mRNA_P-wetherbeei_contig8431.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: A0A6H5K3G8_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G8_9PHAE) HSP 1 Score: 108 bits (270), Expect = 3.470e-25 Identity = 49/95 (51.58%), Postives = 70/95 (73.68%), Query Frame = 2
Query: 434 ITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEV-EKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVE 715
+ VR++ EF HGHPAGA+N+P F +A GM N +FV ++ EK K A++++ CQMG RSA A LE+AG++ +VN+ GG+ AWA+D+SLPVE
Sbjct: 73 VDVRADYEFEHGHPAGAVNVPAFFSTAQGMTVNPDFVDQIAEKFPDKAAKLVIGCQMGSRSAQAAGWLENAGYSGIVNMEGGFSAWARDDSLPVE 167
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: D7G7C7_ECTSI (Putative Ntdin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C7_ECTSI) HSP 1 Score: 105 bits (263), Expect = 8.800e-25 Identity = 49/95 (51.58%), Postives = 69/95 (72.63%), Query Frame = 2
Query: 434 ITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEV-EKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVE 715
+ VR++ EF HG PAGA+N+P F +A GM N +FV ++ EK K A++++ CQMG RSA A LE+AG++ VVN+ GG+ AWA+D+SLPVE
Sbjct: 22 VDVRADYEFEHGRPAGAVNVPAFFSTAQGMTVNPDFVDQIAEKFPDKAAKLVIGCQMGSRSAQAAGWLENAGYSGVVNMEGGFSAWARDDSLPVE 116
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: A0A836CLH4_9STRA (Rhodanese-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH4_9STRA) HSP 1 Score: 104 bits (260), Expect = 8.500e-24 Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 2
Query: 422 SILPITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVER 718
S+ + VR+++EFS GHP G+ N+P F GM N FV +VE+ K+ ++V CQ G RS A +LE AG++N++N+ GGYGAWA+D +LPV R
Sbjct: 64 SVPYVDVRTQEEFSQGHPEGSANIPAFFPGPTGMAPNSEFVSQVEQTYPKEEPLIVGCQAGPRSTKAVSMLEAAGYSNLMNVEGGYGAWARDENLPVSR 162
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: A0A833R5G3_9POAL (Thiosulfate sulfurtransferase 16 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R5G3_9POAL) HSP 1 Score: 97.8 bits (242), Expect = 6.280e-21 Identity = 48/95 (50.53%), Postives = 60/95 (63.16%), Query Frame = 2
Query: 434 ITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVER 718
+ VR+EDEF GHPAGAIN+P +G+ N F+ +V S+D I+V CQ G RS MA L AGF VV++AGGY AW Q N LP+ER
Sbjct: 90 LDVRTEDEFKAGHPAGAINIPYMFKVGSGLSKNPKFLEQVSSVFSQDNEIIVGCQSGKRSLMAATELHSAGFRAVVDLAGGYSAWVQ-NELPIER 183
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: A0A835IQ75_9MAGN (Rhodanese domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IQ75_9MAGN) HSP 1 Score: 95.5 bits (236), Expect = 4.270e-20 Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 2
Query: 368 VDEPRFLRYLPTSSVILLSILPITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVE 715
++ PR + ++ + VR+ +EFS GHP GA+N+P + GM N NF+ EV + KD I+V CQ G RS MA L AGF+ V +IAGGY AW Q LP+E
Sbjct: 68 IEVPRSVPVRVAHELLQAGHRYLDVRTAEEFSAGHPLGAVNIPYMFKAGQGMTKNPNFLEEVSEHFGKDTEIIVGCQSGKRSLMAATDLSSAGFSGVTDIAGGYSAWRQ-TGLPME 182
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: A0A803MAU7_CHEQI (Rhodanese domain-containing protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MAU7_CHEQI) HSP 1 Score: 94.0 bits (232), Expect = 2.090e-19 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 2
Query: 332 GSDCTIAIPCAPVDEP-RFLRYLPTSSVILLSILPITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVE 715
G+ + + P P R R L +L + VR+ +EF+ GH GA+N+P + +GM N NF+ +V + SKD ILV CQ G RS MA L+ AG+T +++IAGGY AW Q + LP E
Sbjct: 66 GTTSNVEVTAIPTSVPVRVAREL-----LLAGHSYLDVRTPEEFTAGHVPGAVNIPYMLRIGSGMTKNPNFLEQVLSQFSKDDEILVGCQSGKRSLMAANDLQSAGYTGIIDIAGGYSAWTQ-SELPTE 188
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: A0A6P6TJ55_COFAR (thiosulfate sulfurtransferase 16, chloroplastic-like n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6TJ55_COFAR) HSP 1 Score: 92.8 bits (229), Expect = 5.370e-19 Identity = 48/94 (51.06%), Postives = 58/94 (61.70%), Query Frame = 2
Query: 434 ITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVE 715
+ VR+ +EFS GH AGA+N+P +GM N NFV EV KD I+V CQ+G RS MA L AGFT + +IAGGY AW Q N LP E
Sbjct: 98 LDVRTAEEFSAGHAAGAVNVPYMFRVGSGMTKNLNFVDEVLAIFGKDDEIIVGCQLGKRSLMAATDLISAGFTGITDIAGGYAAWVQ-NELPTE 190
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: UPI000D6298CD (thiosulfate sulfurtransferase 16, chloroplastic-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D6298CD) HSP 1 Score: 92.8 bits (229), Expect = 5.750e-19 Identity = 47/94 (50.00%), Postives = 59/94 (62.77%), Query Frame = 2
Query: 434 ITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVE 715
+ VR+ +EFS GH GAIN+P +GM N +FV EV KD I+V CQ+G RS MA L AGFT V++IAGGY AW + N LP+E
Sbjct: 101 LDVRTPEEFSAGHAVGAINIPYMFRLGSGMTKNPDFVEEVLSHFGKDDEIIVGCQLGKRSLMAAMDLLSAGFTGVMDIAGGYAAWNK-NGLPIE 193
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: A0A2T7DTY7_9POAL (Rhodanese domain-containing protein n=6 Tax=Panicum TaxID=4539 RepID=A0A2T7DTY7_9POAL) HSP 1 Score: 92.0 bits (227), Expect = 1.010e-18 Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 2
Query: 434 ITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVER 718
+ VR+E EFS GHP GA+N+P + +GM N +F+ +V + SKD I+V CQ G RS MA L AGFT V +IAGG+ +W +DN LP+ +
Sbjct: 97 LDVRTEGEFSAGHPEGAVNVPYMNKTGSGMTKNTHFLEQVSRIFSKDDEIIVGCQSGKRSLMAAAELCSAGFTAVTDIAGGFSSW-RDNGLPITQ 190
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Match: A0A2P6RLI0_ROSCH (Putative thiosulfate sulfurtransferase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RLI0_ROSCH) HSP 1 Score: 91.7 bits (226), Expect = 1.110e-18 Identity = 45/94 (47.87%), Postives = 57/94 (60.64%), Query Frame = 2
Query: 434 ITVRSEDEFSHGHPAGAINLPGFVMSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNVVNIAGGYGAWAQDNSLPVE 715
+ VR+ +EFS GHP+GA+N+P +GM N FV EV K I+V CQ+G RS MA L AGF+ + +IAGGY AW Q N LP E
Sbjct: 87 LDVRTPEEFSAGHPSGAVNIPYLYKVGSGMSKNPEFVKEVSSHFRKHDEIIVGCQLGKRSMMAAADLVAAGFSGITDIAGGYAAWTQ-NRLPTE 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8431.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8431.1.1 >prot_P-wetherbeei_contig8431.1.1 ID=prot_P-wetherbeei_contig8431.1.1|Name=mRNA_P-wetherbeei_contig8431.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp MSAAGMQWNDNFVPEVEKRMSKDARILVSCQMGGRSAMAQQVLEDAGFTNback to top mRNA from alignment at P-wetherbeei_contig8431:661..1870- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8431.1.1 ID=mRNA_P-wetherbeei_contig8431.1.1|Name=mRNA_P-wetherbeei_contig8431.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1210bp|location=Sequence derived from alignment at P-wetherbeei_contig8431:661..1870- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8431:661..1870- >mRNA_P-wetherbeei_contig8431.1.1 ID=mRNA_P-wetherbeei_contig8431.1.1|Name=mRNA_P-wetherbeei_contig8431.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig8431:661..1870- (Phaeothamnion wetherbeei SAG_119_79)back to top |