mRNA_P-wetherbeei_contig8484.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8484.1.1
Unique NamemRNA_P-wetherbeei_contig8484.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: A0A0K6H1C1_9NEIS (Acyl-coenzyme A thioesterase PaaI, contains HGG motif n=1 Tax=Gulbenkiania indica TaxID=375574 RepID=A0A0K6H1C1_9NEIS)

HSP 1 Score: 137 bits (345), Expect = 2.980e-39
Identity = 64/103 (62.14%), Postives = 84/103 (81.55%), Query Frame = 1
Query:    7 QVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            +VQNHI GVHA  MAL +ETATG VV MNVPD  +M++KSMKV++ KRA GN+ AVATL P+Q+E + +T+KG+  V VVVTD+ G+ PI+CEM+WAW+PK+R
Sbjct:   62 KVQNHIKGVHAAAMALLAETATGFVVGMNVPDDKLMLLKSMKVDYLKRAQGNMRAVATLLPEQIEAMHTTEKGNVTVPVVVTDDSGEAPIQCEMIWAWVPKKR 164          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: A0A8K1CSM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSM9_PYTOL)

HSP 1 Score: 136 bits (343), Expect = 6.540e-39
Identity = 61/103 (59.22%), Postives = 88/103 (85.44%), Query Frame = 1
Query:    7 QVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            +VQNHIGGVHACGMAL +E+A+G+V  MNVPD+H+ +IKSM V +K+ A G+L AVA+LTP+Q++E+ S+++G+ +VDV VTD  G++PIEC+MVWAW+ K++
Sbjct:   64 RVQNHIGGVHACGMALLAESASGMVFGMNVPDTHIPLIKSMTVRYKRVAKGDLKAVASLTPEQIKEITSSERGEVLVDVKVTDSSGEQPIECDMVWAWVAKKK 166          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: W4FW35_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FW35_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.740e-39
Identity = 63/103 (61.17%), Postives = 86/103 (83.50%), Query Frame = 1
Query:    7 QVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            +VQNHIGGVHACGMAL +E+A+GVV  +NV D+H+ ++KSM + + KRA G+L AVATLTP+Q E ++  DKG+ VVDVV+TDE+G++P+EC+M WAW PK+R
Sbjct:   63 RVQNHIGGVHACGMALLAESASGVVFGVNVKDTHLPLLKSMSINYVKRAHGDLKAVATLTPEQREAIQRDDKGNLVVDVVLTDEKGEQPVECQMTWAWTPKKR 165          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: A0A1C6MXR4_9NEIS (Acyl-coenzyme A thioesterase PaaI, contains HGG motif n=2 Tax=Vogesella TaxID=57739 RepID=A0A1C6MXR4_9NEIS)

HSP 1 Score: 135 bits (340), Expect = 1.810e-38
Identity = 66/103 (64.08%), Postives = 83/103 (80.58%), Query Frame = 1
Query:    7 QVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            +VQNHI G+HA  MAL +ETATG VV MNVPD  +M++KSMKV + KRA G++ AVATL+P+QV  + S DKGD +VDVVVTD+ G+ PI CEMVWAW+PK+R
Sbjct:   62 KVQNHIQGLHAAAMALLAETATGFVVGMNVPDDKLMLLKSMKVSYFKRAQGDMRAVATLSPEQVGRMFSEDKGDVLVDVVVTDQSGESPIACEMVWAWVPKKR 164          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: A0A2D4C6H2_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6H2_PYTIN)

HSP 1 Score: 138 bits (348), Expect = 2.640e-38
Identity = 64/101 (63.37%), Postives = 85/101 (84.16%), Query Frame = 1
Query:    7 QVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPK 309
            +VQNHIGGVHACGMAL +E+ATG+V  MNVPDSH+ +IKSM V +K+ A G L AVA+LTP+Q++++ S+D+G+ +VDV VTD  G++PIECEMVWAW+ K
Sbjct:   63 RVQNHIGGVHACGMALLAESATGMVFGMNVPDSHIPLIKSMTVRYKRVAKGELQAVASLTPEQIKDITSSDRGEVLVDVKVTDSTGEQPIECEMVWAWVAK 163          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: A0A0F3KBQ4_9NEIS (Uncharacterized protein n=8 Tax=Aquitalea TaxID=407217 RepID=A0A0F3KBQ4_9NEIS)

HSP 1 Score: 134 bits (338), Expect = 3.540e-38
Identity = 64/103 (62.14%), Postives = 82/103 (79.61%), Query Frame = 1
Query:    7 QVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            +VQNHI GVHA  MAL +ETA+G VV MNVPD  +M++KSMKV + KRA G++ AVATLT +Q+  + +TDKGD +VDV VTDE G+ P+ CEMVWAW+PK+R
Sbjct:   62 KVQNHIKGVHAAAMALLAETASGFVVGMNVPDDKLMLLKSMKVNYVKRAQGDMRAVATLTDEQIRSMYTTDKGDVLVDVTVTDESGESPVVCEMVWAWVPKKR 164          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: A0A662WWF6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWF6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.730e-38
Identity = 67/103 (65.05%), Postives = 81/103 (78.64%), Query Frame = 1
Query:    7 QVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            +VQNHIGGVHACGMAL +E+A+GVV  MNV DS + VIKSM + + KRA G+L AVATLTP QV+E+ S DKG+ +V+V VTD  G  PIECEM+WAWI K R
Sbjct:   61 RVQNHIGGVHACGMALLAESASGVVFGMNVRDSCIPVIKSMSIRYTKRAQGDLQAVATLTPAQVQEINSKDKGEVLVEVQVTDATGATPIECEMLWAWISKTR 163          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: N8WUL4_9GAMM (Uncharacterized protein n=20 Tax=Moraxellaceae TaxID=468 RepID=N8WUL4_9GAMM)

HSP 1 Score: 133 bits (334), Expect = 5.210e-38
Identity = 63/102 (61.76%), Postives = 85/102 (83.33%), Query Frame = 1
Query:   10 VQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            +QNHIG +HAC MAL +ETATG V AMNVPDS V++IKS+KV+FK+   G +TAVATLTP+Q + ++S++KG+T+V V+VTDE G+ PI+CEM+WAWI K +
Sbjct:   27 MQNHIGQIHACAMALLAETATGFVTAMNVPDSAVVLIKSLKVDFKRPTKGAMTAVATLTPEQQQLMQSSEKGETLVQVIVTDETGEAPIQCEMLWAWIAKNQ 128          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: A0A1K2HNV5_9BURK (Acyl-coenzyme A thioesterase PaaI, contains HGG motif n=3 Tax=Chitinimonas TaxID=240411 RepID=A0A1K2HNV5_9BURK)

HSP 1 Score: 134 bits (336), Expect = 6.910e-38
Identity = 64/101 (63.37%), Postives = 79/101 (78.22%), Query Frame = 1
Query:   13 QNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            QNHI GVHA  MAL +ETATG  V MN+PD  + ++KSMKVE+KKRAVG+L AVA LT +Q+ +VR+ +KGD  V V VTDE G  PI+CEM+WAWIPK+R
Sbjct:   64 QNHIKGVHAAAMALLAETATGFAVGMNLPDDKLPLLKSMKVEYKKRAVGDLKAVAALTAEQIAQVRTLEKGDVTVPVTVTDESGNEPIQCEMIWAWIPKKR 164          
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Match: A0A1V9Y8Y7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8Y7_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.880e-37
Identity = 62/103 (60.19%), Postives = 83/103 (80.58%), Query Frame = 1
Query:    7 QVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKRAVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAWIPKRR 315
            +VQNHIGGVHACGMAL +E+A+G+V  MNV DSH+ ++KSM +++ KRA G+L A+ATLT  Q  E+ S DKGD +V+VV+TDE+G  P+E EM WAW+PKR+
Sbjct:   64 RVQNHIGGVHACGMALLAESASGMVFGMNVKDSHLPLLKSMSMKYVKRAKGDLKAIATLTDAQRNEILSADKGDVLVNVVLTDEDGNSPVEAEMCWAWVPKRK 166          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8484.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0K6H1C1_9NEIS2.980e-3962.14Acyl-coenzyme A thioesterase PaaI, contains HGG mo... [more]
A0A8K1CSM9_PYTOL6.540e-3959.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4FW35_9STRA6.740e-3961.17Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A1C6MXR4_9NEIS1.810e-3864.08Acyl-coenzyme A thioesterase PaaI, contains HGG mo... [more]
A0A2D4C6H2_PYTIN2.640e-3863.37Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A0F3KBQ4_9NEIS3.540e-3862.14Uncharacterized protein n=8 Tax=Aquitalea TaxID=40... [more]
A0A662WWF6_9STRA4.730e-3865.05Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
N8WUL4_9GAMM5.210e-3861.76Uncharacterized protein n=20 Tax=Moraxellaceae Tax... [more]
A0A1K2HNV5_9BURK6.910e-3863.37Acyl-coenzyme A thioesterase PaaI, contains HGG mo... [more]
A0A1V9Y8Y7_9STRA2.880e-3760.19Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8484contigP-wetherbeei_contig8484:37..689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1217710.F969_02140
PFAMsDUF4442
Model size315
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.54e-39
EggNOG OGsCOG2050@1|root,COG2050@2|Bacteria,1RHNM@1224|Proteobacteria,1S691@1236|Gammaproteobacteria,3NKM9@468|Moraxellaceae
DescriptionDomain of unknown function (DUF4442)
Cds size315
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187042.9591525-CDS-P-wetherbeei_contig8484:36..1931683187042.9591525-CDS-P-wetherbeei_contig8484:36..193Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8484 37..193 +
1683187042.9735-CDS-P-wetherbeei_contig8484:531..6891683187042.9735-CDS-P-wetherbeei_contig8484:531..689Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8484 532..689 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8484.1.1prot_P-wetherbeei_contig8484.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8484 37..689 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8484.1.1

>prot_P-wetherbeei_contig8484.1.1 ID=prot_P-wetherbeei_contig8484.1.1|Name=mRNA_P-wetherbeei_contig8484.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp
VNQVQNHIGGVHACGMALASETATGVVVAMNVPDSHVMVIKSMKVEFKKR
AVGNLTAVATLTPQQVEEVRSTDKGDTVVDVVVTDEEGKRPIECEMVWAW
IPKRR
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mRNA from alignment at P-wetherbeei_contig8484:37..689+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8484.1.1 ID=mRNA_P-wetherbeei_contig8484.1.1|Name=mRNA_P-wetherbeei_contig8484.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=653bp|location=Sequence derived from alignment at P-wetherbeei_contig8484:37..689+ (Phaeothamnion wetherbeei SAG_119_79)
GTTAACCAGGTGCAAAACCACATCGGCGGCGTCCACGCCTGCGGCATGGC GCTCGCCAGCGAGACGGCGACGGGCGTCGTGGTCGCCATGAACGTGCCGG ACTCGCACGTCATGGTCATAAAGAGCATGAAGGTCGAGTTCAAGAAGCGC GCCGTCGGTGAGTTTTGGCATGTTGCCGAAAGTAGAGGGGTTGGCAACAG GTTTTCTTTTCGTGCGCGGTTTTAAACAGGTTTTGGAGTTTCTGCTGGTA GCCTTTGCAGAACGGCAAGAAAGCAGCGGATATCGACGCAATTGTTTTTG CAGGGCGAAGCTCTCCCGAGTATGCTGTGTTTCTCATTCTTCTCTTTCTT CTCTGCCACCCCTATCTCCACCGTCGCCTCCGCCCCTACAAAACACCATC GCTGCTGCAAACCGCCGTCGCGGCCGCATAACACCATTGCCATTGTCAAC CCCACCACCCCCATCGCCACCGACGCGCCGTCACCGGCATGGCAGGGAAT CTGACGGCGGTGGCGACGTTGACGCCGCAGCAGGTGGAGGAAGTGCGGTC GACGGACAAGGGGGACACCGTGGTCGACGTTGTCGTAACGGACGAGGAGG GGAAGCGGCCCATCGAGTGCGAGATGGTGTGGGCATGGATCCCCAAGCGG CGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8484:37..689+

>mRNA_P-wetherbeei_contig8484.1.1 ID=mRNA_P-wetherbeei_contig8484.1.1|Name=mRNA_P-wetherbeei_contig8484.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig8484:37..689+ (Phaeothamnion wetherbeei SAG_119_79)
GTTAACCAGGTGCAAAACCACATCGGCGGCGTCCACGCCTGCGGCATGGC
GCTCGCCAGCGAGACGGCGACGGGCGTCGTGGTCGCCATGAACGTGCCGG
ACTCGCACGTCATGGTCATAAAGAGCATGAAGGTCGAGTTCAAGAAGCGC
GCCGTCGGGAATCTGACGGCGGTGGCGACGTTGACGCCGCAGCAGGTGGA
GGAAGTGCGGTCGACGGACAAGGGGGACACCGTGGTCGACGTTGTCGTAA
CGGACGAGGAGGGGAAGCGGCCCATCGAGTGCGAGATGGTGTGGGCATGG
ATCCCCAAGCGGCGG
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