mRNA_P-wetherbeei_contig8474.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: D8LMR5_ECTSI (Zinc finger, FYVE domain containing 28 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMR5_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 2.190e-12 Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 55 DWVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCSAHR 180
+W+ NSAR+ CL C+R F+L+ R+HHCR+CGE+VCG CS HR
Sbjct: 33 EWIPNSARNSCLHCERPFTLILRRHHCRMCGELVCGLCSPHR 74
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: A0A6H5JNT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT5_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 2.670e-12 Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 55 DWVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCSAHR 180
+W+ NSAR+ CL C+R F+L+ R+HHCR+CGE+VCG CS HR
Sbjct: 837 EWIPNSARNSCLHCERPFTLILRRHHCRMCGELVCGPCSPHR 878
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: A0A397DHR0_9STRA (FYVE-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DHR0_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.020e-12 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 28 LEITTESLRDWVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCSAHR 180
L++ + + DWV +S R C+LCDR FS RKHHCR CGE++C CS+HR
Sbjct: 4 LDVELKPVGDWVTDSKRRACVLCDRKFSTFVRKHHCRACGEVICKNCSSHR 54
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: A0A3L6VMC4_9STRA (FYVE-type domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VMC4_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.590e-12 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 28 LEITTESLRDWVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCSAHR 180
L++ + + DWV++S R C+LCDR FS RKHHCR CGE++C CS+HR
Sbjct: 4 LDVELKPVADWVNDSKRRACVLCDRKFSTFVRKHHCRACGEVICKNCSSHR 54
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: A0A836C8R8_9STRA (FYVE zinc finger-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8R8_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 5.290e-11 Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 49 LRDWVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCSAHRA 183
L W+ N+ C LC+R F++V R+HHCR+CGE+VC +CS HRA
Sbjct: 1 LGTWMPNANSMCCRLCERTFTVVRRRHHCRMCGELVCNQCSPHRA 45
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: A0A397AVI5_9STRA (FYVE-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AVI5_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.080e-10 Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 55 DWVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCSA 174
DWV ++AR C +C + F ++ RKHHCR+CGEIVCG CS+
Sbjct: 20 DWVPDNARRDCYVCRKTFHVLRRKHHCRVCGEIVCGNCSS 59
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: A0A024UGW9_9STRA (FYVE-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGW9_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.390e-10 Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 55 DWVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCS 171
+WV + AR C +C + F+LV RKHHCR+CGEIVCG C+
Sbjct: 20 EWVPDKARHVCYICRKAFNLVRRKHHCRVCGEIVCGSCT 58
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: R1BV73_EMIHU (FYVE-type domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BV73_EMIHU) HSP 1 Score: 58.2 bits (139), Expect = 4.680e-10 Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 28 LEITTESLRDWVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCS 171
L +T+E WV N+ R C +C + F L+ RKHHCR+CGE++CG CS
Sbjct: 4 LALTSEE-PGWVPNNERRGCNICQKKFGLLRRKHHCRLCGEVICGDCS 50
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: G4ZCM7_PHYSP (FYVE-type domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCM7_PHYSP) HSP 1 Score: 57.8 bits (138), Expect = 7.270e-10 Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 28 LEITTESLR--DWVDNSARDQCLLCDRVFS-LVSRKHHCRICGEIVCGRCSAHR 180
+ + ESLR WV N+ R +C++C R F+ L R+HHCR+CGE++C CS H+
Sbjct: 1 MSLHLESLRTLQWVRNAERTECVVCCRRFNQLTRRRHHCRLCGEVICRECSVHK 54
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Match: A0A485L0Q8_9STRA (Aste57867_14238 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0Q8_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 7.340e-10 Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 58 WVDNSARDQCLLCDRVFSLVSRKHHCRICGEIVCGRCSAHRA 183
WV ++AR C +C R F L +HHCR CGE++CG+CS HRA
Sbjct: 279 WVPSTARTSCAVCGRSFGLFRHRHHCRACGEVICGKCSIHRA 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8474.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8474.1.1 >prot_P-wetherbeei_contig8474.1.1 ID=prot_P-wetherbeei_contig8474.1.1|Name=mRNA_P-wetherbeei_contig8474.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=61bp MALAAAQLPLEITTESLRDWVDNSARDQCLLCDRVFSLVSRKHHCRICGEback to top mRNA from alignment at P-wetherbeei_contig8474:1534..1716- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8474.1.1 ID=mRNA_P-wetherbeei_contig8474.1.1|Name=mRNA_P-wetherbeei_contig8474.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=183bp|location=Sequence derived from alignment at P-wetherbeei_contig8474:1534..1716- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8474:1534..1716- >mRNA_P-wetherbeei_contig8474.1.1 ID=mRNA_P-wetherbeei_contig8474.1.1|Name=mRNA_P-wetherbeei_contig8474.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=183bp|location=Sequence derived from alignment at P-wetherbeei_contig8474:1534..1716- (Phaeothamnion wetherbeei SAG_119_79)back to top |