mRNA_P-wetherbeei_contig8447.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: A0A521XGL3_9PROT (MFS transporter n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XGL3_9PROT) HSP 1 Score: 349 bits (895), Expect = 1.540e-111 Identity = 181/330 (54.85%), Postives = 238/330 (72.12%), Query Frame = 2
Query: 818 ALPARLLAIVFLPFAAGFFLSILFRNVNAVISKDIAGEFSLSSSELGLLTSTYFIAFAALQVPLGIFLDRYGPRRVTAALVLVAAAGALAFAAAGGLGGLTLGRALIGVGVSACLMGSMKAFTLWFPLERMATLNGWILAIGALGAVAATVPVELATSSFGWRAMFTGLALLSLSVAICIFLVVPEKPVPGAKELWGEQLSRIAEIFASPAFWRIGLSLVLLQGSYQALFGLWLVPWLMDTQSLPRGEAARWLMYAALSYAVASVAFGQGADRMAARGLSRLRILKWGTGFGVACFGLLTFAPPQWKLAALLAYTFGAVAPILAYSILSR 1807
+LP RLLA+VF PFAAGFFLS +FRNVNAVI++D+A EFSLS +E+GLLTS Y ++F A+QVP+G+FLDRYGPRRV A+L+ +A GAL FA AG G L LGRALIG+GVSACLMGS+KAFTLWFP R+ATLNGW++A G +G +AAT P+E + GWRA+F G+A + A IF +VPEKP+PGA E WG +R+ IF +P+FWRIGL L++ G+YQA+ GLWL PWL D L R A L AL+Y++ ++ +G AD +A RG+SRL + K G VA F ++ F K+ L+ Y F +++ LAY++L+R
Sbjct: 12 SLPPRLLALVFAPFAAGFFLSYVFRNVNAVIARDLAAEFSLSPAEIGLLTSMYLLSFTAMQVPVGVFLDRYGPRRVVASLLGIAGLGALGFALAGTFGELALGRALIGLGVSACLMGSIKAFTLWFPPARLATLNGWMIAFGGVGGLAATAPLEALLAPLGWRAVFVGMAAGCVLAAAAIFFIVPEKPLPGAGEGWGVAFARVGRIFGTPSFWRIGLPLMVCHGAYQAMQGLWLAPWLTDVGGLARAAMAAHLFATALAYSIGALFYGWLADFLADRGVSRLGLYKLGAAISVAAFVVIAFDLAPAKMPLLMVYGFFSISAALAYALLTR 341
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: A0A246QAB2_9BURK (ABC transporter permease n=2 Tax=Achromobacter TaxID=222 RepID=A0A246QAB2_9BURK) HSP 1 Score: 337 bits (865), Expect = 2.630e-109 Identity = 173/255 (67.84%), Postives = 211/255 (82.75%), Query Frame = 1
Query: 7 EKLKTFLYPLATFVVLVALWEAAIRVFKVPNFILPTPYAVLEALQRGYIEGLFWKHFLFTLQSMVFGYVLGCTLAFVLGCLFAESRTVEQMFLPFVVALQSMPKVALAPLIIVWFGFGLESKVVMVALVCFFPMFINIAVGLKQTNPALLDLMHAFSASRWHILTRIKIPSAAGHVFAGLQIAIVLGLIGAVVAEFVSSTKGLGHLINAAAVNLETNTMFAALLSLAVLGVAGSLTIRFLHSRIVFWDKGSASQT 771
EKLK+ +YPL +L+ LW A++ + VPN++LP VL AL RGY++G FW F +TL SM GYV GC++AFV+G LFAE R++E++ PFV+ LQSMPKVALAPLI+VWFGFGLESK VMVALVCFFPMF+N AVGLK T+PAL+DLM AFSAS WHILTRIKIPSAAGH+FA LQI+IVLGLIGAVVAEFVS+TKGLG+LINAA L+T+TMFAAL+SLAVLG+AGS I+ LH R+VFWD+ A+++
Sbjct: 2 EKLKSVVYPLILLALLLGLWVVAVKYWAVPNYVLPPLDGVLAALYRGYVQGAFWGDFGYTLASMSIGYVAGCSIAFVVGVLFAEFRSLERLLYPFVLGLQSMPKVALAPLILVWFGFGLESKAVMVALVCFFPMFVNTAVGLKSTDPALIDLMRAFSASHWHILTRIKIPSAAGHIFAALQISIVLGLIGAVVAEFVSATKGLGYLINAATTTLDTSTMFAALISLAVLGIAGSQLIKLLHRRLVFWDRSLATRS 256
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: A0A1H2PQ08_9BURK (NitT/TauT family transport system permease protein n=1 Tax=Chitinasiproducens palmae TaxID=1770053 RepID=A0A1H2PQ08_9BURK) HSP 1 Score: 337 bits (864), Expect = 3.840e-109 Identity = 178/261 (68.20%), Postives = 212/261 (81.23%), Query Frame = 1
Query: 1 MNEKLKTFLYPLATFVVLVALWEAAIRVFKVPNFILPTPYAVLEALQRGYIEGLFWKHFLFTLQSMVFGYVLGCTLAFVLGCLFAESRTVEQMFLPFVVALQSMPKVALAPLIIVWFGFGLESKVVMVALVCFFPMFINIAVGLKQTNPALLDLMHAFSASRWHILTRIKIPSAAGHVFAGLQIAIVLGLIGAVVAEFVSSTKGLGHLINAAAVNLETNTMFAALLSLAVLGVAGSLTIRFLHSRIVFWDKGSASQTAAAE 783
MNE++K+ +YPL F +++ALW A F +P +ILP V+ AL+ G++EG +W FL+TL S+V GY GCT AFVLGCLFAE R VE++ PFV+ALQSMPKVALAPLI+VWFGF L SKVVMVALVCFFPMFIN VGLK T PAL+DLM AFSASRW IL RIKIPSAAGH+FAGLQI+IVLGLIGA+VAEFVSSTKGLG LIN+A ++T+TMFAAL SLAVLG+AGS +R+LH RIVFWD+ +ASQT +E
Sbjct: 1 MNERIKSVVYPLILFALILALWSFATSRFGIPTYILPPLSGVVAALRHGFVEGAYWGDFLYTLTSVVSGYAAGCTCAFVLGCLFAEFRPVERVLHPFVLALQSMPKVALAPLILVWFGFDLASKVVMVALVCFFPMFINTVVGLKATPPALIDLMRAFSASRWQILLRIKIPSAAGHIFAGLQISIVLGLIGAIVAEFVSSTKGLGFLINSATAQMDTSTMFAALASLAVLGIAGSQLVRWLHRRIVFWDR-AASQTTLSE 260
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: A0A5E4YT30_9BURK (NitT/TauT family transport system permease protein n=1 Tax=Pandoraea anhela TaxID=2508295 RepID=A0A5E4YT30_9BURK) HSP 1 Score: 335 bits (860), Expect = 1.530e-108 Identity = 173/257 (67.32%), Postives = 209/257 (81.32%), Query Frame = 1
Query: 1 MNEKLKTFLYPLATFVVLVALWEAAIRVFKVPNFILPTPYAVLEALQRGYIEGLFWKHFLFTLQSMVFGYVLGCTLAFVLGCLFAESRTVEQMFLPFVVALQSMPKVALAPLIIVWFGFGLESKVVMVALVCFFPMFINIAVGLKQTNPALLDLMHAFSASRWHILTRIKIPSAAGHVFAGLQIAIVLGLIGAVVAEFVSSTKGLGHLINAAAVNLETNTMFAALLSLAVLGVAGSLTIRFLHSRIVFWDKGSASQT 771
M E+ KT LYPLA LV +W A+ + VPN+ILP+ V AL+RGYI+G FW F FTL S + GYV GC LAFV+G LFAE R++E++ PFV+ LQSMPKVALAPLI+VWFGFGL SKVVMV LVCFFPMF+N AVGLK T+P+L+DLM AFSASRWHILTRIKIPSAAGH+FAGLQI++VLGLIGAVVAEFVSST+GLG+LINAA L+T+TMFAAL+SLA +G+ GS I+ LH R+VFWD+ +S++
Sbjct: 1 MKERTKTVLYPLALLCALVGVWYLAVSRWGVPNYILPSLDGVAAALKRGYIDGAFWGDFRFTLMSTLLGYVSGCVLAFVVGILFAEFRSIERLLYPFVLGLQSMPKVALAPLILVWFGFGLGSKVVMVGLVCFFPMFVNTAVGLKATDPSLIDLMKAFSASRWHILTRIKIPSAAGHIFAGLQISVVLGLIGAVVAEFVSSTEGLGYLINAATTTLDTSTMFAALISLAAMGIGGSQLIKLLHRRLVFWDRSESSRS 257
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: K0MMM7_BORPB (Putative ABC transport proteins, inner membrane component n=15 Tax=Bordetella TaxID=517 RepID=K0MMM7_BORPB) HSP 1 Score: 335 bits (860), Expect = 1.530e-108 Identity = 176/257 (68.48%), Postives = 207/257 (80.54%), Query Frame = 1
Query: 1 MNEKLKTFLYPLATFVVLVALWEAAIRVFKVPNFILPTPYAVLEALQRGYIEGLFWKHFLFTLQSMVFGYVLGCTLAFVLGCLFAESRTVEQMFLPFVVALQSMPKVALAPLIIVWFGFGLESKVVMVALVCFFPMFINIAVGLKQTNPALLDLMHAFSASRWHILTRIKIPSAAGHVFAGLQIAIVLGLIGAVVAEFVSSTKGLGHLINAAAVNLETNTMFAALLSLAVLGVAGSLTIRFLHSRIVFWDKGSASQT 771
M E+ K+ +YPL L+ LW A R VP ++LP VL AL RGY++G FW F FTL SMV GYV GCT AF++G LFAE R +E++ PFV+ALQSMPKVALAPLI+VWFGFGLESK +MVALVCFFPMFIN AVGLK T+PALLDLM AFSASRWHILTRIKIPSAA H+FA LQI++VLGLIGAVVAEF+SS+KGLG+LINAA L+T+TMFAAL+SLAVLG+AGS IR LH ++VFWD+G A +T
Sbjct: 1 MKERTKSIVYPLLLLAALLVLWFIANRYLGVPYYVLPPVEGVLAALYRGYVQGDFWGDFGFTLASMVIGYVGGCTAAFIIGVLFAEYRWLERLLYPFVLALQSMPKVALAPLILVWFGFGLESKAIMVALVCFFPMFINTAVGLKATDPALLDLMRAFSASRWHILTRIKIPSAASHIFAALQISVVLGLIGAVVAEFISSSKGLGYLINAATTTLDTSTMFAALISLAVLGIAGSQLIRALHRKLVFWDRGEAGRT 257
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: W0HSY4_9GAMM (ABC transporter, inner membrane component n=2 Tax=Sodalis TaxID=84565 RepID=W0HSY4_9GAMM) HSP 1 Score: 329 bits (844), Expect = 3.870e-106 Identity = 167/251 (66.53%), Postives = 204/251 (81.27%), Query Frame = 1
Query: 1 MNEKLKTFLYPLATFVVLVALWEAAIRVFKVPNFILPTPYAVLEALQRGYIEGLFWKHFLFTLQSMVFGYVLGCTLAFVLGCLFAESRTVEQMFLPFVVALQSMPKVALAPLIIVWFGFGLESKVVMVALVCFFPMFINIAVGLKQTNPALLDLMHAFSASRWHILTRIKIPSAAGHVFAGLQIAIVLGLIGAVVAEFVSSTKGLGHLINAAAVNLETNTMFAALLSLAVLGVAGSLTIRFLHSRIVFWDK 753
M+E++K+ LYPL +VL+ALW A+ VPN+ILP VL AL+RGYI+G +W F +TL SM+ GY +GC LAF +G LFAE R VE++ PFV+ LQSMPKVALAPLI+VWFGFGL SK VMV +VCFFPMFIN A+GLK T+PAL+DLM AFSASRWHIL RIKIPSAAGH+FA LQI++VLGLIGAVVAEFVSS++GLG+LINAA L+T+TMFA+L+SLA LG+ S IRFLH ++VFWD+
Sbjct: 1 MSERIKSVLYPLLLLIVLIALWHVAVTYGGVPNYILPPVEGVLAALKRGYIDGAYWGDFTYTLSSMLIGYTVGCALAFFIGALFAEVRWVERLLYPFVLGLQSMPKVALAPLILVWFGFGLGSKAVMVGMVCFFPMFINTAIGLKATDPALIDLMRAFSASRWHILLRIKIPSAAGHIFAALQISVVLGLIGAVVAEFVSSSQGLGYLINAATTTLDTSTMFASLISLAFLGIVASQIIRFLHKKLVFWDQ 251
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: A0A1F4FH94_9PROT (MFS domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4FH94_9PROT) HSP 1 Score: 334 bits (857), Expect = 8.510e-106 Identity = 185/337 (54.90%), Postives = 231/337 (68.55%), Query Frame = 2
Query: 794 RMPGVNSPALPARLLAIVFLPFAAGFFLSILFRNVNAVISKDIAGEFSLSSSELGLLTSTYFIAFAALQVPLGIFLDRYGPRRVTAALVLVAAAGALAFAAAGGLGGLTLGRALIGVGVSACLMGSMKAFTLWFPLERMATLNGWILAIGALGAVAATVPVELATSSFGWRAMFTGLALLSLSVAICIFLVVPEKPVPGAKELWGEQLSRIAEIFASPAFWRIGLSLVLLQGSYQALFGLWLVPWLMDTQSLPRGEAARWLMYAALSYAVASVAFGQGADRMAARGLSRLRILKWGTGFGVACFGLLTFAPPQWKLAALLAYTFGAVAPILAYSILS 1804
R+P N PA+ ARL +VF PFAAG+FLS FRNVNAVISKD+A EF+L+ S+LG LTS Y +AFAA Q+PLG+ LDR+GPRRV A L +A AGAL F A L++GRALIG+GVS LMG++KAFTLWFPL R+ATLNG LA+G +G ++AT PVE GWRA+F G+A LS++VA+ IF VVPEKP+PG E Q+ R EIFA FWRI L LV+ YQAL GLWL PWL D LPR A +L+ +AL+Y V SV FG +DR+AA G+SR+ + K G +A F LL LA L Y F A++ LAY++L+
Sbjct: 4 RLPDYN-PAVNARLFVVVFGPFAAGYFLSFFFRNVNAVISKDLAREFALAPSDLGFLTSMYLLAFAAFQLPLGVLLDRFGPRRVLAGLYSIAGAGALVFGLAQDFATLSIGRALIGLGVSGGLMGAIKAFTLWFPLSRLATLNGLYLAVGGIGGLSATAPVEALLGPLGWRALFHGVAGLSVAVALLIFFVVPEKPLPGRGETLATQIRRFGEIFAVQKFWRIALPLVICHAGYQALQGLWLGPWLYDVADLPRASVANYLLASALAYTVGSVFFGVTSDRLAAAGVSRMTMFKLGQVVSLAMFALLAAGVQTGLLAILFVYGFTAISAALAYAVLT 339
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: A0A0H3LI46_BORBR (Putative membrane protein n=18 Tax=Alcaligenaceae TaxID=506 RepID=A0A0H3LI46_BORBR) HSP 1 Score: 318 bits (816), Expect = 6.130e-102 Identity = 155/255 (60.78%), Postives = 209/255 (81.96%), Query Frame = 1
Query: 1 MNEKLKTFLYPLATFVVLVALWEAAIRVFKVPNFILPTPYAVLEALQRGYIEGLFWKHFLFTLQSMVFGYVLGCTLAFVLGCLFAESRTVEQMFLPFVVALQSMPKVALAPLIIVWFGFGLESKVVMVALVCFFPMFINIAVGLKQTNPALLDLMHAFSASRWHILTRIKIPSAAGHVFAGLQIAIVLGLIGAVVAEFVSSTKGLGHLINAAAVNLETNTMFAALLSLAVLGVAGSLTIRFLHSRIVFWDKGSAS 765
M++ +K+FLYPL T VVLV LW A+IR+F VPN++LPTP AVL AL+ GY+EG +W HFLFTLQS V+GY++GC +A V+G + AES T EQ P+++ALQS PKVA+APL++VWFGFG+ SKVVMVAL+ FFPMFIN VG++Q NPA+LDLM AF ASR H+ +K+P+A+GH+FAGLQI++VL LIGAVV+EF+SS++GLG+LI +A+VN++ TMFA L SL V+G+ G+ IRFLH ++VFW++ + +
Sbjct: 1 MSKSVKSFLYPLITGVVLVILWFASIRIFSVPNYLLPTPEAVLNALRIGYVEGQYWPHFLFTLQSTVYGYLIGCGMALVVGTVLAESETFEQFIYPYIIALQSTPKVAIAPLLLVWFGFGMASKVVMVALMSFFPMFINTVVGIRQANPAMLDLMKAFKASRSHVFFHVKLPAASGHIFAGLQISVVLSLIGAVVSEFISSSQGLGYLIQSASVNMDVATMFACLFSLVVIGLTGTNLIRFLHRKLVFWEQSTTA 255
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: A0A522VWI5_9PROT (MFS transporter n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A522VWI5_9PROT) HSP 1 Score: 321 bits (823), Expect = 1.350e-100 Identity = 179/338 (52.96%), Postives = 224/338 (66.27%), Query Frame = 2
Query: 791 PRMPGVNSPALPARLLAIVFLPFAAGFFLSILFRNVNAVISKDIAGEFSLSSSELGLLTSTYFIAFAALQVPLGIFLDRYGPRRVTAALVLVAAAGALAFAAAGGLGGLTLGRALIGVGVSACLMGSMKAFTLWFPLERMATLNGWILAIGALGAVAATVPVELATSSFGWRAMFTGLALLSLSVAICIFLVVPEKPVPGAKELWGEQLSRIAEIFASPAFWRIGLSLVLLQGSYQALFGLWLVPWLMDTQSLPRGEAARWLMYAALSYAVASVAFGQGADRMAARGLSRLRILKWGTGFGVACFGLLTFAPPQWKLAALLAYTFGAVAPILAYSILS 1804
PR+P NS P +L +VF PFAAG+FLS FRNVNAVISKD+ EFSL+ S+LG LTS Y +AFAA Q+PLG+ LDRYGPRRV AAL +A AGAL F A L++GRALIG+GVS LMG++KAFT+WFPL R+ATLNG LA+G +G ++AT PVE GWRA+F +A LS+ A IF VVPEKP PG E Q+ R EIF++ FWRI L LV+ YQAL GLWL PWL D LPR A +L+ A+++ V SV FG +DR+AA G+SR+ + K G +A F LL A L Y F A++ LAY++L+
Sbjct: 12 PRLPDYNSAVNPRPML-LVFCPFAAGYFLSFFFRNVNAVISKDLVREFSLAPSDLGFLTSMYLLAFAAFQLPLGVLLDRYGPRRVLAALYSIAGAGALIFGLAQDFTTLSIGRALIGLGVSGGLMGAIKAFTMWFPLSRLATLNGLYLAVGGIGGLSATAPVEALLGPLGWRALFYCVAALSVMAAALIFFVVPEKPPPGRGETLATQIRRFGEIFSTQKFWRIALPLVVCHAGYQALQGLWLGPWLYDVAELPRAAVANYLLVTAIAFTVGSVFFGVTSDRLAAAGVSRMTMFKLGQTVSLAMFALLAAGVKTGLFAVLAVYGFTAISAALAYALLT 348
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Match: A0A853FCS0_9BURK (ABC transporter permease n=2 Tax=Pusillimonas soli TaxID=659016 RepID=A0A853FCS0_9BURK) HSP 1 Score: 312 bits (799), Expect = 2.160e-99 Identity = 155/251 (61.75%), Postives = 203/251 (80.88%), Query Frame = 1
Query: 1 MNEKLKTFLYPLATFVVLVALWEAAIRVFKVPNFILPTPYAVLEALQRGYIEGLFWKHFLFTLQSMVFGYVLGCTLAFVLGCLFAESRTVEQMFLPFVVALQSMPKVALAPLIIVWFGFGLESKVVMVALVCFFPMFINIAVGLKQTNPALLDLMHAFSASRWHILTRIKIPSAAGHVFAGLQIAIVLGLIGAVVAEFVSSTKGLGHLINAAAVNLETNTMFAALLSLAVLGVAGSLTIRFLHSRIVFWDK 753
M E +KT LYP T + L+A W A+I VF VPN+++P P AVL AL+ GYI+G +W HF FTL+S V GYV+GC LA V+G + AESRT E+ P++VALQS PK+A+APLI+VWFGFG+ESKVVMVAL+ FFPMFIN VG++QTN ++L+LM FSASR HI +K+P+AAGH+FAGLQI++VLGLIGAVV+EFVSST+GLG++I AA+VN++ TMFA LLSL +G++G+ IR+LH ++VFWD+
Sbjct: 1 MQEIMKTILYPALTALALIAAWIASIEVFNVPNYLVPEPGAVLHALKVGYIDGQYWPHFFFTLKSAVIGYVMGCGLAIVIGTMVAESRTFERFLYPYIVALQSTPKIAIAPLILVWFGFGIESKVVMVALMSFFPMFINTMVGIRQTNASMLNLMQVFSASRTHIFFNVKLPAAAGHIFAGLQISVVLGLIGAVVSEFVSSTQGLGYMIQAASVNMDVATMFACLLSLVAIGLSGTQLIRYLHRKLVFWDE 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8447.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8447.2.1 >prot_P-wetherbeei_contig8447.2.1 ID=prot_P-wetherbeei_contig8447.2.1|Name=mRNA_P-wetherbeei_contig8447.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=337bp MPGVNSPALPARLLAIVFLPFAAGFFLSILFRNVNAVISKDIAGEFSLSSback to top mRNA from alignment at P-wetherbeei_contig8447:991..2797+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8447.2.1 ID=mRNA_P-wetherbeei_contig8447.2.1|Name=mRNA_P-wetherbeei_contig8447.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1807bp|location=Sequence derived from alignment at P-wetherbeei_contig8447:991..2797+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8447:991..2797+ >mRNA_P-wetherbeei_contig8447.2.1 ID=mRNA_P-wetherbeei_contig8447.2.1|Name=mRNA_P-wetherbeei_contig8447.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1011bp|location=Sequence derived from alignment at P-wetherbeei_contig8447:991..2797+ (Phaeothamnion wetherbeei SAG_119_79)back to top |