mRNA_P-wetherbeei_contig8692.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F) HSP 1 Score: 148 bits (374), Expect = 1.980e-41 Identity = 82/161 (50.93%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 1 KYLKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPL 483
+YL GT+ GLLY ++ T +GY DADWA +LD+R+SV ++F SGAA+SW SK Q V ST EAEY+A A AAQ AVW+R+L S L + AT+++EDN+S I +A N R KHIDIK H +R++VASGA+ L K D +AD+LTK L
Sbjct: 72 RYLNGTQPLGLLYSKN---TEKECIGYSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGL 229
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A151QYP0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QYP0_CAJCA) HSP 1 Score: 147 bits (372), Expect = 9.120e-40 Identity = 76/175 (43.43%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 1 KYLKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRRKILG 525
+Y+KGT GL + + + + +GY D+DW ++D+R+S +VF +A +W SK Q VA STCEAEYVAA+++ QHAVWLR L S L + + L+ DNRS I LA N + R KHID++FH +RE+V G++ L + + +Q+ D+ TKPLP + LR K+LG
Sbjct: 202 RYVKGTMSLGLCFTK---SDNYRLIGYSDSDWCGDVDDRKSTAGYVFFMGNSAFTWLSKKQPIVALSTCEAEYVAASWSVQHAVWLRNLLSKLEIMKAEKVLIRVDNRSAIELAKNPINHERSKHIDVRFHFIREKVKEGSVELEHVGSKEQVTDIFTKPLPTTTFQKLR-KLLG 372
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A182GP81_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GP81_AEDAL) HSP 1 Score: 141 bits (356), Expect = 9.830e-40 Identity = 77/171 (45.03%), Postives = 109/171 (63.74%), Query Frame = 1
Query: 7 LKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRRKI 519
++GT+ LL+RRDA +S GY DADWA + ++R+SV ++F G ++SWCSK Q VA S+ EAEYVA + +WL+ + L E + ++EDNR CI +A N F R KHIDIK+H +R+ VASG++ + PI+ DQLAD+ TKPL R +TLR +
Sbjct: 1 MQGTKDTKLLFRRDA--SSSPLTGYADADWASDTNDRKSVSGYLFQVFGCSVSWCSKKQPTVATSSSEAEYVALS------IWLQGILEDLQ-ETAKPVTIYEDNRGCICMAKN-FETKRTKHIDIKYHFLRDHVASGSLNIEPIRTQDQLADIFTKPLEFSRFKTLRTNL 161
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A0L6WK95_9AGAR (Copia protein n=1 Tax=Termitomyces sp. J132 TaxID=1306850 RepID=A0A0L6WK95_9AGAR) HSP 1 Score: 142 bits (359), Expect = 2.570e-39 Identity = 77/157 (49.04%), Postives = 101/157 (64.33%), Query Frame = 1
Query: 55 TTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRRKILG 525
T+ + VG+ D+DWA LD RRS+G + + ISW S+ Q VAAS+CEAEY+AA AAQ +WLR L +G ++S AT + DN + L+ N RVKH+DIK+H +RERVAS +T+ I D +ADL TKPLP+PR LRR ILG
Sbjct: 78 TSPVSLVGFTDSDWANCLDTRRSMGRYAWSLGSGVISWASRKQKTVAASSCEAEYMAAFEAAQECIWLRALLQAIGHDLSKATTIMCDNNAATNLSENPLLYSRVKHVDIKYHFLRERVASNELTIRYINTRDNIADLFTKPLPLPRFSRLRR-ILG 233
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A151R5Z5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R5Z5_CAJCA) HSP 1 Score: 143 bits (360), Expect = 2.870e-39 Identity = 75/175 (42.86%), Postives = 108/175 (61.71%), Query Frame = 1
Query: 1 KYLKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRRKILG 525
+Y+KGT GL + + + + +GY D+DW ++D+R+S +VF A +W SK Q VA STCEAEYVAA+++ QHAVWLR L L + + L+ DNRS I LA N + R KHID +FH +RE+V G++ L + + +Q+ D+ TKPLP + LR K+LG
Sbjct: 75 RYVKGTMSLGLCFTK---SDNYRLIGYSDSDWCGDVDDRKSTTGYVFFLGNTAFTWLSKKQPIVALSTCEAEYVAASWSVQHAVWLRNLLRKLEIMKAEKVLIRVDNRSAIELAKNSINHERSKHIDFRFHFIREKVKEGSVELEHVGSKEQVTDIFTKPLPATTFQELR-KLLG 245
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A6S7FTR6_PARCT (Uncharacterized protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FTR6_PARCT) HSP 1 Score: 139 bits (351), Expect = 5.780e-39 Identity = 83/166 (50.00%), Postives = 103/166 (62.05%), Query Frame = 1
Query: 28 GLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRRKILG 525
GLLY TTS VGY DADWA +LD+R+S +VF S AAISW SK Q CVA ST EAEY+A A A Q AVWL++L S L E + L+ EDN++ I +A N R KHIDIK+H +RE VAS A+ L + +AD+ TK L + T RK+LG
Sbjct: 2 GLLYDGSKTTTS--CVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSEPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSMV---TKLRKMLG 162
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A0S3TD48_PHAAN (Uncharacterized protein n=1 Tax=Vigna angularis var. angularis TaxID=157739 RepID=A0A0S3TD48_PHAAN) HSP 1 Score: 140 bits (354), Expect = 6.330e-39 Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 1
Query: 1 KYLKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRRKI 519
+Y+KGT GLLY + GY D+DW ++D+R+S +VF A +W SK Q V STCEAEYVAA+++ +HA+WLR L L + L+ DNRS I LA N + R KHID++FH +RE++ G++ L +++ Q+AD+ TKPLP + LR+ I
Sbjct: 27 RYVKGTMSFGLLYTN---SDHYRLSGYSDSDWCGDIDDRKSTTGYVFFMGDTAFTWLSKKQPIVTLSTCEAEYVAASWSVRHAIWLRNLLQSLEIMQEEKVLIRVDNRSAIELAKNPVNHERSKHIDVRFHFIREKLKEGSVELEHVESKKQIADIFTKPLPTRSFQDLRKLI 196
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 150 bits (378), Expect = 6.520e-39 Identity = 88/175 (50.29%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 1 KYLKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRRKILG 525
+YL GTR GLLY TTS VGY DADWA +LD+R+S +VF S AAISW SK Q CVA ST EAEY+A A A Q AVWL++L S L + + L+ EDN++ I +A N R KHIDIK+H +RE VAS A+ L + +AD+ TK L V + LR K+LG
Sbjct: 321 RYLNGTRDMGLLYDGSKTTTS--CVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLR-KMLG 492
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 148 bits (374), Expect = 1.690e-38 Identity = 87/175 (49.71%), Postives = 109/175 (62.29%), Query Frame = 1
Query: 1 KYLKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRRKILG 525
+YL GTR GLLY TTS VGY DADWA +LD+R+S +VF S AAISW SK Q CVA ST EAEY+ A A Q AVWL++L S L + + L+ EDN++ I +A N R KHIDIK+H +RE VAS A+ L + +AD+ TK L V + LR K+LG
Sbjct: 469 RYLNGTRDMGLLYDGSKTTTS--CVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLR-KMLG 640
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Match: A0A2G8KMC7_STIJA (Putative Gag-pol polyprotein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KMC7_STIJA) HSP 1 Score: 142 bits (359), Expect = 2.700e-38 Identity = 81/171 (47.37%), Postives = 107/171 (62.57%), Query Frame = 1
Query: 1 KYLKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSGAAISWCSKLQDCVAASTCEAEYVAAAYAAQHAVWLRRLASCLGLEVS*ATLLHEDNRSCIALANNVFSEHRVKHIDIKFHIVRERVASGAITLVPIKAVDQLADLLTKPLPVPRTRTLRR 513
+YL+GT GLLY +D S +GY DADWA ++++R+S ++F SGAA+SW SK Q CVA ST EAEY+A A AAQ AVWL+RL + L + + + EDN+S I +A N R KHI+IK+H +RE V G I L+ D +ADLLTK L R LR+
Sbjct: 155 RYLRGTINYGLLYTKDG---SNECIGYSDADWAGDVNDRKSTSGYLFQVSGAAVSWKSKKQTCVALSTAEAEYIALASAAQEAVWLQRLNTDLQNKPNKPLRILEDNQSAICMAKNPQFHGRTKHIEIKYHFIRETVEHGTIELMYCPTEDMVADLLTKGLSKQRFEKLRQ 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8692.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8692.1.1 >prot_P-wetherbeei_contig8692.1.1 ID=prot_P-wetherbeei_contig8692.1.1|Name=mRNA_P-wetherbeei_contig8692.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp KYLKGTRGKGLLYRRDAPTTSGAAVGYVDADWARNLDNRRSVGAHVFLRSback to top mRNA from alignment at P-wetherbeei_contig8692:14..547+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8692.1.1 ID=mRNA_P-wetherbeei_contig8692.1.1|Name=mRNA_P-wetherbeei_contig8692.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig8692:14..547+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8692:14..547+ >mRNA_P-wetherbeei_contig8692.1.1 ID=mRNA_P-wetherbeei_contig8692.1.1|Name=mRNA_P-wetherbeei_contig8692.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig8692:14..547+ (Phaeothamnion wetherbeei SAG_119_79)back to top |