mRNA_P-wetherbeei_contig8447.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: A0A1H2PP61_9BURK (NitT/TauT family transport system ATP-binding protein n=1 Tax=Chitinasiproducens palmae TaxID=1770053 RepID=A0A1H2PP61_9BURK) HSP 1 Score: 365 bits (936), Expect = 4.120e-125 Identity = 179/250 (71.60%), Postives = 211/250 (84.40%), Query Frame = 1
Query: 28 FHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFSDLVK 777
F A L VTY SSRGPVKA++G+ AT+ GEF+S+LGPSGCGKSTLLK+V+GLLKPS G V L G+ I GPR D+GIVFQQPTLLPWQT L+N+LLPIRTLGL+ GR +A ALL+LVGLEKFAN+YP+ELSGGMQQR+GIARG++HDP LLLMDEPFAALDAMTREHMM ELQRIWMAAGKSV+FITHSIPEAVFLSDR+ VLS RP +++ + LPRPRT ETM + F E+C LRALF+++ +
Sbjct: 9 FRAKGLVVTYDSSRGPVKAIDGLDATVADGEFVSILGPSGCGKSTLLKIVSGLLKPSAGTVELGGASITGPRRDIGIVFQQPTLLPWQTVLQNILLPIRTLGLNRTEGRARADALLRLVGLEKFANNYPHELSGGMQQRIGIARGMIHDPGLLLMDEPFAALDAMTREHMMAELQRIWMAAGKSVIFITHSIPEAVFLSDRVLVLSQRPAHLVKDMTIALPRPRTEETMGTREFGEYCTALRALFNEITR 258
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: A0A853FFX8_9BURK (ABC transporter ATP-binding protein n=1 Tax=Pusillimonas soli TaxID=659016 RepID=A0A853FFX8_9BURK) HSP 1 Score: 353 bits (907), Expect = 2.630e-120 Identity = 176/259 (67.95%), Postives = 212/259 (81.85%), Query Frame = 1
Query: 7 PATLQPLFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFSDLVKFN 783
PA PL ADAL+V Y +S GP+ A++ +S LG +F+SV+GPSGCGKSTL+KV +GLLKP+ G+V L G+ +D PR DVGIVFQQPTLLPW+ L+NVL+P+R LG+D+ A + KA+ LL+LVGLEK+A+HYPNELSGGMQQRVGIARGL+HDP+LLLMDEPF+ALD MTR+HM IELQRIWMA KS +FITHSIPEAVFLSDRI V+SA PG +RE V LPRPRT+ET+A F E C ELRALFS LV+FN
Sbjct: 26 PAASTPLLEADALSVVYKTSNGPITAMQDVSLRLGSSDFVSVVGPSGCGKSTLIKVFSGLLKPTKGSVRLGGTSVDQPRGDVGIVFQQPTLLPWKNVLDNVLVPVRALGMDVPAYKKKAMDLLRLVGLEKYASHYPNELSGGMQQRVGIARGLIHDPSLLLMDEPFSALDTMTRDHMSIELQRIWMATRKSALFITHSIPEAVFLSDRILVMSAHPGTIVREISVNLPRPRTVETLAAPEFNELCAELRALFSQLVQFN 284
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: A0A0T7CSJ6_BORP1 (Putative ABC transport proteins, ATP-binding component n=14 Tax=Bordetella TaxID=517 RepID=A0A0T7CSJ6_BORP1) HSP 1 Score: 352 bits (903), Expect = 4.970e-120 Identity = 177/251 (70.52%), Postives = 203/251 (80.88%), Query Frame = 1
Query: 22 PLFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFSDLV 774
P+F L VTY SSRGP ALEG S T+ +GEFLS+LGPSGCGKSTLLKV AGLLKPS G LRG IDGPR DVGIVFQ TLLPWQ L+NVLLPIRT+G+D+AAG +A ALLK +GLEKF HYP+ELSGGMQQRVGIARGL+HDP+LLLMDEPFAALDAMTRE MM+ELQRIW KSVMFITHSIPEAVFLS ++ VL RP R +RE +++LP PRT ET+A +FA+ C ELR+LFS++
Sbjct: 11 PVFRVQGLEVTYRSSRGPTTALEGFSTTVAEGEFLSILGPSGCGKSTLLKVAAGLLKPSAGVAELRGQAIDGPRRDVGIVFQHATLLPWQNVLDNVLLPIRTMGMDIAAGTARAHALLKTMGLEKFEQHYPHELSGGMQQRVGIARGLIHDPSLLLMDEPFAALDAMTRETMMVELQRIWSETRKSVMFITHSIPEAVFLSSKVVVLGPRPARVLREIDIDLPFPRTEETLASPKFAQLCAELRSLFSNVA 261
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: A0A5E4YS96_9BURK (Bicarbonate transport ATP-binding protein CmpD n=1 Tax=Pandoraea anhela TaxID=2508295 RepID=A0A5E4YS96_9BURK) HSP 1 Score: 351 bits (900), Expect = 1.190e-119 Identity = 181/251 (72.11%), Postives = 206/251 (82.07%), Query Frame = 1
Query: 16 LQPLFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFSD 768
L P+F A+ L VTY SSRG KAL+ S +LG GEFLSVLGPSGCGKSTLLKV +GLL PS G G PI GPR DVGIVFQQ TLLPWQT LENVLLPIRTLG+++ G +A +LLK++GLEKF +HYP ELSGGMQQRVGIARGL+HDP+LLLMDEPFAALDAMTREHMM ELQRIWM KSV+FITHSIPEAVFLS+R+ VLSARP R +RE V+LP PRT ET++ RFAE C+ELRA+FS+
Sbjct: 4 LAPVFRAEKLTVTYQSSRGATKALDSFSTSLGAGEFLSVLGPSGCGKSTLLKVASGLLAPSSGIAEFGGRPIKGPRRDVGIVFQQATLLPWQTVLENVLLPIRTLGMNVEEGALRARSLLKMMGLEKFESHYPYELSGGMQQRVGIARGLIHDPSLLLMDEPFAALDAMTREHMMEELQRIWMETRKSVLFITHSIPEAVFLSNRVIVLSARPARILREVTVDLPVPRTQETLSHPRFAELCSELRAMFSN 254
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: K0MA14_BORPB (Probable ABC transporter, ATP-binding component n=21 Tax=Alcaligenaceae TaxID=506 RepID=K0MA14_BORPB) HSP 1 Score: 348 bits (894), Expect = 2.760e-118 Identity = 176/253 (69.57%), Postives = 207/253 (81.82%), Query Frame = 1
Query: 25 LFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFSDLVKFN 783
L A L+V Y +S+GP+ A++ +S LG GEF+SVLGPSGCGKSTL+KV +GLLKPSGG L G+PID PR DVGIVFQQPTLLPW+T L+NVL+PIR LG+++A GR KA+ LL+LVGLEKFA++YP+ELSGGMQQRVGIARGL+HDPALLLMDEPF+ALD MTR+ M IELQRIWMA KS +FITHSI EAVFLSDRI V+SARPGR IRE V LPRPRTL T+ + F C ELR LF LV+F+
Sbjct: 35 LLTASNLSVVYRTSKGPITAVDNLSLQLGAGEFVSVLGPSGCGKSTLIKVFSGLLKPSGGKALLNGTPIDEPRGDVGIVFQQPTLLPWKTVLDNVLVPIRALGMNVAEGRAKAMELLRLVGLEKFASNYPSELSGGMQQRVGIARGLIHDPALLLMDEPFSALDTMTRDRMSIELQRIWMATRKSALFITHSIAEAVFLSDRIVVMSARPGRIIREVTVNLPRPRTLATLTDPEFTRLCGELRELFDQLVQFD 287
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: UPI001BA5C69B (ABC transporter ATP-binding protein n=3 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BA5C69B) HSP 1 Score: 346 bits (887), Expect = 1.400e-117 Identity = 179/253 (70.75%), Postives = 201/253 (79.45%), Query Frame = 1
Query: 19 QPLFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFSDLVK 777
+P+F L VTY+SSRG KALE + TL +GEFLS+LGPSGCGKSTLLKV AGLL PS G L G PI GPR DVGIVFQQ TLLPWQ ++N+LLPIRTLG+DL GR +A LL+L+GLEKF HYP+ELSGGMQQRVGIARGLVHDP+LLLMDEPFAALDAMTREHMM+ELQRIWM KSV+FITHSIPEAVFLS R+ VLS RP R +R+ +ELP PRT ETM FAE C ELRA+FS K
Sbjct: 11 EPVFQTKNLDVTYSSSRGKTKALEDFTTTLEKGEFLSILGPSGCGKSTLLKVAAGLLPPSSGVAELDGRPITGPRRDVGIVFQQATLLPWQNVIDNILLPIRTLGMDLDKGRARARELLELMGLEKFEKHYPHELSGGMQQRVGIARGLVHDPSLLLMDEPFAALDAMTREHMMVELQRIWMDTRKSVIFITHSIPEAVFLSSRVLVLSPRPARIMRDVNIELPLPRTEETMGLPAFAELCAELRAMFSPRAK 263
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: A0A246QAY1_9BURK (ABC transporter n=2 Tax=Achromobacter TaxID=222 RepID=A0A246QAY1_9BURK) HSP 1 Score: 345 bits (884), Expect = 1.010e-116 Identity = 183/258 (70.93%), Postives = 203/258 (78.68%), Query Frame = 1
Query: 1 TAPA-TLQPLFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFSDL 771
T PA T + +F AD LAVTY SSRGPV AL G S TL +GEFLSVLGPSGCGKSTLLKV +GLLKPS G L G+ I GPR DVGIVFQ TLLPWQT LENV+LPIRTLG+D G A LL+++GLE+F NHYP+ELSGGMQQRVGIARGLVHDP LLLMDEPFAALDAMTRE MM+ELQRIWM KSV+FITHSIPEAVFLS RI VLS RP R ++E V+LP PR +T+ RF E C ELRALFS +
Sbjct: 31 TTPAGTAKAVFRADDLAVTYRSSRGPVPALSGFSTTLHEGEFLSVLGPSGCGKSTLLKVASGLLKPSAGVAELGGTRIQGPRKDVGIVFQHATLLPWQTVLENVMLPIRTLGMDRQRGLIHARELLRMMGLEQFENHYPHELSGGMQQRVGIARGLVHDPNLLLMDEPFAALDAMTRESMMVELQRIWMETRKSVLFITHSIPEAVFLSSRIIVLSPRPARIVKEMHVDLPLPRNEQTLGSPRFGELCAELRALFSSI 288
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: W0HN72_9GAMM (ABC transporter, ATP binding component n=2 Tax=Sodalis TaxID=84565 RepID=W0HN72_9GAMM) HSP 1 Score: 343 bits (879), Expect = 1.870e-116 Identity = 176/246 (71.54%), Postives = 200/246 (81.30%), Query Frame = 1
Query: 25 LFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALF 762
+F A+ L VTY SSRG AL+ + TL QGEFLS+LGPSGCGKSTL+KV AGLL PS G L G+PI GPR DVGIVFQQ TLLPWQT L+NV+LPIRTLG+D+ G +A ALL+LVGLEKF +HYP+ELSGGMQQRVGIARGL+HDP+LLLMDEPFAALDA++REHMM+ELQRIWM KSV+FITHSIPEAVFLS +I VLS RP + IRE EV+LP PR ETMA RF E C ELR LF
Sbjct: 7 VFRAENLQVTYQSSRGATPALDNFNTTLAQGEFLSILGPSGCGKSTLMKVAAGLLTPSAGIAELDGTPITGPRRDVGIVFQQATLLPWQTVLQNVMLPIRTLGMDIKQGEIRARALLRLVGLEKFEHHYPHELSGGMQQRVGIARGLIHDPSLLLMDEPFAALDALSREHMMVELQRIWMENRKSVIFITHSIPEAVFLSTKIIVLSPRPAKIIREIEVDLPLPRNEETMASARFNELCTELRHLF 252
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: A0A7D4I0T6_9BURK (ABC transporter ATP-binding protein n=3 Tax=Achromobacter TaxID=222 RepID=A0A7D4I0T6_9BURK) HSP 1 Score: 343 bits (880), Expect = 2.630e-116 Identity = 177/255 (69.41%), Postives = 205/255 (80.39%), Query Frame = 1
Query: 19 QPLFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFSDLVKFN 783
+PL AD ++V Y SS+GP+ A++ +S LG GEF+SVLGPSGCGKSTL+KV +GLL S G L G+PID PR DVGIVFQQPTLLPW+T L+NVL+PIR L D+ AG +AL LL+LVGLEKFAN+YP+ELSGGMQQRVGIARGLVHDPALLLMDEPF+ALD MTR+ M IELQRIWMA KS +FITHSI EAVFLSDRI V+SARPGR IRE V+LPRPRTL T+ + F C ELR LF LVKF+
Sbjct: 23 RPLLTADNVSVVYRSSKGPITAVDNLSLQLGAGEFVSVLGPSGCGKSTLVKVFSGLLTTSSGKALLNGTPIDKPRGDVGIVFQQPTLLPWKTVLDNVLVPIRALRKDVEAGTARALELLRLVGLEKFANNYPSELSGGMQQRVGIARGLVHDPALLLMDEPFSALDTMTRDRMSIELQRIWMATRKSALFITHSIAEAVFLSDRIVVMSARPGRIIREVAVDLPRPRTLATLNDPEFTRLCAELRELFDQLVKFD 277
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Match: UPI00164D004F (ABC transporter ATP-binding protein n=1 Tax=Ramlibacter sp. GTP1 TaxID=2079448 RepID=UPI00164D004F) HSP 1 Score: 337 bits (863), Expect = 5.240e-114 Identity = 166/241 (68.88%), Postives = 201/241 (83.40%), Query Frame = 1
Query: 43 LAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCGKSTLLKVVAGLLKPSGGAVTLRGSPIDGPRPDVGIVFQQPTLLPWQTALENVLLPIRTLGLDLAAGRDKALALLKLVGLEKFANHYPNELSGGMQQRVGIARGLVHDPALLLMDEPFAALDAMTREHMMIELQRIWMAAGKSVMFITHSIPEAVFLSDRIAVLSARPGRTIREFEVELPRPRTLETMAEKRFAEHCNELRALFS 765
L V Y SSRGPV+AL+ +S + G F+SVLGPSGCGKSTLLK+ +GLLKP+ G + L G PIDGPR +VGIVFQQPTLLPW+T L+NVL+P+R +G D+ A R++AL LLK+V L++FA HYP+ELSGGMQQRVGI R LVHDP+LLLMDEPFAALDAMTRE MM+ELQRIW GKSV+FITHSIPEAVFLSDR+ VLS RPGR ++ E++LPRPR+++TMA RFAE NELR +F+
Sbjct: 13 LDVVYASSRGPVQALQQLSFDVAPGAFVSVLGPSGCGKSTLLKLASGLLKPTSGNIALAGQPIDGPRREVGIVFQQPTLLPWKTVLDNVLVPVRAMGGDVRAARERALDLLKMVKLDQFAGHYPHELSGGMQQRVGIVRALVHDPSLLLMDEPFAALDAMTRESMMVELQRIWSTTGKSVLFITHSIPEAVFLSDRVVVLSPRPGRVVQTLEIDLPRPRSIQTMASPRFAELSNELREVFA 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8447.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8447.1.1 >prot_P-wetherbeei_contig8447.1.1 ID=prot_P-wetherbeei_contig8447.1.1|Name=mRNA_P-wetherbeei_contig8447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp TAPATLQPLFHADALAVTYTSSRGPVKALEGMSATLGQGEFLSVLGPSGCback to top mRNA from alignment at P-wetherbeei_contig8447:195..980+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8447.1.1 ID=mRNA_P-wetherbeei_contig8447.1.1|Name=mRNA_P-wetherbeei_contig8447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig8447:195..980+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8447:195..980+ >mRNA_P-wetherbeei_contig8447.1.1 ID=mRNA_P-wetherbeei_contig8447.1.1|Name=mRNA_P-wetherbeei_contig8447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig8447:195..980+ (Phaeothamnion wetherbeei SAG_119_79)back to top |