mRNA_P-wetherbeei_contig8694.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8694.1.1
Unique NamemRNA_P-wetherbeei_contig8694.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: A0A6I5NDP7_9CYAN (Aminopyrimidine aminohydrolase n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5NDP7_9CYAN)

HSP 1 Score: 112 bits (280), Expect = 1.010e-28
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREKQ----PAPHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSSHAFT 345
            +QDYLFV EF+R A RLL+AAPP DF +++ G++AL  ELAWF   A E+      AP P  E+Y   MR +    YAVQ  AFWAIE  YN+GW+  S    +P+ E   RW +  FT
Sbjct:   43 VQDYLFVVEFTRMAARLLSAAPPADFDVILSGLSALKDELAWFREKAAERSLNLNAAPQPTCEDYCRFMRSLDDQPYAVQATAFWAIELAYNQGWQRHSPMP-DPYAEFADRWGNPGFT 160          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: A0A836CER6_9STRA (TENA/THI-4 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER6_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.070e-28
Identity = 59/121 (48.76%), Postives = 74/121 (61.16%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAARE-----KQPAPHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPF-VECQRRWSSHAFT 345
            LQDYLFV EFSR AGR L+ AP    PL++GG+AAL  EL WF   A+            P N+EY A MR++    Y VQLAA+WAIE VYN+ W+L+    R+P   E Q+RW +  FT
Sbjct:   52 LQDYLFVLEFSRMAGRALSNAPDEHVPLLLGGLAALKEELVWFKYMAQRLGVDLSTAMKKPTNQEYCAFMRELAEHDYTVQLAAYWAIELVYNKAWQLNGKTPRKPLHQELQQRWGNAEFT 172          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: A0A2N6K3F4_FISMU (Aminopyrimidine aminohydrolase n=1 Tax=Fischerella muscicola CCMEE 5323 TaxID=2019572 RepID=A0A2N6K3F4_FISMU)

HSP 1 Score: 109 bits (273), Expect = 1.140e-27
Identity = 57/119 (47.90%), Postives = 69/119 (57.98%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREKQPAPH----PVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSSHAFT 345
            LQDYLFV EF+R  GR+LA+APP  F L++GG+AAL  EL WF   A E+Q   H    P   EY   M  +G   Y VQ  A WAIE  YN+GW+L  G    P+ E   RW +  FT
Sbjct:   43 LQDYLFVVEFTRMLGRVLASAPPHHFELILGGLAALQDELTWFKQKAAERQLNLHTKKQPTCTEYCEYMHSLGTKPYPVQATALWAIELAYNQGWQLP-GEMPAPYKEFANRWGNPGFT 160          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: UPI0019F931A3 (TenA family transcriptional regulator n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019F931A3)

HSP 1 Score: 104 bits (260), Expect = 1.020e-25
Identity = 57/120 (47.50%), Postives = 71/120 (59.17%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREK----QPAPHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSSHAFTG 348
            +QDYLFV +F+R AGRLLAAAP   F L++ G+ AL +EL WF   A E+    Q    P  EEY   M ++    Y VQ  AFWAIE  YN+GW+L  GA   P+ E   RW +  FTG
Sbjct:   42 VQDYLFVIDFTRMAGRLLAAAPVHHFDLILSGMTALRAELNWFRDKADERHLDLQTPKQPTCEEYCRFMHQLATAPYPVQATAFWAIEYAYNQGWQLP-GAMCPPYDEFAYRWGNPDFTG 160          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: A0A2K8T3S7_9NOSO (Aminopyrimidine aminohydrolase n=21 Tax=Nostocales TaxID=1161 RepID=A0A2K8T3S7_9NOSO)

HSP 1 Score: 104 bits (259), Expect = 1.630e-25
Identity = 53/119 (44.54%), Postives = 71/119 (59.66%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREKQP----APHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSSHAFT 345
            +QDYLFV EF+R  GR+LA+APP  F +++GG+AAL  EL WF   A ++Q        P   EY   M+ +    Y VQ  AFWAIE  YN+GW+L  G   +P+ E  +RW +  FT
Sbjct:   43 MQDYLFVVEFTRMVGRVLASAPPEHFDVILGGLAALKDELNWFQEKATQRQLNLNIKKQPTCREYCEYMQSLADKPYPVQATAFWAIELAYNQGWQLP-GKMPDPYNEFAQRWGNTDFT 160          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: A0A0M0SIS8_9CYAN (Aminopyrimidine aminohydrolase n=7 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A0M0SIS8_9CYAN)

HSP 1 Score: 103 bits (258), Expect = 2.040e-25
Identity = 53/119 (44.54%), Postives = 71/119 (59.66%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREKQ----PAPHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSSHAFT 345
            +QDYLFV EF+R  GR+LA+AP   F +++GG+AAL  EL+WF   A ++Q        P  +EY   M  +G+  Y VQ  AFWAIE  YN+GW+L  G    P+ E   RW +  FT
Sbjct:   43 VQDYLFVVEFTRMVGRVLASAPLHHFDVILGGLAALQDELSWFKQKAAQRQLNLDTKRQPKCQEYCEYMHSLGSKPYPVQATAFWAIELAYNQGWQLP-GEMPVPYNEFANRWGNPGFT 160          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: UPI00187E2CE2 (TenA family transcriptional regulator n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI00187E2CE2)

HSP 1 Score: 102 bits (255), Expect = 5.870e-25
Identity = 54/119 (45.38%), Postives = 69/119 (57.98%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREKQ----PAPHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSSHAFT 345
            +QDYLFV EF+R AGRLLA+APP  F +++ G++AL  EL WF   A  +Q            EY   M  +GA  Y VQ  AFW IE  YN+GW+L  G   EP+ E   RW + +FT
Sbjct:   43 VQDYLFVLEFTRMAGRLLASAPPEHFDVILSGLSALKDELNWFKEKAANRQLDLGTQKQSTCAEYCDFMHSLGAMPYPVQATAFWTIELAYNQGWQLP-GQMLEPYNEFADRWGNPSFT 160          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: A0A0N8KMM9_9CYAN (Aminopyrimidine aminohydrolase n=1 Tax=Phormidesmis priestleyi Ana TaxID=1666911 RepID=A0A0N8KMM9_9CYAN)

HSP 1 Score: 102 bits (255), Expect = 6.020e-25
Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREK----QPAPHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSSHAFT 345
            +QDYLFV EF+R AGRLLAAAP   F  ++GG+  +  EL WF + A+E+      A  P  + Y   M+ +  ++YAVQ  AFWAIER YN+GW+  S    EP+ E   RW +  FT
Sbjct:   44 VQDYLFVIEFTRFAGRLLAAAPVAHFDTLLGGLTVIKDELQWFESKAQERGLAMPAAMQPTCQAYCLFMQGLMRESYAVQAVAFWAIERAYNQGWQGHSPMP-EPYTEFGDRWGNERFT 161          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: UPI00168931A7 (TenA family transcriptional regulator n=1 Tax=Nostoc sp. FACHB-973 TaxID=2692844 RepID=UPI00168931A7)

HSP 1 Score: 99.0 bits (245), Expect = 6.940e-24
Identity = 51/115 (44.35%), Postives = 66/115 (57.39%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREKQP----APHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSS 333
            +QDYLFV EF+R  GR+LA+APP  F +++GG+AAL  EL WF   A ++Q        P   EY   M       Y VQ  AFWAIE  YN+GW+L  G    P+ E  +RW +
Sbjct:   43 MQDYLFVVEFTRMVGRVLASAPPEHFDVILGGLAALKDELNWFKEKATQRQLDLNIKKQPTCREYCEYMHSFADKPYPVQATAFWAIELAYNQGWQLP-GKMPAPYDEFAQRWGN 156          
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Match: A0A1Z3HLE8_9CYAN (Aminopyrimidine aminohydrolase n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HLE8_9CYAN)

HSP 1 Score: 99.8 bits (247), Expect = 9.050e-24
Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 1
Query:    1 LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREKQ---PAPHPVN-EEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAAREPFVECQRRWSSHAFT 345
            +QDYLFVQEF+R   R+L AAP   FP+++ G+AAL  ELAWF   A E+Q     P     ++Y   M  +    Y VQ+ A WAIE  YN+GW+L  G   EP+ E   RW +  FT
Sbjct:   43 VQDYLFVQEFTRMLARVLGAAPFHHFPVLLNGLAALKEELAWFELKATERQLELDVPQQSTCQQYGEFMASLCTTPYPVQVTALWAIEYAYNQGWQLP-GPMPEPYAEFAARWGNPGFT 160          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8694.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I5NDP7_9CYAN1.010e-2847.90Aminopyrimidine aminohydrolase n=1 Tax=Leptolyngby... [more]
A0A836CER6_9STRA1.070e-2848.76TENA/THI-4 family n=1 Tax=Tribonema minus TaxID=30... [more]
A0A2N6K3F4_FISMU1.140e-2747.90Aminopyrimidine aminohydrolase n=1 Tax=Fischerella... [more]
UPI0019F931A31.020e-2547.50TenA family transcriptional regulator n=1 Tax=Syne... [more]
A0A2K8T3S7_9NOSO1.630e-2544.54Aminopyrimidine aminohydrolase n=21 Tax=Nostocales... [more]
A0A0M0SIS8_9CYAN2.040e-2544.54Aminopyrimidine aminohydrolase n=7 Tax=Hapalosipho... [more]
UPI00187E2CE25.870e-2545.38TenA family transcriptional regulator n=1 Tax=uncl... [more]
A0A0N8KMM9_9CYAN6.020e-2545.38Aminopyrimidine aminohydrolase n=1 Tax=Phormidesmi... [more]
UPI00168931A76.940e-2444.35TenA family transcriptional regulator n=1 Tax=Nost... [more]
A0A1Z3HLE8_9CYAN9.050e-2444.54Aminopyrimidine aminohydrolase n=1 Tax=Halomicrone... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8694contigP-wetherbeei_contig8694:1420..2377 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog306281.AJLK01000097_gene3994
PFAMsTENA_THI-4
Model size351
Max annot lvl1117|Cyanobacteria
KEGG rclassRC00197,RC02832
KEGG koko:K20896
KEGG ReactionR09993,R11313
KEGG Pathwayko00730,ko01100,map00730,map01100
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.87e-28
EggNOG OGsCOG0819@1|root,COG0819@2|Bacteria,1G492@1117|Cyanobacteria,1JKTD@1189|Stigonemataceae
DescriptionTENA/THI-4/PQQC family
Cds size351
COG categoryK
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187054.6676917-CDS-P-wetherbeei_contig8694:1419..15421683187054.6676917-CDS-P-wetherbeei_contig8694:1419..1542Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8694 1420..1542 -
1683187054.681317-CDS-P-wetherbeei_contig8694:1933..20281683187054.681317-CDS-P-wetherbeei_contig8694:1933..2028Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8694 1934..2028 -
1683187054.6935372-CDS-P-wetherbeei_contig8694:2244..23771683187054.6935372-CDS-P-wetherbeei_contig8694:2244..2377Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8694 2245..2377 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8694.1.1prot_P-wetherbeei_contig8694.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8694 1420..2377 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8694.1.1

>prot_P-wetherbeei_contig8694.1.1 ID=prot_P-wetherbeei_contig8694.1.1|Name=mRNA_P-wetherbeei_contig8694.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp
LQDYLFVQEFSRTAGRLLAAAPPRDFPLVMGGIAALDSELAWFSAAAREK
QPAPHPVNEEYWALMRKIGADTYAVQLAAFWAIERVYNEGWRLSSGAARE
PFVECQRRWSSHAFTG*
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mRNA from alignment at P-wetherbeei_contig8694:1420..2377-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8694.1.1 ID=mRNA_P-wetherbeei_contig8694.1.1|Name=mRNA_P-wetherbeei_contig8694.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=958bp|location=Sequence derived from alignment at P-wetherbeei_contig8694:1420..2377- (Phaeothamnion wetherbeei SAG_119_79)
CTACAGGACTATCTGTTCGTGCAGGAGTTTTCGCGGACGGCCGGGCGGCT GCTCGCGGCGGCGCCGCCCCGCGACTTCCCGCTGGTGATGGGCGGCATCG CCGCGCTCGACTCCGAGCTCGCCTGGTTTTCCGGTCTCGCCTCCCGCCGT GGGCTGATTCTCGGCGGCAGCGACGGCAGCGGTAACGGCGGTGATAACCG CAACGGCGGCGACGGCGGTATTGACAGTGACGGAAGCGGAAAGGACGAAG CAGAGAGAAGAGAAGGCGGAAGCACCGGAGATGCTGTGACGACGAAGTCA GCGCCTTCGGATTCGGCGGCCGTTACGGCAGCCGTTACCGTGGCGGCAGC GGCGGCACGGGAAAAGCAGCCGGCGCCTCACCCGGTGAACGAGGAATACT GGGCGCTCATGAGAAAGATCGGAGCGGACACCTACGCTGTCCAGGTCCAT GCCTCTTTTTTTGCATTCTGAATGTTTTGCGTCCGTTGCGCTTTCTTTCA TATCCTTTTCTGTTTGTTTTCTCCTTTTTCTGGTCGCCATTTGCGTTGTT GTCGTCCAGTCACAGTTGTTTTACTTTTCTTCGCCCCATATCTTACTTCG CCGTGTTCGCCAGCAGTGATGGGATTTCTTGGCGAGAAGAAGCGAAGATG GCACTTCCCCCTCCTTCGGGCGGGCTCCCTTCATTTCACGTGCCCACATT CCTCCTTTTGCCCCGTCGCCGCTTTTTTGGGGGGGGGGGGGGTGGGCATC ACGAGCTTCTAATTCGGCTTGGTTTAAGTGAACACCATTTCTCTTCGGCA TGGCTCCTGTTCGATTCTCTTCAATTCGTTCTCAGCTGGCGGCGTTCTGG GCGATCGAGCGCGTCTACAACGAGGGGTGGCGGCTGAGCAGCGGCGCGGC GCGCGAGCCATTCGTCGAGTGCCAGCGGCGGTGGAGCAGCCACGCCTTCA CTGGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8694:1420..2377-

>mRNA_P-wetherbeei_contig8694.1.1 ID=mRNA_P-wetherbeei_contig8694.1.1|Name=mRNA_P-wetherbeei_contig8694.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig8694:1420..2377- (Phaeothamnion wetherbeei SAG_119_79)
CTACAGGACTATCTGTTCGTGCAGGAGTTTTCGCGGACGGCCGGGCGGCT
GCTCGCGGCGGCGCCGCCCCGCGACTTCCCGCTGGTGATGGGCGGCATCG
CCGCGCTCGACTCCGAGCTCGCCTGGTTTTCCGCGGCGGCACGGGAAAAG
CAGCCGGCGCCTCACCCGGTGAACGAGGAATACTGGGCGCTCATGAGAAA
GATCGGAGCGGACACCTACGCTGTCCAGCTGGCGGCGTTCTGGGCGATCG
AGCGCGTCTACAACGAGGGGTGGCGGCTGAGCAGCGGCGCGGCGCGCGAG
CCATTCGTCGAGTGCCAGCGGCGGTGGAGCAGCCACGCCTTCACTGGGTG
A
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