mRNA_P-wetherbeei_contig8691.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 228 bits (581), Expect = 4.060e-65 Identity = 123/231 (53.25%), Postives = 153/231 (66.23%), Query Frame = 1
Query: 1 VWMYVIQEMEDAVVDSLSGNRTNNDAPVQAWDEAWAFYAGSQENTD--GSGEGDLLYSLADKRRTNVSTGTGDDDGDDSTGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNA-ASVTDGCVAMKASLETVYECLGITCANAGGLLADDGGYVAGFEPCQDA 684
+WMYV E+ DAV D +G+ + ND AWDE WAFYAGS E TD G+G+G +LY+LA+KR N T TGD DG D+TG SA+N+ L L + G A L AE C+E I +++ LM V L+QG LRY Y ADPA G GDK +ELWAF A++LP + CDA V K+ +N +G+A A + DG A+KA LETVY C+GITCA GGLL D G Y A FEPC DA
Sbjct: 159 IWMYVTHELYDAVGDCENGDLSANDGGPHAWDEGWAFYAGSLEGTDVGGTGDGQMLYALAEKRCENFGTCTGDSDGSDTTGVSAINSELLTLWETGQASLLAEE--CTEASAVIDQILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISTCDAAVGTKVRDNTELGSASAPMADGYAAIKAELETVYSCMGITCAQVGGLLDDTGAYYADFEPCVDA 387
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 204 bits (519), Expect = 2.840e-60 Identity = 113/231 (48.92%), Postives = 151/231 (65.37%), Query Frame = 1
Query: 1 VWMYVIQEMEDAVVDSLSGNRTNNDAPVQAWDEAWAFYAGSQENTDGSGEGDLLYSLADKRRTNVSTGTGDDDGDDSTGTSAVNAAALELSQQGHADL-NAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNA-ASVTDGCVAMKASLETVYECLGITCANAGGL-LADDGGYVAGFEPCQDA 684
VWMYVI E+EDA+ D GN ND AWDE W FYAGS E T+G+G+G +LY+LA+KR N +T T DDDG D TGT+ VN+ LEL ++G L + + +++ K+++LM V LVQG LRY Y ADP G+ GDKA +ELWAF AA+LPR+ CD VA + N I +A A +++G V +K LE+VY C+GI+C+ GGL + + Y GFEPC D+
Sbjct: 150 VWMYVIHELEDAIEDCDIGNLNANDGGPHAWDEGWGFYAGSLEGTEGTGDGVMLYALAEKRCENFATCTADDDGSDITGTAQVNSDMLELYKEGQVYLLDGDCGAAGDVKD---KIIDLMGVPLVQGMLRYFYNADPEAGDGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLKEQLESVYSCMGISCSQVGGLVIGESTTYYDGFEPCGDS 377
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 207 bits (528), Expect = 5.290e-60 Identity = 116/240 (48.33%), Postives = 146/240 (60.83%), Query Frame = 1
Query: 1 VWMYVIQEMEDAVVDS---------LSGNRTNNDAPVQAWDEAWAFYAGSQENT--DGSGEGDLLYSLADKRRTNVSTGTGDDDGDDSTGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNA-ASVTDGCVAMKASLETVYECLGITCANAGGLLADDGGYVAGFEPCQDA 684
VWMYV E+ DAV D G+ + ND AWDE WAFY GS E T GSG+G +LY+LA+KR N T TGD DG D+TG SA+N+ L+L + G A+L A C++ I +++ LM V L+QG LRY Y ADPA G GDK +ELWAF AA+LP + CD V + +N +G A A + DG A+K LE+VY C+GITCA GGLL D G Y FEPC D+
Sbjct: 314 VWMYVTHELYDAVEDCEIGGGCVKVAEGDLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLDLWEDGKANLLAGQ--CTQASAVIDEILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTAVRDNTELGGASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLDDTGAYYTNFEPCTDS 551
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 206 bits (524), Expect = 5.310e-59 Identity = 110/229 (48.03%), Postives = 142/229 (62.01%), Query Frame = 1
Query: 1 VWMYVIQEMEDAVVDSLSGNRTNNDAPVQAWDEAWAFYAGSQENTDGSGEGDLLYSLADKRRTNVSTGTGDDDGDDSTGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNAASVTDGCVAMKASLETVYECLGITCANAGGLLAD--DGGYVAGFEPCQD 681
VWMYVI EMEDA+ D ++ + T NDA V AWDEA AFY GS T G+G G+LLY+LA KR N T TGD+DG+D GT+AVN QG +L C ++ +V+ MT+ L+QG +RYLY+ADPAGGN G+KA +ELWAF AA+LPR+ CD A L NAYI N + +KA++E+ Y CLGITC + GGL + Y +PC +
Sbjct: 23 VWMYVIHEMEDAINDCVADDLTTNDAAVVAWDEAVAFYTGSLVGTTGTGSGNLLYTLAQKRCANFGTCTGDNDGNDFEGTAAVNEKVFNFFDQGIVELQIGE--CQDVIKIKDNIVDQMTIPLIQGVMRYLYWADPAGGNGGNKAHAELWAFAAAILPRISLCDTGAASILRSNAYILNTPMGQNSRATVKAAIESTYTCLGITCDDIGGLFVEGSSSNYYPSMQPCSE 249
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: A0A7S2UVU0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVU0_9STRA) HSP 1 Score: 193 bits (490), Expect = 8.110e-58 Identity = 113/217 (52.07%), Postives = 140/217 (64.52%), Query Frame = 1
Query: 43 DSLSGNRTNNDAPVQAWDEAWAFYAGSQENTDGSGEGDLLYSLADKRRTNVSTGTGDDDGDDS-TGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNAASVTDGCVAMKASLETVYECLGITCANAGGLLADDGG---YVAGFEPCQD 681
D S + T+ND V AWDEA AFY GS E DG G G+LLYSLADKR N T TGD ++ +GTSAVN + L ++G +L+ C + +V+ MT+ LVQGTLRYLY ADP G NEG+KAR+ELWAF AA+LPRV CDA VA L EN+YIGN + DG +K +LE Y CLG C++ GG++ DGG YV+G EPC D
Sbjct: 2 DCKSSDLTDNDNGVVAWDEAVAFYTGSLEGVDGKGNGNLLYSLADKRCANFGTCTGDVGNSNAISGTSAVNERVMNLFREGQVNLHNGD--CGHVEEVKGAIVDQMTIPLVQGTLRYLYKADPKGANEGNKARAELWAFAAAILPRVDKCDAGVATMLRENSYIGN-DPMKDGFKTVKEALEKTYSCLGFKCSDVGGIV--DGGAGQYVSGMEPCVD 213
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: A0A7R9Y8Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q2_9STRA) HSP 1 Score: 189 bits (480), Expect = 2.660e-52 Identity = 116/240 (48.33%), Postives = 147/240 (61.25%), Query Frame = 1
Query: 4 WMYVIQEMEDAVVDSLSGNRTNNDAP-VQAWDEAWAFYAGSQENTDGSGEGDLLYSLADKRRTNVSTGTGDDDGDDSTGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGN------EGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYI--GNAASVTDGCVAMKASLETVYECLGITCANAGGLLAD--DG--GYVAGFEPCQDA 684
WMYVI E+EDAV+D +G NN+ P V AWDE WAFYAGS E DG+G G +Y+LA+KR N T TGDDDGD STG SAVNA L L Q+G LNA C+ + ++V MTV L+QG LRY Y AD + G E + ++E WAF AAV+P++ CDA +A ++ N GN + V DG + A ++ Y CLGITCA+ GG L+ DG YV+G PC DA
Sbjct: 470 WMYVIHELEDAVLDCQAGTPMNNEDPAVHAWDEGWAFYAGSLE--DGTGSGVQVYALAEKRCANFFTCTGDDDGDASTGRSAVNAELLSLYQEGQLALNAGN--CNGAALVVREIVKQMTVPLIQGVLRYAYLADQSIGGVQATPEEWEDDQAEGWAFTAAVMPQLDACDAALAAEIRANMEFVQGNTSPVQDGYEVVYAKMQRFYSCLGITCADVGGYLSSVTDGVPTYVSGAGPCVDA 705
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: A0A7S1IQR3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQR3_9EUGL) HSP 1 Score: 179 bits (454), Expect = 1.150e-48 Identity = 104/226 (46.02%), Postives = 132/226 (58.41%), Query Frame = 1
Query: 4 WMYVIQEMEDAVVDSLSGNRTNNDAPVQAWDEAWAFYAGSQENTDGSGEGDLLYSLADKRRTNVSTGTGDDDGDDSTGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNAASVTDGCVAMKASLETVYECLGITCANAGGLLADDGGYVAGFEPCQD 681
WMYV+ EMEDA+ D +G +ND V AWDEAWAFYAGS E DGSG G Y+LADKR + T T ++G SA+N L L Q G A L A C++ R + + M V LVQG LRY + ADP G G K +E WAF +LP+V C A + N I +A+ V+ G A+K +LE+VY CLGITC + GG+L + Y AG EPC+D
Sbjct: 475 WMYVVVEMEDAIQDCTAGLLADNDKGVHAWDEAWAFYAGSLEGADGSGSGVQPYALADKRCVDFGTCT-------ASGGSAINRDILALFQDGLALLRAGK--CTDARSVMTAITRKMAVPLVQGVLRYAWKADPVNGVSGPKEIAEGWAFTRGILPQVQQCSVAAATTVRNNMDIASASPVSGGFAAVKQALESVYPCLGITCGDVGGVL-NGASYYAGMEPCRD 690
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 171 bits (433), Expect = 2.430e-45 Identity = 112/231 (48.48%), Postives = 134/231 (58.01%), Query Frame = 1
Query: 1 VWMYVIQEMEDAVVDSLSGNRTNNDAPVQAWDEAWAFYAGSQENTDGSGEGD--LLYSLADKRRTNVSTGTGDDDGDDSTGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGD-KARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNA-ASVTDGCVAMKASLETVYECLGITCANAGGLLADDG--GYVAGFEPC 675
VWMYVI EME+AV G+ D WDEAWAFYAGS E G+ +GD +LY+LA KR N T G D TGT+A+N LEL G L C+E +V LMTV LVQ TLRYLY ADPA +GD K +ELWAF AA+LP + C A VA + N+ I + A V+ G VA+K LE++Y CLG+TC GGLLA D YV G EPC
Sbjct: 151 VWMYVIHEMENAVGACNRGDNGAADGGPHYWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGG---ADGITGTAAINDDILELIGAGSGYLLEGK--CAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPC 376
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: A0A7S1Y3V3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y3V3_9STRA) HSP 1 Score: 161 bits (407), Expect = 5.120e-45 Identity = 104/230 (45.22%), Postives = 131/230 (56.96%), Query Frame = 1
Query: 1 VWMYVIQEMEDAVVDSLSGNRTNNDAPVQAWDEAWAFYAGSQENTDGSGEGDLLYSLADKRRTNVSTGTGDDDGDDSTGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNAASVTDGCVAMKASLETVYECLGITCANAGGLLADDGG--YVAGFEPCQDA 684
VWMYVI+E EDA+ D + G T+ND PV AWDE AFYAGS E GS +G + Y LA+KR N T + GD+ TGTS VN L L QG D+ C E R ++V LMTV L+QGTLRY Y + + +K R+E F AAVLP V C A AE++YE +G + V K + E Y+C+GITC+ GGL DDG Y G PC+D+
Sbjct: 14 VWMYVIREFEDALDDCVEGRITDNDDPVHAWDEGVAFYAGSLEGPSGSDDGVMPYRLAEKRCQNFKTCG--EKGDELTGTSYVNIELLRLFDQGQNDILTGQ--CGEARKKKERIVELMTVPLIQGTLRYAYRSAALPTLDTEKGRAEGSTFAAAVLPIVAKCSARDAERIYEEMKVGGGGATEYDNV--KYAFERNYKCMGITCSQVGGLW-DDGEQRYYDGAHPCKDS 236
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Match: A0A6T1L9M0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1L9M0_9DINO) HSP 1 Score: 159 bits (401), Expect = 5.700e-42 Identity = 102/229 (44.54%), Postives = 127/229 (55.46%), Query Frame = 1
Query: 1 VWMYVIQEMEDAVVDSLSGNRTNNDAPVQAWDEAWAFYAGSQENTDGSGEGDLLYSLADKRRTNV----STGTGDDDGDDSTGTSAVNAAALELSQQGHADLNAEPPLCSEIRFTIYKMVNLMTVSLVQGTLRYLYFADPAGGNEGDKARSELWAFVAAVLPRVGFCDATVAEKLYENAYIGNAASVTDGCVAMKASLETVYECLGITCANAGGLLADDGGYVAGFEPC 675
VWMYVI+EMEDA++D SG ND PV AWDEA AFY+GS E GS G LLY LA KR N STGTG VNA +E +G L C E+ ++V LM+V LVQG+LRY Y D G G K R+E F AAVLPRV CD A+ + +N + ++ G A+KA+ E+ Y CLG+TC + GGL+ + AG EPC
Sbjct: 269 VWMYVIREMEDAIMDCQSGCLNCNDDPVHAWDEAVAFYSGSLEGPAGSSSGKLLYRLAVKRCGNFGTCGSTGTG------------VNALIMEQFTRGKNKLLQSK--CVEVVPIKRRIVELMSVPLVQGSLRYAYKVDKLQG--GSKERAEGDVFSAAVLPRVAACDVGAAQTISDNLAYAATSPMSSGFAAVKAAFESTYACLGVTCEDIGGLIRAGNDHYAGAEPC 481 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8691.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8691.1.1 >prot_P-wetherbeei_contig8691.1.1 ID=prot_P-wetherbeei_contig8691.1.1|Name=mRNA_P-wetherbeei_contig8691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp MYVIQEMEDAVVDSLSGNRTNNDAPVQAWDEAWAFYAGSQENTDGSGEGDback to top mRNA from alignment at P-wetherbeei_contig8691:505..1659- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8691.1.1 ID=mRNA_P-wetherbeei_contig8691.1.1|Name=mRNA_P-wetherbeei_contig8691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1155bp|location=Sequence derived from alignment at P-wetherbeei_contig8691:505..1659- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8691:505..1659- >mRNA_P-wetherbeei_contig8691.1.1 ID=mRNA_P-wetherbeei_contig8691.1.1|Name=mRNA_P-wetherbeei_contig8691.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig8691:505..1659- (Phaeothamnion wetherbeei SAG_119_79)back to top |