mRNA_P-wetherbeei_contig8665.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: D7FZW5_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW5_ECTSI) HSP 1 Score: 218 bits (556), Expect = 4.320e-59 Identity = 120/187 (64.17%), Postives = 143/187 (76.47%), Query Frame = 2
Query: 8 YGRDLLPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGRSMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVA-LHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSSYA 565
Y D +P LL++Y+AY R + HP LT+ AARVLQKLYLTMR EA GRSMPIT RQLESLVRLSQARA+ ELRE VTE+DAKDVVDM+ ESLL+AC D G + F GRSG L +QV+ FVAA+ K A+++GSA F R EL+ +AN LCLA+ DF+ FLDVLR ECYLL KG LF LQ+S +A
Sbjct: 675 YKDDPIPTQLLKRYVAYAREHCHPSLTLKAARVLQKLYLTMRNEARDGRSMPITMRQLESLVRLSQARAKVELREHVTEQDAKDVVDMMQESLLEACVTDTGAIDF--GRSGATGLAKQVRTFVAAVTKRAKQKGSAVFPRQELMQIANDLCLAIVDFEGFLDVLRQECYLLKKGPRLFSLQSSDFA 859
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: A0A836CFT0_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT0_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.270e-46 Identity = 112/207 (54.11%), Postives = 140/207 (67.63%), Query Frame = 2
Query: 11 GRDLLPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGR----------------------SMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQ-LCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSSY 562
G D+LP LLRKYIAY R Y PRL+ AAAR LQKLYL MR EA GR S PITTRQLES+VRLSQARA+A+LREEV+ +DA DV+ M+ ESLL+A +D G + F GR G +L +Q+K FVAAL ++R+GSA F+ EL ++A Q L V+DF FL+VLRSECYLL +GA +++LQTSS+
Sbjct: 670 GGDVLPQPLLRKYIAYARRYCAPRLSKAAARELQKLYLVMRAEAAGGRLRHASAXXXXXXXXXXXXXXXXSTPITTRQLESMVRLSQARAKADLREEVSVQDALDVIHMMQESLLEAHMNDAGAVDFVRGR-GASLPKQIKAFVAALNVASDRKGSALFQEKELREIAQQRLNPPVADFGGFLEVLRSECYLLKRGAKVYQLQTSSF 875
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: A0A7S4DDL0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDL0_HETAK) HSP 1 Score: 166 bits (421), Expect = 8.660e-44 Identity = 91/183 (49.73%), Postives = 129/183 (70.49%), Query Frame = 2
Query: 17 DLLPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGRSMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAG--GRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSS 559
D +PP LLRKYIA+ R + P+L++ AA++LQ +YLT+R EA +GRSMPITTRQLESL+RL+QARA+AELR VT +DA DV++++ ES+L+A TDD G F G +L ++VK+FVA L + AE +G+ F EL+ + L V+DFD F++VL + YLL KG ++ L T++
Sbjct: 115 DPIPPELLRKYIAWARKTAAPKLSLEAAQILQGMYLTLRREAVKGRSMPITTRQLESLIRLAQARAKAELRLVVTAQDANDVIELMQESMLEASTDDTGSFDFETPEGSRATSLAKKVKMFVADLTRKAEARGTPIFHWNELIQIPQALGFEVNDFDNFMEVLAHQNYLLKKGHNIYHLTTAT 297
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: A0A662YGV5_9STRA (MCM domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGV5_9STRA) HSP 1 Score: 164 bits (414), Expect = 8.640e-41 Identity = 94/184 (51.09%), Postives = 124/184 (67.39%), Query Frame = 2
Query: 23 LPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAER----GRSMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSSY 562
+P +RK+IAY R Y HPRL+ AA +LQK YL +R E S+PITTRQLES++RLSQARARAEL E VT A+DVVD++ E LL T + G + F G G++L ++VK +VA L K A R+ ++ F ELL+VAN + L V DF F+D+LR+ECYLL KG G F++Q S+Y
Sbjct: 389 IPIYFVRKFIAYARRYVHPRLSTEAASLLQKKYLELRSAGENQGNPSDSIPITTRQLESMIRLSQARARAELAELVTAEHAQDVVDIMQECLLDTYTTEDGSLDF-GRSGGMSLAKKVKAYVARLMKAAARRNTSMFSMEELLEVANSMGLQVDDFRDFVDILRNECYLLKKGPGQFKVQVSAY 571
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: A0A3R7H048_9STRA (MCM domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A3R7H048_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.150e-40 Identity = 93/189 (49.21%), Postives = 126/189 (66.67%), Query Frame = 2
Query: 8 YGRDLLPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGR----SMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSSY 562
Y + +P +RK+IAY R Y HPRL+ AA +LQK YL +R E + S+PITTRQLES++RLSQARARAEL E VT A+DVVD++ E LL + G + F G G++L ++VK +VA L K A R+ ++ F +LL+VA+ + L V DF F+D+LR+ECYLL KG G F++Q SSY
Sbjct: 375 YSMNPIPLYFVRKFIAYARRYVHPRLSAEAASLLQKKYLELRSAGEGQQNPTDSIPITTRQLESMIRLSQARARAELSETVTAEHAQDVVDIMQECLLDTYITEDGNLDF-GRSGGMSLAKKVKAYVARLMKAAARRNTSLFSMEDLLEVADSMGLKVDDFRDFVDILRNECYLLKKGPGQFKVQMSSY 562
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: A0A6A3LSF4_9STRA (DNA helicase n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LSF4_9STRA) HSP 1 Score: 164 bits (416), Expect = 5.560e-40 Identity = 95/189 (50.26%), Postives = 128/189 (67.72%), Query Frame = 2
Query: 8 YGRDLLPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGR----SMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSSY 562
Y + +P +RK+IAY R Y HPRL+ AA VLQK YL +R E + S+PITTRQLESL+RLSQARARAEL E V+ + A+DVVD++ E LL T + G + F G G++L ++VK +VA L K A R+ ++ F +LL+VA+ + L V DF F+D+LR+ECYLL KG G F++Q SSY
Sbjct: 981 YSKSPIPLYFVRKFIAYARRYVHPRLSSEAAAVLQKKYLELRSAGEGQQNPTDSIPITTRQLESLIRLSQARARAELAETVSAQHAQDVVDIMQECLLDTYTTEDGNLDF-GRSGGMSLAKKVKAYVARLMKAAARRNTSLFSMDDLLEVADSMGLKVDDFRDFVDILRNECYLLKKGPGQFKVQVSSY 1168
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: H3G6C0_PHYRM (MCM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6C0_PHYRM) HSP 1 Score: 155 bits (392), Expect = 7.060e-40 Identity = 89/185 (48.11%), Postives = 125/185 (67.57%), Query Frame = 2
Query: 8 YGRDLLPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGR----SMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQ 550
Y + +P +RK+IAY R Y HPRL+ AA +LQK YL +R E + S+PITTRQLES++RLSQARARAEL E V+ + A+DVVD++ E LL T + G + F G G++L ++VK +VA L K A R+ ++ F +LL+VA+ + L V DF F+D+LR+ECY+L KG G F++Q
Sbjct: 125 YSMNPIPLYFVRKFIAYARRYVHPRLSSDAAALLQKKYLELRSAGEGQQNPTDSIPITTRQLESMIRLSQARARAELAETVSAKHAQDVVDIMQECLLDTYTTEDGNLDF-GRSGGMSLAKKVKAYVARLMKAAARRNTSLFSMDDLLEVADSMGLKVDDFRDFVDILRNECYILKKGPGQFKVQ 308
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: M4C4E8_HYAAE (MCM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4E8_HYAAE) HSP 1 Score: 154 bits (389), Expect = 9.820e-40 Identity = 90/189 (47.62%), Postives = 125/189 (66.14%), Query Frame = 2
Query: 8 YGRDLLPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGR----SMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSSY 562
+ + +P +RK+IAY R Y HPRL+ AA VLQK YL MR E + S+PITTRQLESL+RLSQARARAEL E V+ A+DVV+++ E +L + G + F G G++L ++VK +VA L K A R+ ++ F +LL+VA+ + L V DF F+D+LR+ECYLL KG +++Q SSY
Sbjct: 92 FSMNPIPLYFVRKFIAYARRYVHPRLSPEAAAVLQKKYLEMRSAGEGQQNSTDSIPITTRQLESLIRLSQARARAELAETVSIEHAQDVVEIMQECMLDTSVTEDGSLDF-GRSGGMSLAKKVKAYVARLMKAAARRNTSLFSMDDLLEVADGMALKVDDFRDFVDILRNECYLLKKGPMQYKVQVSSY 279
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: A0A3R7GPA6_9STRA (MCM domain-containing protein n=23 Tax=Phytophthora TaxID=4783 RepID=A0A3R7GPA6_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.340e-39 Identity = 93/189 (49.21%), Postives = 126/189 (66.67%), Query Frame = 2
Query: 8 YGRDLLPPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGR----SMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSSY 562
Y + +P +RK+IAY R Y HPRL+ AA +LQK YL +R E + S+PITTRQLES++RLSQARARAEL E VT A+DVVD++ E LL + G + F G G++L ++VK +VA L K A R+ ++ F +LL+VA+ + L V DF F+D+LR+ECYLL KG G F++Q SSY
Sbjct: 495 YSMNPIPLYFVRKFIAYARRYVHPRLSAEAASLLQKKYLELRSAGEGQQNPTDSIPITTRQLESMIRLSQARARAELSETVTAEHAQDVVDIMQECLLDTYITEDGNLDF-GRSGGMSLAKKVKAYVARLMKAAARRNTSLFSMEDLLEVADSMGLKVDDFRDFVDILRNECYLLKKGPGQFKVQVSSY 682
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Match: A0A388L1C4_CHABU (MCM_lid domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L1C4_CHABU) HSP 1 Score: 153 bits (387), Expect = 2.670e-39 Identity = 88/181 (48.62%), Postives = 123/181 (67.96%), Query Frame = 2
Query: 26 PPALLRKYIAYTRCYSHPRLTVAAARVLQKLYLTMREEAERGRSMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHESLLQACTDDQGEMQFAGGRSGVALHRQVKVFVAALGKLAERQGSAAFRRAELLDVANQLCLAVSDFDRFLDVLRSECYLLSKGAGLFELQTSSYAG 568
PP LL+KYIAY R Y PR++ A +V+Q YL +RE + G S PIT RQLESLVRL++ARAR ELRE VT++DA DVV+++ ESLL D+QG ++ G G++ ++ K F++AL ++ Q A F +EL +A+++ L V D D F+D L YLL KGA L+++Q+SSYAG
Sbjct: 91 PPRLLQKYIAYARQYVFPRMSEEACQVIQNFYLRLRERRQSGDSTPITLRQLESLVRLAEARARIELREVVTKQDAVDVVEIMKESLLDKYVDEQGCVE-VGRSGGMSKQKEAKRFLSALQNQSDAQQKAIFSTSELYCLADEIGLKVPDLDMFIDNLNQAGYLLKKGARLYQVQSSSYAG 270 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8665.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8665.1.2 >prot_P-wetherbeei_contig8665.1.2 ID=prot_P-wetherbeei_contig8665.1.2|Name=mRNA_P-wetherbeei_contig8665.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=316bp MREEAERGRSMPITTRQLESLVRLSQARARAELREEVTERDAKDVVDMLHback to top mRNA from alignment at P-wetherbeei_contig8665:195..2159+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8665.1.2 ID=mRNA_P-wetherbeei_contig8665.1.2|Name=mRNA_P-wetherbeei_contig8665.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1965bp|location=Sequence derived from alignment at P-wetherbeei_contig8665:195..2159+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8665:195..2159+ >mRNA_P-wetherbeei_contig8665.1.2 ID=mRNA_P-wetherbeei_contig8665.1.2|Name=mRNA_P-wetherbeei_contig8665.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=948bp|location=Sequence derived from alignment at P-wetherbeei_contig8665:195..2159+ (Phaeothamnion wetherbeei SAG_119_79)back to top |