8744:180..2684- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8744:180..2684- >mRNA_P-wetherbeei_contig8744.1.1 ID=mRNA_P-wetherbeei_contig8744.1.1|Name=mRNA_P-wetherbeei_contig8744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=825bp|location=Sequence derived from alignment at P-wetherbeei_contig8744:180..2684- (Phaeothamnion wetherbeei SAG_119_79)back to top |