mRNA_P-wetherbeei_contig8592.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8592.1.1
Unique NamemRNA_P-wetherbeei_contig8592.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A836C8U0_9STRA (Diacylglycerol acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8U0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 4.520e-75
Identity = 116/198 (58.59%), Postives = 148/198 (74.75%), Query Frame = 1
Query:    1 LTLHRLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVDLGVVFGQPVEVPIVTDPTDDQ 594
            L + RLA LDPSK+YVFG HPHG LVLSR A  GP W  LFPG++TRTLAATP+F  P  RE+ L LGAVDA R  AA +L +G S++L+PGG+REIF    + KETVL L+RRLGFI+LA+++GA LVP F FGEK+AY+++  P  VWR  LR FK P++ FWGR+FT  P RV LG+V G+P+EV   ++P+ D+
Sbjct:   64 LKVERLAELDPSKQYVFGLHPHGILVLSRAATYGPVWPTLFPGIDTRTLAATPLFQAPLVREICLWLGAVDARRAVAAKILAQGTSILLYPGGSREIFTTDGDSKETVLELSRRLGFIRLAVQSGASLVPVFTFGEKWAYSRVMAPRRVWRAALRYFKFPLIAFWGRWFTCTPRRVRLGMVVGRPIEVKQCSEPSVDE 261          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A6G0WX67_9STRA (Acyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX67_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.240e-69
Identity = 110/202 (54.46%), Postives = 149/202 (73.76%), Query Frame = 1
Query:    1 LTLHRLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVD----LGVVFGQPVEVPIVTDPTDDQ 594
            + L R A LDP+K+YVFG+HPHG L+LSR++    ++++LFPG+++RTLAATP+FY P +RE+SLAL AVDA R+ A  +L +  S++++PGG++EIF   PN KET L L  RLGFIKLA+R GA LVPTFVFGEK+ YN  + P+ V    L+  K+P+L+FWGR FTWLP R+      GVVFG+P+ V    DPTD++
Sbjct:  114 VELIREAELDPAKQYVFGYHPHGILILSRVSTYAGNFEKLFPGIDSRTLAATPMFYVPMSRELSLALTAVDASRKNAERILQKKFSVIVYPGGSKEIFLTDPNSKETTLVLNDRLGFIKLAVRHGAELVPTFVFGEKWMYNIWNPPQSVRSFFLKTLKVPLLLFWGRCFTWLPLRLTGKRKFGVVFGKPIPVDKKEDPTDEE 315          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A1V9ZET2_9STRA (Acyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZET2_9STRA)

HSP 1 Score: 220 bits (560), Expect = 5.640e-68
Identity = 107/198 (54.04%), Postives = 143/198 (72.22%), Query Frame = 1
Query:   13 RLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVD----LGVVFGQPVEVPIVTDPTDDQ 594
            R   LDP K+YVF +HPHG LVLSR++    ++D LFPG+E R L ATP+FY P  RE+ L L AVDA R TA  +LD   S++++PGG++EIF  +PN KETVL L +RLGFIKLA++ GA LVP FVFGEK+ YN  + P+ V   VL+ FK+P+L+FWGRF TW+P+++     LGVV+G+P+ V    DPTD++
Sbjct:  110 REQELDPKKQYVFAYHPHGILVLSRLSYYAGNFDALFPGIEARVLGATPMFYVPLGREICLWLDAVDASRSTAQKVLDNNLSIIVYPGGSKEIFQTNPNSKETVLVLNKRLGFIKLAVKNGAELVPIFVFGEKWMYNMWNPPKSVTEAVLQCFKVPMLLFWGRFCTWMPYQLTGKRKLGVVYGKPIPVDKKEDPTDEE 307          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A067BYZ2_SAPPC (Acyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYZ2_SAPPC)

HSP 1 Score: 218 bits (554), Expect = 4.270e-67
Identity = 106/201 (52.74%), Postives = 146/201 (72.64%), Query Frame = 1
Query:    1 LTLHRLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVD----LGVVFGQPVEVPIVTDPTDD 591
            L + R   LD +K+Y+FGFHPHG LVLSR++    +W+Q+ PG+E R L ATP+FY P  RE+ L LGAVDA R TA  +LD+  S+V++PGG++EIF  +PN K+T L L +RLGFIKLA++ GA LVPTFVFGEK+ YN  + P+ +  TVL++ K+P+L+FWGR+ TW+P R+     +G+V+G P+ V    DPTDD
Sbjct:  104 LEIVREQELDAAKQYIFGFHPHGILVLSRMSCYAGNWEQVHPGIEVRALGATPMFYVPLGRELCLWLGAVDASRSTAQKVLDKKLSIVVYPGGSKEIFLTNPNIKQTELVLKKRLGFIKLAIKNGADLVPTFVFGEKWMYNLWNPPKGLRATVLQVLKVPLLLFWGRWCTWVPLRLAGKRRMGIVYGTPIAVEQKDDPTDD 304          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: C1E2R3_MICCC (Acyltransferase n=2 Tax=Micromonas TaxID=38832 RepID=C1E2R3_MICCC)

HSP 1 Score: 212 bits (539), Expect = 1.290e-64
Identity = 103/193 (53.37%), Postives = 137/193 (70.98%), Query Frame = 1
Query:   25 LDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVDLGVVFGQPVEVPIV---TDPTDDQ 594
            LDP+K+YVFG+HPHG L+LSRI + G  W+ LFPGV+ R L A+P+F  PG RE+ L +GAVDAGR+TA  +L  GKS+ ++PGG+ EIF   PN +ET  +L RR GF+KLA+  GA LVP FVFGEK  Y ++++P  V   +LR  K+P++VFWGR+FTW P      VVFG P+E P +   T+PT+ Q
Sbjct:  131 LDPTKKYVFGWHPHGILILSRIHVYGGVWETLFPGVDVRVLGASPMFKVPGCREICLWMGAVDAGRKTAERVLRAGKSMAVYPGGSVEIFDTDPNSRETRCHLARRKGFVKLAIAHGASLVPVFVFGEKRCYRRLNVPSKVRHWLLRTLKIPLIVFWGRWFTWYPIASPQTVVFGAPIEAPELDPGTEPTETQ 323          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A7S0CYJ9_MICPS (Acyltransferase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CYJ9_MICPS)

HSP 1 Score: 210 bits (535), Expect = 5.910e-64
Identity = 99/186 (53.23%), Postives = 132/186 (70.97%), Query Frame = 1
Query:    4 TLHRLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVDLGVVFGQPVE 561
            TL R  +LDP K+YVFG+HPHG L+LSRI   G +W+ LFPGV+ R L ATP+FY PG RE+ L +GAVDAGR+TA  +L  G S+ ++PGG+REIF   P  + TV  L RR GF++LA++ GA LVP FVFGEK  Y ++++P      +L+  K+P++VFWGRF TW PF+    VVFG P++
Sbjct:  122 TLRRTTKLDPKKKYVFGWHPHGILILSRIHTYGGNWEALFPGVKFRVLGATPMFYVPGCREICLWMGAVDAGRKTAERVLKSGLSVSVYPGGSREIFETDPKSRNTVAVLRRRKGFVRLAIKNGAELVPVFVFGEKKCYKRLNVPAKARDFLLKTLKIPLIVFWGRFGTWYPFKARQTVVFGAPIK 307          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A024U2I0_9STRA (Acyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2I0_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.060e-63
Identity = 104/202 (51.49%), Postives = 143/202 (70.79%), Query Frame = 1
Query:    1 LTLHRLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVD----LGVVFGQPVEVPIVTDPTDDQ 594
            L + R A LDP+K+YVF +HPHG L+LSRI+    ++++LFPG+  R L ATP+F+ P ARE+ L L AVDA R+ A  +L E  S++++PGG++EIF   PN K+T L L +RLGFIKLA+R GA +VPTFVFGEK+ YN  + P+ V    L   K+P+L+FWGRFFTWLP R+      GVVFG+P+ V    +P++D+
Sbjct:  123 LEIVREAALDPTKQYVFAYHPHGILILSRISTYAGNFEKLFPGIVARALGATPMFFIPMAREICLWLAAVDASRKNAERILKEKMSVIVYPGGSKEIFLTDPNSKQTTLVLNKRLGFIKLAVRYGADVVPTFVFGEKWMYNIWNPPQSVRHFFLSTLKVPLLLFWGRFFTWLPKRLTGKRRFGVVFGKPIPVTQNENPSEDE 324          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A067C2Z5_SAPPC (Acyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2Z5_SAPPC)

HSP 1 Score: 207 bits (528), Expect = 3.340e-63
Identity = 103/198 (52.02%), Postives = 138/198 (69.70%), Query Frame = 1
Query:   13 RLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVD----LGVVFGQPVEVPIVTDPTDDQ 594
            R   LD +K+YVF +HPHG LVLSR++    ++D LFPG+  R LAATP+FY P  RE+ L L AVDA R TA  +LD   S++++PGG++EIF  +PN KETVL L  RLGFIKLA++ G  LVP FVFGEK+ YN  + P+ V    L   K+P+L+FWGRF TW+P+++     LGVV+G+P+ V    +PTDD+
Sbjct:  106 REEALDATKQYVFAYHPHGILVLSRLSYYAGNFDALFPGIHARVLAATPMFYVPLGREICLWLDAVDASRATAQKVLDNKLSIIVYPGGSKEIFQTNPNSKETVLVLNHRLGFIKLAIKNGVELVPIFVFGEKWMYNMWNPPKSVTEAFLTYLKVPMLLFWGRFCTWMPYQLTGKRKLGVVYGKPIPVQQSDNPTDDE 303          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A1V9Y8D3_9STRA (Acyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8D3_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.720e-62
Identity = 100/201 (49.75%), Postives = 142/201 (70.65%), Query Frame = 1
Query:    1 LTLHRLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVD----LGVVFGQPVEVPIVTDPTDD 591
            L + R   LDP K+Y+FGFHPHG LVLSR++    +W+ + PG+E R L ATP+F+ P  RE+ L LGAVDA R TA  +LD   S++++PGG++EIF  +PN K+T L L +RLGFIKLA++ GA LVPTFVFGEK+     + P+ + +  L++ K+P+L+FWGR+ TW+P R+     +GVV+G+P+ V    DPTD+
Sbjct:  112 LEMIREVELDPKKQYIFGFHPHGILVLSRLSCYAGNWEGVHPGIEVRALGATPMFFVPLGRELCLWLGAVDASRSTAQNVLDNKLSIIVYPGGSKEIFLTNPNTKQTELVLNKRLGFIKLAIKNGADLVPTFVFGEKWMLW--NPPQSLRQAALQVLKVPLLLFWGRWCTWVPLRLSGNRRMGVVYGKPIVVEQKDDPTDE 310          
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Match: A0A485KMA5_9STRA (Acyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMA5_9STRA)

HSP 1 Score: 205 bits (521), Expect = 9.830e-62
Identity = 101/198 (51.01%), Postives = 138/198 (69.70%), Query Frame = 1
Query:   13 RLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLAATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCNSPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVWRTVLRIFKMPVLVFWGRFFTWLPFRVD----LGVVFGQPVEVPIVTDPTDDQ 594
            R A+LDPSK+YVFG HPHG L+L+R++  G  ++ LFPG++ R L ATP+FY P ARE+S A+ AVDA  + AA +L+   S +++PGG++EIF   P  KET L L+ RLGF+KLA+R GA LVP F FGEK+ YN  + P+ V    L+  K+P LVFWGRF TW+P R+      GVV+G+P+ V    +PTD++
Sbjct:  124 REAKLDPSKQYVFGGHPHGILILNRLSTFGGHFETLFPGIKARLLGATPMFYIPLARELSFAMNAVDASAKNAARVLNSKISCIVFPGGSKEIFLTDPKSKETTLVLSDRLGFVKLAIRHGADLVPFFAFGEKWIYNMWNPPKSVRHFFLQTIKVPFLVFWGRFGTWMPLRLTGNRRFGVVYGKPISVTKNENPTDEE 321          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8592.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8U0_9STRA4.520e-7558.59Diacylglycerol acyltransferase n=1 Tax=Tribonema m... [more]
A0A6G0WX67_9STRA6.240e-6954.46Acyltransferase n=1 Tax=Aphanomyces euteiches TaxI... [more]
A0A1V9ZET2_9STRA5.640e-6854.04Acyltransferase n=1 Tax=Achlya hypogyna TaxID=1202... [more]
A0A067BYZ2_SAPPC4.270e-6752.74Acyltransferase n=2 Tax=Saprolegnia TaxID=4769 Rep... [more]
C1E2R3_MICCC1.290e-6453.37Acyltransferase n=2 Tax=Micromonas TaxID=38832 Rep... [more]
A0A7S0CYJ9_MICPS5.910e-6453.23Acyltransferase n=1 Tax=Micromonas pusilla TaxID=3... [more]
A0A024U2I0_9STRA1.060e-6351.49Acyltransferase n=1 Tax=Aphanomyces invadans TaxID... [more]
A0A067C2Z5_SAPPC3.340e-6352.02Acyltransferase n=2 Tax=Saprolegnia TaxID=4769 Rep... [more]
A0A1V9Y8D3_9STRA4.720e-6249.75Acyltransferase n=1 Tax=Thraustotheca clavata TaxI... [more]
A0A485KMA5_9STRA9.830e-6251.01Acyltransferase n=1 Tax=Aphanomyces stellatus TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8592contigP-wetherbeei_contig8592:1586..2485 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008603915.1
PFAMsDAGAT
Model size594
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00037
KEGG koko:K14457,ko:K14458
KEGG ReactionR03755,R03756
KEGG Pathwayko00561,ko04975,map00561,map04975
Hectar predicted targeting categorymitochondrion
Exons2
Evalue1.98e-67
EggNOG OGsKOG0831@1|root,KOG0831@2759|Eukaryota
EC2.3.1.22
Description2-acylglycerol O-acyltransferase activity
Cds size594
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187048.7876904-CDS-P-wetherbeei_contig8592:1585..19031683187048.7876904-CDS-P-wetherbeei_contig8592:1585..1903Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8592 1586..1903 +
1683187048.80122-CDS-P-wetherbeei_contig8592:2209..24851683187048.80122-CDS-P-wetherbeei_contig8592:2209..2485Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8592 2210..2485 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8592.1.1prot_P-wetherbeei_contig8592.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8592 1586..2485 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8592.1.1

>prot_P-wetherbeei_contig8592.1.1 ID=prot_P-wetherbeei_contig8592.1.1|Name=mRNA_P-wetherbeei_contig8592.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=198bp
LTLHRLARLDPSKRYVFGFHPHGNLVLSRIALVGPSWDQLFPGVETRTLA
ATPIFYFPGAREMSLALGAVDAGRQTAAAMLDEGKSLVLWPGGNREIFCN
SPNRKETVLYLTRRLGFIKLAMRAGAPLVPTFVFGEKFAYNQIDMPEFVW
RTVLRIFKMPVLVFWGRFFTWLPFRVDLGVVFGQPVEVPIVTDPTDDQ
back to top

mRNA from alignment at P-wetherbeei_contig8592:1586..2485+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8592.1.1 ID=mRNA_P-wetherbeei_contig8592.1.1|Name=mRNA_P-wetherbeei_contig8592.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig8592:1586..2485+ (Phaeothamnion wetherbeei SAG_119_79)
CTGACGCTGCATCGTCTGGCGCGCTTGGATCCATCCAAGCGCTACGTCTT CGGCTTTCACCCCCACGGCAACCTCGTCCTATCCCGCATAGCGCTCGTCG GCCCTTCCTGGGACCAACTCTTCCCGGGAGTCGAGACGCGGACGTTAGCG GCGACACCCATCTTTTACTTCCCGGGGGCCCGCGAGATGAGCCTGGCCCT GGGGGCGGTGGACGCGGGGCGGCAGACAGCGGCGGCGATGCTCGATGAGG GCAAGTCCCTTGTGCTCTGGCCCGGCGGCAACCGCGAGATCTTCTGCAAC TCGCCCAACCGCAAAGAGGTGTGTATTGTTGACCTGCGGTTTTATACCTG TGGTCGGAAGGAATACGTTTTTGGTCTACTTCGGTTTAAAATGCTTCTGC TCTGGGCCATTGTAGTCTTGAATGGGTACTTTCGGCTGATCCCCTATTTG TTCTTGCGATACGGATTGGAGTGGATGGGCGACGGATCCTCTATATATGC AGCCCATGTACAATTGGCTGCTGCTCTCCCGTTGCATTCTTGCCCTGCCA TTGCCGACATGTCCTGCCACAGTACTTGACGTCCACCACTGCCGCGGCCT CCACGCTTCCAATCGCGGTGACAGACCGTGCTATATCTGACGCGCCGCCT GGGCTTCATCAAGCTCGCCATGCGCGCCGGAGCGCCACTTGTGCCCACAT TCGTCTTTGGGGAAAAGTTCGCATACAATCAGATCGACATGCCGGAGTTC GTATGGCGCACCGTGCTGCGCATCTTCAAGATGCCCGTCTTGGTGTTTTG GGGCCGTTTCTTTACATGGCTGCCGTTCCGCGTTGACCTCGGCGTCGTTT TTGGGCAGCCGGTCGAGGTGCCCATTGTCACCGACCCCACCGACGATCAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig8592:1586..2485+

>mRNA_P-wetherbeei_contig8592.1.1 ID=mRNA_P-wetherbeei_contig8592.1.1|Name=mRNA_P-wetherbeei_contig8592.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig8592:1586..2485+ (Phaeothamnion wetherbeei SAG_119_79)
CTGACGCTGCATCGTCTGGCGCGCTTGGATCCATCCAAGCGCTACGTCTT
CGGCTTTCACCCCCACGGCAACCTCGTCCTATCCCGCATAGCGCTCGTCG
GCCCTTCCTGGGACCAACTCTTCCCGGGAGTCGAGACGCGGACGTTAGCG
GCGACACCCATCTTTTACTTCCCGGGGGCCCGCGAGATGAGCCTGGCCCT
GGGGGCGGTGGACGCGGGGCGGCAGACAGCGGCGGCGATGCTCGATGAGG
GCAAGTCCCTTGTGCTCTGGCCCGGCGGCAACCGCGAGATCTTCTGCAAC
TCGCCCAACCGCAAAGAGACCGTGCTATATCTGACGCGCCGCCTGGGCTT
CATCAAGCTCGCCATGCGCGCCGGAGCGCCACTTGTGCCCACATTCGTCT
TTGGGGAAAAGTTCGCATACAATCAGATCGACATGCCGGAGTTCGTATGG
CGCACCGTGCTGCGCATCTTCAAGATGCCCGTCTTGGTGTTTTGGGGCCG
TTTCTTTACATGGCTGCCGTTCCGCGTTGACCTCGGCGTCGTTTTTGGGC
AGCCGGTCGAGGTGCCCATTGTCACCGACCCCACCGACGATCAG
back to top