mRNA_P-wetherbeei_contig8419.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: A0A835Z1Q0_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q0_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.220e-32 Identity = 72/165 (43.64%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 1 TTGLMVLNVAAFSLQVNEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQPYATSVGASGAVFGMMGALTQYSLQNRGVI-AGANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAG 492
T L+ + A + Q P IT GA+ R + YRL+T IFLHAN AHL N +L+++G VE+ FG RRML Y+ +GV+G L + P A+SVGASGA+FGM+GA + NR + AGA+ L ++LR + N I G+ IDN H GG +AG
Sbjct: 21 TNVLLAITAAIYGAQWLVPGITMQGAKITSKIMRGQWYRLVTPIFLHANLAHLLMNSMSLYNIGPFVEQWFGKRRMLSIYVLSGVSGVLASCYWNPRASSVGASGAIFGMVGAAACFFASNRNELGAGADRGLQSILRTVVINTIMGLQISQIDNAGHAGGFVAG 185
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: A0A7S2ENP6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENP6_9STRA) HSP 1 Score: 127 bits (319), Expect = 9.710e-32 Identity = 76/166 (45.78%), Postives = 101/166 (60.84%), Query Frame = 1
Query: 1 TTGLMVLNVAAFSLQVNEPWITDAGARTARLF-KRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQPYATSVGASGAVFGMMGALTQYSLQNRGVIAGANAI-LPALLRAIAANLINGVTTPGIDNWAHVGGLLAG 492
T L+ NVA + LQV P IT GA+ + L R ELYRL++ +FLH HLA N +L+++G VE+CFG R L TYLAAGVAG LL + P SVGASGA+FG++GA + +N+ + + L +L + NLI G +P IDNW H+GG L G
Sbjct: 199 TQRLVWTNVAIYGLQVVFPSITRWGAKRSDLILSRRELYRLISPVFLHGGVVHLAMNSFSLNNIGPEVERCFGQGRFLGTYLAAGVAGNLLSAYMSPN-PSVGASGAIFGLVGAYAVFLGRNKSLFGKSGERGLASLRQTFVTNLIYGFMSPQIDNWGHIGGALGG 363
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: N2AY70_9FIRM (Rhomboid domain-containing protein n=2 Tax=Eubacterium TaxID=1730 RepID=N2AY70_9FIRM) HSP 1 Score: 119 bits (299), Expect = 8.680e-31 Identity = 72/172 (41.86%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 7 GLMVLNVAAFSL------QVNEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQ----PYATSVGASGAVFGMMGALTQYSLQNRGVIAGANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAG 492
GL+++NVA + + +N WI + G +L + E YRL TS+FLH HLA NM L GG +E G R L+ Y+ +G+AG LL + YA S GASGAVFGM+GAL +++N+G G LL I L G+TT G+DNWAH GGL G
Sbjct: 26 GLVIVNVAVWCILELLGNTLNGAWIVEYGGMHPQLVLQGEWYRLFTSMFLHFGAEHLANNMILLAAAGGKLETAVGSIRYLIIYICSGLAGNLLSLYMMIRTGDYAVSAGASGAVFGMIGALVWAAIRNKGKFEGLTT--KGLLFMIVLCLYYGITTAGVDNWAHAGGLAGG 195
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: A0A087SLN7_AUXPR (Rhomboid protease GluP n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SLN7_AUXPR) HSP 1 Score: 117 bits (294), Expect = 5.840e-30 Identity = 69/168 (41.07%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 4 TGLMVL-NVAAFSLQV-NEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQPYATSVGASGAVFGMMGALTQYSLQNRGVIAG-ANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAGVL 498
T L++L NVAAF Q+ + +T GA+ +L + +RL+T FLH N HLA N A+L+ +GG +E G R+ Y+ A V G L +W P + S+GASGA+FG+ GAL + QNR + ++ +L L + +A N++ G +P IDNW H+GGL+ GVL
Sbjct: 2 TDLLILANVAAFGTQLLTKQGLTVWGAKVNQLIVAGQYWRLITPAFLHGNLVHLAINCASLNALGGTLEGLSGRERLASVYMVAAVTGNLASFWGSP-SVSLGASGAIFGLGGALAIFFYQNRNLYGQRSDFVLRQLGQTLALNVVYGFVSPRIDNWGHLGGLVGGVL 168
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: A0A2Z7A0T3_9LAMI (Rhomboid domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7A0T3_9LAMI) HSP 1 Score: 118 bits (295), Expect = 6.960e-30 Identity = 68/165 (41.21%), Postives = 97/165 (58.79%), Query Frame = 1
Query: 1 TTGLMVLNVAAFSLQ-VNEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQPYATSVGASGAVFGMMGALTQYSLQNRGVIAGANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAG 492
T L+ +NV A+ Q V++ + GA+ L +L+RL TS FLHAN HL N +L+ VG VE G +R L Y+ + +A + YW A +VGASGA+FG++G+ +SL++RG+I G L + R I N+ G+ + GIDNW HVGGLL G
Sbjct: 37 TNILLAVNVLAYLAQTVSDGNLLFWGAKINSLISEGQLWRLATSSFLHANIGHLMVNCYSLNSVGPTVENICGPKRYLAIYITSAIASSAMSYWFCK-APAVGASGAIFGLVGSFALFSLRHRGIIKGIEGDLQQIGRVIVLNMAIGLLSQGIDNWGHVGGLLGG 200
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: A0A2P2KTI5_RHIMU (Uncharacterized protein MANES_10G129800 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KTI5_RHIMU) HSP 1 Score: 119 bits (297), Expect = 2.660e-29 Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 1 TTGLMVLNVAAFSLQV-NEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYW--RQPYATSVGASGAVFGMMGALTQYSLQNRGVIAGANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAGV 495
T+ L+ +N+ + Q+ + + GA+ L + +L+RL TS FLHAN HL N +L+ VG VEK G RR L Y A+ VA YW +QP +VGASGA+FG++G+L Y +++RG+I L + I N++ GV + GIDNW H+GGLL GV
Sbjct: 124 TSILLAINILVYVAQLATDGKLLMWGAKINSLIDKGQLWRLATSSFLHANIGHLMVNCYSLNSVGPSVEKLNGSRRFLAVYFASAVASSAASYWFCKQP---AVGASGAIFGLVGSLAVYVIRHRGMIRNGKEDLQHIASVIFLNMVIGVLSQGIDNWGHLGGLLGGV 288
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: M1LYL0_9CLOT (Rhomboid protease GluP n=2 Tax=Clostridium saccharoperbutylacetonicum TaxID=36745 RepID=M1LYL0_9CLOT) HSP 1 Score: 118 bits (296), Expect = 3.730e-29 Identity = 63/175 (36.00%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 1 TTGLMVLNVAAFSL---------QVNEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQPYATSVGASGAVFGMMGALTQYSLQNRGVIAGANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAGVL 498
T+GL+V+N+A F + ++ + D GA+ L + +++RLLT FLH+ H+ACNM +L+ +G +E+ +G + L+ Y+ + + L Y+ P + SVGASGA+FG+MGAL ++ R I + +L++ I NL G++ IDN+AH+GGL+ GVL
Sbjct: 144 TSGLIVINIAIFLITAFLSGSLFDIDTKVLLDYGAKYNALIDKGQVWRLLTCAFLHSGLIHIACNMYSLYIIGPQIEQIYGTLKYLIIYIVSSITASALSYFMSPDSISVGASGAIFGLMGALLAFAFIERNKIQ--KKYMSSLMQVIIINLFIGLSISNIDNFAHIGGLVGGVL 316
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: A0A1D2A6G7_AUXPR (Rhomboid domain-containing protein (Fragment) n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A6G7_AUXPR) HSP 1 Score: 117 bits (294), Expect = 7.320e-29 Identity = 69/168 (41.07%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 4 TGLMVL-NVAAFSLQV-NEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQPYATSVGASGAVFGMMGALTQYSLQNRGVIAG-ANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAGVL 498
T L++L NVAAF Q+ + +T GA+ +L + +RL+T FLH N HLA N A+L+ +GG +E G R+ Y+ A V G L +W P + S+GASGA+FG+ GAL + QNR + ++ +L L + +A N++ G +P IDNW H+GGL+ GVL
Sbjct: 118 TDLLILANVAAFGTQLLTKQGLTVWGAKVNQLIVAGQYWRLITPAFLHGNLVHLAINCASLNALGGTLEGLSGRERLASVYMVAAVTGNLASFWGSP-SVSLGASGAIFGLGGALAIFFYQNRNLYGQRSDFVLRQLGQTLALNVVYGFVSPRIDNWGHLGGLVGGVL 284
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: A0A314UGB2_PRUYE (RHOMBOID-like protein 10 chloroplastic n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314UGB2_PRUYE) HSP 1 Score: 114 bits (286), Expect = 1.040e-28 Identity = 65/166 (39.16%), Postives = 95/166 (57.23%), Query Frame = 1
Query: 1 TTGLMVLNVAAFSLQV-NEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQPYATSVGASGAVFGMMGALTQYSLQNRGVIAGANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAGV 495
T L+ LN+ + Q+ + + GA+ L + +L+RL+TS FLHAN HL N +L+ VG +EK G R L Y A+ +A + YW A +VGASGAVFG++G+L + +++RG++ L + IA N+ G+ GIDNW H GGLL GV
Sbjct: 18 TNVLLALNILVYIAQIATQDELLLWGAKINSLIDKGQLWRLVTSSFLHANVGHLMVNCYSLNSVGPTMEKISGPNRYLALYFASAIASSAMSYWFSE-APAVGASGAVFGLVGSLAVFVMRHRGLVGRGKEDLQHIAHVIAINMAMGLFFKGIDNWGHFGGLLGGV 182
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Match: A0A6P3ZWT6_ZIZJJ (RHOMBOID-like protein 10, chloroplastic isoform X1 n=3 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZWT6_ZIZJJ) HSP 1 Score: 117 bits (292), Expect = 1.110e-28 Identity = 64/165 (38.79%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 1 TTGLMVLNVAAFSLQV-NEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLACNMAALHDVGGLVEKCFGWRRMLVTYLAAGVAGGLLGYWRQPYATSVGASGAVFGMMGALTQYSLQNRGVIAGANAILPALLRAIAANLINGVTTPGIDNWAHVGGLLAG 492
T L+ LNV + Q+ + + GA+ L + +L+RL TS FLHAN HL N +L+ +G VEK G RR L Y+++ +A + YW A +VGASGA+FG++G+ + +++RG++ G L ++R IA N++ G+ + GIDNW H+GG L G
Sbjct: 115 TNILLALNVVIYVAQIATQGKLLLWGAKINSLVDKGQLWRLATSAFLHANIGHLMVNCYSLNSIGPAVEKISGPRRYLGIYISSAIASSAMSYWLCK-APAVGASGAIFGLVGSFAVFVIRHRGLVGGGREELQHIVRIIAINMVIGLLSRGIDNWGHLGGFLGG 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8419.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8419.1.1 >prot_P-wetherbeei_contig8419.1.1 ID=prot_P-wetherbeei_contig8419.1.1|Name=mRNA_P-wetherbeei_contig8419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp MVLNVAAFSLQVNEPWITDAGARTARLFKRYELYRLLTSIFLHANPAHLAback to top mRNA from alignment at P-wetherbeei_contig8419:1852..2807+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8419.1.1 ID=mRNA_P-wetherbeei_contig8419.1.1|Name=mRNA_P-wetherbeei_contig8419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=956bp|location=Sequence derived from alignment at P-wetherbeei_contig8419:1852..2807+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8419:1852..2807+ >mRNA_P-wetherbeei_contig8419.1.1 ID=mRNA_P-wetherbeei_contig8419.1.1|Name=mRNA_P-wetherbeei_contig8419.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig8419:1852..2807+ (Phaeothamnion wetherbeei SAG_119_79)back to top |