mRNA_P-wetherbeei_contig8417.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: D7FHF9_ECTSI (U2 small nuclear ribonucleoprotein auxiliary factor large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF9_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 1.490e-12 Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAF 219
EET+EEC++FG V V +P+ S ++ ++ PGVG+VF F +A+ A ASL+ R FDGRKV+ YWDE F
Sbjct: 205 EETKEECEKFGSVKSVHIPRPSTTSE-AEKPGVGYVFVAFDAVDSASKAAASLRARTFDGRKVEVTYWDEDKF 276
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: A0A7S4I336_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I336_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.860e-11 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAFA 222
E+T EEC QFG + RV++P++ PG +F E+ T AA A+ASL GR FDGRKV AVY+DEA FA
Sbjct: 360 EDTTEECGQFGSLKRVVIPRSG--------PGATKIFLEYATKEDAARAIASLAGRTFDGRKVTAVYYDEARFA 425
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: A0A1E7FB45_9STRA (UAF-1 protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB45_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 4.400e-11 Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAFA 222
E+T+EEC Q+G++L V +PKA PGV +F E+ + ++ A+ LQGR FDGR+V A ++DEA FA
Sbjct: 34 EDTKEECGQYGQLLNVFIPKAGE-------PGVTKIFLEYASTDDSSKAITGLQGRTFDGRRVQATFFDEAKFA 100
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: A0A7S4RBM4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBM4_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 8.150e-9 Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAFA 222
E+T+EEC QFG + +++P+ PG +F E+ + AA A+ L GR FDGRKV+A+++DE FA
Sbjct: 69 EDTKEECSQFGSLKNLVIPR--------DGPGATKIFLEYMSTDDAAAAIKGLAGRTFDGRKVEAIFYDETKFA 134
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: A0A7S1VGS1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGS1_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 2.020e-8 Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAF 219
E+TREEC QFG + V++P++ A G +F E+ ++ AA A+ +L GR FDGRKV+A Y+DE +
Sbjct: 44 EDTREECSQFGALREVIIPRSGEA-------GATKIFLEYVSSDDAAKAIQALAGRTFDGRKVEAAYFDEGRY 109
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: A0A1Z5KDF2_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDF2_FISSO) HSP 1 Score: 58.2 bits (139), Expect = 3.640e-8 Identity = 31/74 (41.89%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAFA 222
++TREEC +FG +L+V++P+ G +F E+G+A A A+ L+GR FDGR V+A ++DEA FA
Sbjct: 276 QDTREECSKFGNLLQVMIPRKGEV-------GATQIFLEYGSADEANAAILGLRGRTFDGRLVEATFFDEAKFA 342
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: A0A7S4RDP7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDP7_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 5.230e-8 Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAFA 222
E+T+EEC QFG + +++P+ PG +F E+ + AA A+ L GR FDGRKV+A+++DE FA
Sbjct: 366 EDTKEECSQFGSLKNLVIPR--------DGPGATKIFLEYMSTDDAAAAIKGLAGRTFDGRKVEAIFYDETKFA 431
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: B7FT80_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FT80_PHATC) HSP 1 Score: 54.7 bits (130), Expect = 7.100e-8 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAF 219
E+TREEC QFG+++ V++PK G G +F E+ T AA A+ +L+GR FDGR+V A EA F
Sbjct: 38 EDTREECSQFGKLISVVIPKKGET-------GEGKIFLEYETTNDAAQAIQALEGRTFDGRRVQATSCAEAKF 103
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: A0A7S2HGX3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGX3_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 9.590e-8 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAFA 222
E+T+EEC QFG + +++P+ PG +F E+ + AA A+ L GR FDGRKV+AV++DE FA
Sbjct: 304 EDTKEECSQFGSLKNLVIPR--------DGPGATKIFLEYLSTDDAAKAIQGLAGRTFDGRKVEAVFYDETKFA 369
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Match: A0A448YVH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVH2_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.820e-7 Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1 EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALASLQGRAFDGRKVDAVYWDEAAF 219
E+T +EC+Q+G++L V +PK PG VF E+ + A+ A+ SL+GR FDG++V+A ++DE F
Sbjct: 337 EDTEQECKQYGQLLNVYIPKKGE-------PGATKVFLEYASTEDASKAIKSLEGRTFDGQRVEATFFDETKF 402 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8417.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8417.2.1 >prot_P-wetherbeei_contig8417.2.1 ID=prot_P-wetherbeei_contig8417.2.1|Name=mRNA_P-wetherbeei_contig8417.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp EETREECQQFGEVLRVLVPKASAAADPSQAPGVGFVFAEFGTAAAAAVALback to top mRNA from alignment at P-wetherbeei_contig8417:2496..2717- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8417.2.1 ID=mRNA_P-wetherbeei_contig8417.2.1|Name=mRNA_P-wetherbeei_contig8417.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=222bp|location=Sequence derived from alignment at P-wetherbeei_contig8417:2496..2717- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8417:2496..2717- >mRNA_P-wetherbeei_contig8417.2.1 ID=mRNA_P-wetherbeei_contig8417.2.1|Name=mRNA_P-wetherbeei_contig8417.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=222bp|location=Sequence derived from alignment at P-wetherbeei_contig8417:2496..2717- (Phaeothamnion wetherbeei SAG_119_79)back to top |