mRNA_P-wetherbeei_contig8618.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: A0A1Y2R4R9_9BURK (SnoaL-like domain-containing protein n=2 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R4R9_9BURK) HSP 1 Score: 132 bits (332), Expect = 1.240e-37 Identity = 64/75 (85.33%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 1 LPAPTSRYTPANALDYLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
LPAPTS PA+ALDYLL DAIRQTKARYCRYIDTKQW+RL+SIFT DC FEGLGSAP GADVAMFVQGVSSRL
Sbjct: 3 LPAPTSPAQPADALDYLLSADAIRQTKARYCRYIDTKQWDRLASIFTDDCRFEGLGSAPAGADVAMFVQGVSSRL 77
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: UPI00131BA838 (nuclear transport factor 2 family protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131BA838) HSP 1 Score: 112 bits (281), Expect = 5.760e-30 Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query: 1 LPAPTSRYTPANALDYLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
+PAP Y P + +DYLL DAIRQ KARYCRYIDTKQW+RL S+FT DC FEGLGSAPPGADVA FV GVSSRL
Sbjct: 1 MPAP---YRP-DPVDYLLSADAIRQVKARYCRYIDTKQWDRLGSLFTPDCRFEGLGSAPPGADVATFVAGVSSRL 71
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: A0A1I5NVM4_9BURK (SnoaL-like domain-containing protein n=1 Tax=Variovorax sp. 770b2 TaxID=1566271 RepID=A0A1I5NVM4_9BURK) HSP 1 Score: 112 bits (280), Expect = 1.100e-29 Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 10 PTSRYTPANALDYLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
P S + +DYLL VDAIRQ KARYCR+IDTKQWERL ++FT DC FEGLGSAPPGADVA FV GVSSRL
Sbjct: 6 PVSAPASIDPVDYLLSVDAIRQVKARYCRFIDTKQWERLGALFTPDCRFEGLGSAPPGADVAAFVAGVSSRL 77
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: UPI00097C5C4E (nuclear transport factor 2 family protein n=1 Tax=Variovorax sp. KK3 TaxID=1855728 RepID=UPI00097C5C4E) HSP 1 Score: 100 bits (250), Expect = 2.730e-25 Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 37 ALDYLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
+L LL AI +TKARYCRYIDTKQW+RL+S+FT+DC FEGLGSAP GADVA FVQGVS+RL
Sbjct: 7 SLQRLLDAQAIAETKARYCRYIDTKQWQRLASLFTADCRFEGLGSAPAGADVATFVQGVSTRL 69
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: A0A6P2FAL5_9BURK (Bile acid 7-alpha dehydratase n=1 Tax=Variovorax sp. PBS-H4 TaxID=434008 RepID=A0A6P2FAL5_9BURK) HSP 1 Score: 100 bits (249), Expect = 5.110e-25 Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 1
Query: 46 YLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
+LL + I Q KARYCRYIDTKQW+RL S+FT DC FEGLGSAPPGADVA FVQGVS+RL
Sbjct: 8 HLLSFEQIAQLKARYCRYIDTKQWDRLPSVFTDDCSFEGLGSAPPGADVATFVQGVSTRL 67
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: A0A7W5DFP5_9BURK (SnoaL-like domain-containing protein n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A7W5DFP5_9BURK) HSP 1 Score: 100 bits (248), Expect = 5.340e-25 Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 40 LDYLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
L LL AI +TKARYCRYIDTKQW RL+S+FT DC FEGLGSAP GADVA FVQGVS+RL
Sbjct: 8 LQRLLAAQAIAETKARYCRYIDTKQWSRLASLFTPDCRFEGLGSAPAGADVATFVQGVSTRL 69
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: A0A6P2F2T5_9BURK (Bile acid 7-alpha dehydratase n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2F2T5_9BURK) HSP 1 Score: 97.8 bits (242), Expect = 5.250e-24 Identity = 45/60 (75.00%), Postives = 49/60 (81.67%), Query Frame = 1
Query: 46 YLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
YLL ++ IR KARYCRYIDTKQW RL S+FT DC FEGLGSAP GADVA FV GVS+RL
Sbjct: 8 YLLSMERIRSVKARYCRYIDTKQWTRLPSLFTEDCRFEGLGSAPAGADVATFVSGVSARL 67
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: A0A244E8K9_9BURK (SnoaL-like domain-containing protein n=2 Tax=Variovorax sp. JS1663 TaxID=1851577 RepID=A0A244E8K9_9BURK) HSP 1 Score: 97.8 bits (242), Expect = 8.700e-24 Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 46 YLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
+LL ++ I Q KARYCRYIDTKQWE+L+S+FT DC FEGLGSAP GADVA FV+GVS+RL
Sbjct: 25 HLLALEHIAQLKARYCRYIDTKQWEKLASVFTQDCRFEGLGSAPAGADVATFVKGVSARL 84
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: Q13HM1_PARXL (SnoaL-like domain-containing protein n=1 Tax=Paraburkholderia xenovorans (strain LB400) TaxID=266265 RepID=Q13HM1_PARXL) HSP 1 Score: 94.4 bits (233), Expect = 1.110e-22 Identity = 40/62 (64.52%), Postives = 53/62 (85.48%), Query Frame = 1
Query: 40 LDYLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSRL 225
L YL+ V+AI+ TKARYCR++DTKQW+RL ++FT+DC FEGLGSAP AD+ +F+QG+S RL
Sbjct: 9 LAYLMAVNAIQMTKARYCRFVDTKQWDRLRTLFTADCRFEGLGSAPDRADLDIFIQGISRRL 70
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Match: UPI00131D67B0 (nuclear transport factor 2 family protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131D67B0) HSP 1 Score: 83.6 bits (205), Expect = 1.680e-18 Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 1
Query: 34 NALDYLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCHFEGLGSAPPGADVAMFVQGVSSR 222
++L++LL +++IRQ KARYCR+IDTKQW+RL +FT DC F+G+G ADV FV GVS R
Sbjct: 4 DSLEHLLAIESIRQLKARYCRWIDTKQWQRLPELFTDDCTFDGMGWGDSNADVHAFVSGVSKR 66 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8618.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8618.1.1 >prot_P-wetherbeei_contig8618.1.1 ID=prot_P-wetherbeei_contig8618.1.1|Name=mRNA_P-wetherbeei_contig8618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=75bp LPAPTSRYTPANALDYLLCVDAIRQTKARYCRYIDTKQWERLSSIFTSDCback to top mRNA from alignment at P-wetherbeei_contig8618:2..226- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8618.1.1 ID=mRNA_P-wetherbeei_contig8618.1.1|Name=mRNA_P-wetherbeei_contig8618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=225bp|location=Sequence derived from alignment at P-wetherbeei_contig8618:2..226- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8618:2..226- >mRNA_P-wetherbeei_contig8618.1.1 ID=mRNA_P-wetherbeei_contig8618.1.1|Name=mRNA_P-wetherbeei_contig8618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=225bp|location=Sequence derived from alignment at P-wetherbeei_contig8618:2..226- (Phaeothamnion wetherbeei SAG_119_79)back to top |