mRNA_P-wetherbeei_contig8391.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: D7G5B8_ECTSI (VHS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B8_ECTSI) HSP 1 Score: 120 bits (302), Expect = 9.780e-30 Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 103 PEQELAKLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTLEAERTGRPLPPEAAADLGGGXXXXXDSGGG 441
P Q + KL +D+ V++K+ LC++MLP S GV D A +EV+GFLEACRPRM L+EAG+ GALGE+ F +CL++NDALLRTL+AER G P+ E D+ GG D GG
Sbjct: 206 PPQTMEKLEEDLQMVKDKITLCREMLPESAGVDKDTALSEVVGFLEACRPRMVDLVEAGVGGALGEDTFAKCLQINDALLRTLDAEREGTPIAVED--DISGGAAPLLDLDGG 316
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: A0A7S2GD13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GD13_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.280e-27 Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 121 KLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTLEAERTGRPLPPEAAADL 402
KL+QD+ V EK+ LC++MLP S G+ D+A AEV+GFLEAC+PRM LIE G+ G LGE+L + L+VND LL+TLEAE+ G PLP E +
Sbjct: 174 KLAQDLSVVAEKIKLCREMLPESSGIETDDALAEVVGFLEACKPRMVDLIECGMQGMLGEDLVSQTLQVNDDLLKTLEAEKNGTPLPVETKTPI 267
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: A0A835Z2K5_9STRA (VHS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K5_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.630e-27 Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 103 PEQELAKLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTLEAERTGRPLPPEAAADLG 405
P QEL KL D+ CVQEK+ LCQQ+L +PG+ HD+ E+IGFLEACRPR+ LI+AG++G L ++ E CLK+NDALLRTL AER G + E+ DLG
Sbjct: 218 PAQELVKLKLDLVCVQEKLELCQQVLQETPGIEHDDVLRELIGFLEACRPRLHELIQAGIIGHLEPDVLEGCLKINDALLRTLAAERDGTKIGVESI-DLG 317
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: A0A7S2W1F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1F0_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.290e-26 Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 106 EQELAKLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTLEAERTGRPLPPEAAA 396
E + KL QD+ V+EK+ LC++MLP SPG+ HDEA +EV+GFLEAC+PR++ LIEAG+ L E++ L V D L +TLEAERTG P+PP + A
Sbjct: 216 EASMDKLRQDLVAVEEKIKLCREMLPESPGIEHDEALSEVVGFLEACQPRLSDLIEAGMQDILSEDILSYTLHVFDELQKTLEAERTGTPIPPTSPA 312
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: A0A482SYD1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYD1_9ARCH) HSP 1 Score: 103 bits (258), Expect = 6.100e-26 Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 106 EQELAKLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTLEAER 363
E E KL +D+ V EKV LC++ML SPG+ DE A+V+GFLEACR RM +IEAG G LGE+LF CLKVNDA+L+TLEAE+
Sbjct: 33 EDEFFKLQRDLIVVMEKVRLCREMLLVSPGIDKDELLADVVGFLEACRDRMVDVIEAGTQGLLGEDLFSECLKVNDAILKTLEAEK 118
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: F0YK31_AURAN (VHS domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK31_AURAN) HSP 1 Score: 106 bits (265), Expect = 7.010e-25 Identity = 53/97 (54.64%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 115 LAKLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTLEAERT-------GRPLPP 384
LAK+ DV+ V EK+ LC++M+PNSPG+ HD+A AEV+GFLEACRPR+A L+E+GL GA G+E CLKVND L L+ E G P PP
Sbjct: 178 LAKVRADVEIVAEKIRLCKEMVPNSPGIDHDDALAEVVGFLEACRPRLAILVESGLSGAFGDETLTSCLKVNDDLHEALQGEAKPRVYEAPGLPKPP 274
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: A0A812V5W7_SYMMI (TOL1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V5W7_SYMMI) HSP 1 Score: 104 bits (259), Expect = 1.640e-24 Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 1
Query: 121 KLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTLEAER 363
KL D+ V EK+ LC++MLP SPG+ DE AEV+GFLEAC+ RM LIE G G L E++FE CL+VNDALLRTLEAE+
Sbjct: 189 KLRNDLGVVMEKIRLCREMLPESPGIQQDEILAEVVGFLEACQERMIDLIETGTQGLLAEDVFELCLRVNDALLRTLEAEK 269
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: A0A812SNP5_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SNP5_SYMMI) HSP 1 Score: 100 bits (250), Expect = 2.490e-23 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 157 VVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTLEAERTGRPLP 381
V LC++MLP SPG+ DE AEVIGFLEAC+ RM LIEAG G L E++FE CL+ NDA+LRTLEAE+ G P+P
Sbjct: 1 VRLCREMLPQSPGIHQDEILAEVIGFLEACQERMFDLIEAGTQGLLIEDVFELCLRANDAVLRTLEAEKNGTPIP 75
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: A0A7S1ZAX7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAX7_TRICV) HSP 1 Score: 89.4 bits (220), Expect = 4.670e-19 Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 1
Query: 97 PTPEQELAKLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGEELFERCLKVNDALLRTL----EAERTGRPLPPEAAA 396
P E AK+S+D+ ++E++ LCQ ML V +EA VIGFLEAC PRM LI+AG+ GALGE++ ERCL VND L RTL E + R L P ++
Sbjct: 29 PKDESPDAKVSKDISTLEEQIDLCQTMLKTERDVDSNEALLAVIGFLEACVPRMVDLIQAGMQGALGEDILERCLVVNDRLCRTLGDCDETDPEKRKLIPSPSS 132
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Match: A0A8J2X0G8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0G8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.940e-18 Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 115 LAKLSQDVDCVQEKVVLCQQMLPNSPGVAHDEAFAEVIGFLEACRPRMAGLIEAGLLGALGE-ELFERCLKVNDALLRTL--EAERTGRPLP 381
+ K+ D+D V E V L + MLPNSPG+ DEA +EV+GFLEACRPR+A L+E GL G LG+ + L VNDA+ + L EA RP P
Sbjct: 178 IVKVRTDLDVVAEHVSLLESMLPNSPGIKEDEAMSEVVGFLEACRPRLANLVEVGLAGGLGDADTVAHLLAVNDAVQQVLADEAASENRPTP 269 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8391.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8391.2.1 >prot_P-wetherbeei_contig8391.2.1 ID=prot_P-wetherbeei_contig8391.2.1|Name=mRNA_P-wetherbeei_contig8391.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp MDGGGGGGGGGDGGGGSGSGAAAEEPTPEQELAKLSQDVDCVQEKVVLCQback to top mRNA from alignment at P-wetherbeei_contig8391:2355..2795- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8391.2.1 ID=mRNA_P-wetherbeei_contig8391.2.1|Name=mRNA_P-wetherbeei_contig8391.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig8391:2355..2795- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8391:2355..2795- >mRNA_P-wetherbeei_contig8391.2.1 ID=mRNA_P-wetherbeei_contig8391.2.1|Name=mRNA_P-wetherbeei_contig8391.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig8391:2355..2795- (Phaeothamnion wetherbeei SAG_119_79)back to top |