mRNA_P-wetherbeei_contig869.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig869.1.1
Unique NamemRNA_P-wetherbeei_contig869.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: A0A6H5J9X5_9PHAE (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J9X5_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 9.410e-19
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 1
Query:    1 GKVVNLRVPLLAVVAYDDPIMAVERTPVAAALESEDLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDY 213
            GK+  LR P LAV + DDPIM  + +P+A     ++L ILLT+ GGHVGWPTGW P+RN++ W+S   LD+
Sbjct:  466 GKIAGLRTPTLAVTSLDDPIMTADGSPIAEVDTIKNLFILLTRNGGHVGWPTGWNPNRNRWGWMSTTSLDF 536          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: A0A7S1D7A6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7A6_CYCTE)

HSP 1 Score: 75.1 bits (183), Expect = 4.940e-16
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 1
Query:    1 GKVVNLRVPLLAVVAYDDPIMAVERTPVAAALE------------SEDLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDYS 216
            G++ ++ VPL  + A DDP+++ E     AA E            S +LM+LLTKRGGHVGWP GW PS NK+ W++GVVL ++
Sbjct:    7 GRIEDVSVPLCVLSALDDPLLSWENV---AANEGYMHPSNLSKSGSGNLMLLLTKRGGHVGWPMGWNPSANKWAWMNGVVLTFA 87          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: A0A7S4ADV3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ADV3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 9.600e-15
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 1
Query:   13 NLRVPLLAVVAYDDPIMAVERTPVAAALESEDLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDYS 216
            N R+PLLAV A DDPI   E T      +++++M+L TK GGH+GWPTGW PS+N++K++  + ++Y+
Sbjct:  264 NTRIPLLAVHAIDDPITIYEVTLAEHVDQTDNVMLLATKHGGHIGWPTGWFPSQNRWKFMMDISMEYA 331          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: A0A0L0FS42_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FS42_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 3.430e-13
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1
Query:   13 NLRVPLLAVVAYDDPIMAVERTPVAAALESEDLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDY 213
             +R+PLLA+ A DDPI+ V+  P+A    + +L  L+T  GGHVGWPTG RP++++F ++S VVL +
Sbjct:  463 QIRIPLLALHAVDDPIVDVDSIPLAHTATNANLFFLVTMNGGHVGWPTGVRPNQSQFGFMSNVVLSF 529          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: B8C345_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C345_THAPS)

HSP 1 Score: 66.6 bits (161), Expect = 3.750e-11
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 1
Query:    1 GKVVNLRVPLLAVVAYDDPIMA-----VERTPVAAALESEDLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDYS 216
            G++ N+ VP   + A DDP++       E+    A   S ++M+LLTK GGHVGWP G  P RN +KW++    DY+
Sbjct:  666 GRIANVSVPFAVLQALDDPLVGWRTIGTEKPQELADSGSGNVMLLLTKAGGHVGWPLGINPKRNAWKWMNDAARDYA 742          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: A0A1E7FUG7_9STRA (Hydrolase_4 domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FUG7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.090e-10
Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 1
Query:    1 GKVVNLRVPLLAVVAYDDPIMAVERTPVAAALESEDLMILLTKRGGHVGWPTGWRPSRNKF 183
             +++  +VPLLAV A DDPI   E T      +++++M+L TK GGH+GWPTGW PS+N++
Sbjct:  215 NRLMGTKVPLLAVHAIDDPISLYEVTLHNEISKTDNVMLLSTKHGGHIGWPTGWFPSKNRW 275          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: A0A7J6M638_PERCH (Phospholipase abhd3 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6M638_PERCH)

HSP 1 Score: 64.7 bits (156), Expect = 1.760e-10
Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 1
Query:   13 NLRVPLLAVVAYDDPIMAVERTPVAAALESEDLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDYS 216
            ++ VP L V + DDPI+ V+      +  S+ L  L+TK GGHVGWP GW P    F W+S  VL +S
Sbjct:  409 DIAVPTLIVHSLDDPIIHVDAGAAIPSTASKYLFALITKTGGHVGWPQGWTPWEKGFHWVSETVLQFS 476          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: C5M1F7_PERM5 (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5M1F7_PERM5)

HSP 1 Score: 60.8 bits (146), Expect = 2.010e-10
Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 1
Query:   13 NLRVPLLAVVAYDDPIMAVERTPVAAALESEDLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDYS 216
            N+ +P L V A DDP++ V+         S+ L  L+T  GGH+GWP GW P +  FKW+S  V+ ++
Sbjct:    9 NIAIPTLLVHARDDPVIHVDAAAKLPPNASKYLYTLVTPSGGHLGWPQGWLPWQQGFKWISDTVVAFA 76          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: B8BUL5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUL5_THAPS)

HSP 1 Score: 60.8 bits (146), Expect = 2.490e-10
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 1
Query:    1 GKVVNLRVPLLAVVAYDDPI--MAVERTPVAAALESE-DLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDY 213
            G++ N+ +PL  V + DDP+        P   A   + + MIL TK GGHVGWP GW P +N ++W+S     +
Sbjct:   15 GRIGNVSIPLCMVQSLDDPVGYWGTFHDPSKVARTGDGNTMILFTKSGGHVGWPLGWNPRKNGWRWMSDTAASF 88          
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Match: A0A7J6M5U6_PERCH (Phospholipase abhd3 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6M5U6_PERCH)

HSP 1 Score: 63.9 bits (154), Expect = 3.280e-10
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 1
Query:   13 NLRVPLLAVVAYDDPIMAVERTPVAAALESEDLMILLTKRGGHVGWPTGWRPSRNKFKWLSGVVLDYS 216
            N+ +P L V A DDP++ V+ +       S+ L  L+T  GGH+GWP GW P +  FKW+S  V+ +S
Sbjct:  416 NISIPTLLVHACDDPVLHVDASAKLPPNASKYLYTLVTSSGGHLGWPQGWAPWQQGFKWMSDTVMAFS 483          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig869.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9X5_9PHAE9.410e-1952.11AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
A0A7S1D7A6_CYCTE4.940e-1645.24Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4ADV3_9STRA9.600e-1547.06Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A0L0FS42_9EUKA3.430e-1347.76Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
B8C345_THAPS3.750e-1140.26Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1E7FUG7_9STRA1.090e-1047.54Hydrolase_4 domain-containing protein (Fragment) n... [more]
A0A7J6M638_PERCH1.760e-1044.12Phospholipase abhd3 n=1 Tax=Perkinsus chesapeaki T... [more]
C5M1F7_PERM52.010e-1039.71Uncharacterized protein (Fragment) n=1 Tax=Perkins... [more]
B8BUL5_THAPS2.490e-1037.84Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7J6M5U6_PERCH3.280e-1041.18Phospholipase abhd3 n=1 Tax=Perkinsus chesapeaki T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig869contigP-wetherbeei_contig869:985..1476 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FTE8
PFAMsAbhydrolase_1,Hydrolase_4
Model size216
Max annot lvl2759|Eukaryota
KEGG koko:K13696
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.88e-18
EggNOG OGsCOG0429@1|root,KOG1838@2759|Eukaryota
Ec32 ortholog descriptionAlpha/beta hydrolase fold-1
Ec32 orthologEc-21_001080.1
Descriptionacylglycerol lipase activity
Cds size216
COG categoryO
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187054.4916499-CDS-P-wetherbeei_contig869:984..10721683187054.4916499-CDS-P-wetherbeei_contig869:984..1072Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig869 985..1072 -
1683187054.5038576-CDS-P-wetherbeei_contig869:1348..14761683187054.5038576-CDS-P-wetherbeei_contig869:1348..1476Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig869 1349..1476 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig869.1.1prot_P-wetherbeei_contig869.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig869 985..1476 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig869.1.1

>prot_P-wetherbeei_contig869.1.1 ID=prot_P-wetherbeei_contig869.1.1|Name=mRNA_P-wetherbeei_contig869.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp
GKVVNLRVPLLAVVAYDDPIMAVERTPVAAALESEDLMILLTKRGGHVGW
PTGWRPSRNKFKWLSGVVLDYS
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mRNA from alignment at P-wetherbeei_contig869:985..1476-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig869.1.1 ID=mRNA_P-wetherbeei_contig869.1.1|Name=mRNA_P-wetherbeei_contig869.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig869:985..1476- (Phaeothamnion wetherbeei SAG_119_79)
GGAAAGGTCGTCAACCTGCGGGTGCCGCTTCTGGCCGTGGTTGCGTACGA CGACCCCATCATGGCGGTGGAGCGGACGCCCGTGGCGGCGGCATTAGAAT CGGAGGACCTCATGATTCTTCTGACAAAGTGAGTATTTTCTCTTTAAGGG TTATGCAGCTTCAGACTTTTCTTCTGGTTGGGCGCCGAACACCATTTCTA CGCCTTTCCGACCAGCTGACGGGCTGAAGTTACTTGAACGCAGCAGCCTC TTCCGCCTTCTTTCCAGGCAAAGGCGCGCAATCAACTTCCGATCGCTTCC CACTCCCTTTCCTGACCCCATCCCCCCATTCTTCTTGTTGTCGCGGCTCT CCGCCGCCGCGACCGAATCAAAACATAAAAAACAACAAAACGGAAATCAC ACAGACGAGGCGGGCACGTGGGGTGGCCCACCGGGTGGCGCCCCTCACGC AACAAGTTCAAGTGGCTGAGCGGCGTCGTGCTCGACTACAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig869:985..1476-

>mRNA_P-wetherbeei_contig869.1.1 ID=mRNA_P-wetherbeei_contig869.1.1|Name=mRNA_P-wetherbeei_contig869.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig869:985..1476- (Phaeothamnion wetherbeei SAG_119_79)
GGAAAGGTCGTCAACCTGCGGGTGCCGCTTCTGGCCGTGGTTGCGTACGA
CGACCCCATCATGGCGGTGGAGCGGACGCCCGTGGCGGCGGCATTAGAAT
CGGAGGACCTCATGATTCTTCTGACAAAACGAGGCGGGCACGTGGGGTGG
CCCACCGGGTGGCGCCCCTCACGCAACAAGTTCAAGTGGCTGAGCGGCGT
CGTGCTCGACTACAGC
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