mRNA_P-wetherbeei_contig8618.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8618.2.1
Unique NamemRNA_P-wetherbeei_contig8618.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: A0A1Y2R3L3_9BURK (Carnitine dehydratase n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A1Y2R3L3_9BURK)

HSP 1 Score: 810 bits (2091), Expect = 3.600e-295
Identity = 396/430 (92.09%), Postives = 416/430 (96.74%), Query Frame = 1
Query:    1 MLDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGALSASAPAAR-PAPA 1287
            MLDNLE EFP++TPRP++APKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVE PGRGDEFRHYPPVH +LPAQGAPYLWSNRNKRSAALNMKTPEGLAVVR+LVA ADVV+ENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGY DRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEV LFDNAVLMTGYAALQH+FTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQV+ERPDLANDPVL+DRNGRM KR EIF +L E FAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEAR+RNLVTR+EHPVIGW+PNVALPIRYSGTPV DP+PAP VGQHTEEVLR+TLGYS+ERIAALR++GALSASAPAA+ PAPA
Sbjct:    1 MLDNLEAEFPIHTPRPASAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVETPGRGDEFRHYPPVHAELPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRELVAKADVVVENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYKDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVALFDNAVLMTGYAALQHLFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVIERPDLANDPVLSDRNGRMAKRAEIFEMLGEIFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARARNLVTRVEHPVIGWMPNVALPIRYSGTPVADPKPAPAVGQHTEEVLRETLGYSDERIAALRASGALSASAPAAKNPAPA 430          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: UPI00131ABAD6 (CoA transferase n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131ABAD6)

HSP 1 Score: 766 bits (1979), Expect = 4.020e-278
Identity = 371/425 (87.29%), Postives = 396/425 (93.18%), Query Frame = 1
Query:    1 MLDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGALSASAPAAR 1275
            MLDNLE +FPV+TPR ++APKALEGVRV+DFTHFIAGPFATMV+ADMGADVIKVE PGRGDEFRHYPPVH DLPAQGAPYLWSNRNKRS A+NMK+PEGLAVVRDL+ +ADVVMENFSTGVMERFGLDYESCRKLNP+LIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGY+DRQGVRTLSPVIDISTATMA NAILGALLARHRT EGQSIE+ LFDNAVLMTGYA +QH+FTG VPQRHGNTSPDTCPSGVFES DKPFYINCGNDKIFHRLMAQVLERPDLA+DPVLADRNGRM +RDEIF +LN  FA+ PWSYWQPRMRAASIPCGEVR+VGDAIRSPEARSRNLVTR+EHP +GW+PNVALPIRYSGTP+ DP P P VGQHTEEVLRDTLGYSE RIA L+ AGA S   PAAR
Sbjct:    1 MLDNLEADFPVHTPRRADAPKALEGVRVIDFTHFIAGPFATMVLADMGADVIKVETPGRGDEFRHYPPVHADLPAQGAPYLWSNRNKRSVAVNMKSPEGLAVVRDLIKTADVVMENFSTGVMERFGLDYESCRKLNPRLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYHDRQGVRTLSPVIDISTATMASNAILGALLARHRTNEGQSIEIALFDNAVLMTGYATMQHLFTGKVPQRHGNTSPDTCPSGVFESKDKPFYINCGNDKIFHRLMAQVLERPDLADDPVLADRNGRMARRDEIFELLNGLFAEHPWSYWQPRMRAASIPCGEVRSVGDAIRSPEARSRNLVTRVEHPEVGWMPNVALPIRYSGTPMADPLPPPSVGQHTEEVLRDTLGYSEARIAELQQAGAFSGK-PAAR 424          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: A0A6P2F1N6_9BURK (Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2F1N6_9BURK)

HSP 1 Score: 716 bits (1848), Expect = 4.030e-258
Identity = 339/433 (78.29%), Postives = 386/433 (89.15%), Query Frame = 1
Query:    4 LDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGALSASAPAARPAPAAPAEA 1302
             D  E E P + PRP+ AP ALEG+RVVDFTHFIAGPFAT +MA+MGADVIKVE PGRGDEFRHYPPVHP++PAQGAP++W+NRNKRS ALN+KTPEGLAVVR+L+A ADVV+ENFSTGVM RFGLDYESCRK+NPKL+YCSVSAYGREGEFADRLGFDPIAQAESGFISMNGY DRQGVRTLSPV+DISTA MACNAILGAL+AR RTGEGQ+IEV LFDNAVLMTGYA++QH+F+G  PQRHGNTSPDTCPSGVF+S DKPFYINCGNDKIFHRL+ QVLERPDLA+DPVL+DRNGR+ +RDE+F +L EAFA+QPWS+WQPRMRAASIPCGEVR VG+A+RS EAR+R L+TRI HPV+GW+PN+A+P R+SGTPVVDP  AP VGQHT+EVL + LGY   R+AALR+ GALSA+ P     PA PA A
Sbjct:    6 FDRFEAELPPHVPRPAGAPTALEGIRVVDFTHFIAGPFATTIMAEMGADVIKVETPGRGDEFRHYPPVHPEMPAQGAPHMWTNRNKRSVALNLKTPEGLAVVRELIAGADVVVENFSTGVMARFGLDYESCRKINPKLVYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYGDRQGVRTLSPVVDISTAMMACNAILGALIARGRTGEGQAIEVALFDNAVLMTGYASMQHLFSGVDPQRHGNTSPDTCPSGVFQSKDKPFYINCGNDKIFHRLVEQVLERPDLADDPVLSDRNGRISRRDELFKLLEEAFAQQPWSHWQPRMRAASIPCGEVRTVGEALRSKEARARGLLTRIPHPVVGWMPNIAMPFRFSGTPVVDPVAAPSVGQHTDEVLGEVLGYDATRLAALRATGALSATPPRKAHMPAEPAAA 438          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: A0A6P2FCN5_9BURK (Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF n=8 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2FCN5_9BURK)

HSP 1 Score: 700 bits (1806), Expect = 7.710e-252
Identity = 327/417 (78.42%), Postives = 368/417 (88.25%), Query Frame = 1
Query:    1 MLDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGAL 1251
            M D LEN+FPV+ PRP++AP ALEG+RV+DF+HF+AGP ATM++ DMGADVIKVE PGRGDEFRHYPPV P+ PAQGAPY W NRNKRS ALN+K+PEG+AVV++L+A ADVV ENFSTGVMERFGLDY S +KLNP+++YCSVSAYGREG F DRLGFDPIAQAESGFIS+NGY DRQGVRTLSPV+DISTA MACNAILGALLAR RTG+GQ IEV LFDNAVLMTGYAA+QH++TGA PQRHGNTSPDTCPSGVF S DKPFYINCGNDKIFHRL AQVLERPDLANDPV ADRNGRMGKR+EIF +L E F + PWSYWQPRMRAA IPCGEVR+VGDA+RSPEA+ R LVTRI HP +GW+PNV LPI YS TP+ DP PAP VGQHT EVL + LGY + RIAAL+++GAL
Sbjct:    1 MFDRLENDFPVHKPRPADAPVALEGIRVIDFSHFLAGPIATMILGDMGADVIKVETPGRGDEFRHYPPVPPEAPAQGAPYAWGNRNKRSVALNLKSPEGVAVVKELIAQADVVCENFSTGVMERFGLDYASVKKLNPRIVYCSVSAYGREGAFKDRLGFDPIAQAESGFISLNGYPDRQGVRTLSPVVDISTAMMACNAILGALLARARTGQGQQIEVALFDNAVLMTGYAAMQHLYTGAHPQRHGNTSPDTCPSGVFMSQDKPFYINCGNDKIFHRLAAQVLERPDLANDPVYADRNGRMGKREEIFKLLEELFVQHPWSYWQPRMRAAQIPCGEVRSVGDALRSPEAKERKLVTRIAHPTLGWIPNVRLPILYSATPLADPEPAPGVGQHTHEVLAEVLGYDDARIAALQASGAL 417          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: UPI00190DBF99 (CoA transferase n=1 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI00190DBF99)

HSP 1 Score: 676 bits (1743), Expect = 4.350e-242
Identity = 318/417 (76.26%), Postives = 364/417 (87.29%), Query Frame = 1
Query:    4 LDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGALS 1254
            L +L NEFP+ TPRPS APKALEG+RVVDFTHFIAGP ATM++ADMGADVIK+EA GRGDEFR+YPP HPD    GAPYLW+NRNKRS AL++K+PEGL V  +LVA+ADVV ENFSTGVMER GL YE+C+ LNPKLIYCSVSAYGR+G FADRLGFDPIAQAESGF+SMNGY DR GVR LSPV+DISTA MACNA+LGALLAR R+GEGQS+E+ LFDNA+LMTGYA +QH+FTGA PQRHGNTSPDTCPSGVF+++DKPFYINCGNDKIF RL A VLERPDLANDPVLADRNGR+ +R E+F IL+EAFA+ PWSYWQPRMR A+IPCGEVR VG+A+RS EAR R +V+RI HP +GWLPN+ LPIRYS TPVVDP+PAP +G+HT E+LRDTLGY  +R+  L  AGA S
Sbjct:    8 LSDLANEFPLPTPRPSGAPKALEGIRVVDFTHFIAGPLATMMLADMGADVIKIEALGRGDEFRYYPPRHPDDATLGAPYLWANRNKRSIALDLKSPEGLKVALELVATADVVAENFSTGVMERLGLGYEACKALNPKLIYCSVSAYGRDGSFADRLGFDPIAQAESGFVSMNGYADRMGVRALSPVMDISTAMMACNAMLGALLARERSGEGQSVELALFDNAMLMTGYATMQHLFTGADPQRHGNTSPDTCPSGVFQAADKPFYINCGNDKIFQRLAAGVLERPDLANDPVLADRNGRIARRAELFPILDEAFAQHPWSYWQPRMREAAIPCGEVRTVGEALRSKEARERGIVSRIPHPTLGWLPNITLPIRYSRTPVVDPKPAPLIGEHTHEILRDTLGYDAQRVEQLLEAGAAS 424          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: A0A6P2FAS9_9BURK (Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF n=1 Tax=Variovorax sp. PBS-H4 TaxID=434008 RepID=A0A6P2FAS9_9BURK)

HSP 1 Score: 676 bits (1743), Expect = 4.510e-242
Identity = 320/415 (77.11%), Postives = 363/415 (87.47%), Query Frame = 1
Query:   22 EFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGALSASAP 1266
            + P++ PRP+ AP ALEG+RVVDFTHFIAGP+AT +MA+MGADVIKVE PGRGDEFRHYPP+HP LPAQGAP++W+NRNKRS A+N+K  EGLAVVR+L+  ADVV ENFSTGVM+RFGLDYES +K+NP+++Y SVSAYGREGEFADRLGFDPIAQAESGFISMNGY DRQGVRTLSPVIDISTA MACNAIL ALLAR RTGEGQ IEV LFDNAVLMTGYAA+QH+F+GA PQRHGNTSPDTCPSGVFES DKPFYINCGNDKIFHRL +QVLERPDLA+DPV  DRNGR+ KR EIF IL + F +QPW YWQPRMRAA IPCGEVR VG A+RS EA++R LVTRIEHPV+GW+PNV +P R+S TP VDP+PAP VGQHT+EVL + LGY   ++A LR  GALSA+ P
Sbjct:   15 DLPLHKPRPAGAPTALEGIRVVDFTHFIAGPYATTIMAEMGADVIKVETPGRGDEFRHYPPLHPQLPAQGAPHMWTNRNKRSVAVNLKNEEGLAVVRELIRHADVVAENFSTGVMDRFGLDYESVKKINPRIVYLSVSAYGREGEFADRLGFDPIAQAESGFISMNGYPDRQGVRTLSPVIDISTAMMACNAILAALLARGRTGEGQYIEVGLFDNAVLMTGYAAMQHMFSGADPQRHGNTSPDTCPSGVFESKDKPFYINCGNDKIFHRLASQVLERPDLADDPVYKDRNGRIAKRAEIFGILEDLFKQQPWEYWQPRMRAAQIPCGEVRTVGAALRSKEAQARELVTRIEHPVVGWMPNVRMPFRFSETPTVDPKPAPAVGQHTDEVLGEVLGYDAAKLAQLRDNGALSATEP 429          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: UPI00190B741E (CoA transferase n=1 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI00190B741E)

HSP 1 Score: 674 bits (1739), Expect = 1.770e-241
Identity = 316/414 (76.33%), Postives = 362/414 (87.44%), Query Frame = 1
Query:    4 LDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAG 1245
            L +L +EFP+ T RPS APKALEG+RVVDFTHFIAGP ATM++ADMGADVIK+EA GRGDEFR+YPP HPD    GAPYLW+NRNKRS AL++K+PEGL V  +L+ASADVV ENFSTGVMER GL YE+C+ LNPKLIYCSVSAYGREG FADRLGFDPIAQAESGF+SMNGY DR GVR LSPV+DISTA MACNA+LGAL AR RTGEGQS+E+ LFDNA+LMTGYA +Q +FTG  PQRHGNTSPDTCPSGVF+++DKPFYINCGNDKIF RL A+VLERPDLANDPVLADRNGRMG+R+E+FSILN+AF +QPWSYWQPRMR ASIPCGEVR VG+A+RS EAR R +V+RI H  +GWLPN++LPIRYS TPVVDP+PAP +G+HT E+LRDTLGY  +R+  L  AG
Sbjct:    8 LSDLASEFPLPTSRPSGAPKALEGIRVVDFTHFIAGPLATMMLADMGADVIKIEAVGRGDEFRYYPPGHPDDKTLGAPYLWANRNKRSIALDLKSPEGLKVALELIASADVVAENFSTGVMERLGLGYETCKALNPKLIYCSVSAYGREGSFADRLGFDPIAQAESGFVSMNGYADRMGVRALSPVMDISTAMMACNAMLGALFARERTGEGQSVEIALFDNAMLMTGYATMQQLFTGTEPQRHGNTSPDTCPSGVFQAADKPFYINCGNDKIFQRLAARVLERPDLANDPVLADRNGRMGRREELFSILNDAFEQQPWSYWQPRMREASIPCGEVRTVGEALRSKEARERGIVSRIRHSTLGWLPNISLPIRYSRTPVVDPKPAPLIGEHTLEILRDTLGYDVDRVEQLLQAG 421          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: A0A7V8G4X8_9BURK (Acetyl-CoA:oxalate CoA-transferase n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A7V8G4X8_9BURK)

HSP 1 Score: 662 bits (1708), Expect = 6.160e-237
Identity = 315/416 (75.72%), Postives = 361/416 (86.78%), Query Frame = 1
Query:    1 MLDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGA 1248
            ML+ LE++FP + PRP+ AP+AL G++VVDFTHFIAGPF TM++ADMGADVIK+EAPGRGD+FR YPPVHP+L AQGAP+LWSNRNKRS AL++KTPEGL V R LVASADVV+ENFSTGVMERFGLDYESCRK NP+L+YCS+SAYGREG FADRLGFDPIAQAESGF+SMNGY DRQGVR LSPV+DISTA MA NAILGAL+AR RTG GQ++EV LFDNAVLMTGYA LQHVF+GA PQRHGNTSPDTCPSGVFE+ D  FYINCGN+KIF RLM QVLERPD+A DP  A    R  +R+ +F++L EAFAKQPWS+WQ RMRAA +PCG+VR+VG+AIRSPEAR R LVTRI HP +GW+PN+ALPIRYS TP+ DP  AP VGQHT+EVLR+ LGY E+R AAL  AGA
Sbjct:    1 MLEQLESDFPEHQPRPAGAPQALAGIKVVDFTHFIAGPFPTMILADMGADVIKIEAPGRGDDFRQYPPVHPEL-AQGAPFLWSNRNKRSVALDLKTPEGLEVARALVASADVVVENFSTGVMERFGLDYESCRKANPELVYCSMSAYGREGAFADRLGFDPIAQAESGFVSMNGYADRQGVRALSPVMDISTAMMAANAILGALVARERTGRGQAVEVALFDNAVLMTGYATLQHVFSGAEPQRHGNTSPDTCPSGVFEAQDGSFYINCGNNKIFQRLMTQVLERPDVAADPAYASGRERSQRRELLFALLGEAFAKQPWSHWQSRMRAAGVPCGQVRSVGEAIRSPEARERRLVTRIPHPQVGWVPNMALPIRYSRTPIADPVAAPTVGQHTQEVLREALGYDEQRFAALARAGA 415          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: A0A2P8KQB8_9BURK (Carnitine dehydratase n=1 Tax=Variovorax sp. WS11 TaxID=1105204 RepID=A0A2P8KQB8_9BURK)

HSP 1 Score: 660 bits (1703), Expect = 3.420e-236
Identity = 317/416 (76.20%), Postives = 363/416 (87.26%), Query Frame = 1
Query:    1 MLDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGA 1248
            ML+NLEN+FP + PRP+ AP+AL G+RVVDFTHFIAGPFATM++ADMGADVIKVE PGRGD+FR YPPVHPDL AQGAP+LW+NRNKRS AL++K+PEGLAV R+LVA+ADVV ENFSTGVMERFGLDY+SCRKLNPKLIYCSVSAYGREG FADRLGFDPIAQAESGF+SMNGY DR+GVR LSPV+DISTA MACNAILGAL+AR R+G+GQ+IEV LFDNA+LMTGYA LQHVF+G  PQRHGNTSPDTCPSGVF++SD  FYIN GN+KIF RLMAQV+ERPDLA  P  A    R  +R+E+F+IL EAFA+QPWS+WQ RMRAA +P G++R+VG+A+RSPEAR R LVTRI HP +GW+PN+ALPIRYS TPV DP  AP VGQHT EVLR+TLGY   RIA L  AGA
Sbjct:    1 MLENLENDFPEHQPRPAGAPQALAGIRVVDFTHFIAGPFATMILADMGADVIKVETPGRGDDFRQYPPVHPDL-AQGAPFLWANRNKRSIALDLKSPEGLAVARELVATADVVTENFSTGVMERFGLDYDSCRKLNPKLIYCSVSAYGREGAFADRLGFDPIAQAESGFVSMNGYADREGVRALSPVMDISTAMMACNAILGALVARERSGQGQAIEVALFDNALLMTGYATLQHVFSGQEPQRHGNTSPDTCPSGVFQASDCAFYINSGNNKIFQRLMAQVIERPDLAEAPQYATGAARSQRREELFAILGEAFAQQPWSHWQARMRAAGVPSGQLRSVGEAMRSPEARERRLVTRIPHPTVGWVPNMALPIRYSRTPVADPVAAPTVGQHTAEVLRETLGYDAARIARLAEAGA 415          
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Match: A0A679JUJ4_VARPD (Acetyl-CoA:oxalate CoA-transferase n=5 Tax=Variovorax TaxID=34072 RepID=A0A679JUJ4_VARPD)

HSP 1 Score: 657 bits (1696), Expect = 4.130e-235
Identity = 308/416 (74.04%), Postives = 361/416 (86.78%), Query Frame = 1
Query:    1 MLDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGADVIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGLAVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGREGEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAILGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSPDTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGRMGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEARSRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDTLGYSEERIAALRSAGA 1248
            MLD++ ++FP +TPRP+ APKAL+G++VVDFTHFIAGPFATM++ DMGADV+K+EAPGRGD+FR YPPVHPDL AQGAP+LWSNRNKRS AL++KTPEGL V R L ASADVV+ENFS+GVM RFGLDYES R+ NP+++YCSVSAYGR+G FADRLGFDPIAQAESGF+SMNGY DRQGVR LSPV+DISTA MACNAILGAL+AR RTG GQS+EV LFDNAVLMTGYA LQHVF+GA PQRHGNTSPDTCPSGVFE+ D+ FYINCGN+KIF RLM QV+ERPD+A DP  A    R  +R+ +F++L EAFA+QPW++WQ RMRAA +PCGEVR+VG+AIRSPEAR R LVTRI HP +GW+PN+ALPIRY  TP+ DP  AP VGQHT EVLR+ LGY +ER+A+L  AGA
Sbjct:    1 MLDDIASDFPEHTPRPAGAPKALDGIKVVDFTHFIAGPFATMMLGDMGADVLKIEAPGRGDDFRQYPPVHPDL-AQGAPFLWSNRNKRSVALDLKTPEGLEVARALAASADVVVENFSSGVMARFGLDYESIRRTNPEVVYCSVSAYGRDGAFADRLGFDPIAQAESGFVSMNGYADRQGVRALSPVMDISTAMMACNAILGALVARERTGRGQSMEVALFDNAVLMTGYATLQHVFSGAEPQRHGNTSPDTCPSGVFEAKDRSFYINCGNNKIFQRLMTQVIERPDVAADPAYATGRERSARREALFALLGEAFAQQPWTHWQARMRAAGVPCGEVRSVGEAIRSPEARERRLVTRIPHPAVGWVPNMALPIRYGRTPIADPVAAPTVGQHTHEVLREALGYGDERLASLAQAGA 415          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8618.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y2R3L3_9BURK3.600e-29592.09Carnitine dehydratase n=2 Tax=Comamonadaceae TaxID... [more]
UPI00131ABAD64.020e-27887.29CoA transferase n=1 Tax=Xenophilus sp. L33 TaxID=1... [more]
A0A6P2F1N6_9BURK4.030e-25878.29Succinyl-CoA:(R)-benzylsuccinate CoA-transferase s... [more]
A0A6P2FCN5_9BURK7.710e-25278.42Succinyl-CoA:(R)-benzylsuccinate CoA-transferase s... [more]
UPI00190DBF994.350e-24276.26CoA transferase n=1 Tax=Noviherbaspirillum pedocol... [more]
A0A6P2FAS9_9BURK4.510e-24277.11Succinyl-CoA:(R)-benzylsuccinate CoA-transferase s... [more]
UPI00190B741E1.770e-24176.33CoA transferase n=1 Tax=Noviherbaspirillum pedocol... [more]
A0A7V8G4X8_9BURK6.160e-23775.72Acetyl-CoA:oxalate CoA-transferase n=4 Tax=unclass... [more]
A0A2P8KQB8_9BURK3.420e-23676.20Carnitine dehydratase n=1 Tax=Variovorax sp. WS11 ... [more]
A0A679JUJ4_VARPD4.130e-23574.04Acetyl-CoA:oxalate CoA-transferase n=5 Tax=Variovo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8618contigP-wetherbeei_contig8618:352..1662 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog266265.Bxe_B2368
PFAMsCoA_transf_3
Model size1311
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.04e-229
EggNOG OGsCOG1804@1|root,COG1804@2|Bacteria,1MU2K@1224|Proteobacteria,2VMH9@28216|Betaproteobacteria,1KC99@119060|Burkholderiaceae
DescriptionCoA-transferase family III
Cds size1311
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187050.2799625-CDS-P-wetherbeei_contig8618:351..16621683187050.2799625-CDS-P-wetherbeei_contig8618:351..1662Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8618 352..1662 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8618.2.1prot_P-wetherbeei_contig8618.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8618 352..1662 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8618.2.1

>prot_P-wetherbeei_contig8618.2.1 ID=prot_P-wetherbeei_contig8618.2.1|Name=mRNA_P-wetherbeei_contig8618.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=437bp
MLDNLENEFPVYTPRPSNAPKALEGVRVVDFTHFIAGPFATMVMADMGAD
VIKVEAPGRGDEFRHYPPVHPDLPAQGAPYLWSNRNKRSAALNMKTPEGL
AVVRDLVASADVVMENFSTGVMERFGLDYESCRKLNPKLIYCSVSAYGRE
GEFADRLGFDPIAQAESGFISMNGYNDRQGVRTLSPVIDISTATMACNAI
LGALLARHRTGEGQSIEVTLFDNAVLMTGYAALQHVFTGAVPQRHGNTSP
DTCPSGVFESSDKPFYINCGNDKIFHRLMAQVLERPDLANDPVLADRNGR
MGKRDEIFSILNEAFAKQPWSYWQPRMRAASIPCGEVRNVGDAIRSPEAR
SRNLVTRIEHPVIGWLPNVALPIRYSGTPVVDPRPAPFVGQHTEEVLRDT
LGYSEERIAALRSAGALSASAPAARPAPAAPAEAEA*
back to top

mRNA from alignment at P-wetherbeei_contig8618:352..1662+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8618.2.1 ID=mRNA_P-wetherbeei_contig8618.2.1|Name=mRNA_P-wetherbeei_contig8618.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig8618:352..1662+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTGACAACCTGGAAAACGAGTTCCCCGTCTACACGCCGCGCCCGTC GAATGCGCCCAAGGCACTGGAAGGGGTTCGCGTGGTCGACTTCACCCACT TCATTGCCGGCCCGTTCGCCACCATGGTGATGGCCGACATGGGGGCCGAC GTGATCAAGGTGGAGGCGCCTGGGCGTGGTGACGAATTCCGGCACTACCC ACCGGTGCACCCCGATCTGCCGGCGCAGGGCGCACCCTACCTCTGGAGCA ACCGCAACAAGCGCAGCGCTGCGCTGAACATGAAGACGCCCGAAGGTCTG GCTGTGGTGCGTGACCTGGTGGCCTCGGCCGACGTGGTGATGGAAAACTT CTCCACCGGTGTGATGGAGCGCTTCGGCCTGGACTACGAGAGCTGCCGCA AGCTCAACCCCAAACTCATTTACTGCTCGGTGTCGGCCTACGGCCGCGAA GGCGAGTTCGCCGACCGCCTGGGCTTTGACCCGATTGCCCAGGCCGAGAG CGGCTTCATCTCGATGAACGGCTACAACGACCGCCAGGGCGTTCGCACAC TCTCGCCGGTGATCGACATCAGCACCGCCACCATGGCGTGCAATGCCATC CTGGGCGCGCTGCTCGCGCGCCACCGCACCGGCGAAGGCCAGTCGATCGA GGTGACGCTGTTTGATAACGCGGTGCTCATGACCGGCTACGCCGCGCTGC AGCACGTGTTTACCGGCGCGGTGCCGCAACGCCACGGCAACACCAGCCCC GACACCTGCCCCTCGGGCGTGTTCGAGTCGAGCGACAAGCCGTTCTATAT CAACTGCGGCAACGACAAGATCTTCCACCGCCTGATGGCGCAAGTGCTGG AACGCCCGGACCTGGCGAACGACCCGGTGCTGGCCGATCGCAACGGCCGC ATGGGCAAGCGCGATGAAATCTTCTCGATCCTCAACGAGGCCTTTGCCAA GCAGCCCTGGTCGTACTGGCAACCCCGCATGCGCGCGGCGTCCATTCCGT GCGGCGAGGTGCGCAACGTGGGCGATGCCATCCGTTCGCCCGAAGCGCGT TCGCGCAACCTGGTGACGCGCATCGAACACCCCGTCATCGGCTGGCTGCC CAACGTGGCGCTGCCGATCCGTTATTCGGGCACGCCCGTGGTCGACCCCA GGCCCGCGCCGTTCGTGGGCCAGCACACCGAAGAGGTGTTGCGCGACACG CTGGGCTACAGCGAAGAACGCATTGCGGCACTGCGCAGCGCCGGCGCCCT GAGCGCCAGTGCGCCGGCCGCCCGGCCCGCACCGGCCGCCCCGGCGGAAG CCGAGGCCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig8618:352..1662+

>mRNA_P-wetherbeei_contig8618.2.1 ID=mRNA_P-wetherbeei_contig8618.2.1|Name=mRNA_P-wetherbeei_contig8618.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig8618:352..1662+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTGACAACCTGGAAAACGAGTTCCCCGTCTACACGCCGCGCCCGTC
GAATGCGCCCAAGGCACTGGAAGGGGTTCGCGTGGTCGACTTCACCCACT
TCATTGCCGGCCCGTTCGCCACCATGGTGATGGCCGACATGGGGGCCGAC
GTGATCAAGGTGGAGGCGCCTGGGCGTGGTGACGAATTCCGGCACTACCC
ACCGGTGCACCCCGATCTGCCGGCGCAGGGCGCACCCTACCTCTGGAGCA
ACCGCAACAAGCGCAGCGCTGCGCTGAACATGAAGACGCCCGAAGGTCTG
GCTGTGGTGCGTGACCTGGTGGCCTCGGCCGACGTGGTGATGGAAAACTT
CTCCACCGGTGTGATGGAGCGCTTCGGCCTGGACTACGAGAGCTGCCGCA
AGCTCAACCCCAAACTCATTTACTGCTCGGTGTCGGCCTACGGCCGCGAA
GGCGAGTTCGCCGACCGCCTGGGCTTTGACCCGATTGCCCAGGCCGAGAG
CGGCTTCATCTCGATGAACGGCTACAACGACCGCCAGGGCGTTCGCACAC
TCTCGCCGGTGATCGACATCAGCACCGCCACCATGGCGTGCAATGCCATC
CTGGGCGCGCTGCTCGCGCGCCACCGCACCGGCGAAGGCCAGTCGATCGA
GGTGACGCTGTTTGATAACGCGGTGCTCATGACCGGCTACGCCGCGCTGC
AGCACGTGTTTACCGGCGCGGTGCCGCAACGCCACGGCAACACCAGCCCC
GACACCTGCCCCTCGGGCGTGTTCGAGTCGAGCGACAAGCCGTTCTATAT
CAACTGCGGCAACGACAAGATCTTCCACCGCCTGATGGCGCAAGTGCTGG
AACGCCCGGACCTGGCGAACGACCCGGTGCTGGCCGATCGCAACGGCCGC
ATGGGCAAGCGCGATGAAATCTTCTCGATCCTCAACGAGGCCTTTGCCAA
GCAGCCCTGGTCGTACTGGCAACCCCGCATGCGCGCGGCGTCCATTCCGT
GCGGCGAGGTGCGCAACGTGGGCGATGCCATCCGTTCGCCCGAAGCGCGT
TCGCGCAACCTGGTGACGCGCATCGAACACCCCGTCATCGGCTGGCTGCC
CAACGTGGCGCTGCCGATCCGTTATTCGGGCACGCCCGTGGTCGACCCCA
GGCCCGCGCCGTTCGTGGGCCAGCACACCGAAGAGGTGTTGCGCGACACG
CTGGGCTACAGCGAAGAACGCATTGCGGCACTGCGCAGCGCCGGCGCCCT
GAGCGCCAGTGCGCCGGCCGCCCGGCCCGCACCGGCCGCCCCGGCGGAAG
CCGAGGCCTGA
back to top