mRNA_P-wetherbeei_contig8540.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8540.3.1
Unique NamemRNA_P-wetherbeei_contig8540.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A536S332_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536S332_9PROT)

HSP 1 Score: 411 bits (1056), Expect = 4.830e-141
Identity = 207/300 (69.00%), Postives = 251/300 (83.67%), Query Frame = 1
Query:   73 QAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            QA+P++ +R++VPF+ GG+ D SAR VADRLGARLGQ VVVENRPGA+GNIG E VA+S PDG+TL+LG+DGT+V+NPHV++K  FD LRDFAPVTKLGDA +I+VAHPSVPA  L+ELIA AKAKP  F +G++GTG + HLA EML+Q TGA L HVPYKGGGQAI D +GGQIPL  TAVA + QF+KSG+LK +G+SSA R+   P+VPTF ESGLPGFVVDSWVG+LAPA TP+ ++ERLQ EIAAVL  P VKERY VLGI+PVGN P+++AAQIR DLARW  VV+QA I++E
Sbjct:   44 QAFPSRPLRLVVPFAAGGVTDTSARAVADRLGARLGQPVVVENRPGASGNIGTEQVAKSPPDGHTLVLGFDGTMVINPHVFAKIPFDTLRDFAPVTKLGDATLILVAHPSVPANSLQELIAQAKAKP--FAFGTSGTGGTPHLAGEMLAQRTGAQLTHVPYKGGGQAIIDVIGGQIPLVYTAVASSQQFVKSGKLKAMGVSSARRSPSLPNVPTFEESGLPGFVVDSWVGVLAPARTPQPVIERLQREIAAVLADPIVKERYGVLGIEPVGNTPEQFAAQIREDLARWEKVVRQAGIKLE 341          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A537CC13_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CC13_9PROT)

HSP 1 Score: 410 bits (1054), Expect = 5.760e-141
Identity = 202/307 (65.80%), Postives = 253/307 (82.41%), Query Frame = 1
Query:   52 VQAVAFAQAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            + A A +Q +PAK +RI+VPFSPGG+ADNSARVVAD LGARLGQ V+VENRPGA+GNIG +AVA++APDGYTLLLG+DGT+V+NPHV+ K  FD L+DFAPVTKLGDA +I+VAHPSVPA++L E IA A+A+PG+F YG++GTG + HLA E+L   TG  L HVPYKGGGQAI D VGGQIPL  TA+A A Q++++GRL  LG+  A R+A  PDVPTF+ESGLPGF V SW GI APA+TPR ++++LQ E+AAVL+   V+ERY+VLGI+PVGN P E++ Q+RADLARW  VV+ AN+R+E
Sbjct:   20 IPAQAHSQDYPAKPIRIVVPFSPGGVADNSARVVADPLGARLGQQVLVENRPGASGNIGTQAVAQAAPDGYTLLLGFDGTMVINPHVFPKLPFDTLKDFAPVTKLGDATLILVAHPSVPARNLAEFIAHARARPGSFAYGTSGTGGTPHLAGELLKLRTGIALEHVPYKGGGQAITDVVGGQIPLVFTAIATAQQYVRAGRLVALGVPGARRSAALPDVPTFVESGLPGFDVSSWTGIFAPASTPRLVIDKLQGELAAVLRTAFVRERYAVLGIEPVGNSPQEFSDQVRADLARWEKVVRAANVRVE 326          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A1P8FLD6_9PROT (LacI family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium GR16-43 TaxID=1904640 RepID=A0A1P8FLD6_9PROT)

HSP 1 Score: 406 bits (1044), Expect = 1.600e-139
Identity = 199/310 (64.19%), Postives = 250/310 (80.65%), Query Frame = 1
Query:   43 LACVQAVAFAQAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            LA + + AFAQ WP + +R+IVPF+PGG+ D SAR VA+ L  RLGQ VVVEN+PGA+GNIG E VAR+APDGYTL+LG+DGT+V+NPHV+ +  FD LRDF PV+KLGDAG+++VA+PS+  K L EL+ALAK KPG + YG++GTG + HLA E+L Q TG  L H+PYKGGGQA+ D +GGQIPL  TA+A A Q +K+G+L GLG+ SA R++  PDVPTFIESG+PGF   SWVGI APA TPRAIV++LQ EIAA LQ P V+ERY+VLGIDPVGN P+++ AQI+ADLARWG VV+ ANIR++
Sbjct:   12 LAFLASSAFAQDWPTRPIRLIVPFAPGGVTDTSARAVAEALSQRLGQQVVVENKPGASGNIGTEQVARAAPDGYTLVLGFDGTMVINPHVFKEMPFDTLRDFVPVSKLGDAGLLLVANPSLNVKSLAELLALAKTKPGPYPYGTSGTGGTPHLAGELLKQRTGLDLQHIPYKGGGQAVTDVLGGQIPLVFTAIASAQQHVKAGKLIGLGVPSALRSSSLPDVPTFIESGIPGFEAVSWVGIFAPAKTPRAIVDKLQREIAAALQTPAVRERYAVLGIDPVGNTPEQFTAQIKADLARWGEVVRAANIRVD 321          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A6M4GY78_9PROT (Uncharacterized protein n=1 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GY78_9PROT)

HSP 1 Score: 394 bits (1013), Expect = 8.210e-135
Identity = 192/303 (63.37%), Postives = 239/303 (78.88%), Query Frame = 1
Query:   64 AFAQAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            AFAQ WP K +R+IVPF+P G+AD SAR +A+ L  RLGQ VVVEN+PGA+GNIG + VARSAPDGYTL+LG+DGT+V+NPHV+    FD LRDFA VTKLGDAG+++VAHPS+  K L E + LAK KPG + YG++GTG + HLA E+L Q TG  L H+PYKGGGQA+ D +GGQIPL  TA+A A Q +KSG++ GLG+ SA R++  PDVPTFIE+GL GF   SWVGI APA TP+AIV++LQ EIAA LQ P V++RY+VLGIDPVGN P+++  Q++ DLARWG VVK A I+IE
Sbjct:   19 AFAQDWPTKPIRLIVPFAPSGVADTSARTIAEALSQRLGQPVVVENKPGASGNIGTDQVARSAPDGYTLVLGFDGTMVINPHVFKDMPFDTLRDFAAVTKLGDAGLLLVAHPSLGVKSLAEFLTLAKTKPGPYPYGTSGTGGTPHLAGELLKQRTGVALEHIPYKGGGQAMTDVLGGQIPLVFTAIASAQQHVKSGKVIGLGVPSAKRSSSLPDVPTFIEAGLDGFEAVSWVGIFAPAKTPKAIVDKLQREIAAALQTPAVRDRYAVLGIDPVGNTPEQFTEQVKKDLARWGEVVKSAGIKIE 321          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A536Y9A6_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y9A6_9PROT)

HSP 1 Score: 397 bits (1020), Expect = 6.200e-132
Identity = 201/287 (70.03%), Postives = 241/287 (83.97%), Query Frame = 1
Query:   73 QAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLAR 933
            QA+P++ VR++VPF+ GG+ D SAR V+DRLGARLGQ VVVENRPGA+GNIG E VARSAPDG+TL+LG+DGT+V+NPHV++K  FD LRDFAPVTKLGDA +I+VAHPSVPA  L+ELIA A+ +P  F +G++GTG + HLA EML+Q TGA L HVPYKGGGQAI D VGGQIPL  TAVA + QF+KSG+LK +G+SSA R++  PDVPTF ESGLPGFVVDSWVG+LAPA TP  ++ERLQ EIAAVL  P VKERY VLGI+PVGN P+++AAQIR DLAR
Sbjct:   30 QAFPSRPVRLVVPFAAGGVTDTSARAVSDRLGARLGQPVVVENRPGASGNIGTEQVARSAPDGHTLVLGFDGTMVINPHVFAKIPFDTLRDFAPVTKLGDATLILVAHPSVPANSLQELIAQARTRP--FAFGTSGTGGTPHLAGEMLAQRTGAQLTHVPYKGGGQAIIDVVGGQIPLVFTAVASSQQFVKSGKLKAIGVSSARRSSSLPDVPTFAESGLPGFVVDSWVGVLAPAKTPLPVIERLQREIAAVLADPVVKERYGVLGIEPVGNTPEQFAAQIREDLAR 314          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A536ZW84_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZW84_9PROT)

HSP 1 Score: 387 bits (993), Expect = 7.800e-132
Identity = 200/319 (62.70%), Postives = 249/319 (78.06%), Query Frame = 1
Query:   19 LRIAIGCVLACVQ-AVAFAQAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            +RIA+   L  +  + A AQ WP K VRIIVPF+PGG+ADNSARVVA+ L ARLGQ V+VENRPGA+GNIG +AVA++  DG+TLLLG+DGT+V+NPHV++K  FD LRDFAPVTKLGDA +I+VAHP    ++L ELI  AKAKP  F+YG++GTG + HLA E+L Q TGA L HVPYKGGGQAI D VGGQIPL  TA+A A Q++++ RL GLG+ SA R++  PDVPTF ESGL GF V SWVGI APA TP+ +V++LQ E+ A L+ P V+ERY+ LGI+PVGN P E+  Q+RADLARW  VVK AN+++E
Sbjct:    1 MRIALAVFLGLILISAAGAQEWPTKPVRIIVPFTPGGVADNSARVVAEPLAARLGQQVIVENRPGASGNIGTQAVAQADADGHTLLLGFDGTMVINPHVFAKIPFDTLRDFAPVTKLGDATLILVAHPGAGVRNLSELIERAKAKP--FSYGTSGTGGTPHLAGELLKQRTGAQLEHVPYKGGGQAITDVVGGQIPLVFTAIATAQQYVRTNRLVGLGVPSAKRSSALPDVPTFHESGLAGFDVSSWVGIFAPAKTPQPVVDKLQRELQAALRTPFVRERYATLGIEPVGNAPREFLEQVRADLARWAEVVKAANVKVE 317          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A536SX08_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SX08_9PROT)

HSP 1 Score: 383 bits (983), Expect = 1.700e-130
Identity = 197/301 (65.45%), Postives = 235/301 (78.07%), Query Frame = 1
Query:   70 AQAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            AQ WP K VRIIVPF+PGG+ADNSARVVA+ L ARLGQ VVVEN+PGA+GNIG +AVA + PDGYTLLLG+DGT+V+NPHV++K  FD L DFAPVTKLGDA +I+VAHPS+P K+L +LI LA+ +     YG++GTG + HLA E+L Q TGA L HVPYKGGGQAI D VGGQIPL  TA+A A Q++++GRL+ LG+  A R+   PDVPTF ESG+  F V SWVGI APA TP AIVERLQ E+A VL+ P VKERY VLGI+PVGN   E+  Q+R DL RW  VVK ANIR+E
Sbjct:    7 AQDWPRKAVRIIVPFAPGGVADNSARVVAEPLAARLGQPVVVENKPGASGNIGTQAVAEAPPDGYTLLLGFDGTMVINPHVFAKVPFDTLYDFAPVTKLGDATLILVAHPSLPVKNLADLIDLARTR--ALAYGTSGTGGTPHLAAELLKQRTGAKLEHVPYKGGGQAITDVVGGQIPLVFTAIATAQQYVRTGRLRALGVPGAKRSPALPDVPTFEESGVVPFDVTSWVGIFAPAKTPAAIVERLQKELALVLRTPFVKERYGVLGIEPVGNSSREFFEQVREDLGRWEKVVKAANIRVE 305          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A7H0GHV8_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Diaphorobacter TaxID=238749 RepID=A0A7H0GHV8_9BURK)

HSP 1 Score: 375 bits (962), Expect = 5.820e-127
Identity = 183/303 (60.40%), Postives = 237/303 (78.22%), Query Frame = 1
Query:   64 AFAQAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            A+A  +P+K +R+IVPF+PGG+ D  ARVVA++LG RLGQ VVV+N+PGA+GNIG +  A +APDGYTL++G+DGT+V+NPHVY K  FD L+DFAPV+K+GDA +I+V HPSVPAKDL  LIA +K+ P   +YGSAGTGS+ HLA E+L   TGA  +HVPYKGGGQA+AD VGG +P+  TAVAGA  F+K G++  + +SSA R    PDVPT  ESG+PGFVV+SW+GILAPA TP+AIV+RLQ E+  V+ +PE+KER + LGI+  GN P E+ A+I ADL ++  VVK ANIR+E
Sbjct:   26 AWADTYPSKPIRLIVPFAPGGVTDTGARVVAEKLGERLGQQVVVDNKPGASGNIGTQQAATAAPDGYTLVVGFDGTMVINPHVYKKVPFDTLKDFAPVSKIGDAALIIVTHPSVPAKDLPSLIAYSKSTPAGVSYGSAGTGSTPHLAGELLKAKTGANFVHVPYKGGGQAMADVVGGTLPMLYTAVAGAYPFVKRGQINAIAISSAKRLPSLPDVPTVAESGVPGFVVNSWIGILAPAKTPQAIVDRLQKELNHVVHLPEIKERLASLGIESSGNTPAEFRAEIEADLKKYADVVKTANIRME 328          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: A0A1I5SI47_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1I5SI47_9BURK)

HSP 1 Score: 374 bits (959), Expect = 1.660e-126
Identity = 182/300 (60.67%), Postives = 235/300 (78.33%), Query Frame = 1
Query:   73 QAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            Q +P K +R+IVPF+PGG+ D  ARVVAD+LGARLGQ+VVV+NRPGA+GNIG + VA +APDGYTLLLG+DGT+V+NPHVY+K  FD L+DF PV+K+GDA +I+V HPSVPAK L EL+A +K  PG  +YGSAGTGS+ HLA E+L   TGA  +HVPYKGGGQ++ D VGG +P+  TAVAGA  F++ G+++ + +SSA R A  P+VPT  ESG+PGF   SW+GILAPA TP+ IVERLQ E+ AV+Q PEV+ER + LGI  +GN P E+  QIRADLA++  +VK A +R++
Sbjct:   29 QDYPNKPIRLIVPFTPGGVTDTGARVVADKLGARLGQSVVVDNRPGASGNIGTQMVATAAPDGYTLLLGFDGTLVINPHVYAKVPFDTLKDFVPVSKIGDAVLIIVVHPSVPAKTLSELVAYSKTNPGGVSYGSAGTGSTPHLAGELLKARTGANFVHVPYKGGGQSMTDLVGGSLPMLYTAVAGAYPFVQKGQIRPIAVSSAQRLASLPEVPTVAESGVPGFESSSWIGILAPAKTPQPIVERLQRELHAVVQSPEVRERLASLGISALGNTPAEFGQQIRADLAKYDQIVKAAKVRVD 328          
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Match: UPI001C93B645 (tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Cupriavidus respiraculi TaxID=195930 RepID=UPI001C93B645)

HSP 1 Score: 371 bits (953), Expect = 1.310e-125
Identity = 177/303 (58.42%), Postives = 239/303 (78.88%), Query Frame = 1
Query:   64 AFAQAWPAKTVRIIVPFSPGGIADNSARVVADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVVNPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAKPGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQIPLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVDSWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDEYAAQIRADLARWGPVVKQANIRIE 972
            A AQA+P+K +R+IVPF+PGG++D SARVVAD+LG RLGQ VVVEN+PGA+GNIG   VA++APDGYTL+LG+DGT+V+NPHVY+K  FD ++DF P+ K+GDA +I++AHPSVPAK+L+EL+A ++++ G  +YGSAGTGS+ HLA E+L   TG  ++HVPYKGGGQA+ D VGG +PL  TAVAGA Q++K G+   + +S A+R    PDVPT  ESG+PG V +SWVG+LAPANTP+ IV++L  E+ AV+ +P+ +ER + LGI PVGN  + +  QI+ADL ++  VVK A IR+E
Sbjct:   25 AMAQAYPSKPIRLIVPFAPGGVSDTSARVVADKLGQRLGQQVVVENKPGASGNIGTAMVAQAAPDGYTLVLGFDGTMVINPHVYAKVPFDPIKDFVPIGKIGDAALILIAHPSVPAKNLQELVAYSRSREGGLSYGSAGTGSTPHLAGELLKARTGLNMVHVPYKGGGQAMGDLVGGTLPLLYTAVAGAQQYVKGGKATAIAVSGASRVPALPDVPTIAESGVPGLVSESWVGLLAPANTPKEIVDKLSGELNAVVNLPDTRERLATLGIVPVGNSSEAFGKQIQADLKKYSEVVKTAKIRVE 327          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8540.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536S332_9PROT4.830e-14169.00Tripartite tricarboxylate transporter substrate bi... [more]
A0A537CC13_9PROT5.760e-14165.80Tripartite tricarboxylate transporter substrate bi... [more]
A0A1P8FLD6_9PROT1.600e-13964.19LacI family transcriptional regulator n=1 Tax=Beta... [more]
A0A6M4GY78_9PROT8.210e-13563.37Uncharacterized protein n=1 Tax=Usitatibacter rugo... [more]
A0A536Y9A6_9PROT6.200e-13270.03Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A536ZW84_9PROT7.800e-13262.70Tripartite tricarboxylate transporter substrate bi... [more]
A0A536SX08_9PROT1.700e-13065.45Tripartite tricarboxylate transporter substrate bi... [more]
A0A7H0GHV8_9BURK5.820e-12760.40Tripartite tricarboxylate transporter substrate bi... [more]
A0A1I5SI47_9BURK1.660e-12660.67Tripartite-type tricarboxylate transporter, recept... [more]
UPI001C93B6451.310e-12558.42tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8540contigP-wetherbeei_contig8540:1726..2700 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog257310.BB3123
PFAMsTctC
Model size975
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.57e-117
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VJBE@28216|Betaproteobacteria
Descriptionprotein conserved in bacteria
Cds size975
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187045.9333944-CDS-P-wetherbeei_contig8540:1725..27001683187045.9333944-CDS-P-wetherbeei_contig8540:1725..2700Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8540 1726..2700 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8540.3.1prot_P-wetherbeei_contig8540.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8540 1726..2700 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8540.3.1

>prot_P-wetherbeei_contig8540.3.1 ID=prot_P-wetherbeei_contig8540.3.1|Name=mRNA_P-wetherbeei_contig8540.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=325bp
MNTSVGLRIAIGCVLACVQAVAFAQAWPAKTVRIIVPFSPGGIADNSARV
VADRLGARLGQTVVVENRPGAAGNIGAEAVARSAPDGYTLLLGYDGTIVV
NPHVYSKTGFDVLRDFAPVTKLGDAGVIVVAHPSVPAKDLRELIALAKAK
PGTFTYGSAGTGSSAHLACEMLSQLTGAGLIHVPYKGGGQAIADAVGGQI
PLACTAVAGANQFMKSGRLKGLGLSSATRAAGAPDVPTFIESGLPGFVVD
SWVGILAPANTPRAIVERLQAEIAAVLQMPEVKERYSVLGIDPVGNKPDE
YAAQIRADLARWGPVVKQANIRIE*
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mRNA from alignment at P-wetherbeei_contig8540:1726..2700+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8540.3.1 ID=mRNA_P-wetherbeei_contig8540.3.1|Name=mRNA_P-wetherbeei_contig8540.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig8540:1726..2700+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATACAAGCGTCGGATTGCGCATAGCAATCGGTTGCGTGCTGGCCTG CGTGCAGGCCGTGGCTTTCGCGCAGGCCTGGCCTGCCAAGACCGTCCGCA TCATCGTGCCGTTCTCGCCGGGCGGCATCGCGGACAACAGCGCGCGCGTC GTCGCGGACCGCCTCGGTGCGCGACTCGGCCAGACGGTCGTGGTCGAGAA CCGTCCCGGCGCCGCCGGCAACATCGGCGCCGAGGCGGTGGCCAGGAGCG CGCCGGACGGATACACGCTGCTGCTCGGCTACGACGGGACCATCGTCGTC AACCCGCACGTGTACTCGAAGACCGGATTCGACGTGCTGCGCGATTTCGC GCCGGTCACCAAGCTCGGCGACGCGGGCGTGATCGTGGTCGCGCACCCTT CGGTGCCGGCGAAGGACCTGCGCGAACTGATCGCGCTGGCGAAAGCCAAG CCCGGCACCTTCACCTACGGGTCCGCAGGCACCGGCAGCAGCGCGCACCT CGCTTGCGAGATGCTCAGCCAGCTCACCGGTGCGGGCCTGATCCACGTGC CTTACAAGGGCGGCGGGCAAGCAATCGCCGACGCGGTGGGCGGCCAGATC CCTCTCGCCTGTACCGCGGTGGCGGGCGCGAACCAGTTCATGAAGTCGGG TCGCCTGAAGGGCCTGGGCCTGTCCAGCGCGACGCGCGCCGCCGGCGCCC CGGACGTGCCGACCTTCATCGAAAGCGGCCTGCCGGGCTTCGTCGTCGAC TCCTGGGTCGGGATCCTCGCGCCGGCGAACACGCCGCGCGCCATCGTCGA GCGCCTGCAAGCCGAAATCGCGGCCGTACTGCAGATGCCCGAGGTGAAGG AACGCTACTCGGTGCTCGGCATCGACCCAGTGGGCAACAAGCCCGACGAG TACGCCGCGCAGATCCGCGCCGACCTCGCGCGCTGGGGCCCGGTCGTGAA GCAGGCCAATATCCGGATCGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8540:1726..2700+

>mRNA_P-wetherbeei_contig8540.3.1 ID=mRNA_P-wetherbeei_contig8540.3.1|Name=mRNA_P-wetherbeei_contig8540.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig8540:1726..2700+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATACAAGCGTCGGATTGCGCATAGCAATCGGTTGCGTGCTGGCCTG
CGTGCAGGCCGTGGCTTTCGCGCAGGCCTGGCCTGCCAAGACCGTCCGCA
TCATCGTGCCGTTCTCGCCGGGCGGCATCGCGGACAACAGCGCGCGCGTC
GTCGCGGACCGCCTCGGTGCGCGACTCGGCCAGACGGTCGTGGTCGAGAA
CCGTCCCGGCGCCGCCGGCAACATCGGCGCCGAGGCGGTGGCCAGGAGCG
CGCCGGACGGATACACGCTGCTGCTCGGCTACGACGGGACCATCGTCGTC
AACCCGCACGTGTACTCGAAGACCGGATTCGACGTGCTGCGCGATTTCGC
GCCGGTCACCAAGCTCGGCGACGCGGGCGTGATCGTGGTCGCGCACCCTT
CGGTGCCGGCGAAGGACCTGCGCGAACTGATCGCGCTGGCGAAAGCCAAG
CCCGGCACCTTCACCTACGGGTCCGCAGGCACCGGCAGCAGCGCGCACCT
CGCTTGCGAGATGCTCAGCCAGCTCACCGGTGCGGGCCTGATCCACGTGC
CTTACAAGGGCGGCGGGCAAGCAATCGCCGACGCGGTGGGCGGCCAGATC
CCTCTCGCCTGTACCGCGGTGGCGGGCGCGAACCAGTTCATGAAGTCGGG
TCGCCTGAAGGGCCTGGGCCTGTCCAGCGCGACGCGCGCCGCCGGCGCCC
CGGACGTGCCGACCTTCATCGAAAGCGGCCTGCCGGGCTTCGTCGTCGAC
TCCTGGGTCGGGATCCTCGCGCCGGCGAACACGCCGCGCGCCATCGTCGA
GCGCCTGCAAGCCGAAATCGCGGCCGTACTGCAGATGCCCGAGGTGAAGG
AACGCTACTCGGTGCTCGGCATCGACCCAGTGGGCAACAAGCCCGACGAG
TACGCCGCGCAGATCCGCGCCGACCTCGCGCGCTGGGGCCCGGTCGTGAA
GCAGGCCAATATCCGGATCGAGTAG
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