mRNA_P-wetherbeei_contig8440.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8440.1.1
Unique NamemRNA_P-wetherbeei_contig8440.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: D8LSU2_ECTSI (MAGE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU2_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.350e-42
Identity = 95/263 (36.12%), Postives = 153/263 (58.17%), Query Frame = 2
Query:  440 VKGKEKDRASSLSETSLELLIGNMMRFLLMKGARREPITKVQMQKEVIGDD-KKHRVFNVVLDEANQRLKRTLGLELKDTLPGKPWSVKDTWYLVNARDIGAGANKESHSSAHFEELADNSEAPQRGLLMVVLALIFCQPDQKLTEDVLFRRLHD-LDPNIPGPTIGGGKAKSKGRVTARGAAEVDGLGDVHALLSTFVKQHYL---RVDKTETPEG-EPLNRYQLGSRTYVEVGRRQISTFIADTLQVRVDATALQQLHEDE 1210
            ++ K++ + + LS+ + + L+  MMRFLLMKG   EP+T+ ++   V+G+  +K  V   +L++A+++L++ +G ++K  LP KPW VKDT+Y+VN  +          +  HF+E+        RGLL++VL+++FC  D+ + E+ LF++LHD +D  +P     G   K+K RV       VDGLGDVH  L+ F KQHYL    VDK     G E +  Y +G R+ +E+G RQ+   +A  +   +D + L  L E E
Sbjct:   14 IEEKDQKKGNELSDLAKKDLVKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKFILNKADEKLQQGMGFKIKTPLPDKPWFVKDTFYVVNVLN----------NEQHFKEVLRGKGQAGRGLLVLVLSIVFCSSDKSVAENQLFKKLHDHVDKRVPEKAWNGNNPKNKVRV------HVDGLGDVHEHLAMFAKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSMDPSDLLGLEEQE 260          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: A0A6H5KX60_9PHAE (MAGE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX60_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 4.380e-41
Identity = 97/263 (36.88%), Postives = 152/263 (57.79%), Query Frame = 2
Query:  440 VKGKEKDRASSLSETSLELLIGNMMRFLLMKGARREPITKVQMQKEVIGDD-KKHRVFNVVLDEANQRLKRTLGLELKDTLPGKPWSVKDTWYLVNARDIGAGANKESHSSAHFEELADNSEAPQRGLLMVVLALIFCQPDQKLTEDVLFRRLHD-LDPNIPGPTIGGGKAKSKGRVTARGAAEVDGLGDVHALLSTFVKQHYL---RVDKTETPEG-EPLNRYQLGSRTYVEVGRRQISTFIADTLQVRVDATALQQLHEDE 1210
            ++ K++ + + LS+ + + LI  MMRFLLMKG   EP+T+ ++   V+G+  +K  V   +L +A+++L++ +G ++K  LP KPW VKDT+Y+VN  +          +  HF+E+        RGLL++VL++IFC  D+ + E+ LF++LHD +D  +P     G   K+K RV       VDGLGDVH  L+ F KQHYL    VDK     G E +  Y +G R+ +E+G RQ+   +A  +   +D + L  L E E
Sbjct:  157 IEEKDQKKGNELSDLAKKDLIKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKFILTKADEKLQQGMGFKVKTPLPDKPWFVKDTFYVVNVLN----------NEQHFKEVLRGKGQAGRGLLVLVLSVIFCSSDKSVAENQLFKKLHDHVDERVPEKAWNGSNPKNKVRV------HVDGLGDVHEHLAMFTKQHYLLKKMVDKPTADGGTESIPHYSMGPRSVLEIGHRQLVELMAKVMGQSIDPSDLLGLEEQE 403          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: A0A7S3Q173_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q173_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.180e-23
Identity = 94/323 (29.10%), Postives = 148/323 (45.82%), Query Frame = 2
Query:  371 APTFNFTQESQEMWVGLHGTEGIVKGKEKDRASSLSETSLELLIGNMMRFLLMKGARREPITKVQMQKEVIGDD-----KKHRVFNVVLDEANQRLKRTLGLELKDTL------PGKPWSVKDTWYLVNA-RDIGAGANKESHSSAHFEELADNSEAPQRGLLMVVLALIFCQPDQK-----LTEDVLFRRLHDLDPNIPGP----------------TIGGGKAKSKGRVTARGAAEVDGLG---DVHALLSTFVKQHYL-----RVDKTETPEGEPLNRYQLGSRTYVEVGRRQISTFIADTLQVRVDATALQQLHEDERE 1216
            A TF+F+Q   E            +  EK    +L  T  E ++ ++ R +L K    E I + ++ KE    +     K  RV N  L+E  +RLK  +GL++K T        G P   K+  Y+VN+ +D G G +     S H      N  A ++GLLM++LA I+C+ + K     ++  VLFR LH +D NIP                  T G G+  S G   +  AA+   +    +V   L  F +  YL      +D ++T + + +  Y +G R Y+E+GR+Q+  + A  L+   D + L +L EDE E
Sbjct:    8 ASTFSFSQMEPEASQ----APPEARASEKSNLENLGTTK-EKVVTDLSRLVLFKAMSGETIDRTKLMKEAFPPESNPTLKDARVINAALNEVTERLKHVIGLDIKTTPNEILENKGMPKKFKERLYVVNSVKDDGVGTHSRELHSVH------NESAIEKGLLMLILAFIYCKGEVKDHMRWISAPVLFRLLHSVDENIPAEPASATTITKSGKKRESTSGSGR-NSIGAFASPSAAQGASMKFTPNVDEALEKFSQMDYLAKKKLELDGSQTQQDDTIYLYAMGPRAYLEIGRKQVLYYCAQVLEQEPDESMLAELKEDESE 318          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: A0A1Z5J752_FISSO (MAGE domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J752_FISSO)

HSP 1 Score: 110 bits (276), Expect = 5.070e-23
Identity = 90/271 (33.21%), Postives = 130/271 (47.97%), Query Frame = 2
Query:  440 VKGKEKDRASSLSETSLELLIGNMMRFLLMKGARREPITKVQMQKEVIGDDKKHRVFNVVLDEANQRLKRTLGLELK------DTLPGKPWSVKDTWYLVNARDIGAGANKESHSSAHFEELADNSE--APQRGLLMVVLALIFCQPDQK------LTEDVLFRRLHDLDPNIPGPTIGGGKAKSKGRVTARGAAEVDGLGDVHALLSTFVKQHYLRVDKTETPEGEPLNRYQLGSRTYVEVGRRQISTFIADTLQVRVDATALQQLHEDE 1210
            VK KE++  + L ET  E  + ++ R LL KG   E + +++  K+        R+ +   DEAN+RL+     ELK      + +   P S KD +YLVN         KE  +  H + L    E  A ++GLLMV+LAL +C+ + K      L +D L+  LH LD NIP     G     +G   AR  +  +    V A L  FV Q YL   K + P+   L  Y LG R  +E+GR+QI  F +  L    D + L +L +DE
Sbjct:   62 VKAKERENLNRLDETQREKALSDLTRLLLFKGLAGESLDRLKCAKDA---GLPPRITSAAFDEANKRLQNLFDFELKRIPVWMENMKDLPQSKKDRYYLVNCL-------KEDETGEHSKALHSVHEDCAIEKGLLMVILALCYCEGEPKTDGSRWLRDDRLYELLHRLDENIPNEPWRG-----EGSSPARSNSHPN----VDAALIKFVHQDYLLCIKEKDPD---LTMYCLGPRAAMEIGRKQILYFCSQILGQDPDPSMLLELEQDE 310          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: A0A7S2V1B1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1B1_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.280e-18
Identity = 82/285 (28.77%), Postives = 140/285 (49.12%), Query Frame = 2
Query:  443 KGKEKDRASSLSETSL-----------ELLIGNMMRFLLMKGARREPITKVQMQKEVIGDDKKHRVFNVVLDEANQRLKRTLGLELK---DTLPGKPWSVKDTWYLVNARDIGAGANKESHSSAHFEEL--ADNSEAPQR----GLLMVVLALIFCQPDQKLTEDVLFRRLHDLDPNIPGPTIGGGKAKSKGRVTARGAAEVDGLGDVHALLSTFVKQHYLRVDKTETPEGEPLNRYQLGSRTYVEVGRRQISTFIADTLQVRVDATALQQLHEDEREATGNNGG 1237
            +G E+D  S +S+  +           E L+ +M+R+L+MKGA++EPI   ++  +V+G  ++ R+  VVL EA  +++   G +L      + GK  S+KD++++VN  +             H +EL  AD+ +  Q+    GLLMVVLAL+  +  + + ++ L  +L  +D ++                T R    V G   +  +L TF +Q Y+  +      G  L ++++G R + EVG RQI  FI +T+   VD + +Q L        GNN G
Sbjct:   63 EGFEQDFVSKISDRDVGTFEALGMQEKERLVSDMVRYLIMKGAKKEPIKLDKLNDDVMGVYRQKRISRVVLAEARVQVRELFGFDLARAPQQMLGKQQSLKDSYFVVNRLE----------DPRHLQELGAADHDQGLQQASHPGLLMVVLALMVIEK-KPIPQNSLAEKLCSVDESL---------------ATDRRWKAVFGKS-LEGMLDTFKRQQYVNKEMETDANGVQLIKWKMGPRAHAEVGVRQIVQFIYETMDETVDPSVVQHLDN------GNNSG 314          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: A0A4D9D2F6_9STRA (MAGE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2F6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.160e-15
Identity = 88/299 (29.43%), Postives = 141/299 (47.16%), Query Frame = 2
Query:  380 FNFTQESQEMWVGLHGTEGI---VKGKEKDRASSLSETSLELLIGNMMRFLLMKGARREPITKVQMQKEVIGDDKKHRVFNVVLDEANQRLKRTLGLELKDTLPGKPW---SVKDTWYLVNARDIGAGANKESHSSAHFEELADNSEAPQRGLLMVVLALIFCQPDQKLTEDVLFRRLHDLDPN---IPGPTIGGGKAKSKGRVTARGAAEVDGLGDVHALLSTFVKQHYLRVDKTETPEGEPLNR----YQLGSRTYVEVGRRQISTFIADTLQVRVDATALQQLH-EDEREATGNNG 1234
            F+FTQ      +     +     ++ +++ +   LS+   ++ +   +R++L K ARREP+ + ++  EV+    K  V   VL  A ++L+   G  L  T P   +   + +DT+YL+ +          S S A     A   +   RG  M+V+ L+FC  + K+ E VLF++L +       +     GGG A+  G     GA  +DG+GD    L    K+ YL  D+ +        R    Y+LG R YVEVG RQI TF+A+     VD T L ++  E++R A G  G
Sbjct:  128 FSFTQTEDGPVINQREAQASQCEMRPQDEKQFHGLSQDQQKVAVSEAIRYILFKAARREPVHRQKLHDEVVKKYGKALV-RPVLKAAAEQLESIFGYTLV-TPPAYRFPRDADQDTYYLITS------IRSPSLSKAMN---AYGKDVGYRGFCMLVMGLVFCARN-KIPEQVLFKQLQEAQDGLEVVSKSQAGGGGAE--GGYAIHGA--LDGVGDAATALERMRKEQYLIRDREQVEVSGGSMRDEFSYRLGQRAYVEVGPRQILTFLAEAQGQDVDPTMLMEIETEEQRGARGERG 410          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: A0A1W0A5U3_9STRA (MAGE domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5U3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 5.970e-14
Identity = 72/274 (26.28%), Postives = 122/274 (44.53%), Query Frame = 2
Query:  383 NFTQES--QEMWVGLHGTEGIVKGKEKDRASSLSETSLELLIGNMMRFLLMKGARREPITKVQMQKEVIGDDKKHRVFNVVLDEANQRLKRTLGLE---LKDTLPGKPWSVKDTWYLVNARDIGAGANKESHSSAHFEELADNSEAPQRGLLMVVLALIFCQPDQKLTEDVLFRRLHDLDPNIPGPTIGGGKAKSKGRVTARGAAEVDGLGDVHALLSTFVKQHYLRVDKTETPEGEPLNRYQLGSRTYVEVGRRQISTFIADTLQVRVDATAL 1189
            +FTQ S  +E+   +   E   +G+   R + +S+ S+  L   ++R+LL K     P+    + KEV+  + K  +   +L  A+  L+   G +   + D +P      KD + ++N  +             H  ++        R LLMV+LA I+C P ++L E+ L ++L  +D +I   +I                 +   LGDV  L+  F  Q YL  D     +G+ +  Y  G+RTY EVG+ QI TF+   +  R+    L
Sbjct:   57 DFTQPSVPEEVSQRVPSMEAEEEGRVPPRVAQMSKKSISDLTARLVRYLLYKANANMPVKFADIGKEVLQREPK--IGRYILKLASAELESVFGYKAVAVDDIMPNVS-GKKDVFLIINTIE----------DQNHLLQVNKCYGKVNRALLMVILAFIWCAPSRRLVEEDLLKQLALVDKSILNTSI-----------------KHPQLGDVPLLIKAFESQMYLTSDSEIDGDGKRVKFYTYGARTYAEVGKVQILTFMCKLIHNRLPTEQL 300          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: T0PLY7_SAPDV (MAGE domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PLY7_SAPDV)

HSP 1 Score: 75.5 bits (184), Expect = 3.730e-11
Identity = 65/240 (27.08%), Postives = 106/240 (44.17%), Query Frame = 2
Query:  461 RASSLSETSLELLIGNMMRFLLMKGARREPITKVQMQKEVIGDDKKHRVFNVVLDEANQRLKRTLGLEL---KDTLPGKPWSVKDTWYLVNARDIGAGANKESHSSAHFEELADNSEAPQRGLLMVVLALIFCQPDQKLTEDVLFRRLHDLDPNIPGPTIGGGKAKSKGRVTARGAAEVDGLGDVHALLSTFVKQHYLRVDKTETPEGEPLNRYQLGSRTYVEVGRRQISTFIADTLQVR 1171
            R   LS+ ++  L   ++RFLL K     P+    + KE + ++ K  V    L  A+  L++  G ++    + LP      KD + +VNA              AH   +        RGLLM +LA I+C P ++L E+ L+++L  +D ++           + GR           LGDV   + TF  Q YL  D     +G+ +  +  G+R + EVG+ QI TF+   +  R
Sbjct:   80 RIGQLSKKTINDLTARVVRFLLYKAQANLPVRFADIGKEALPNESK--VSRYFLKLASAELEKVFGYKVVAVDEILPNGS-GKKDIYLIVNA----------IQDQAHLLHVNKAYGKVTRGLLMTILAFIWCAPSRRLVEEDLWKQLLLVDSSV---------TNTPGRHPQ--------LGDVQQHIKTFEAQMYLASDTEIDGDGKRIKFFTYGARAFAEVGKVQILTFMCKLIHNR 289          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: A0A7R9U441_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U441_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.280e-9
Identity = 72/265 (27.17%), Postives = 121/265 (45.66%), Query Frame = 2
Query:  470 SLSETSLELLIGNMMRFLLMKGARREPITKVQMQKEVIGDDKKHR-VFNVVLDEANQRLKRTLGLELKDTLPGKPW---SVKDTWYLVNA-RDIGAGANKESHSSAHFEELADNS----EAPQRGLLMVVLALIFCQPDQKLTEDVLFRRLHDLDPNI-PGPTIGGGKAKSKGRVTARGAAEVDGL---GDVHALLSTFV-----KQHYLRVDKTETPEGEPLNRYQLGSRTYVEVGRRQISTFIADTLQVRVDATALQQLHEDE 1210
            ++S    E L+GN++R+LLM+ +R+  IT+  +  +V+G  +  R + N +L  A++ L++  G ++   + G  W       T+YL N   ++G G   E  +  H  E+ + S       +RGLLMV LAL     +  + E +L  RL  +D +I PG +                    D L   GD++    T +     KQ Y  V + +   G   + Y++G R  VE+GR  I +F+       VD   L  +  +E
Sbjct:   94 TVSNDIREELLGNLVRYLLMRSSRKRQITRTDINNDVMGKFRGMRGLLNHLLLRADEYLRKVFGYQI---VVGS-WVDDKTSGTFYLYNTIAEVGEGV--EVAAMEHLAEVQNGSGQRAAVAERGLLMVTLALSLHGGNDGVAEQILIDRLRQIDSSIRPGNS--------------------DSLRMHGDINKAFKTLLNDWTTKQKYF-VKERKDFHGGLADFYRIGPRALVEIGRPSILSFVHGAQGHSVDQRTLDAIRTEE 331          
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Match: UPI0004D07B6E (melanoma-associated antigen B10-like n=1 Tax=Galeopterus variegatus TaxID=482537 RepID=UPI0004D07B6E)

HSP 1 Score: 65.9 bits (159), Expect = 7.620e-8
Identity = 61/217 (28.11%), Postives = 102/217 (47.00%), Query Frame = 2
Query:  509 MMRFLLMKGARREPITKVQMQKEVIGDDKKHRVFNVVLDEANQRLKRTLGLELKDTLPGKPWSVKDTWYLVNARDIGAGANKESHSSAHFEELADNSEAPQRGLLMVVLALIFCQPDQKLTEDVLFRRLHDLDPNIPGPTIGGGKAKSKGRVTARGAAEVDGLGDVHALLST-FVKQHYLRVDKTETPEGEPLN-RYQLGSRTYVEVGRRQISTFIA 1153
            +MR+LL K  ++EP+TK  M + VI  DKKH  F  +L   ++ L+   GL++K+  P +   V     LVN  ++   A            + DN+  P+ GLLM VLA+IF + + + TE+ +++ L     N+ G   G                E    G+   LL+   VK++YL  +  + P  +P +  +  G R Y E  + ++  F +
Sbjct:  119 LMRYLLSKYEKKEPVTKADMLRNVIKTDKKH--FPEILRRTSRNLELIFGLDMKEVDPNRSLYV-----LVNKLELSCDAR-----------VNDNTGLPKTGLLMTVLAVIFSKGN-RATEEHIWKLL-----NMMGVYCG---------------KEHFIFGEPRKLLTEDLVKENYL--EYRQVPNSDPPSFEFLWGPRAYAETSKMKVLEFFS 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8440.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LSU2_ECTSI1.350e-4236.12MAGE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KX60_9PHAE4.380e-4136.88MAGE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3Q173_9STRA1.180e-2329.10Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5J752_FISSO5.070e-2333.21MAGE domain-containing protein n=2 Tax=Fistulifera... [more]
A0A7S2V1B1_9STRA1.280e-1828.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D2F6_9STRA1.160e-1529.43MAGE domain-containing protein n=1 Tax=Nannochloro... [more]
A0A1W0A5U3_9STRA5.970e-1426.28MAGE domain-containing protein n=1 Tax=Thraustothe... [more]
T0PLY7_SAPDV3.730e-1127.08MAGE domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A7R9U441_9STRA1.280e-927.17Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI0004D07B6E7.620e-828.11melanoma-associated antigen B10-like n=1 Tax=Galeo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8440contigP-wetherbeei_contig8440:110..2800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSU2
PFAMsMAGE
Model size1975
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.21e-45
EggNOG OGs2E9QF@1|root,2SG1D@2759|Eukaryota
Ec32 ortholog descriptionMAGE homology domain
Ec32 orthologEc-15_002580.1
DescriptionMAGE family
Cds size1230
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187040.6324153-UTR-P-wetherbeei_contig8440:109..1611683187040.6324153-UTR-P-wetherbeei_contig8440:109..161Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8440 110..161 +
1683187040.6780834-UTR-P-wetherbeei_contig8440:2107..28001683187040.6780834-UTR-P-wetherbeei_contig8440:2107..2800Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8440 2108..2800 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187040.6451-CDS-P-wetherbeei_contig8440:161..9741683187040.6451-CDS-P-wetherbeei_contig8440:161..974Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8440 162..974 +
1683187040.6564667-CDS-P-wetherbeei_contig8440:1374..15561683187040.6564667-CDS-P-wetherbeei_contig8440:1374..1556Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8440 1375..1556 +
1683187040.6673589-CDS-P-wetherbeei_contig8440:1872..21071683187040.6673589-CDS-P-wetherbeei_contig8440:1872..2107Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8440 1873..2107 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8440.1.1prot_P-wetherbeei_contig8440.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8440 162..2107 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8440.1.1

>prot_P-wetherbeei_contig8440.1.1 ID=prot_P-wetherbeei_contig8440.1.1|Name=mRNA_P-wetherbeei_contig8440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=410bp
MSRRSSRSSSAAASRSVTNEESEPELELESGEEQEKRKKYKGKGKRPAYM
AAKSARRAPRVVGNNDNEDDDGEPEGTVGAGASDNDGGGDADSASAEGDA
DKDEDGAPTFNFTQESQEMWVGLHGTEGIVKGKEKDRASSLSETSLELLI
GNMMRFLLMKGARREPITKVQMQKEVIGDDKKHRVFNVVLDEANQRLKRT
LGLELKDTLPGKPWSVKDTWYLVNARDIGAGANKESHSSAHFEELADNSE
APQRGLLMVVLALIFCQPDQKLTEDVLFRRLHDLDPNIPGPTIGGGKAKS
KGRVTARGAAEVDGLGDVHALLSTFVKQHYLRVDKTETPEGEPLNRYQLG
SRTYVEVGRRQISTFIADTLQVRVDATALQQLHEDEREATGNNGGGGANS
GANEGDGDD*
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mRNA from alignment at P-wetherbeei_contig8440:110..2800+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8440.1.1 ID=mRNA_P-wetherbeei_contig8440.1.1|Name=mRNA_P-wetherbeei_contig8440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2691bp|location=Sequence derived from alignment at P-wetherbeei_contig8440:110..2800+ (Phaeothamnion wetherbeei SAG_119_79)
TCTTTATTTTATTTTTCTCCTCCAAGGAGGAAAAACCCGCAGCTCGGAAG CCATGTCGCGAAGATCGAGCCGCTCATCGTCTGCCGCGGCCTCGCGGTCA GTCACGAACGAGGAAAGCGAACCAGAGCTGGAGCTGGAGAGTGGGGAAGA GCAGGAGAAGCGAAAGAAGTACAAGGGGAAAGGCAAGCGCCCTGCCTACA TGGCAGCAAAGTCTGCAAGGAGGGCACCGAGGGTGGTGGGCAATAACGAC AATGAAGACGACGACGGCGAGCCCGAAGGCACAGTGGGCGCCGGTGCCAG CGACAACGACGGCGGCGGCGACGCGGATAGCGCCAGCGCCGAAGGCGACG CAGACAAGGACGAGGACGGAGCCCCTACCTTCAATTTCACGCAGGAGTCG CAGGAGATGTGGGTCGGGCTCCACGGGACGGAGGGCATCGTCAAGGGTAA GGAGAAGGATCGAGCATCCTCCCTGTCGGAGACGTCGCTCGAGCTGCTCA TCGGCAACATGATGCGGTTCCTCCTCATGAAGGGCGCGCGCCGCGAGCCC ATCACCAAGGTGCAGATGCAGAAGGAGGTCATCGGCGACGACAAGAAGCA CCGTGTCTTCAACGTCGTCCTGGACGAGGCCAACCAGCGCCTGAAGCGCA CCCTCGGCCTCGAGCTCAAAGACACGCTGCCGGGCAAGCCGTGGTCCGTC AAGGACACGTGGTACCTCGTCAACGCCCGCGACATCGGCGCCGGCGCAAA CAAGGAGAGCCACTCCTCGGCGCACTTCGAGGAGCTGGCCGACAACTCCG AGGCGCCGCAGCGGGGTCTCCTCATGGTGGTCCTCGCGCTCATCTTTTGC CAGCCCGACCAGAAGGTCCGTTTGGGGCTCGTTTGTCTCCTTTGGGTGGT TGATCTATTGGACTGCCTCGTCTTCGGTTTGGTTCGTGTGTCTTTTGAAC CCTGCTTGTAGGGCATCACTGCTCCCTCTAAATCGATATCCTGTTTTTGC CATCTGGAGCCTGCGCGCTTCACCAATGCTTTGCATTTTGGCCGTGGGTT GTGCCTGGGACCGCTACCACCTCCATATCCCACTGTTTTGCTTGTGAACA ACGTTTCGTTTAAATAAACGTCGTGCATTATTTCCAACACTCTGGCGCCG GCTAGAGTGCCACTTCGATTTCCACTTCCCTTCCCCCCCGCCGGCGCTAT TCTCTCCGCTCGCATCCCTAAAACCTCCGTCCGTCCCGCCCTCCCGCCCA CCCGCCGGCCTCCAGCTGACGGAAGACGTGCTGTTCCGACGCCTCCATGA CCTGGACCCCAACATTCCCGGGCCGACCATTGGTGGCGGCAAGGCAAAGA GCAAGGGCCGCGTCACCGCCCGCGGTGCCGCCGAAGTGGACGGACTGGGG GACGTCCACGCGTTGCTCTCCACTTTCGTCAAGCAACATTACCTGCGGTG AGTGTCGGTGTTTCCGCTCCAGTTCCTGGCGGCTCATTTGCTCTGTCAGT GGCCGCTTTTTCAAATTTCACACATTTGATACACGGAGGGGTCTTTTGAA TCGCTCGGGGAACTCGGATCAGCAGTTTGCTGCTTTCGAACTCTTTTTCT GGCCTGCGACTTTGCACGTGTATCCCTCACAGCTTGGCCTTTTCTCCTCC TGTTCCCAAAACATTGGCGACGGCGACGGCGACGGGGGCCTACAAACGAC ACTGCAAACCAATGGGCTCCCGCTTCTTCTGCCTGCCTGCCGGCCGCCGT CCGACGGGCGCAGCGTGGACAAGACAGAGACCCCCGAGGGGGAGCCGCTG AACCGCTACCAGCTGGGGTCCCGCACCTACGTCGAGGTGGGGCGGCGTCA GATTTCCACATTCATCGCCGACACGCTCCAGGTGCGCGTTGACGCGACGG CGCTGCAGCAGCTACACGAGGACGAGCGGGAGGCAACCGGCAACAATGGT GGCGGCGGTGCCAACAGCGGCGCCAACGAGGGCGACGGCGACGACTGAGC TGAGCCGCTCTGTCAGTGGCTATAGTTTGCCGGTGACGGGTGCGGCTAAG GTCCGCCGGCGGTGGGTGCGGCTATGGTCTCCCCGGCAGCTAGAGCTCGC AGCTACAGCTCGCCGGCGGCGGCTAGAATTCGCCGTAGGCGGCTTGACCT TGGCTGCCCCGGGAGATAGCTGCGTCAGACGGGCGGGTGAGCGGAGCGGA GCAGTCGGCGGCGGGCCGGAAGGACCAGAGAGCTGTGCCACTGGCAGGGG TCGGCGGGCGGAGAGTCGATTCCTTATGGCGAGATTCGGGTACCAACGCC GCCGAGGAATAACCGGCGGCGCCAACGACTAATCTCGAGGTCGTCCAATG AGGAGCCGGTTTGCGCCCTGCTGATCGGTGTTCCGGCGGCACGGCTCCGG ATTCCTGTCGTCGCTCCTGAAAAGGGCATTGTCCCTGGGGAAAAATGAAA GAGTTTCTTGGGCAAGGGTGGGTGGGAAGCAGGAAGCGGATTGGTTCCTC TGAAAAAGGTGTGAAAGCGAGGTGAAGCGAAATTGAGGAATCGGTGCAAG TGTGGAACGCCGTCACCTATGGGCGTGAGCTTTCATCAGGTTAGCATCGT GCAGGCGCAAAAGAAGCACCACGTGCGGCCAGCGAGTGGGCCTTTTTGTT CAACTGACGAGAAAATGTTGCGCATAGCCCGTATTACACGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8440:110..2800+

>mRNA_P-wetherbeei_contig8440.1.1 ID=mRNA_P-wetherbeei_contig8440.1.1|Name=mRNA_P-wetherbeei_contig8440.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1230bp|location=Sequence derived from alignment at P-wetherbeei_contig8440:110..2800+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCGAAGATCGAGCCGCTCATCGTCTGCCGCGGCCTCGCGGTCAGT
CACGAACGAGGAAAGCGAACCAGAGCTGGAGCTGGAGAGTGGGGAAGAGC
AGGAGAAGCGAAAGAAGTACAAGGGGAAAGGCAAGCGCCCTGCCTACATG
GCAGCAAAGTCTGCAAGGAGGGCACCGAGGGTGGTGGGCAATAACGACAA
TGAAGACGACGACGGCGAGCCCGAAGGCACAGTGGGCGCCGGTGCCAGCG
ACAACGACGGCGGCGGCGACGCGGATAGCGCCAGCGCCGAAGGCGACGCA
GACAAGGACGAGGACGGAGCCCCTACCTTCAATTTCACGCAGGAGTCGCA
GGAGATGTGGGTCGGGCTCCACGGGACGGAGGGCATCGTCAAGGGTAAGG
AGAAGGATCGAGCATCCTCCCTGTCGGAGACGTCGCTCGAGCTGCTCATC
GGCAACATGATGCGGTTCCTCCTCATGAAGGGCGCGCGCCGCGAGCCCAT
CACCAAGGTGCAGATGCAGAAGGAGGTCATCGGCGACGACAAGAAGCACC
GTGTCTTCAACGTCGTCCTGGACGAGGCCAACCAGCGCCTGAAGCGCACC
CTCGGCCTCGAGCTCAAAGACACGCTGCCGGGCAAGCCGTGGTCCGTCAA
GGACACGTGGTACCTCGTCAACGCCCGCGACATCGGCGCCGGCGCAAACA
AGGAGAGCCACTCCTCGGCGCACTTCGAGGAGCTGGCCGACAACTCCGAG
GCGCCGCAGCGGGGTCTCCTCATGGTGGTCCTCGCGCTCATCTTTTGCCA
GCCCGACCAGAAGCTGACGGAAGACGTGCTGTTCCGACGCCTCCATGACC
TGGACCCCAACATTCCCGGGCCGACCATTGGTGGCGGCAAGGCAAAGAGC
AAGGGCCGCGTCACCGCCCGCGGTGCCGCCGAAGTGGACGGACTGGGGGA
CGTCCACGCGTTGCTCTCCACTTTCGTCAAGCAACATTACCTGCGCGTGG
ACAAGACAGAGACCCCCGAGGGGGAGCCGCTGAACCGCTACCAGCTGGGG
TCCCGCACCTACGTCGAGGTGGGGCGGCGTCAGATTTCCACATTCATCGC
CGACACGCTCCAGGTGCGCGTTGACGCGACGGCGCTGCAGCAGCTACACG
AGGACGAGCGGGAGGCAACCGGCAACAATGGTGGCGGCGGTGCCAACAGC
GGCGCCAACGAGGGCGACGGCGACGACTGA
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