mRNA_P-wetherbeei_contig858.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: D8LI12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI12_ECTSI) HSP 1 Score: 117 bits (293), Expect = 4.120e-30 Identity = 59/124 (47.58%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 106 EDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDALAAANPVQRRKWERLKA 477
++IR SPW LNLLA+ +RGL V EA A L++ KKKH T + I+N NLAD+R+ L ++L V +++VT+G+ +KR + MG+GRAG ++ HLN+TL E+DFD A P + R+ E+L A
Sbjct: 51 KEIRVSPWNLNLLAKLVRGLPVVEANAQLLFCKKKHTTTVAKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQLKAAPSRNRR-EKLMA 173
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: A0A6H5KPA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPA6_9PHAE) HSP 1 Score: 118 bits (295), Expect = 2.290e-29 Identity = 59/124 (47.58%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 106 EDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDALAAANPVQRRKWERLKA 477
++IR SPW LNLLA+ +RGL V EA A L++ KKKH T + I+N NLAD+R+ L ++L V +++VT+G+ +KR + MG+GRAG ++ HLN+TL E+DFD A P + R+ E+L A
Sbjct: 150 KEIRVSPWNLNLLAKLVRGLPVVEANAQLLFCKKKHTTTVAKAIQNALNLADMRYGLAAEELEVGEIFVTKGKMVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQIKAAPSRNRR-EKLMA 272
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: A0A6U3UCW5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3UCW5_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.290e-28 Identity = 60/138 (43.48%), Postives = 82/138 (59.42%), Query Frame = 1
Query: 85 KSVVAKKEDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDA--LAAANPVQRRKWERLKAEVRAD 492
KS + +++IR SPW++NL+ + GLTVPEA+ LM+ +K A ++I T NLADIR P QL VS+ + T G +KR K MG+GR+G RF H+ L L E+DF L A + Q+RKW A R D
Sbjct: 2 KSYIGNEKNIRHSPWRMNLVCQFAHGLTVPEALKQLMFCQKVKAPLVAKVIRRTANLADIRDGFQPSQLEVSECFTTHGTHLKRLKIMGRGRSGKKLRRFSHIRLVLREIDFPTKILEATSINQKRKWLERLAIARED 139
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: K8YXM3_NANGC (Ribosomal protein l22 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXM3_NANGC) HSP 1 Score: 108 bits (271), Expect = 2.040e-26 Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 64 PIAARGAKSVVAKKEDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYL-RLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDALAAA--NPVQRRKWERLKA 477
PI +R + VV++K IR SPW++NLL RQ+RGL V EA+ L +++K+ + ++I+N NLA+IRH L P+ L V++ +V + K +MGKGR G R+ H+ + L E+DF+ AA N QR +WE +A
Sbjct: 68 PIVSREMREVVSRKNRIRMSPWKINLLTRQVRGLPVVEALMQLKFSRKQKGPPLVAKVIQNAANLANIRHNLHPEDLMVAEAFVNRANIQKGIMFMGKGRFGLKLRRYSHVVVRLKEIDFEGSLAACKNRFQRARWETRRA 208
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: A0A7S2G9V8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9V8_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.650e-26 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 106 EDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDALA--AANPVQRRKWERLKAEV 483
++I SPW++NLLA+QLRGLTVPEA+ ++ KK A LIE ++A H + + L+V L+VTQG KR K MG+GR G ++R HL+LT+S +DF+ A N QRR+W+RL E
Sbjct: 117 KNISYSPWRMNLLAKQLRGLTVPEAIGQGKFSAKKGGAIAKSLIEKASDVALRNHGVARESLFVDTLFVTQGPGRKRIKMMGRGRTGLSFIRSSHLHLTISAIDFEKRVGEAPNGSQRRRWQRLAEEA 244
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: A0A7S3ZQB7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQB7_9STRA) HSP 1 Score: 107 bits (266), Expect = 7.230e-26 Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 100 KKEDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDALA--AANPVQRRKWERLKAEVRA 489
K E +R SP +LNL+A+ +R L VP+A+A L + K+ A T IE A +H L P++L + + +VT MKR K MG+GR+GT R GHLN+T++ +DF+A A NP QRRKWE +A RA
Sbjct: 45 KHERVRHSPRKLNLIAKLVRRLWVPDALAQLQFTPKRFAPTVAAAIERCAQRAAAQHELVPEELEIERCFVTPAPFMKRLKIMGRGRSGTIRKRSGHLNVTVAAVDFEAKIRDAHNPRQRRKWEERRAVARA 176
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: A0A7S2WS22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS22_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.410e-24 Identity = 57/138 (41.30%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 76 RGAKSVVAKKEDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFD--ALAAANPVQRRKWERLKAEV 483
R +SV + +I SP ++NL+A+ LR LTVPEA+A + KKK A LIE ++A++++ L DQL V +++VTQG+ K + MG+GR G ++R HLN+TL+E+DF+ AA+ Q+ KW++L+A
Sbjct: 61 RELRSVSQRFTNISYSPLRMNLVAKLLRRLTVPEALAQSTFTKKKGGAIAKDLIERCASVAEMKYGLSHDQLLVDKIFVTQGKGQKMVRTMGRGRTGIEFVRNSHLNVTLTEIDFEDRIRAASTRNQQTKWKKLEARA 198
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: A0A7S3YCU9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCU9_HETAK) HSP 1 Score: 94.4 bits (233), Expect = 5.370e-21 Identity = 50/125 (40.00%), Postives = 75/125 (60.00%), Query Frame = 1
Query: 112 IRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDA-LAAANPVQR---RKWERLK 474
IR SPW+LNL+A+Q+R LTV EA A +Y+KK A + + + R+ L P++L V++ + T G RMKR + MG+G G + +F HL + L E+DF A +A A R R+W +L+
Sbjct: 65 IRVSPWKLNLVAKQVRNLTVQEAYAQTLYSKKHQARNVYKTLAKAATEMEERYGLLPEELMVAEAFATMGTRMKRVRIMGRGYHGVEHRKFAHLTVRLREIDFPARIAEAEGQSRFRARRWRKLE 189
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: A0A1V9ZLD6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLD6_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 6.560e-21 Identity = 53/144 (36.81%), Postives = 84/144 (58.33%), Query Frame = 1
Query: 58 SLPIAARGAKSVVAKKEDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDALAAANPVQRRKWERLKAEVRA 489
SL A ++V K++IR SP +L+LLA+Q+RGL V EA+ + ++ K+ AA + ++N NLADI + + P L V++ +V +G +KR K MG+GRAG + HL + L E + AA P+ + K +L +A
Sbjct: 38 SLEDATEHFRTVRTMKKEIRVSPRKLSLLAQQIRGLPVEEALTQMTFSPKRKAAIVKKTVQNAINLADINYGIEPTNLKVAEAFVNKGLFLKRLKIMGRGRAGIKHRPHSHLTIVLKEFE----PAAVPISKTKARKLAQRAQA 177
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Match: A0A024G8V2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8V2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.370e-20 Identity = 45/124 (36.29%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 85 KSVVAKKEDIRASPWQLNLLARQLRGLTVPEAVANLMYAKKKHAATYLRLIENTCNLADIRHRLPPDQLWVSQLYVTQGRRMKRWKYMGKGRAGTGYLRFGHLNLTLSEMDFDALAAANPVQRR 456
++V K+DIR SP +L LA+Q+RGL EA+ + +++K+ A ++N NLADIR+ + P+ L +S+ +VT+G+ +KR + MG+GR+G + F HL + L E + + + QR+
Sbjct: 62 RTVKTIKKDIRVSPRKLTYLAQQVRGLPAEEALLQMKFSRKRRATIVKATVQNAVNLADIRYNIEPENLKISEAFVTKGKYLKRLRIMGRGRSGIMHHPFSHLVIVLKEFEPEPKQRSRIAQRK 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig858.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig858.2.1 >prot_P-wetherbeei_contig858.2.1 ID=prot_P-wetherbeei_contig858.2.1|Name=mRNA_P-wetherbeei_contig858.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp NSSPTPSTAPKSAVQASQSSLPIAARGAKSVVAKKEDIRASPWQLNLLARback to top mRNA from alignment at P-wetherbeei_contig858:2114..2797+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig858.2.1 ID=mRNA_P-wetherbeei_contig858.2.1|Name=mRNA_P-wetherbeei_contig858.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig858:2114..2797+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig858:2114..2797+ >mRNA_P-wetherbeei_contig858.2.1 ID=mRNA_P-wetherbeei_contig858.2.1|Name=mRNA_P-wetherbeei_contig858.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig858:2114..2797+ (Phaeothamnion wetherbeei SAG_119_79)back to top |