mRNA_P-wetherbeei_contig8439.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8439.1.1
Unique NamemRNA_P-wetherbeei_contig8439.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: A0A836C9V4_9STRA (Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9V4_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 8.330e-146
Identity = 220/345 (63.77%), Postives = 259/345 (75.07%), Query Frame = 1
Query:   28 LADVSKFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVMEELKKKARTRGLWNLFFPGS-----GLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            L  +  FVE+E IPAE+V E +      R  SR++E   VME+LK +AR  GLWNLF P       G+S+ QYAA+SE++GRS +APEACNC+APDTGNMEVL +YG+ AQ+  WL  LLEG IRSAFLMTEPE ASSDATNIAC      D YVVTGRKWW+TGA DPRCRL +V+ RM G     A+WD RP+H RH++LLVP  SPG  + R L VFGYDDAPHGHAEV LRGV V A +A++LGEGRGFE+AQ RLGPGRVHHCMRA+G+AERAL A VRRS  R AFGRPL +HD VR ++A SRME+DQAR LVL CAR+L    G KGA+ EV+MIKV
Sbjct:   13 LRTLEAFVEDECIPAERVKEIKA-----RTGSRWSEVPAVMEQLKLRARALGLWNLFMPPGHPGTQGVSVSQYAALSEVMGRSTIAPEACNCSAPDTGNMEVLAQYGSAAQQAAWLPDLLEGRIRSAFLMTEPETASSDATNIACRIRRFGDKYVVTGRKWWSTGAMDPRCRLFIVMGRMEG-----AEWDARPIHQRHTMLLVPARSPGVTLERALEVFGYDDAPHGHAEVTLRGVEVSADAALLLGEGRGFEIAQGRLGPGRVHHCMRALGLAERALTALVRRSRERIAFGRPLCDHDMVRRSIADSRMELDQARHLVLDCARKLERSGGAKGAMMEVAMIKV 347          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: D7FRX3_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRX3_ECTSI)

HSP 1 Score: 407 bits (1045), Expect = 6.170e-138
Identity = 209/345 (60.58%), Postives = 257/345 (74.49%), Query Frame = 1
Query:   28 LADVSKFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVMEELKKKARTRGLWNLFFP-----GSGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            LA + +FVE+E IPAE VF  ++ +   R  +R+ E   V+  LK KAR+ GLWNLF P      + + +++YA +SE++GRS +APEACNC+APDTGNMEV   YG+P  K  WL PLLEG IRSAFLMTEP VASSDATNIAC    + D YV+ GRKWW++GA DPRC++A+V+ R       GA+WD +  HGRHS+++VP D+PG  ++R L VFGYDDAPHGHAEV LR VRVP +S ++LGEGRGFE+AQ RLGPGRVHHCMRA+GMAERAL A V+RS  R AFG+ L+E   VR  VA SRMEIDQ+RLLV  CA +L E  GL+GAIQEVSMIKV
Sbjct:    5 LALLERFVEDECIPAEPVFTQEMAEIEARTGTRWEEVPAVLSRLKAKARSLGLWNLFMPKGHEGSANVPMQEYAQMSELMGRSSIAPEACNCSAPDTGNMEVFANYGSPEHKATWLTPLLEGKIRSAFLMTEPAVASSDATNIACDVHREGDMYVINGRKWWSSGAMDPRCKVAIVMCRH-----GGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSS-ILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKALSEDSLVRHHVAQSRMEIDQSRLLVQDCAAKL-EAFGLQGAIQEVSMIKV 342          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: A0A0K1PZJ7_9DELT (Acyl-CoA dehydrogenase n=1 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1PZJ7_9DELT)

HSP 1 Score: 383 bits (983), Expect = 1.540e-128
Identity = 205/351 (58.40%), Postives = 248/351 (70.66%), Query Frame = 1
Query:    7 SAQFKKLLADVSKFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVMEELKKKARTRGLWNLFFP----GSGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            SA+ + L   V+ FV E  IPAE  FE  + ++  R S       PVMEELK KAR  GLWNLF P    G+GL+  +YA + EI+GRS +APE  NCNAPDTGNMEVL +YGT AQKK WLEPLL GTIRS F MTEPEVASSDATNIACS   D DSYV+ GRKWW +GA DPRC++A+V+         G      P H + S++LVP D+PG  V+RPL+VFGYDDAPHGHAEV    VRVP ++ ++LGEGRGFE+AQ RLGPGR+HHCMRAIG+AERALEA  +R   R AFGRPLAE   +R  +A SR+EID+ARLL L  A  + +  G K A +E++MIK+
Sbjct:    9 SARAEDLKHRVAAFVNEHVIPAEPAFERHLAESGNRWS-----IPPVMEELKAKARREGLWNLFLPDHGGGAGLTNLEYAPLCEIMGRSPIAPEVFNCNAPDTGNMEVLVRYGTDAQKKAWLEPLLAGTIRSCFAMTEPEVASSDATNIACSIRGDGDSYVIHGRKWWTSGAMDPRCKIAIVM---------GKTDPDAPRHLQQSMVLVPLDTPGVRVVRPLTVFGYDDAPHGHAEVAFENVRVPKSN-ILLGEGRGFEIAQGRLGPGRIHHCMRAIGLAERALEAMCKRVQERVAFGRPLAEQGALRHEIARSRIEIDEARLLTLNAAHTM-DVHGNKAAKKEIAMIKI 343          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: A0A1M3MZ52_9DELT (Acyl-CoA dehydrogenase n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3MZ52_9DELT)

HSP 1 Score: 370 bits (951), Expect = 1.400e-123
Identity = 202/358 (56.42%), Postives = 245/358 (68.44%), Query Frame = 1
Query:    7 SAQFKKLLADVSKFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVMEELKKKARTRGLWNLFFP-----------GSGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            S + K L   V+ FV E   PAE VFE Q+ +A  R +       P+MEELK+KAR  GLWNLF P           G+GL+  +YA + EI+G S +APE  NCNAPDTGNMEVL +YGT AQKKQWLEPLL G IRS F MTEPEVASSDATNIACS   D DSYV+ GRKWW +GA DPRC++A+++         G      P H + S++LVP D+PG EV R L+VFGYDDAPHGHAEV   GVRVP A+ ++LGEGRGFE+AQ RLGPGR+HHCMR IG+AERAL    +R+  R AFG+PLAE   +R  +A SR+EIDQARLL L  A  + +  G K A + ++MIKV
Sbjct:    9 SERAKDLEKRVAAFVAEHVYPAEAVFERQLSEAKTRWA-----VPPIMEELKRKARAAGLWNLFLPHHEGGAISEQMGAGLTNLEYAPLCEIMGGSPIAPEVFNCNAPDTGNMEVLARYGTDAQKKQWLEPLLAGEIRSCFAMTEPEVASSDATNIACSIRSDGDSYVIDGRKWWTSGALDPRCKIAILM---------GKTDPSAPRHAQQSMVLVPMDTPGVEVHRALTVFGYDDAPHGHAEVSFTGVRVPKAN-ILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALAFMCKRARERVAFGKPLAEQGALRHEIARSRIEIDQARLLTLDAAHTM-DVHGNKVAKKAIAMIKV 350          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: UPI001E4021E5 (acyl-CoA dehydrogenase family protein n=4 Tax=Skermanella TaxID=204447 RepID=UPI001E4021E5)

HSP 1 Score: 369 bits (947), Expect = 3.340e-123
Identity = 187/306 (61.11%), Postives = 228/306 (74.51%), Query Frame = 1
Query:  142 PVMEELKKKARTRGLWNLFFP----GSGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            P++EELK KAR  GLWNLF P    G+GLS   YA + EI+GRSF+APE  NC+APDTGNMEVL +YGTP QK++WL+PLL G IRS F MTEPEVASSDATNI C  E D D YVV GRKWW++GA DPRCR+A+++         G      P H + S++LVP D+PG EV+RPL+VFGYDDAPHGHAEV    VRVPA++ ++LGEGRGFE+AQ RLGPGR+HHCMR IG AERALEA   R+ AR AFG+PLA+   +R  +A SR+EI+QARLLV+  AR++ +  G K A   +SMIKV
Sbjct:   48 PIVEELKAKAREEGLWNLFLPDSEMGAGLSNSDYAPLCEIMGRSFMAPEIFNCSAPDTGNMEVLVRYGTPEQKERWLKPLLAGEIRSCFAMTEPEVASSDATNIECRIERDGDHYVVNGRKWWSSGANDPRCRIAILM---------GKTDPSAPKHRQQSMILVPFDTPGVEVVRPLTVFGYDDAPHGHAEVTYTDVRVPASN-ILLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALEAMCARAHARVAFGKPLAQQGALRQEIARSRIEIEQARLLVMEAARQM-DTVGNKAARGLISMIKV 342          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: A0A848Z5R1_9PROT (Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z5R1_9PROT)

HSP 1 Score: 364 bits (935), Expect = 5.430e-122
Identity = 200/353 (56.66%), Postives = 241/353 (68.27%), Query Frame = 1
Query:    7 SAQFKKLLADVSKFVEEEAIPAEKVFETQVEDAARRHSS--RFAEYAPVMEELKKKARTRGLWNLFFP----GSGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            S   + L A + +F+++   PAE V+       A +H +  R+A   PV+EELK KAR  GLWNLF P    G+GLS   YA + EI+GRS +APE  NCNAPDTGNMEVL +YGT AQK  WLEPLL G IRS F MTEP VASSDATNI C    D D YVV G KWW TGA DPRCR+A+V+         G      P H + S++LVP D+PG E++RPL+V+GYDDAPHGHAE+    VRVPA + ++LGEGRGFE+AQ RLGPGR+HHCMR IG+AERALEA   R   R AFGRPLAE  G+R  +A SR+EIDQARLL L  A R+ +  G K A  E++MIKV
Sbjct:    5 SQHVQDLTARLVRFMDKHVTPAEAVY-------AEQHGAGERWA-IPPVIEELKAKARAEGLWNLFLPDSENGAGLSNLDYAPLCEIMGRSPIAPEVFNCNAPDTGNMEVLVRYGTEAQKSAWLEPLLAGAIRSCFAMTEPAVASSDATNIECRIVRDGDHYVVDGHKWWITGAPDPRCRIAIVM---------GKTDPSAPRHLQQSMILVPMDAPGVEIVRPLTVYGYDDAPHGHAELRFSNVRVPADN-ILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALEAMCARVRDRVAFGRPLAEQGGIRQDIARSRIEIDQARLLTLNAAERM-DAVGNKAARAEIAMIKV 338          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: W7UAJ9_9STRA (Acyl-dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAJ9_9STRA)

HSP 1 Score: 366 bits (939), Expect = 1.490e-121
Identity = 196/352 (55.68%), Postives = 248/352 (70.45%), Query Frame = 1
Query:    7 SAQFKKLLADVSKFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVMEELKKKARTRGLWNLFFPG-----SGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            S   K L A ++ FV+EE +PAE V+E Q  +     SSR+     ++E LK KAR  GLWNLF        SGL++ +YA +SE++GRSFLAPEACNCNAPDTGNMEVL KYG   Q+ QWL PL+EG+IRS FLMTEP VASSDATNIA S   + D YVV GRKWW++GA DPRC++A+VL ++     + A     P H +HS+L+VP  +PG +VLR LSVFG+DDAPHGHAEV L  VRVP ++ ++LGEG GF++AQ RLGPGR+HHCMRAIG++ER L  A  R+  R AFG+ +A    V+  +A  R+ +DQARLLVL  A R+    G KGA QE++MIKV
Sbjct:    6 SPHAKTLYAKLTAFVDEECLPAEVVYERQHAEL----SSRWM-IPEIIETLKGKARKLGLWNLFMMERDVYHSGLNMVEYAVLSEVMGRSFLAPEACNCNAPDTGNMEVLAKYGNARQQAQWLNPLMEGSIRSTFLMTEPGVASSDATNIATSFRREGDEYVVNGRKWWSSGAMDPRCQVALVLGKVDSPVTAAA-----PRHRQHSILIVPMATPGVKVLRALSVFGFDDAPHGHAEVELAEVRVPVSN-LILGEGDGFKIAQGRLGPGRIHHCMRAIGLSERVLALATMRALTRRAFGKEIARQGAVQRDLAQCRISVDQARLLVLHAAWRMDTNKGAKGAQQEIAMIKV 346          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: A0A379KMM4_PSEPU (Acyl-CoA dehydrogenase n=45 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A379KMM4_PSEPU)

HSP 1 Score: 362 bits (930), Expect = 1.520e-120
Identity = 195/351 (55.56%), Postives = 242/351 (68.95%), Query Frame = 1
Query:    7 SAQFKKLLADVSKFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVMEELKKKARTRGLWNLFFP----GSGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            S + + L   V+ F++    PAE VFE QV +  R   +       +MEELK KAR  GLWNLF P    G+GLS  +YA ++EI+GRS L PE  NC+APDTGNMEVL +YG+ AQK+QWLEPLL G IRSAF MTEP+VASSDATN+A +A  D D +V+ GRKWW +GA DPRC++ + +         G      P H +HS++LVPTD+ G +++RPL VFGYDDAPHGHAEV+   VRVP  + V+LGEGRGFE+AQ RLGPGR+HHCMR++GMAERALE   RRS  RTAFGRPLA   G    +A SRMEID ARLL L+ A  + +  G K A  E++ IKV
Sbjct:    6 SPKVQALRERVTAFMDAHVYPAEPVFERQVAEGDRWQPT------AIMEELKAKARAEGLWNLFLPESQYGAGLSNLEYAPLAEIMGRSLLGPEPFNCSAPDTGNMEVLVRYGSEAQKRQWLEPLLRGEIRSAFAMTEPDVASSDATNMAATAVRDGDEWVINGRKWWTSGACDPRCKVMIFM---------GLSNPDGPRHQQHSMVLVPTDAAGVKIVRPLPVFGYDDAPHGHAEVLFENVRVPYEN-VILGEGRGFEIAQGRLGPGRIHHCMRSVGMAERALELMCRRSVERTAFGRPLARLGGNVDKIADSRMEIDMARLLTLKAAYMM-DTVGNKVARSEIAQIKV 339          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: A0A0P7XTY8_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Saliniramus fredricksonii TaxID=1653334 RepID=A0A0P7XTY8_9HYPH)

HSP 1 Score: 362 bits (928), Expect = 3.260e-120
Identity = 191/351 (54.42%), Postives = 243/351 (69.23%), Query Frame = 1
Query:    7 SAQFKKLLADVSKFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVMEELKKKARTRGLWNLFFPG----SGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            SA+  +L   V  F+EE   PAE VFE Q++ A+ R S+      P+MEELK KA+ +GLWNLF P       L+  +YA + E++GRS + PE  NC+APDTGNME + +YGTP QKK WLEPLLEG IRS F MTEP+VASSDATNI      D D Y++ GRKWW +GA DPRCR+A+++ +         D D    H + S++LVP D+PG  V R L+VFGYDDAPHGHAEV    VRVPA++ ++LGEGRGFE+AQ RLGPGR+HHCMRAIG+AERALE  ++R+ +R  FGR +A+H   R  +A SRMEIDQARLL L  A+ + +  G K A  E++MIKV
Sbjct:    8 SARAHELRERVIAFMEEHIYPAESVFEEQLDAASSRWSA-----PPIMEELKAKAKAKGLWNLFLPRREYPDSLTNYEYAHICEVMGRSPIGPEPFNCSAPDTGNMETIARYGTPEQKKAWLEPLLEGEIRSCFAMTEPDVASSDATNIRTLISRDGDDYIINGRKWWTSGAMDPRCRIAILMGKT--------DPDAEK-HKQQSMILVPMDTPGVTVERALTVFGYDDAPHGHAEVTFDNVRVPASN-ILLGEGRGFEIAQGRLGPGRIHHCMRAIGVAERALETMIKRALSRETFGRAIADHGVTRHWIAESRMEIDQARLLTLHAAKMM-DAVGNKAARAEIAMIKV 342          
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Match: I3TI97_TISMK (Putative acyl-CoA dehydrogenase n=6 Tax=Tistrella TaxID=171436 RepID=I3TI97_TISMK)

HSP 1 Score: 361 bits (927), Expect = 3.560e-120
Identity = 192/339 (56.64%), Postives = 237/339 (69.91%), Query Frame = 1
Query:   43 KFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVMEELKKKARTRGLWNLFFP----GSGLSIEQYAAVSEILGRSFLAPEACNCNAPDTGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACSAELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVHGRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVVLGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPLAEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV 1047
            +F++    PAE VFE Q   +  R  +      P++EELK KAR  GLWNLF P    G+GL+   YA + E++GRS +APE  NCNAPDTGNMEVLE+YGT   K+QWLEPLL+G IRSAF MTEP VASSDATNI    E D D YV+ GRKWW +GA DPRC++ + + + R        +DG P H + S++LVP D+PG  VLRPL VFGYDDAPHGHAEV+   VRVP  + ++LGEGRGFE+AQ RLGPGR+HHCMR IG+AERALE+  +R+  RTAFG+ LAEH   R  +A SRMEIDQARLL L+ A  + +  G K A  E++ IKV
Sbjct:   18 EFMDAYVYPAEAVFEEQHRASPDRWVT-----PPIIEELKAKARAAGLWNLFLPHSERGAGLNNLDYAPLCEVMGRSEIAPEVFNCNAPDTGNMEVLERYGTEEHKRQWLEPLLDGKIRSAFAMTEPMVASSDATNIESRIERDGDDYVINGRKWWTSGAPDPRCKILIFMGKTR--------FDG-PRHSQQSMVLVPMDTPGVTVLRPLKVFGYDDAPHGHAEVLFENVRVPVEN-ILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALESMCKRAQQRTAFGKTLAEHGMTRHYIAQSRMEIDQARLLTLKAAWMM-DTVGNKNAKSEIAAIKV 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8439.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9V4_9STRA8.330e-14663.77Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus Tax... [more]
D7FRX3_ECTSI6.170e-13860.58Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A0K1PZJ7_9DELT1.540e-12858.40Acyl-CoA dehydrogenase n=1 Tax=Labilithrix luteola... [more]
A0A1M3MZ52_9DELT1.400e-12356.42Acyl-CoA dehydrogenase n=1 Tax=Myxococcales bacter... [more]
UPI001E4021E53.340e-12361.11acyl-CoA dehydrogenase family protein n=4 Tax=Sker... [more]
A0A848Z5R1_9PROT5.430e-12256.66Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Inquilin... [more]
W7UAJ9_9STRA1.490e-12155.68Acyl-dehydrogenase n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A379KMM4_PSEPU1.520e-12055.56Acyl-CoA dehydrogenase n=45 Tax=Pseudomonadaceae T... [more]
A0A0P7XTY8_9HYPH3.260e-12054.42Acyl-CoA dehydrogenase n=1 Tax=Saliniramus fredric... [more]
I3TI97_TISMK3.560e-12056.64Putative acyl-CoA dehydrogenase n=6 Tax=Tistrella ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8439contigP-wetherbeei_contig8439:660..2756 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FRX3
Preferred nameACAD11
PFAMsAPH,Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size1047
Max annot lvl2759|Eukaryota
KEGG rclassRC00005,RC00028,RC00052,RC00068,RC00076,RC00095,RC00148,RC00246,RC02748
KEGG koko:K00249,ko:K00695,ko:K11729,ko:K11730,ko:K15501,ko:K19360
KEGG ReactionR00806,R00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754
KEGG Pathwayko00071,ko00280,ko00410,ko00500,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00500,map00640,map01100,map01110,map01130,map01200,map01212,map03320
KEGG ModuleM00013,M00036,M00087
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003995,GO:0004466,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005777,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0010054,GO:0016020,GO:0016042,GO:0016049,GO:0016054,GO:0016491,GO:0016627,GO:0017099,GO:0019395,GO:0019752,GO:0019866,GO:0021700,GO:0022622,GO:0030154,GO:0030258,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0040007,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0048037,GO:0048364,GO:0048468,GO:0048469,GO:0048588,GO:0048589,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0050660,GO:0050662,GO:0055114,GO:0060560,GO:0070991,GO:0071695,GO:0071704,GO:0072329,GO:0080147,GO:0090558,GO:0090627,GO:0097159,GO:0099402,GO:1901265,GO:1901363,GO:1901575,GO:1905392
Exons5
Evalue1.01e-138
EggNOG OGsCOG3173@1|root,KOG1469@2759|Eukaryota
EC1.3.8.7,2.4.1.13
Descriptionvery-long-chain-acyl-CoA dehydrogenase activity
Cds size1047
COG categoryC
CAZyGT4
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko01009,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187040.3935857-CDS-P-wetherbeei_contig8439:659..9741683187040.3935857-CDS-P-wetherbeei_contig8439:659..974Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8439 660..974 +
1683187040.4097078-CDS-P-wetherbeei_contig8439:1290..13511683187040.4097078-CDS-P-wetherbeei_contig8439:1290..1351Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8439 1291..1351 +
1683187040.419007-CDS-P-wetherbeei_contig8439:1593..16341683187040.419007-CDS-P-wetherbeei_contig8439:1593..1634Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8439 1594..1634 +
1683187040.427704-CDS-P-wetherbeei_contig8439:1926..23131683187040.427704-CDS-P-wetherbeei_contig8439:1926..2313Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8439 1927..2313 +
1683187040.4366937-CDS-P-wetherbeei_contig8439:2513..27561683187040.4366937-CDS-P-wetherbeei_contig8439:2513..2756Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8439 2514..2756 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8439.1.1prot_P-wetherbeei_contig8439.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8439 660..2756 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8439.1.1

>prot_P-wetherbeei_contig8439.1.1 ID=prot_P-wetherbeei_contig8439.1.1|Name=mRNA_P-wetherbeei_contig8439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=349bp
MPSAQFKKLLADVSKFVEEEAIPAEKVFETQVEDAARRHSSRFAEYAPVM
EELKKKARTRGLWNLFFPGSGLSIEQYAAVSEILGRSFLAPEACNCNAPD
TGNMEVLEKYGTPAQKKQWLEPLLEGTIRSAFLMTEPEVASSDATNIACS
AELDNDSYVVTGRKWWATGAQDPRCRLAVVLVRMRGREASGADWDGRPVH
GRHSVLLVPTDSPGFEVLRPLSVFGYDDAPHGHAEVVLRGVRVPAASAVV
LGEGRGFEVAQSRLGPGRVHHCMRAIGMAERALEAAVRRSFARTAFGRPL
AEHDGVRSAVAHSRMEIDQARLLVLRCARRLGEPAGLKGAIQEVSMIKV
back to top

mRNA from alignment at P-wetherbeei_contig8439:660..2756+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8439.1.1 ID=mRNA_P-wetherbeei_contig8439.1.1|Name=mRNA_P-wetherbeei_contig8439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2097bp|location=Sequence derived from alignment at P-wetherbeei_contig8439:660..2756+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCTCGGCACAGTTCAAAAAGCTGCTCGCGGATGTCTCTAAATTCGT AGAAGAAGAGGCAATTCCGGCAGAAAAGGTCTTTGAGACCCAGGTAGAAG ACGCAGCGCGAAGGCACAGCTCACGCTTCGCAGAATACGCGCCTGTCATG GAGGAGCTCAAAAAGAAGGCGAGGACAAGAGGATTGTGGAACCTCTTCTT TCCCGGCAGCGGACTGTCAATCGAGCAGTATGCTGCAGTGAGCGAGATTC TCGGCCGATCCTTCTTGGCTCCCGAAGCGTGCAACTGCAACGCGCCAGAT ACGGGCAATATGGAGGTAAACTTAGTTGCATCCTTGCGAAATCAGTACGA GGAGATGGTAAAAATCTCTAGTGTCGCCGCCCGAGTCTCGCGAGTACGTG AAAGGACTTCTTGCGATGCTGTCCTAAGCAGTCTTGCATGTGACCTAGCG AAAGACCGATTGAAGGCTCCCTCTTTGGTTCAGTGGACCCATGGAACGGG ATGTCTTTGACATGATCGTGCTCCTCTCCTCAGGGACGCTGTGTTCGTTG CTTCCAGCTGCGAGTTCCCTTCTTCAACGCTTGAACGAGGCCTGCCGCCA TCGTCGCTTTCTTCCGCTTTCGCGACAAAAGGTGCTGGAAAAATACGGCA CACCTGCTCAAAAGAAGCAGTGGCTCGAACCACTTCTAGAAGGTGAGACA GGGAGCCGTTCTGCGCTAGTCATCCGCCCTCTGTACTATGGATGCGGTTT AATGCCAAAAATTTACAAAGAAACGAGGAAAATGAAGGGCTGCAGCCCGG CTCTTTGAGAAGTTTTGTATTTGGTGTAGTCATGGCGTTCTCTGCCCGAC ATATACTCATTTGCTCGAACCTTCTTTTTTTCCTCGACTGCATTGCTCGG CTGCGGCGCATCTGGATGGTCGCACTCCATTCAGGCACAATACGGAGCGC TTTTCTGATGACAGAGCCAGAAGTGGTGAGAAAAAAGAAAACTCTCTTAG GACGTCCCACTGTCTCATGAGACGATATTTGTGGAAGACTTCAGTAGCAT GCGTCCATCGGAACACTACTCCTTTACTTTTCTGTGCGTCATTCTTGCTG CGTCTTTTGGCCGACTCTTTGCCGCGCCTTTTTGCCCTTGCTATCGACCG ACGCCATTTTTGTTTTTTCCCTTCTGTTCTGTTCTCTCCCTCGCCTCACC TGCGGCGTTCTGTTCCTTCGCAACCCCACCAAACTTTTTGCTGGCGGCGG CCGGCCGCCCGCGTCAGGCGAGTTCCGATGCCACAAACATTGCCTGCTCG GCGGAGCTCGACAACGATTCCTATGTTGTCACCGGGCGGAAGTGGTGGGC GACGGGGGCGCAGGACCCGCGCTGCCGCCTGGCGGTCGTCCTGGTCCGCA TGCGGGGCCGCGAAGCGTCCGGCGCGGATTGGGACGGACGCCCGGTGCAC GGACGGCACAGCGTCCTGTTGGTGCCGACAGACTCCCCCGGATTCGAAGT GCTGCGGCCGCTGAGCGTCTTCGGCTACGACGACGCGCCGCATGGTCACG CCGAGGTGGTGCTGCGCGGAGTCCGCGTCCCGGCAGCGTCCGCCGTCGTC CTCGGGGAGGGCCGCGGCTTCGAGGTTGCGCAGAGTCGCCTTGGGCCCGG GAGGGTGCGTTTTTGTGTTCTTGCATGGCTTGATATTTTCAAACTGTCGT TGGACTTTACGCTGTTTGGGCAGGATTGAAATGACGGCGGCGGCGGTGGC GACGGAGTTTTGGGTGGCGGCTGGACCGGCGGTGTGAACATTTCTCCGGT CTTTCTCAAGTCCCAACACCACTCGGCTCCGGCCTTGTCTATCGGTATTG CCAGGTGCACCACTGCATGCGGGCCATCGGGATGGCGGAGCGGGCGCTCG AGGCGGCGGTGCGGCGCAGCTTCGCCCGCACGGCCTTTGGACGGCCGCTC GCAGAGCACGACGGCGTGCGGAGCGCCGTGGCGCACAGCCGCATGGAGAT CGACCAGGCACGCCTGCTGGTGCTGCGGTGCGCGCGGCGGCTCGGGGAGC CCGCCGGGCTGAAAGGCGCCATCCAGGAGGTCTCCATGATCAAGGTG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig8439:660..2756+

>mRNA_P-wetherbeei_contig8439.1.1 ID=mRNA_P-wetherbeei_contig8439.1.1|Name=mRNA_P-wetherbeei_contig8439.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1047bp|location=Sequence derived from alignment at P-wetherbeei_contig8439:660..2756+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCTCGGCACAGTTCAAAAAGCTGCTCGCGGATGTCTCTAAATTCGT
AGAAGAAGAGGCAATTCCGGCAGAAAAGGTCTTTGAGACCCAGGTAGAAG
ACGCAGCGCGAAGGCACAGCTCACGCTTCGCAGAATACGCGCCTGTCATG
GAGGAGCTCAAAAAGAAGGCGAGGACAAGAGGATTGTGGAACCTCTTCTT
TCCCGGCAGCGGACTGTCAATCGAGCAGTATGCTGCAGTGAGCGAGATTC
TCGGCCGATCCTTCTTGGCTCCCGAAGCGTGCAACTGCAACGCGCCAGAT
ACGGGCAATATGGAGGTGCTGGAAAAATACGGCACACCTGCTCAAAAGAA
GCAGTGGCTCGAACCACTTCTAGAAGGCACAATACGGAGCGCTTTTCTGA
TGACAGAGCCAGAAGTGGCGAGTTCCGATGCCACAAACATTGCCTGCTCG
GCGGAGCTCGACAACGATTCCTATGTTGTCACCGGGCGGAAGTGGTGGGC
GACGGGGGCGCAGGACCCGCGCTGCCGCCTGGCGGTCGTCCTGGTCCGCA
TGCGGGGCCGCGAAGCGTCCGGCGCGGATTGGGACGGACGCCCGGTGCAC
GGACGGCACAGCGTCCTGTTGGTGCCGACAGACTCCCCCGGATTCGAAGT
GCTGCGGCCGCTGAGCGTCTTCGGCTACGACGACGCGCCGCATGGTCACG
CCGAGGTGGTGCTGCGCGGAGTCCGCGTCCCGGCAGCGTCCGCCGTCGTC
CTCGGGGAGGGCCGCGGCTTCGAGGTTGCGCAGAGTCGCCTTGGGCCCGG
GAGGGTGCACCACTGCATGCGGGCCATCGGGATGGCGGAGCGGGCGCTCG
AGGCGGCGGTGCGGCGCAGCTTCGCCCGCACGGCCTTTGGACGGCCGCTC
GCAGAGCACGACGGCGTGCGGAGCGCCGTGGCGCACAGCCGCATGGAGAT
CGACCAGGCACGCCTGCTGGTGCTGCGGTGCGCGCGGCGGCTCGGGGAGC
CCGCCGGGCTGAAAGGCGCCATCCAGGAGGTCTCCATGATCAAGGTG
back to top