mRNA_P-wetherbeei_contig8513.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: D7FZQ1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ1_ECTSI) HSP 1 Score: 313 bits (801), Expect = 2.910e-98 Identity = 162/253 (64.03%), Postives = 196/253 (77.47%), Query Frame = 2
Query: 131 QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLL-EDGDYPKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGRVERTLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQ 886
+ +V++DEVDTML QGF DI+KL P+L + R++ QFIFVTATLTKAVR+LL EDGDY KVR VETRDVH LPS++H M+D KGRDK+++L+D+ Q+ +RTLVFCNTVKSC+A E +RE + YHGEVPS +R+ NL RFK G+ ++LV TDIA+RGLDMP+V HV+ FDFPLNPIDYLHRSGRTARMGA +GRVTSLLAKRD VLA AIE+AV SG LDELSSRR DY G+
Sbjct: 173 KANYVVVDEVDTMLTQGFAADIEKLNRPLLANPNRRDMAQFIFVTATLTKAVRKLLGEDGDYSKVRQVETRDVHHTLPSLRHVMIDIKGRDKMSALIDIAQQHLKDFKRTLVFCNTVKSCRAAEFGLREVDVKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGA------KGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGK 419
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A6H5KY63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY63_9PHAE) HSP 1 Score: 317 bits (811), Expect = 4.210e-98 Identity = 164/253 (64.82%), Postives = 197/253 (77.87%), Query Frame = 2
Query: 131 QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLL-EDGDYPKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGRVERTLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQ 886
+ +VI+DEVDTML QGF DI+KL P+L + R+++ QFIFVTATLTKAVR+LL EDGDYPKVR VET DVH LPS++H M+D KGRDK+++L+D+ Q+ +RTLVFCNTVKSC+A E +RE L YHGEVPS +R+ NL RFK G+ ++LV TDIA+RGLDMP+V HV+ FDFPLNPIDYLHRSGRTARMGA +GRVTSLLAKRD VLA AIE+AV SG LDELSSRR DY G+
Sbjct: 290 KANYVIVDEVDTMLTQGFAADIEKLSRPLLANPNRRDTAQFIFVTATLTKAVRKLLGEDGDYPKVRQVETSDVHHTLPSLRHVMIDIKGRDKMSALIDIAQQHYKDFKRTLVFCNTVKSCRAAEFGLREVDLKALSYHGEVPSDERSSNLERFKAGQAKYLVCTDIASRGLDMPDVDHVVMFDFPLNPIDYLHRSGRTARMGA------KGRVTSLLAKRDLVLAAAIEQAVQSGLPLDELSSRRTDYATGGK 536
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA) HSP 1 Score: 310 bits (794), Expect = 5.450e-97 Identity = 167/263 (63.50%), Postives = 201/263 (76.43%), Query Frame = 2
Query: 131 QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLLEDGDYPKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGR--------VERTLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQRLA 895
QVTHV+IDEVDTML QGFGPDI LV P++ + +++VQF+ V+AT+T A+R+LLE G++PKVR VETRDVH+ LP+MKHAMVD KGRDKL+ LL+VL Q+ G RTL+FCNTV S +AV+HA+R+AG+ YHGEVPS RA L F+ G LVATD+AARGLD+P V HVI FDFPLNP+DYLHRSGRTARMGA +GRVTSLLAKRDRVLA AIE AVL+G LD L++RR DYL PG +LA
Sbjct: 171 QVTHVVIDEVDTMLTQGFGPDITALVKPLMRR-QGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPNMKHAMVDCKGRDKLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQRAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGA------RGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRTDYL-PGGKLA 425
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A7S2WDP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDP9_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.230e-88 Identity = 148/255 (58.04%), Postives = 192/255 (75.29%), Query Frame = 2
Query: 131 QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLLEDGDYPKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGRVERTLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQRLA 895
QVTHVIIDEVDTML+QGFGPDIK+L+GP+L S +RK+ VQFI TAT+T+AV++LL++G P +R +ET D+H+ +P+ H MV+ +GRDK+ LL+V+ R E+TLVFCNTV SC+AVEHA+R+AG YHGE+ S R E+L FK +V LV TD+A+RGLDMP+VA V+ FDFP NPIDYLHRSGRTAR G +G + SL+AKRD L+TAIE+A+ G LD+L++ R DY +PG RLA
Sbjct: 230 QVTHVIIDEVDTMLVQGFGPDIKELLGPILFSPQRKSEVQFILATATMTQAVKRLLDEGGLPPMRILETSDLHQAVPTAMHRMVNAQGRDKIQLLLEVIRDTNLRNEQTLVFCNTVLSCRAVEHALRDAGCSSLGYHGEMNSAARLESLEAFKAADVPTLVCTDLASRGLDMPSVARVVMFDFPPNPIDYLHRSGRTARFGQ------RGEIVSLVAKRDLPLSTAIERAIAKGEPLDQLTNNRRDY-QPGGRLA 477
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A7S3XYE8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYE8_HETAK) HSP 1 Score: 285 bits (728), Expect = 1.480e-88 Identity = 157/257 (61.09%), Postives = 193/257 (75.10%), Query Frame = 2
Query: 131 QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLLEDGDY--PKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGRVERTLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQRLA 895
+VTHV+IDE+DTMLMQGFGP+IKKL+ + ++ QF+ TATLTKAVR+ LE+ +Y R VE DVH+ LP+++HAMVDTKGRDK+ LLDVL Q+ R + T+VFCNTVKS Q ++H++ EAGL YHGEV +R ENL RFK GEVR LVATDIAARGLD+P+V HV+ FDFPLNP+DYLHRSGRTARMGA+ G VTS+LAKRDRVLA AIE AV G LD L++ + DY E G++LA
Sbjct: 85 RVTHVVIDEMDTMLMQGFGPEIKKLIQTL-----DRDRCQFLLCTATLTKAVRRFLEEENYIPGPPRVVEASDVHRSLPNLRHAMVDTKGRDKVTVLLDVLFQH--REKTTIVFCNTVKSAQMLDHSLAEAGLRALCYHGEVRGDERRENLARFKRGEVRFLVATDIAARGLDVPDVEHVVMFDFPLNPVDYLHRSGRTARMGAS------GMVTSVLAKRDRVLAGAIEAAVRKGLPLDTLTASKRDYQE-GKKLA 327
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A4D9D2M2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2M2_9STRA) HSP 1 Score: 281 bits (718), Expect = 2.240e-84 Identity = 144/256 (56.25%), Postives = 193/256 (75.39%), Query Frame = 2
Query: 131 QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLL-EDGDYPKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGRVERTLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQRLA 895
QVTHV++DE+DTML GFGPD+K+L+ P L + ++ VQ++ TATLT AV++L+ E+G++PK R +++ D HK LP+M+H M+DTKG DK+ LLDV+ Q + ER ++FCNTV+SC+A EHA+RE L YHG++ S +RA L++FK GEV LV TDIA+RGLDMP V HV+ FDFPLNPI+YLHRSGRTARMGA +G+VTSLL KRD+VLA+A++ AV G LD LS+R+ DY E G +L+
Sbjct: 280 QVTHVVVDEMDTMLKDGFGPDLKRLMVP-LEAKSKREKVQYLMATATLTPAVKRLMAEEGNFPKTRFLQSEDAHKSLPTMRHIMLDTKGGDKVQLLLDVVSQGRQNGERAMIFCNTVQSCRAAEHALRELALPSACYHGDMRSEERAAALQKFKSGEVSFLVCTDIASRGLDMPFVEHVVMFDFPLNPIEYLHRSGRTARMGA------KGKVTSLLTKRDKVLASAVQTAVAKGLPLDSLSARKRDY-ESGGKLS 527
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A7S2FKV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKV5_9STRA) HSP 1 Score: 261 bits (668), Expect = 6.250e-78 Identity = 147/281 (52.31%), Postives = 190/281 (67.62%), Query Frame = 2
Query: 131 QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLLEDGDYPKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGRVER-TLVFCNTVKSCQAVEHAVRE-------------------------AGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQRLA 895
QVTHV+IDEVDTMLMQGFGPD++KL+ P+L S ER+ +VQFI VTAT+TKAVR+LLEDGD P++RT+E D+H+ LP+ H M++ G+DK+ L D++ +G+ ++ TL+FCNTV SC+AV HA+RE A R YHGE+PS +R E L FK G+ LV TD+A RGLD+ +VA VINFDFP NPIDYLHR+GRTAR G +G + SL+ KRD LATAIE+AV G LD L++ + DY PG RL+
Sbjct: 189 QVTHVVIDEVDTMLMQGFGPDLQKLLKPILLSPERRENVQFIVVTATMTKAVRRLLEDGDLPQMRTLEADDLHQALPNALHRMLNAAGQDKIEVLKDLV---RGKHQKPTLIFCNTVASCRAVTHALREETNNNFGDMDYDSDDAEGXXXXXXXASSPVRSYHGEMPSNERVEALGDFKAGDASILVCTDLAQRGLDIQDVAKVINFDFPRNPIDYLHRAGRTARAGR------KGEILSLVLKRDLPLATAIERAVARGEPLDGLTNDKRDYA-PGGRLS 459
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A0G4F3L1_VITBC (Uncharacterized protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3L1_VITBC) HSP 1 Score: 249 bits (637), Expect = 3.110e-69 Identity = 137/270 (50.74%), Postives = 181/270 (67.04%), Query Frame = 2
Query: 131 QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLLEDGDYPKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVL--------------HQNQGRVER--TLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQRL 892
+V++V+IDEVDTMLMQGFGPDI KL+ P++ + + Q +F TATLTKAVR+LL+ D P VR VE +HK LP++++ M+DTKG DKL +L ++L + G V R TLVFCNTV SC+A +HA++EAG YHGEVP R NL F+ G+V +LV TD+AARGLD+ V V+ FDFPLNPID++HR+GRT R G+ +G V LL +RDRVLAT +++A+ G L +LSS R+DY E G RL
Sbjct: 996 EVSYVVIDEVDTMLMQGFGPDINKLLQPLITRPDTEQP-QLVFATATLTKAVRRLLDQEDLPAVRYVEAPGLHKSLPNVRYEMIDTKGEDKLDALRELLKVRGPQRPAEGGDGQRGAGEVYRKSTLVFCNTVNSCRACQHAIQEAGFTSLAYHGEVPQEQRKANLEAFRHGQVPYLVCTDLAARGLDIAQVDQVVMFDFPLNPIDFIHRAGRTGRAGS------KGSVLCLLQRRDRVLATGVQRAIRLGRPLSDLSSSRKDY-EKGGRL 1257
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A6U1QKZ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QKZ5_9STRA) HSP 1 Score: 221 bits (562), Expect = 5.850e-66 Identity = 117/199 (58.79%), Postives = 147/199 (73.87%), Query Frame = 2
Query: 329 VETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGRVERTLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQRLAMPQRPRRALA 925
VETRD+H+ LP++KH MVD KG DK+ LLDVL+Q++G+ + +VFCNTV SC+A EHAVREAGL + YHGE+ SI R EN+ FK + LV TD+A+RGLDMP V HV+ FDFPLNPID+LHRSGRTARMG G VTS+L K DRVLATAIE+A+L+ LD+LSSR++DY + G+ M + RR A
Sbjct: 1 VETRDLHRTLPNLKHVMVDCKGSDKITVLLDVLYQHKGK--QAIVFCNTVASCRAAEHAVREAGLTAQGYHGEINSIQRRENIDAFKNNKFNLLVCTDLASRGLDMPTVDHVVMFDFPLNPIDFLHRSGRTARMGR------HGLVTSILTKGDRVLATAIERAILTNMPLDQLSSRKQDYGDRGKLHHMTKVGRRKAA 191
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Match: A0A7S4LLS1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLS1_9EUGL) HSP 1 Score: 214 bits (545), Expect = 5.840e-60 Identity = 122/282 (43.26%), Postives = 180/282 (63.83%), Query Frame = 2
Query: 116 WPRPH----QVTHVIIDEVDTMLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLLEDGDYPKVRTVETRDVHKGLPSMKHAMVDTKGRDKLASLLDVLHQNQGRVERTLVFCNTVKSCQAVEHAVREAGLDCRPYHGEVPSIDRAENLRRFKLGEVRHLVATDIAARGLDMPNVAHVINFDFPLNPIDYLHRSGRTARMGATTGVAAQGRVTSLLAKRDRVLATAIEKAVLSGGRLDELSSRREDYLEPGQRLAM------PQRPRRALAAP 931
W + H +V V+IDEVDTML QGF D+ + + P++ + +R +Q IF TAT+T+ VR+ L++ + V +E D+H+ +PSM+H +V TKGRDK+ L +VL+ NQ +++T++FCN++ + AV++ ++E G+D YH ++P DRA NL +FK G V LV TDI RGLD+ +V HVI FDFP +PID+LHR+GRTARMG T G VTS++ K++ LA AI+ A+ LD L++ DY + G+ A+ P PRR P
Sbjct: 204 WKKGHFYMSEVKEVVIDEVDTMLTQGFTGDVMQFLNPIILNDDR--DLQVIFATATMTRPVRKFLQESKFADVEILEAADLHRVVPSMRHVIVQTKGRDKMDVLEEVLNANQ-MMKKTMIFCNSLAAVHAVDNTLQEFGVDVVSYHKDLPVGDRAANLEKFKSGAVSTLVCTDIGQRGLDI-DVDHVILFDFPRSPIDFLHRAGRTARMGKT------GTVTSIIHKKEYTLARAIDFAIKKDLPLDGLTTNPNDYKDGGRLAAIVGRKPKPNDPRRFKPKP 475 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8513.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8513.1.2 >prot_P-wetherbeei_contig8513.1.2 ID=prot_P-wetherbeei_contig8513.1.2|Name=mRNA_P-wetherbeei_contig8513.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=414bp MLMQGFGPDIKKLVGPVLGSVERKNSVQFIFVTATLTKAVRQLLEDGDYPback to top mRNA from alignment at P-wetherbeei_contig8513:2..2762+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8513.1.2 ID=mRNA_P-wetherbeei_contig8513.1.2|Name=mRNA_P-wetherbeei_contig8513.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2761bp|location=Sequence derived from alignment at P-wetherbeei_contig8513:2..2762+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8513:2..2762+ >mRNA_P-wetherbeei_contig8513.1.2 ID=mRNA_P-wetherbeei_contig8513.1.2|Name=mRNA_P-wetherbeei_contig8513.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1242bp|location=Sequence derived from alignment at P-wetherbeei_contig8513:2..2762+ (Phaeothamnion wetherbeei SAG_119_79)back to top |