mRNA_P-wetherbeei_contig8635.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: D8LL37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL37_ECTSI) HSP 1 Score: 320 bits (819), Expect = 1.120e-104 Identity = 163/296 (55.07%), Postives = 199/296 (67.23%), Query Frame = 1
Query: 1 RLCTRDIMRTRDVDGA--WARAPATAPDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYKDP 882
RL TRD T DVDGA + R P + + DI G M LH++ NKPD L+HDDIEG+ R ++ ++ R +DPLEP+Y LPS+ AP PKF RD H++SDIEG RPLYP R + V D+ GA GWKPR+ RAR EA P + L+V DITG FRT R T+ + PSY V GM +ADDP +SRPR LP+A+D PFYPLTTADIEGA PGW+P +NPPLE+RR F NTN++GDI GAQ DTVKH++ TQR VNPL PVY L GE L PQ+P YK+P
Sbjct: 46 RLNTRDNHTTADVDGAQTFVRTSTLTNKPDS---YGVADILGTGSMRLHKD-TNKPDRQLYHDDIEGSNPRNKWLFRTTRCIDPLEPEYTLPSFTTAPPIAPKFTRDSHDVSDIEGTKSRPLYPLEQ-RHNTLVDDIEGAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTQRHVNPLNPVYDSLDGEPLANPQTPLYKEP 336
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A836CFT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT1_9STRA) HSP 1 Score: 312 bits (800), Expect = 7.820e-103 Identity = 155/296 (52.36%), Postives = 192/296 (64.86%), Query Frame = 1
Query: 1 RLCTRDIMRTRDVDGAWARAPAT----APDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYK 876
RL TRD+MR D+DGA P PD ++ +DI GA + LHR NKPD TL D+ G RR ++ RHVDPL+PDY LPSY AP P+PKF+RD +++ DIEG P+PLY R R+ GWKPR+ARAR EAPP Y L+V+DIT + F+T R T+ + P Y YG IADDP SRPR LP +++PF+ LTTADIEGAQPGWKPP L+PPLE RR + NTNYVGDI GA D+V+HA+RT R V+PL P+Y L GE + P SPRY+
Sbjct: 35 RLATRDVMRVDDIDGARTHIPVANITKRPD-----LYNVNDISGACSLRLHRES-NKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLY-RYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYR 323
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A6H5K072_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K072_9PHAE) HSP 1 Score: 292 bits (748), Expect = 5.600e-94 Identity = 153/296 (51.69%), Postives = 187/296 (63.18%), Query Frame = 1
Query: 1 RLCTRDIMRTRDVDGA--WARAPATAPDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYKDP 882
RL TRD T DVDGA + R P + + DI G M LH++ NKPD L+HDDIEG+ R + ++ R +DPLEP+Y LPS+ A PKF RD H++SDIEG R A GWKPR+ RAR EA P + L+V DITG FRT R T+ + PSY V GM +ADDP +SRPR LP+A+D PFYPLTTADIEGA PGW+P +NPPLE+RR F NTN++GDI GAQ DTVKH++ T+R VNPL PVY L GE L PQ+P YK+P
Sbjct: 46 RLNTRDNHTTADVDGARTFVRTSTLTNKPDS---YGVADILGTGSMRLHKD-TNKPDRQLYHDDIEGSNPRNQWRFRTTRCIDPLEPEYTLPSFTTATPIAPKFTRDSHDVSDIEGTKSRXXXXXXX-XXXXXXXXXXXAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTERHVNPLDPVYDSLDGEPLANPQTPLYKEP 336
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: F0YFZ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFZ5_AURAN) HSP 1 Score: 240 bits (613), Expect = 9.480e-73 Identity = 124/249 (49.80%), Postives = 158/249 (63.45%), Query Frame = 1
Query: 130 MTLHRNMVNKPDLTLFHDDIEGTRSRR-HFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRY 873
M LH V D L DIEG++ R HF K+ RHV+PL P+Y LPS L P PKF+RDG+ ISDIEG PR + R R+++ V D+ GA GW+PR+ R R E PP +L+V+DI F+T R TD + P++ + GM + DD R+ P++LP+ D P L T DIEGA+ GWKPP + PPLE RR F NTNY+GDI GAQPDTVKH++RTQR NPL P Y L G+ L P P +
Sbjct: 1 MKLHPRGVGGVDR-LAETDIEGSKPRPLHF--KTERHVNPLCPEYTLPSCALDMPPVPKFVRDGYGISDIEGTAPRSRF-RFAQRETYDVKDIEGAQAGWRPRHERVRREGPPMD-SLNVKDINDIGFKTTRVTDPLRPTHRINGMEVKDDMVRTMPKKLPKPHDGPTLSLYTDDIEGARCGWKPPHEMQPPLEKRRHFRNTNYIGDITGAQPDTVKHSIRTQRETNPLHPAYRSLDGDLLGDPTQPDF 244
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A7S3ZUA3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA3_9STRA) HSP 1 Score: 218 bits (555), Expect = 7.320e-66 Identity = 124/295 (42.03%), Postives = 162/295 (54.92%), Query Frame = 1
Query: 7 CTRDIMRTRDVDGA-----WARAPATAPDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTLFHDD-IEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRY 873
C + D+DGA + R A PD + DI+ + PM LH +P+ +H++ IEG++ R KS RH DPL P+Y LP +L P PKFIRDG+ ++DI+G VP+ A W+PR+ RAR EAPP LDVRDI F T R TD M P Y + GM DDP R++PR LP+A P+ L T DI GA+ GW+PP + PP E RR + +TN+VGDI GAQ DTV+H + T+RR NPL P Y L G+ L P P +
Sbjct: 32 CAHESNYVGDIDGAAPELKYMRYTARRPD-----LYVTKDIEKSSPMKLHARGP-QPNPNEWHNNPIEGSKPRETRF-KSNRHTDPLAPEYVLPRCKLEKPPTPKFIRDGYTVTDIDGTVPKXXXXXXX-XXXXXXXXXXXAQASWRPRHERARREAPPRD-GLDVRDIMDEGFTTTRVTDPMNPHYFMNGMETCDDPIRTKPRALPKAIPGPYRSLYTDDILGAKSGWRPPHEMQPPPEKRRHWRHTNFVGDIGGAQADTVQHTIPTKRRTNPLNPAYRSLDGDILPDPTKPDF 317
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A7S1UJ89_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ89_9STRA) HSP 1 Score: 215 bits (548), Expect = 8.000e-64 Identity = 127/293 (43.34%), Postives = 152/293 (51.88%), Query Frame = 1
Query: 85 TRCFFSPHDIDGARPMTLHRNMVNKPD--------------------------LTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARL-EAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLEPPQSPRYKDP 882
TR DIDGA+P + NKPD G SR F+ RR VDPL P Y LPS++ APAPE D + DI G +PLYP P R +H V D+ GA GWKPRY + E P +LDV DI F++ R TD P + V GM I DD P+RLP +++PF+ L + DIEGA GW PP L P +E RR F NTN+VGDIEGAQ DTVKH +RT+R VNPL P Y L G L+PP P Y DP
Sbjct: 32 TRATNRTDDIDGAKPFLRYTQFTNKPDSFQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPSR--FLSTKRR-VDPLVPTYTLPSFRKAPAPEQPHYSDTMKVEDIAGTHSKPLYPF-PQRINHKVDDIEGAQSGWKPRYRNVFMTEERPS--SLDVSDIAKEGFKSTRVTDPNRPVHYVNGMTIQDDLRYCMPKRLPPQKNTPFFSLQSNDIEGAVSGWVPPHALRPAIEDRRHFRNTNFVGDIEGAQSDTVKHTIRTKRNVNPLNPYYRSLDGILLDPPCRPMYHDP 318
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A2P4X5K5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5K5_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.870e-52 Identity = 106/257 (41.25%), Postives = 145/257 (56.42%), Query Frame = 1
Query: 94 FFSPHDIDGARPMTLH-RNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPP---MLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLE 852
F+ HDI G+ M LH +N D IEGT S H +R V+PLEP+Y LPS+ AP+ EPKF+RD +N+SDIEG + + PRD + D+ GA GW PR+ R E PP L+V DIT F++ R T+ + P Y+V GM IADDP SRP RD P + L T DI+GA G P ++ + RR F +TN DI GA+ DT+ H++R+ R ++P+ P Y GL G +++
Sbjct: 8 FYDVHDIKGSTSMELHPKNWRAGSDDRFKQLPIEGTTSHPAGFHTNRV-VNPLEPNYKLPSFTKAPSVEPKFLRDSYNVSDIEGTSIK-IRDIQHPRDGLKLNDIAGAQAGWLPRHKRGLRENPPRDI-LNVTDITNVDFKSSRVTNVLNPVYSVNGMTIADDP-LSRPLAQHPKRDKPNFTLRTDDIDGA--GCSDPATAIVAGIIMSKRRDFRDTNVTSDITGAKADTLLHSIRSTRHIDPISPKYSGLDGSRVD 258
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: A0A7S2DC98_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DC98_9STRA) HSP 1 Score: 176 bits (447), Expect = 7.170e-50 Identity = 79/158 (50.00%), Postives = 105/158 (66.46%), Query Frame = 1
Query: 379 RDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLE 852
RD+H+V D+ G GW+PR+A AR + P LDV+DI F++ R + P Y ++GM + DD ++ PR+LP+A + +Y L + DI GA GWKPP+ + PP+E+RR F NTN++GDI GAQPDTV HAMRT R NPL PVY L GE LE
Sbjct: 32 RDTHTVTDIEGTQPGWRPRHANARRQNNPIRNELDVKDINDTGFKSQRMNCPLRPEYKIHGMTVGDDMSKTMPRKLPKAAEHEYYSLKSDDITGATCGWKPPVQIYPPMEARRHFRNTNFIGDIPGAQPDTVNHAMRTDRVTNPLEPVYRSLDGEPLE 189
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: G4Z4F7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z4F7_PHYSP) HSP 1 Score: 177 bits (450), Expect = 5.690e-49 Identity = 107/255 (41.96%), Postives = 142/255 (55.69%), Query Frame = 1
Query: 94 FFSPHDIDGARPMTLH-RNMVNKPDLTLFHDDIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQPGWKPPMLL-NPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLE 852
F+ HDI G+ M LH +N D IEGT S+ ++ R V+PLEP+Y LPS+ AP EPKF+RD +N+SDIEG + + PRD V D+ G GW PR+ R E PP L+V+DIT FR+ R T+ + P YTV GM ADDP SRP RD P Y L T DIEGA ++ + RR F +TN DI GA+ DT+ H++R+ RRV+P P+Y L G +++
Sbjct: 67 FYDAHDIKGSTSMELHPKNWRAGSDNRFKQLPIEGTTSQPAGF-RTDRVVNPLEPNYKLPSFVKAPPLEPKFLRDSYNVSDIEGTSIK-IRDIQHPRDGLKVDDIAGTQCGWLPRHKRGLRENPPRDI-LNVQDITNVDFRSSRVTNVLNPVYTVNGMTFADDP-LSRPLVQHPKRDKPNYALKTDDIEGASCADPATAIVAGIVMAHRRNFRDTNVTKDITGAKADTLLHSIRSTRRVDPNAPLYSALDGSRVD 317
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Match: W2QK96_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK96_PHYPN) HSP 1 Score: 176 bits (446), Expect = 2.340e-48 Identity = 103/257 (40.08%), Postives = 143/257 (55.64%), Query Frame = 1
Query: 94 FFSPHDIDGARPMTLHRNMVNKPDLTLFHD-DIEGTRSRRHFVHKSRRHVDPLEPDYPLPSYQLAPAPEPKFIRDGHNISDIEGAVPRPLYPRNPPRDSHSVGDVVGASVGWKPRYARARLEAPPHGYTLDVRDITGAAFRTGRHTDTMAPSYTVYGMHIADDPERSRPRRLPRARDSPFYPLTTADIEGAQ---PGWKPPMLLNPPLESRRQFHNTNYVGDIEGAQPDTVKHAMRTQRRVNPLCPVYVGLGGEKLE 852
F+ HDI G+ M LH F IEGT SR ++ R V+PL+P+Y LPS+ AP EPKF+RD +N+SDIEG + + PRD + D+ GA GW PR+ R E PP L+V+DIT F++ R T+ + P YTV GM ++DDP S+P + RD P Y L T DIEGA P ++ + RR + +TN DI GA+ DT+ H++R+ RRV+P P Y L G +++
Sbjct: 67 FYDAHDIKGSTSMELHPKNWRAGSEDRFKQLPIEGTTSRPAGF-RTERVVNPLQPNYKLPSFTKAPPIEPKFLRDSYNVSDIEGTSIK-VRDIQHPRDGLKLDDIAGAQAGWLPRHKRGLREHPPRDI-LNVQDITNVDFKSSRVTNVLNPVYTVNGMTVSDDP-LSQPLKQHPKRDKPSYALKTDDIEGASCTDPATA--VVAGIVMAHRRNYRDTNITSDISGAKADTLVHSIRSTRRVDPNAPQYSALDGSRVD 317 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8635.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8635.1.1 >prot_P-wetherbeei_contig8635.1.1 ID=prot_P-wetherbeei_contig8635.1.1|Name=mRNA_P-wetherbeei_contig8635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=287bp MRTRDVDGAWARAPATAPDPSTRCFFSPHDIDGARPMTLHRNMVNKPDLTback to top mRNA from alignment at P-wetherbeei_contig8635:146..1027- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8635.1.1 ID=mRNA_P-wetherbeei_contig8635.1.1|Name=mRNA_P-wetherbeei_contig8635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig8635:146..1027- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8635:146..1027- >mRNA_P-wetherbeei_contig8635.1.1 ID=mRNA_P-wetherbeei_contig8635.1.1|Name=mRNA_P-wetherbeei_contig8635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=861bp|location=Sequence derived from alignment at P-wetherbeei_contig8635:146..1027- (Phaeothamnion wetherbeei SAG_119_79)back to top |