mRNA_P-wetherbeei_contig861.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig861.4.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE) HSP 1 Score: 259 bits (662), Expect = 4.500e-68 Identity = 310/977 (31.73%), Postives = 377/977 (38.59%), Query Frame = 1
Query: 94 PPFFVSTAWRRACALRQWAKSVRDKGAGVGGDVAAMAAAGAGSNGALPASSAASAFSYEATASQLLERVDFLLSLAPCCPDQPVQFMLHDFCQLSEREARAQ----------------------------PLHGGRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSGGLDTGGAALHRQGLIRHLEERQAETLALVTAFLKSPLDLPSLRAAQEAATQRAYLRETGLRALRGLLETSGGIGGGYGGSSFAXXXXXXXXXXXRGLPGARAALLLQLPAALRGVLHFRASLGPDVVSLRRYALAEAAAVATAGTAAAAAIVGQPLRDEAAAMLQGGHYLTGLDGCERPAALAVRGAFESLYGFLAEELSAETEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAAGARDDVSLRLVLVDVWGIVVREADHCMLARVRIFNILQSLLDSSVRRRSSRGXXXXXXSGCGFXXXXXGGSSGSLAPRLGGVWRRTSDFG---------------------------DLVSPREEPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIACFDGG--------VGGSKHLLTQAAMKLVYLLAMQVATSGSGSXXXXXXXXXXXXXXXXGLLTADGSRIGXXXXXXXXXXXLHGTPALAPALTRAQSGPATLSASVFDMLYVELRGVLEDIQRRRXXXXXCAALAGAVAGDGA------------------------------------NGAGAEKVGDGGKSTVA------AAASEAGVAARTMEATAAMAATLTPTTAKAASEGKEGAADAEVATLRRLAGLADDVQCRELSVEAQVLVSEVTMLLLCVSGAESCRLYLSRPRWLAVLLWLLRQGPPYAQRRALRLLRRLLPLCCPVDLGE------AVTDPSWSILGIVKEPTA 2691
PP+F+ WR+A L+ WAKS RD+G YE TA+ L + FLLSL P D+PV +++ +F + A A+ P RG XXXXXXXXXXX G + GGA L+R LE R AE L+LVT FLK +DL LRA+Q AA +RA R GLRALR LL ++G G G +AALLL +P ALRGVLH A+LGPD ++L+ A A A G ++GQ L L GGHYL GL GC R A VRGAFE LY FLA EL A + D L+ L+D WG+ V E DH +LARVRIFNILQ +LDS+++ GG S ++ R V R D +S ++ D XXXXXXXXX H LTQ AMKLVYLLA+QVATSG + G+ +D S G P AP L RA+SGPATLS +VF+MLYV+LR VL +++ R A A A+ A + G E G GKS A + EA + KE + A RLA + DD+ C +LS E QVLVSEVTMLLLCVS CR LS+PRW+AVLL LLR GPPYAQRRALRLLRRLLP C P L + A WSI+ IVKE A
Sbjct: 3005 PPYFLLETWRKAAGLKSWAKSRRDRGT-----------------------------PYETTAADLAQHCRFLLSLHPATGDRPVGWLVQEFKAFASAAATAEEGXXXXXXXXXXXXXXXXTVPAIPLRRSPSPSRRGFPPAARSLSGGSXXXXXXXXXXXGRRWGGGFPSVSEAGGAG----SLLRALETRHAERLSLVTGFLKGGVDLCRLRASQIAADERARRRAAGLRALRSLLGSTG----------------------REGSSGVKAALLLYVPPALRGVLHGLAALGPDPIALQMAREAAARASRPGGGTGMGLLMGQYLDSRP---LPGGHYLAGLAGCPRYTAQEVRGAFEKLYSFLAGELET-----------------------------------------------------------------------------------------AAQQGDAPLQFALMDAWGVEVHEDDHDLLARVRIFNILQEILDSTIKHSPG------------------GGLSTAMDTRPAAVTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXQEASVDTLSAEQQRDDATAPSEATAASDRAEEGDXXXXXXXXXXXXXXXXXXXXXXXEELAAAESHSLTQGAMKLVYLLAIQVATSGEEAGGSGS-----------GISASDHSAPG---------------PFRAPQLVRARSGPATLSHAVFEMLYVQLRNVLGGLRKARASRARERARAKALEASNARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKGTESEGADGKSETADGVVDVSGGEEASPTXXXXXXXXXXXXXXXXXXXXXXXDEKE---KKQKAVFERLADMRDDIGCLKLSRELQVLVSEVTMLLLCVSSTGPCRSLLSQPRWIAVLLGLLRLGPPYAQRRALRLLRRLLPHCDPESLADKDDGAVAADGTDWSIVTIVKESKA 3787
BLAST of mRNA_P-wetherbeei_contig861.4.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI) HSP 1 Score: 250 bits (639), Expect = 3.720e-65 Identity = 254/719 (35.33%), Postives = 304/719 (42.28%), Query Frame = 1
Query: 577 ERQAETLALVTAFLKSPLDLPSLRAAQEAATQRAYLRETGLRALRGLLETSGGIGGGYGGSSFAXXXXXXXXXXXRGLPGARAALLLQLPAALRGVLHFRASLGPDVVSLRRYALAEAAAVATAGTAAAAAIVGQPLRDEAAAMLQGGHYLTGLDGCERPAALAVRGAFESLYGFLAEELSAETEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAAGARDDVSLRLVLVDVWGIVVREADHCMLARVRIFNILQSLLDSSVRRRSSRGXXXXXXS--GCGFXXXXXGGSSGSLAPRLGGVWRRTSDFGDLVSPREE------PDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIACFDGGVGGSKHLLTQAAMKLVYLLAMQVATSGSGSXXXXXXXXXXXXXXXXGLLTADGSRIGXXXXXXXXXXXLHGTPALAPALTRAQSGPATLSASVFDMLYVELRGVLEDIQRRRXXXXXCAALAGAVAGDGANGAGAEKVGDGGKSTVAAAASEAGVAARTMEATAAMAATLTPTTAKAASEGKEGAADAEVATLRRLAGLADDVQCRELSVEAQVLVSEVTMLLLCVSGAESCRLYLSRPRWLAVLLWLLRQGPPYAQRRALRLLRRLLPLCCPVDLGE------AVTDPSWSILGIVKEPTA 2691
+R AE L+LVT FLK +DL LRA+Q AA +RA R GLRALR LL ++G G G +AALLL +P ALRGVLH A+LGPD ++L+ A A A G ++GQ L L GGHYL GL GC R A VRGAFE LY FLA EL A + D L+ L+D WG+ V E DH +LARVRIFNILQ +LDS+++ G + XXXXX D +S ++ P XXXXXXXXXXXXXXX + H LTQ AMKLVYLLA+QVATSG + G+ +D S G P AP L RA+SGPATLS +VF+MLYV+LR VL++ GG+S A +G + + E A RLA + DD+ C +LS E QVLVSEVTMLLLCVS + CR LS+PRW+AVLL LLR GPPYAQRRALRLLRRLLP C P L E A WSI+ IVKE A
Sbjct: 2859 DRHAERLSLVTGFLKGGVDLCRLRASQIAADERARRRAAGLRALRSLLGSTG----------------------REGSSGVKAALLLYVPPALRGVLHGLAALGPDPIALQMAREAAARASRPGGGTGMGLLMGQYLDSRP---LPGGHYLAGLAGCPRYTAQEVRGAFEKLYSFLAGELET-----------------------------------------------------------------------------------------AAQQGDTPLQFALMDAWGVEVHEDDHDLLARVRIFNILQEILDSTIKHSPDGGPSTVMDTRPAAATXXXXXXXXXXXXXXXXXXXXXXQEASVDTLSAEQQRDDATAPSEATAASDRAEEGDXXXXXXXXXXXXXXXXXXXXXEELAAAESHSLTQGAMKLVYLLAIQVATSGEEAAGGGS-----------GISASDHSAPG---------------PFRAPQLVRARSGPATLSHAVFEMLYVQLRNVLDE---------------------------------GGESGT-------------------------------AEDGLDEKEEEEKAVFERLADMRDDIGCLKLSRELQVLVSEVTMLLLCVSSTDPCRSLLSQPRWIAVLLGLLRLGPPYAQRRALRLLRRLLPHCDPESLAEKDDGAVAADGTDWSIVTIVKESKA 3373
BLAST of mRNA_P-wetherbeei_contig861.4.1 vs. uniprot
Match: A0A7S3UZV6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZV6_HETAK) HSP 1 Score: 53.1 bits (126), Expect = 8.010e-5 Identity = 43/101 (42.57%), Postives = 50/101 (49.50%), Query Frame = 1
Query: 1825 LTQAAMKLVYLLAMQVATSGSGSXXXXXXXXXXXXXXXXGLLTADGSRIGXXXXXXXXXXXLHGTPALAPALT--RAQSGPATLSASVFDMLYVELRGVLE 2121
LT+AAMKL+YLLA+QVATSG G+ T+ GS L G P ALT R SGPATLS SVF +LY +L LE
Sbjct: 1 LTRAAMKLLYLLALQVATSGEGTRNSSSLQRS----------TSWGSM------GFGQVTSLAGPPPPPAALTLQRTMSGPATLSQSVFTLLYTQLSSALE 85 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig861.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig861.4.1 >prot_P-wetherbeei_contig861.4.1 ID=prot_P-wetherbeei_contig861.4.1|Name=mRNA_P-wetherbeei_contig861.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=899bp LAAAVHGGGTGGVGGGGGGSAAAAAAAERGAPPFFVSTAWRRACALRQWAback to top mRNA from alignment at P-wetherbeei_contig861:5734..8431+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig861.4.1 ID=mRNA_P-wetherbeei_contig861.4.1|Name=mRNA_P-wetherbeei_contig861.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2698bp|location=Sequence derived from alignment at P-wetherbeei_contig861:5734..8431+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig861:5734..8431+ >mRNA_P-wetherbeei_contig861.4.1 ID=mRNA_P-wetherbeei_contig861.4.1|Name=mRNA_P-wetherbeei_contig861.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2697bp|location=Sequence derived from alignment at P-wetherbeei_contig861:5734..8431+ (Phaeothamnion wetherbeei SAG_119_79)back to top |