mRNA_P-wetherbeei_contig8625.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8625.4.1
Unique NamemRNA_P-wetherbeei_contig8625.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A3D3UIA5_9PROT (Flagellar biosynthetic protein FliR n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UIA5_9PROT)

HSP 1 Score: 317 bits (813), Expect = 1.400e-106
Identity = 160/250 (64.00%), Postives = 203/250 (81.20%), Query Frame = 1
Query:   10 ELIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFLNA 759
            EL+PAQIF F LVF+R+G M +LMP FGE++VPPW+RLG+A +++AV+YPLV   LPVMP     +   VG EA+TG+FIGG+ RLLL ALH+GG VIAFQTGL  AQGFDP+Q+SQSA+V TFLTL+GVNLI A NLHHLL+ AM DSY +F PG+LP  A F+ELA  T+ ++FAMGIQLA+PF+VFG+IFN G+GL+ARLMPQ+Q+FFIA P QI+LGF I+  + SS M+W+LDYFE+G++  L A
Sbjct:    4 ELVPAQIFGFFLVFSRVGSMTILMPAFGEVSVPPWVRLGIAFSLTAVLYPLVKDLLPVMPTTPFAIVAVVGAEALTGLFIGGIARLLLMALHLGGLVIAFQTGLGFAQGFDPSQRSQSALVGTFLTLVGVNLILAANLHHLLVGAMHDSYQLFHPGSLPAPASFAELATQTVGQAFAMGIQLAAPFIVFGIIFNTGIGLLARLMPQVQIFFIAVPGQILLGFMIMGMIFSSMMLWYLDYFEAGVTNLLIA 253          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A3C0TYM0_9PROT (Flagellar biosynthetic protein FliR n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYM0_9PROT)

HSP 1 Score: 317 bits (813), Expect = 1.400e-106
Identity = 162/253 (64.03%), Postives = 202/253 (79.84%), Query Frame = 1
Query:    1 MLGELIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFLNA 759
            M+ +LIP QIFAFML+ ARI G+VMLMPGFGE+ +P WI++  +VA+S V+ PLV   LP  P    G+      EA+ G+ IG +TRLLL+ALHVGGTVIAFQTGLAAAQGFD  Q SQSA+ ATF+TL+GVNLIFA+NLHHLL+QAM DSY IF+PG +PP+ Q SEL+IA +  SF +G++LA+PFL FG++FNVGLGL+ARLMP LQVFFIA PAQI+LGFA+ A V++S M WFLDYF SG++P L +
Sbjct:    1 MIADLIPTQIFAFMLILARISGVVMLMPGFGELNIPAWIKVAFSVAVSVVLLPLVSPVLPPFPSTPAGVVVLTVNEALIGLLIGALTRLLLNALHVGGTVIAFQTGLAAAQGFDANQHSQSAMFATFMTLLGVNLIFASNLHHLLVQAMADSYMIFSPGKVPPLGQISELSIAVVRHSFEIGVKLAAPFLAFGIVFNVGLGLVARLMPTLQVFFIAVPAQILLGFALFAFVITSMMFWFLDYFRSGLAPLLTS 253          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A3M1JU57_9PROT (Flagellar biosynthetic protein FliR n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JU57_9PROT)

HSP 1 Score: 271 bits (692), Expect = 3.110e-88
Identity = 145/246 (58.94%), Postives = 188/246 (76.42%), Query Frame = 1
Query:   16 IPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFL 753
            +P Q+FAF+LVFAR+G M+ML+P  GE +VPP +RL LA+AIS VI  LV  +LP MP     L F +  E + G+F+G   RLL+SALHV GTVIA+ TGLAAAQ FDPAQ +QSAI ++FLTLIGV LIF T LHH++L AM +SY++F PG+LP  + F+ +A  T+ +SF +G+Q+++PFLV+GLIFN+GLGL+ARLMPQLQVFFIA P  IMLGFAIL  VL++ M WFL + E  ++ FL
Sbjct:    6 VPEQVFAFLLVFARLGTMIMLLPALGETSVPPRVRLALALAISLVILALVQPALPAMPDQVFPLFFLLFGEIVIGLFVGASARLLMSALHVAGTVIAYHTGLAAAQAFDPAQGAQSAIFSSFLTLIGVTLIFVTGLHHVMLGAMYESYTLFPPGDLPMTSDFAMMATRTVAQSFRLGLQMSAPFLVYGLIFNIGLGLVARLMPQLQVFFIAMPLNIMLGFAILMFVLATIMAWFLRHVEETVTLFL 251          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A7C1U5Q2_9SPHN (Flagellar biosynthetic protein FliR n=3 Tax=root TaxID=1 RepID=A0A7C1U5Q2_9SPHN)

HSP 1 Score: 263 bits (672), Expect = 3.590e-85
Identity = 139/251 (55.38%), Postives = 186/251 (74.10%), Query Frame = 1
Query:    1 MLGELIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFL 753
            ML EL+P ++FAF+LVF+R+G M+ML+P  GE A+P  +RL +A+AIS +IY LV   LP MP     LA  + +E + GV IG   RLL+SALH  GT+IA Q+GLA AQ FDPAQ +QSA+++TFLTL+ V LIF TN+HH+++ AM DSYS+F  G    +A F+E+ + T+ KSF +G+Q+ASPF+V+GLIFN+GLG++ARLMPQLQVFFIA P  I  GF IL+ VL++ M WFL + ES +  FL
Sbjct:    1 MLAELLPTEVFAFLLVFSRMGAMIMLLPALGETAIPQRVRLAMALAISFLIYSLVRTILPPMPAQPFMLALLIISEILIGVLIGAAIRLLMSALHTAGTIIAMQSGLALAQAFDPAQGAQSALMSTFLTLMAVVLIFVTNMHHMMISAMYDSYSLFPVGGDLKMADFAEIVVNTVAKSFLLGVQIASPFIVYGLIFNIGLGILARLMPQLQVFFIAMPLNIAAGFMILSMVLAAGMNWFLQHMESSLGAFL 251          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A2A5BTD4_9PROT (Flagellar biosynthetic protein FliR n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A5BTD4_9PROT)

HSP 1 Score: 259 bits (663), Expect = 8.050e-84
Identity = 141/250 (56.40%), Postives = 181/250 (72.40%), Query Frame = 1
Query:    4 LGELIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFL 753
            + +L+P +IFAF LVF+R+G M ML+P  GE A+P  +RL +A+A+S +IY LV ASLP MP  A+ L   +  E   GV IG   RLLLSALH  GT+IA QTGLA A  FDPAQ +QSA+++TFLTL+ V LIF TN+H++++ AM+DSYS+F  G     A F+E  I T+  SF +GIQ+ASPF+V+GLIFNVGLG+IARLMPQLQVFFIA P  I++GF I A V+ + MMWFL   ES +  FL
Sbjct:    1 MADLLPTEIFAFFLVFSRLGAMFMLLPALGETAIPMRVRLVMALAVSFLIYTLVSASLPAMPGSALMLGLLIVIEVFIGVMIGTAIRLLLSALHTAGTIIAMQTGLAMAMAFDPAQGAQSALMSTFLTLMAVVLIFITNMHYMMIAAMLDSYSLFPVGTEINTADFAETVIRTVANSFLIGIQIASPFIVYGLIFNVGLGIIARLMPQLQVFFIAMPLNILIGFVIFAIVIPAGMMWFLQQMESSLGAFL 250          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A2G4YM08_9PROT (Flagellar biosynthetic protein FliR n=1 Tax=Paremcibacter congregatus TaxID=2043170 RepID=A0A2G4YM08_9PROT)

HSP 1 Score: 258 bits (658), Expect = 4.460e-83
Identity = 132/248 (53.23%), Postives = 183/248 (73.79%), Query Frame = 1
Query:   13 LIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFLN 756
            ++PA++FAF LVFAR+G M+M++P  GE  +P  IRL LA++IS VIY LV   LP +P  A+ L   +  E + GV IG   RLL++A+H  GT+IA QTGLA AQ FDPAQ +QSA+++TFLTL+ V LIF TNLHH+++ AM DSY++F  G+   ++ F+EL + T+  SF +G+Q+ASPF+V+GLIFN+GLG++ARLMPQLQVFF+A P  IM GF +L+ +L++ M WFL + E  +  FLN
Sbjct:    1 MLPAEVFAFFLVFARLGAMIMVLPALGETGIPQRIRLALALSISFVIYSLVRTKLPAIPDSAILLGILIVFEVLIGVLIGTAIRLLMTAIHTAGTIIAMQTGLAMAQAFDPAQGAQSALMSTFLTLMAVVLIFITNLHHMMISAMYDSYTLFPVGSDLEISNFAELVVRTVANSFLLGVQIASPFIVYGLIFNIGLGILARLMPQLQVFFVAMPLNIMAGFIVLSIMLAAGMNWFLQHMEDSLGVFLN 248          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A2A4UIS5_9PROT (Flagellar biosynthetic protein FliR n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A4UIS5_9PROT)

HSP 1 Score: 255 bits (651), Expect = 5.490e-82
Identity = 135/251 (53.78%), Postives = 183/251 (72.91%), Query Frame = 1
Query:    1 MLGELIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFL 753
            ML +L+P ++FAF+LVF+R+G MVML+P  GE A+P  +RL +A++IS +IY  V + LP MP   + LA  +  E + GV IG   +LL+SALH+ GT++A QTGLA AQ FDPAQ  QSA+++TFLTL+ V LIF TN+HH+++ AM DSY +F  G    +  F+E+ + T+  SF +G+Q+ASPF+V+GLIFN+GLG++ARLMPQLQVFFIA P  I  GF IL  VL++ M WFL Y E+ MS FL
Sbjct:    1 MLADLLPTELFAFLLVFSRLGAMVMLLPALGETAIPQRVRLIMALSISLLIYSSVRSILPPMPASPIMLAVLIVFEVLIGVLIGSAIKLLMSALHIAGTIMAMQTGLAIAQAFDPAQGGQSALMSTFLTLMAVVLIFITNMHHMMISAMYDSYILFPVGAELKMNDFAEIVVDTVANSFLLGVQIASPFIVYGLIFNIGLGILARLMPQLQVFFIAMPLNIAAGFMILGIVLAAAMNWFLQYMENAMSVFL 251          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A3A0EYX4_9PROT (Flagellar biosynthetic protein FliR n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0EYX4_9PROT)

HSP 1 Score: 254 bits (649), Expect = 1.030e-81
Identity = 134/252 (53.17%), Postives = 181/252 (71.83%), Query Frame = 1
Query:    1 MLGELIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFLN 756
            MLG+  P  IFAF LVF R+G  +ML P  GE  +P  IRL  A+ +S VI PLV  +LP +PP A+ L  A+  E + GV +G  TRL++SALHV G V+A+QTGL AAQ FDP Q +Q A+V +FLTL+G+ +IF TNLHHLL+ AM DSY +F  G++P +   + + I  +++SF +G+Q+++PFLV+GL+FN+GLGLI+RLMPQLQVFFIA P  I LGF +L  V+ ++MMWF DYFE+  + FL 
Sbjct:    1 MLGQFSPEAIFAFFLVFLRLGSALMLAPALGESMIPARIRLSFALLLSLVILPLVRDTLPAIPPDAMSLTLALLREMLIGVILGVATRLIMSALHVMGVVVAYQTGLGAAQVFDPVQGTQGAVVGSFLTLLGILVIFTTNLHHLLIAAMRDSYLLFPVGSVPDITDLTTMIIRIVSESFRLGVQMSAPFLVYGLVFNIGLGLISRLMPQLQVFFIAMPLNIALGFVVLFMVIGASMMWFADYFENTTAMFLR 252          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A3B0SQX8_9ZZZZ (Flagellar biosynthesis protein FliR n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SQX8_9ZZZZ)

HSP 1 Score: 252 bits (644), Expect = 6.320e-81
Identity = 135/248 (54.44%), Postives = 182/248 (73.39%), Query Frame = 1
Query:   13 LIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFLN 756
            ++P+++FAF+LVF+R+G MVMLMP  GE A+P  +RL +A+++S +IY LV  SLP +P   + LA  +  E + G+ IG   RLL+SALH  GTVIA Q GLA AQ FDPAQ +QSA++ATFLTL+ V LIF TNLHH+++ AM DSY +F  G    +  F+E+ + T+  SF +G+Q+ASPF+V+GLIFNVGLG++ARLMPQLQVFFIA P  I+ GF IL+ VLS+ M WFL + E  +  FL+
Sbjct:    1 MLPSEVFAFLLVFSRLGAMVMLMPALGETAIPQRVRLVIALSLSFLIYTLVKTSLPAIPDSPLMLAMLIFFEILVGLLIGTSIRLLMSALHTAGTVIAMQMGLAMAQAFDPAQGAQSALMATFLTLMAVVLIFVTNLHHMMISAMYDSYILFPVGGDIKMNDFAEIVVRTVASSFLIGVQVASPFIVYGLIFNVGLGILARLMPQLQVFFIAMPLNIIAGFMILSIVLSAGMAWFLQHMEFSLGAFLS 248          
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Match: A0A2A4TGU2_9PROT (Flagellar biosynthetic protein FliR n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A4TGU2_9PROT)

HSP 1 Score: 251 bits (640), Expect = 2.550e-80
Identity = 134/251 (53.39%), Postives = 181/251 (72.11%), Query Frame = 1
Query:    1 MLGELIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAVIYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTVIAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMVDSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGLGLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPFL 753
            ML +LIP +IF F+LVF+R+G MVML+P  GE A+P  +RL +A+++S +IY  V   LP MP   + L   +  E + GV IG   +LL++ALHVGGT+IA QTGLA AQ FDPAQ +QSA+++TFLTL+ V LIF TN+HH+++ AM DSY +F  G    +  F+E+ + T+  SF +G+Q+ASPF+V+GLIFN+GLG++ARLMPQLQVFFIA P  I  GF IL  VL++ M WFL + ES +  FL
Sbjct:    1 MLADLIPKEIFGFLLVFSRLGAMVMLLPALGETAIPQRVRLIMALSVSLLIYISVRTLLPAMPASPLMLFMMILFEVLIGVLIGSAIKLLMTALHVGGTIIAMQTGLAMAQAFDPAQGAQSALMSTFLTLMAVVLIFITNMHHMMIAAMYDSYILFPVGGDLKMNDFAEIVVNTVANSFMLGVQIASPFIVYGLIFNIGLGILARLMPQLQVFFIAMPLNIAAGFMILGIVLAAAMNWFLQHMESALGAFL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8625.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3UIA5_9PROT1.400e-10664.00Flagellar biosynthetic protein FliR n=5 Tax=Alphap... [more]
A0A3C0TYM0_9PROT1.400e-10664.03Flagellar biosynthetic protein FliR n=1 Tax=Alphap... [more]
A0A3M1JU57_9PROT3.110e-8858.94Flagellar biosynthetic protein FliR n=1 Tax=Alphap... [more]
A0A7C1U5Q2_9SPHN3.590e-8555.38Flagellar biosynthetic protein FliR n=3 Tax=root T... [more]
A0A2A5BTD4_9PROT8.050e-8456.40Flagellar biosynthetic protein FliR n=1 Tax=Alphap... [more]
A0A2G4YM08_9PROT4.460e-8353.23Flagellar biosynthetic protein FliR n=1 Tax=Paremc... [more]
A0A2A4UIS5_9PROT5.490e-8253.78Flagellar biosynthetic protein FliR n=1 Tax=Alphap... [more]
A0A3A0EYX4_9PROT1.030e-8153.17Flagellar biosynthetic protein FliR n=1 Tax=Proteo... [more]
A0A3B0SQX8_9ZZZZ6.320e-8154.44Flagellar biosynthesis protein FliR n=1 Tax=hydrot... [more]
A0A2A4TGU2_9PROT2.550e-8053.39Flagellar biosynthetic protein FliR n=1 Tax=Alphap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8625contigP-wetherbeei_contig8625:1331..2095 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog631454.N177_0574
Preferred namefliR
PFAMsBac_export_1
Model size765
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02421
KEGG TC3.A.6.2
KEGG Pathwayko02040,map02040
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.27e-75
EggNOG OGsCOG1684@1|root,COG1684@2|Bacteria,1NIF4@1224|Proteobacteria,2TTHN@28211|Alphaproteobacteria,1JPBZ@119043|Rhodobiaceae
DescriptionBacterial export proteins, family 1
Cds size765
COG categoryN
BRITEko00000,ko00001,ko02035,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187050.6980007-CDS-P-wetherbeei_contig8625:1330..20951683187050.6980007-CDS-P-wetherbeei_contig8625:1330..2095Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8625 1331..2095 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8625.4.1prot_P-wetherbeei_contig8625.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8625 1331..2095 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8625.4.1

>prot_P-wetherbeei_contig8625.4.1 ID=prot_P-wetherbeei_contig8625.4.1|Name=mRNA_P-wetherbeei_contig8625.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp
MLGELIPAQIFAFMLVFARIGGMVMLMPGFGEMAVPPWIRLGLAVAISAV
IYPLVGASLPVMPPVAVGLAFAVGTEAMTGVFIGGMTRLLLSALHVGGTV
IAFQTGLAAAQGFDPAQQSQSAIVATFLTLIGVNLIFATNLHHLLLQAMV
DSYSIFTPGNLPPVAQFSELAIATITKSFAMGIQLASPFLVFGLIFNVGL
GLIARLMPQLQVFFIAAPAQIMLGFAILAAVLSSTMMWFLDYFESGMSPF
LNAP*
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mRNA from alignment at P-wetherbeei_contig8625:1331..2095+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8625.4.1 ID=mRNA_P-wetherbeei_contig8625.4.1|Name=mRNA_P-wetherbeei_contig8625.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig8625:1331..2095+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGGTGAATTAATTCCAGCGCAGATTTTTGCTTTCATGCTGGTCTT TGCCAGGATTGGCGGCATGGTGATGCTGATGCCGGGGTTTGGTGAAATGG CGGTCCCGCCCTGGATCAGGCTTGGGCTTGCGGTCGCTATTAGTGCTGTC ATTTATCCGCTTGTTGGGGCGTCATTGCCCGTGATGCCTCCTGTCGCTGT GGGGCTTGCGTTTGCCGTTGGCACGGAAGCGATGACCGGGGTGTTTATCG GCGGCATGACGCGCTTGCTGTTAAGCGCGCTGCATGTCGGGGGAACGGTA ATCGCCTTTCAAACGGGGCTGGCCGCCGCGCAGGGGTTTGATCCAGCCCA GCAAAGCCAGTCTGCCATCGTGGCGACATTTTTGACTTTGATCGGCGTCA ATCTGATCTTCGCCACCAATCTGCACCATCTTTTGTTACAGGCGATGGTG GATAGTTATAGTATTTTCACACCGGGCAATCTGCCGCCCGTTGCGCAATT CAGTGAGCTTGCCATTGCAACCATCACCAAATCTTTTGCGATGGGCATCC AGCTTGCCAGCCCGTTTCTGGTATTCGGCCTGATATTCAATGTGGGATTG GGGCTGATTGCCCGTCTGATGCCGCAACTCCAGGTTTTCTTTATCGCCGC GCCCGCGCAAATTATGCTTGGCTTCGCTATTTTAGCTGCTGTGCTATCCA GCACCATGATGTGGTTTCTGGATTATTTTGAATCCGGGATGTCACCGTTC CTGAACGCGCCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8625:1331..2095+

>mRNA_P-wetherbeei_contig8625.4.1 ID=mRNA_P-wetherbeei_contig8625.4.1|Name=mRNA_P-wetherbeei_contig8625.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig8625:1331..2095+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGGTGAATTAATTCCAGCGCAGATTTTTGCTTTCATGCTGGTCTT
TGCCAGGATTGGCGGCATGGTGATGCTGATGCCGGGGTTTGGTGAAATGG
CGGTCCCGCCCTGGATCAGGCTTGGGCTTGCGGTCGCTATTAGTGCTGTC
ATTTATCCGCTTGTTGGGGCGTCATTGCCCGTGATGCCTCCTGTCGCTGT
GGGGCTTGCGTTTGCCGTTGGCACGGAAGCGATGACCGGGGTGTTTATCG
GCGGCATGACGCGCTTGCTGTTAAGCGCGCTGCATGTCGGGGGAACGGTA
ATCGCCTTTCAAACGGGGCTGGCCGCCGCGCAGGGGTTTGATCCAGCCCA
GCAAAGCCAGTCTGCCATCGTGGCGACATTTTTGACTTTGATCGGCGTCA
ATCTGATCTTCGCCACCAATCTGCACCATCTTTTGTTACAGGCGATGGTG
GATAGTTATAGTATTTTCACACCGGGCAATCTGCCGCCCGTTGCGCAATT
CAGTGAGCTTGCCATTGCAACCATCACCAAATCTTTTGCGATGGGCATCC
AGCTTGCCAGCCCGTTTCTGGTATTCGGCCTGATATTCAATGTGGGATTG
GGGCTGATTGCCCGTCTGATGCCGCAACTCCAGGTTTTCTTTATCGCCGC
GCCCGCGCAAATTATGCTTGGCTTCGCTATTTTAGCTGCTGTGCTATCCA
GCACCATGATGTGGTTTCTGGATTATTTTGAATCCGGGATGTCACCGTTC
CTGAACGCGCCATGA
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