mRNA_P-wetherbeei_contig838.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig838.3.1
Unique NamemRNA_P-wetherbeei_contig838.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: A0A7S2Y1J4_9STRA (40S ribosomal protein S3a n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1J4_9STRA)

HSP 1 Score: 367 bits (942), Expect = 6.900e-126
Identity = 181/242 (74.79%), Postives = 207/242 (85.54%), Query Frame = 1
Query:    4 KTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHGDAGAEDTGAAVAR 729
            K++KGGK      KK  DPF KKEWYDVKAPS F+ R  GKTLITRTQGTKIASEGL+GRVFEFSL DLN DE+Q +RKIKLCVE+VQG SCLTNFHGMD+TRDKLCSLIKKWQTLIEA+ DV+T DGY++R+FCIGFT +   QIK+T YAQ SQV+AIR+KM+DIMTEEA K DLK+LV KFIPE+IS EI KACQGI+PLQNVFIRK K+LKKP+FDL+KLME+HGD G ED GA V+R
Sbjct:   36 KSKKGGK------KKITDPFLKKEWYDVKAPSFFSNRTPGKTLITRTQGTKIASEGLQGRVFEFSLADLNHDEEQAYRKIKLCVEEVQGTSCLTNFHGMDLTRDKLCSLIKKWQTLIEARVDVKTTDGYFMRLFCIGFTKRMPNQIKKTAYAQASQVKAIRKKMVDIMTEEAVKCDLKELVAKFIPESISTEIEKACQGIFPLQNVFIRKVKMLKKPRFDLIKLMEMHGDGG-EDVGAGVSR 270          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: D7FKH7_ECTSI (40S ribosomal protein S3a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH7_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 1.680e-124
Identity = 181/245 (73.88%), Postives = 200/245 (81.63%), Query Frame = 1
Query:    1 GKTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHGDAGAEDTGAAVARDE 735
            GKT K G       KKTVDP T KEWYD+KAPS+F VR  GKTL+TRT+GTKIASEGLKGRVFEFSLGDLN DED G+RK+KLC EDVQG S LTNFHGMD+TRDKLCSLIKKWQTLIE Q DVRT DGY LRI CIGFT KQ  QIKQTCYAQ SQ+RA+R+KM DIM+EEASK DL++LV KFIPE IS EILKA Q IYP+QNV+IRK K LKKPKFDL KLME+HGD   ED G  + R++
Sbjct:    4 GKTNKKG-GRKGNKKKTVDPMTLKEWYDIKAPSIFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNADEDLGYRKVKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEGQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMSEEASKCDLRELVLKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDIGMEMERED 247          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: A0A835Z1K4_9STRA (40S ribosomal protein S3a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K4_9STRA)

HSP 1 Score: 357 bits (915), Expect = 3.830e-122
Identity = 180/243 (74.07%), Postives = 197/243 (81.07%), Query Frame = 1
Query:    1 GKTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHGDAGAEDTGAAVAR 729
            GKTQK         KKTVDPFT+KEWYD+KAPS F VR AGKTLITRT GTKIASEGLKGRVFE SLGDLN DE+ GFRKIKLC EDVQG +CLT FHGMD+TRDKLCSLIKKWQTLIEAQ DVRT DGYYLR+FCIGFT K   Q+K TCYA+ +QVRAIRRKM +IMT+E SK DLK+LVQKF+ + +S  I KA +GI PLQNV IRK KVLKKPKFDL KLME+H     ED GAAVAR
Sbjct:    4 GKTQKKIGKKGKGKKKTVDPFTRKEWYDIKAPSTFAVRNAGKTLITRTTGTKIASEGLKGRVFEVSLGDLNNDEEHGFRKIKLCCEDVQGTNCLTTFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYYLRVFCIGFTKKTDGQVKATCYAKAAQVRAIRRKMTEIMTDECSKCDLKELVQKFVLDTVSERITKAARGIVPLQNVLIRKCKVLKKPKFDLTKLMEMH----TEDAGAAVAR 242          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: F0YJC6_AURAN (40S ribosomal protein S3a n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJC6_AURAN)

HSP 1 Score: 343 bits (879), Expect = 1.470e-116
Identity = 168/243 (69.14%), Postives = 196/243 (80.66%), Query Frame = 1
Query:    4 KTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHGDAGAEDTGAAVARD 732
            K++KGGK      KK  DPF KKEWY++KAPS+F+ R AGKTL+TRTQGTKIAS+ LKGRVF+ SL DLN DEDQ +RKIKL  ED+QG +CLTNFHGMDMTRDKL SLIKKWQTLIE   DV+T DGY LR+FCI FTTK   QI + CYA  +QVR IR+KM++IM +EA+K DLK+LV K IPE +  EI KAC GI+PLQNVF+RK KVLKKPKFDL KLME+HGDAG ED+GAAV R+
Sbjct:   11 KSKKGGK------KKATDPFLKKEWYEIKAPSMFSQRNAGKTLVTRTQGTKIASDALKGRVFDLSLADLNNDEDQTYRKIKLVCEDIQGYNCLTNFHGMDMTRDKLASLIKKWQTLIEGNVDVKTTDGYTLRMFCIAFTTKMPNQIAKMCYANSAQVRLIRKKMVEIMRDEATKCDLKELVLKLIPEYMGTEIEKACAGIFPLQNVFVRKVKVLKKPKFDLTKLMELHGDAGNEDSGAAVPRE 247          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: A0A7S4E908_9STRA (40S ribosomal protein S3a n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E908_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.570e-114
Identity = 165/237 (69.62%), Postives = 191/237 (80.59%), Query Frame = 1
Query:    4 KTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHGDAGAEDTG 714
            +++KGGK      KK VDPF KKEWY++KAPS+F+VR  GKTL+TRTQGTKIAS+ LKGRVFE SLGDLN DEDQ +RKIKL  EDVQG +CLTNFHGM MTRDKL SLIKKWQTL+E   DV+T DGY LR+F IGFTTK   Q+ + CYA  +QVR IR+KM+D+M EEASK DLKDLV K IPE +  EI KAC GI+P+QNVF+RK KVLKKPKFDLVKLME+H   GAED+G
Sbjct:   37 RSKKGGK------KKAVDPFLKKEWYEIKAPSMFSVRNCGKTLVTRTQGTKIASDALKGRVFEISLGDLNNDEDQTYRKIKLICEDVQGYNCLTNFHGMGMTRDKLASLIKKWQTLVEGNVDVKTTDGYTLRMFAIGFTTKMPNQVSKMCYANSAQVRQIRKKMVDVMREEASKCDLKDLVLKLIPEYMGGEIEKACAGIFPMQNVFVRKVKVLKKPKFDLVKLMELHSGEGAEDSG 267          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: A0A7S3K3W2_9STRA (40S ribosomal protein S3a n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3W2_9STRA)

HSP 1 Score: 336 bits (861), Expect = 7.470e-114
Identity = 166/240 (69.17%), Postives = 195/240 (81.25%), Query Frame = 1
Query:    4 KTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHG--DAGAEDTGA 717
            K++KGGK      KK  DPF KKEWY+VKAP++F+VR AGKTL+TRTQG K+AS+GLKGRVFEFSL DLNKDEDQ +RKIKL VE+VQG SCLTNFHGMDMTRDKL SLIKKWQ+LIE   D++T DGY +R+FCI FTTK   QI + CYA  +Q+RAIR+KM++IM +EASK DLKDLV K IPE +  EI KAC GI+PLQNVFIRK KVLKKPKFD+ KLME+H   DA A++T A
Sbjct:   11 KSKKGGK------KKATDPFLKKEWYEVKAPNMFSVRKAGKTLVTRTQGQKVASDGLKGRVFEFSLADLNKDEDQSYRKIKLVVEEVQGYSCLTNFHGMDMTRDKLSSLIKKWQSLIEGNVDIKTTDGYTVRLFCIAFTTKMPDQISKFCYANSAQIRAIRKKMVEIMRDEASKCDLKDLVLKLIPEFMGTEIEKACAGIFPLQNVFIRKVKVLKKPKFDITKLMELHTETDASAKETQA 244          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: A0A0G4GVD9_9ALVE (40S ribosomal protein S3a n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GVD9_9ALVE)

HSP 1 Score: 335 bits (860), Expect = 8.330e-114
Identity = 164/245 (66.94%), Postives = 200/245 (81.63%), Query Frame = 1
Query:    4 KTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHG-DAGAEDTGAAVARDE 735
            K +KGGK      KK  DPF KKEWYD+KAPSLF+VR+ GKTL+T++QGTK++++GL+GRVFE SL DLNKDEDQ FRK+KLC ED+QG++CLT+FHGMDMTRDKLCSLIKKW TLIEA  DV+T DGY +RIF I FTT++  Q+K TCYAQ SQ+R IR+KM+DI+  EA KG L+DLV+K IPE+I  EI KAC+ I+PLQNVFIRK K+LKKPK D+VKLME+HG DAG  D G+ + R E
Sbjct:   11 KGKKGGK------KKVGDPFLKKEWYDLKAPSLFSVRSFGKTLVTKSQGTKLSADGLRGRVFEVSLADLNKDEDQAFRKMKLCCEDIQGRNCLTDFHGMDMTRDKLCSLIKKWHTLIEAHVDVKTTDGYLMRIFAIAFTTRRKDQVKSTCYAQSSQIRQIRKKMVDIIKAEAEKGQLRDLVKKLIPESIGKEIDKACKSIFPLQNVFIRKVKILKKPKMDIVKLMELHGNDAG--DDGSKMVRPE 247          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: A0A7S1TRR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRR2_9STRA)

HSP 1 Score: 332 bits (850), Expect = 3.170e-112
Identity = 164/241 (68.05%), Postives = 193/241 (80.08%), Query Frame = 1
Query:    4 KTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHGD-AGAEDTGAAV 723
            K +KGGK      KK +DPF++KEWY V AP  F+ R AGKTL+ RT GTKIAS+ LKGRVFE +L DLNKDED+ +RKI+L  EDVQG + LTNFHGMDMTRDK+CS+I+KWQTLIEA+ DVRT DGY LR+FCIGFT K   Q+K+ CYAQ SQ++AIRR+M++ MTEEASK DL++LV KFIPE I  +I KACQ IYPLQNVFIRK KVLKKPKFD+VK ME+HGD A AED G  V
Sbjct:   28 KGKKGGK------KKIIDPFSRKEWYSVVAPGFFSNRVAGKTLVNRTAGTKIASDALKGRVFEVNLADLNKDEDRAYRKIRLVCEDVQGDNVLTNFHGMDMTRDKICSVIRKWQTLIEARCDVRTTDGYILRMFCIGFTKKSQDQLKKACYAQSSQIKAIRRRMVERMTEEASKCDLRELVLKFIPEVIGEDIEKACQNIYPLQNVFIRKVKVLKKPKFDIVKFMELHGDMATAEDKGELV 262          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: H3G898_PHYRM (40S ribosomal protein S3a n=27 Tax=Oomycota TaxID=4762 RepID=H3G898_PHYRM)

HSP 1 Score: 331 bits (849), Expect = 4.060e-112
Identity = 164/244 (67.21%), Postives = 195/244 (79.92%), Query Frame = 1
Query:    4 KTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHGDAGAEDTGAAVARDE 735
            K +KGGK      KK VDPF +K+WYDVKAP++F+ R  GKTL+ RT GTKIASEGL+GRVFE  L DLNKDEDQ FRKI+LC E++QG   +T FHGMD TRDKLCSLI+KWQTLIEA  DV+T DGY +R+FCI FT K+  QIK+T YA+ +Q+RAIR+KM  IMTEEASK D+KDL  KF+PE I  EI KA QGIYPLQNV+IRK K+LKKPKFDLV+LME+H + GAE+ GA VAR+E
Sbjct:   11 KGKKGGK------KKVVDPFARKDWYDVKAPAIFSERNCGKTLVNRTSGTKIASEGLRGRVFEVCLADLNKDEDQAFRKIRLCAEEIQGNQIVTGFHGMDFTRDKLCSLIRKWQTLIEAFVDVKTTDGYLVRLFCIAFTKKRPNQIKKTTYAKTAQIRAIRKKMTSIMTEEASKCDIKDLFLKFVPEIIGKEIEKATQGIYPLQNVYIRKCKILKKPKFDLVRLMELH-EGGAEEKGAKVAREE 247          
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Match: A0A812NHF5_SYMMI (40S ribosomal protein S3a n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHF5_SYMMI)

HSP 1 Score: 331 bits (849), Expect = 4.200e-112
Identity = 178/244 (72.95%), Postives = 197/244 (80.74%), Query Frame = 1
Query:    4 KTQKGGKSXXXXXKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQGTKIASEGLKGRVFEFSLGDLNK-DEDQGFRKIKLCVEDVQGQSCLTNFHGMDMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQ-IKQTCYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKF--IPEAISAEILKACQGIYPLQNVFIRKAKVLKKPKFDLVKLMEVHGDAGAEDTGAAV 723
            K +KGGK      KKTVDPF++KE Y VKAPS+F  R AG+T+IT+T GTKIASEGLKGRVFE SL DLN  DE QG+RKIKL  EDV G   LTNFHGMD+TRDKLCSLI+KWQTLIEA  DVRT DGY LR+FCIGFT KQ  Q  K TCYAQ  QVRAIRRKM DIMTEEASK DLK+LVQKF  +PE+I  EI KACQ I+PLQNV IRK KVL+KPKFDLVKLME+HGD+G EDTGAA+
Sbjct:    7 KGRKGGK------KKTVDPFSRKETYQVKAPSIFATRNAGRTIITKTIGTKIASEGLKGRVFEVSLADLNGGDESQGYRKIKLVCEDVNGYEVLTNFHGMDITRDKLCSLIRKWQTLIEAFVDVRTTDGYVLRMFCIGFTKKQGNQQAKSTCYAQSGQVRAIRRKMFDIMTEEASKCDLKELVQKFCSMPESIGHEIEKACQSIFPLQNVCIRKVKVLRKPKFDLVKLMELHGDSG-EDTGAAL 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig838.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2Y1J4_9STRA6.900e-12674.7940S ribosomal protein S3a n=1 Tax=Fibrocapsa japon... [more]
D7FKH7_ECTSI1.680e-12473.8840S ribosomal protein S3a n=2 Tax=Ectocarpus TaxID... [more]
A0A835Z1K4_9STRA3.830e-12274.0740S ribosomal protein S3a n=1 Tax=Tribonema minus ... [more]
F0YJC6_AURAN1.470e-11669.1440S ribosomal protein S3a n=1 Tax=Aureococcus anop... [more]
A0A7S4E908_9STRA1.570e-11469.6240S ribosomal protein S3a n=3 Tax=Pelagomonas calc... [more]
A0A7S3K3W2_9STRA7.470e-11469.1740S ribosomal protein S3a n=1 Tax=Aureoumbra lagun... [more]
A0A0G4GVD9_9ALVE8.330e-11466.9440S ribosomal protein S3a n=1 Tax=Chromera velia C... [more]
A0A7S1TRR2_9STRA3.170e-11268.05Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
H3G898_PHYRM4.060e-11267.2140S ribosomal protein S3a n=27 Tax=Oomycota TaxID=... [more]
A0A812NHF5_SYMMI4.200e-11272.9540S ribosomal protein S3a n=2 Tax=Symbiodinium mic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig838contigP-wetherbeei_contig838:5960..8433 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FKH7
Preferred nameRPS3a
PFAMsRibosomal_S3Ae
Model size735
Max annot lvl2759|Eukaryota
KEGG rclassRC00434
KEGG koko:K01807,ko:K02984
KEGG ReactionR01056
KEGG Pathwayko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03010,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map03010
KEGG ModuleM00004,M00007,M00165,M00167,M00177,M00179,M00580
Hectar predicted targeting categoryother localisation
GOsGO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030054,GO:0030312,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0034645,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0055044,GO:0070013,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons5
Evalue2.75e-125
EggNOG OGsCOG1890@1|root,KOG1628@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein S3Ae
Ec32 orthologEc-12_002020.1
EC5.3.1.6
Descriptionstructural constituent of ribosome
Cds size735
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187036.764133-CDS-P-wetherbeei_contig838:5959..60301683187036.764133-CDS-P-wetherbeei_contig838:5959..6030Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig838 5960..6030 -
1683187036.7801044-CDS-P-wetherbeei_contig838:6368..65611683187036.7801044-CDS-P-wetherbeei_contig838:6368..6561Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig838 6369..6561 -
1683187036.792703-CDS-P-wetherbeei_contig838:6752..69561683187036.792703-CDS-P-wetherbeei_contig838:6752..6956Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig838 6753..6956 -
1683187036.8026974-CDS-P-wetherbeei_contig838:7899..80121683187036.8026974-CDS-P-wetherbeei_contig838:7899..8012Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig838 7900..8012 -
1683187036.812042-CDS-P-wetherbeei_contig838:8279..84331683187036.812042-CDS-P-wetherbeei_contig838:8279..8433Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig838 8280..8433 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig838.3.1prot_P-wetherbeei_contig838.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig838 5960..8433 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig838.3.1

>prot_P-wetherbeei_contig838.3.1 ID=prot_P-wetherbeei_contig838.3.1|Name=mRNA_P-wetherbeei_contig838.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp
GKTQKGGKSKKGGKKKTVDPFTKKEWYDVKAPSLFNVRAAGKTLITRTQG
TKIASEGLKGRVFEFSLGDLNKDEDQGFRKIKLCVEDVQGQSCLTNFHGM
DMTRDKLCSLIKKWQTLIEAQADVRTQDGYYLRIFCIGFTTKQAFQIKQT
CYAQGSQVRAIRRKMIDIMTEEASKGDLKDLVQKFIPEAISAEILKACQG
IYPLQNVFIRKAKVLKKPKFDLVKLMEVHGDAGAEDTGAAVARDE
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mRNA from alignment at P-wetherbeei_contig838:5960..8433-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig838.3.1 ID=mRNA_P-wetherbeei_contig838.3.1|Name=mRNA_P-wetherbeei_contig838.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2474bp|location=Sequence derived from alignment at P-wetherbeei_contig838:5960..8433- (Phaeothamnion wetherbeei SAG_119_79)
GGCAAGACGCAAAAGGGCGGCAAGAGCAAGAAGGGGGGAAAGAAGAAGAC CGTCGACCCCTTCACCAAGAAGGAGTGGTACGACGTGAAGGCACCGTCTC TTTTCAACGTGCGGGCTGCAGGGAAGACGCTCATCACCCGGACTCAGGGC ACGAGTGAGTTGTTTTATGAGTGCTTTGTGTTTTATAGTATTTTCGCTCT CTATGCAAGTGTGGCCAGCGTTTGCCGTGTACGTTCATCGGTCCTTTTTG TGCCTGATGATGGGAATTGGTGCTAAGCATTTTTCGAGGGCGAGTGCTTT GCCCACGCAATGTCTGGTTGTAGGGTTAGGGCCTCCATTTCCTCGTCAAT ATGCCAGCGACGCTCCAACTGGTGTGAATATCTCTTCGGTTGGTGGTGGT TGCGGCCCCGTCGCGTTGCAGAGATCGCGTCGGAGGGGCTCAAGGGGCGC GTGTTCGAGTTCTCGCTGGGTGACCTCAACAAAGACGAGGACCAGGGCTT CCGCAAGATCAAGCTCTGCGTCGAGGACGTTCAGGTCCGTCTTCCCGTGT GTCTTTCCGTTTCGGGTGCTTTCCACCAGTTTATGTTTTATGCTGTTCTT TTGTTATCTGCAGATGTTTTTGTGGTGTTGGGTTCTCTTTTAACTCTCCG ACTGCGACATGGCTGTAAAAAGGGCGTGCTCGTGTGGATGCGTCTGGGGT GAATACGGTGGCACTATAGCGGCACAGTGGGGGGGGCGGCGCTTTCTGGA ACCGTAACGGTGCCGGCGGCTCGGAAACTACCGCCCGGCACATGTCGGCG TGCTATCTGCGCTGGATGCTGTTCGAGAGCGGCGATGATAGCGCCGCGGA GTGGTCGGTCCTTTTCTTCCGTGGTGCAGTTCGGGATATGTTTCAACCGG TCAACATTTCCATAAGCCAGCGGAAGCGCCGCCTTGGGCGGCGGCGGGGG CTGCTGCTGCTGTTCGGGCGCTCGCGGATTTGGATTTCTGCGCTCTGGAT GGTGCTGACCGACATGCGTCGCGCATTGCCGTTGCCGGTTGCCGGTAGCG CAGCCACATCGGGAGCAGCATTGCGGCGTAGGGATGGCGAACAGTTGGCA GCAGGGGTGGCTGCACTCTGTCCGCGGCGGTTCAGCTTTCTTGCGGCGAC AGCAGTGGCGGCAGCTATGTTGGTGGCAGGTGGCGGCGTCAACACGGCAT GCTTCACCCAGTGGCTCTGGTGACTACAGTCGCAGCTGGGAACTGCGCTG GCGTTGCAGCCGGTCAACGGGCGCACCCTCTTCCTGAGCGAAGCGGCGGC GTTGGCGGCGGCAACCAGCCATCCCTCTCGTCGTCCGTTTAATTAGAGCG TCTTCCGCCTGCCTACCAGCCATTTAAGCGAGGCTGCCGCACTCAATACT CTCCGCTGCCTCCCTCCTCCGGCCTCTCTCTTTCCACTTCTTTTGAAACG TCGTCAACGACGACAAAATGAGAACAGGGTCAGTCGTGCCTGACGAACTT CCACGGGATGGACATGACGCGGGACAAGCTGTGCTCGCTCATCAAGAAGT GGCAGACGCTCATCGAGGCGCAGGCTGACGTGCGGACGCAGGACGGCTAC TACCTCCGCATCTTCTGCATCGGCTTCACCACCAAGCAGGCCTTCCAGAT CAAGCAGACCTGCTATGCCCAGGGCTCGCAGGTGAGAGGGTGAAGGAAGG CTCATAACGGCTAGGGTTTGTGCAGTGGCAGCATGGAAGGCTTGGATGTT TTGCGGTTTGGAAGTTCCGACACATGCCACTCGTTGCAGTTACATTGAGC GGTTGCAAATAGAGCAAGCGTACCGTTCTACTTCCTCATAACGGTGAACC TGCAATAACTTGAAACTTCCAGGTGCGGGCAATCCGACGGAAGATGATCG ACATCATGACGGAAGAGGCGTCCAAGGGGGACCTCAAGGACCTCGTCCAG AAGTTCATCCCCGAGGCCATCTCCGCCGAGATCCTTAAGGCCTGCCAGGG CATCTACCCGCTCCAAAACGTGTTCATCCGCAAGGCCAAGGTTCTCAAGA AGCCCAAGTTCGACCGTGAGTGTCACTATAGATAGATTTGCCGCTTTCAG TTCTCAGACATAGATTCTGCAATTTCCAACCTTGGTGGAGTGCAGCCAGA GGACCCAGGATGTTCTATTAGAAAGCTGGCTTATCGTTCAGGTATAGCCG TAAGAAATGGATGAATGCTACAGCATCTTTCATTCCGCTCTCTTTGCGCC CCCCGTCCTGCGTGTCTCTCACGCCCGCTTTGAAACTAACTTGGAACTGT ATCTCTTTTTCTCTCTCTCTTTCTCTGTCTCCCTTTCTTCTTCGCTCCGT CGGCCGCTCTGTGTGTCTCGTTATTCGGCTGGCGATGGCTTCGCTTTGTA CAGTGGTCAAGCTGATGGAGGTGCACGGGGACGCCGGGGCGGAGGACACC GGCGCCGCCGTTGCACGGGACGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig838:5960..8433-

>mRNA_P-wetherbeei_contig838.3.1 ID=mRNA_P-wetherbeei_contig838.3.1|Name=mRNA_P-wetherbeei_contig838.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig838:5960..8433- (Phaeothamnion wetherbeei SAG_119_79)
GGCAAGACGCAAAAGGGCGGCAAGAGCAAGAAGGGGGGAAAGAAGAAGAC
CGTCGACCCCTTCACCAAGAAGGAGTGGTACGACGTGAAGGCACCGTCTC
TTTTCAACGTGCGGGCTGCAGGGAAGACGCTCATCACCCGGACTCAGGGC
ACGAAGATCGCGTCGGAGGGGCTCAAGGGGCGCGTGTTCGAGTTCTCGCT
GGGTGACCTCAACAAAGACGAGGACCAGGGCTTCCGCAAGATCAAGCTCT
GCGTCGAGGACGTTCAGGGTCAGTCGTGCCTGACGAACTTCCACGGGATG
GACATGACGCGGGACAAGCTGTGCTCGCTCATCAAGAAGTGGCAGACGCT
CATCGAGGCGCAGGCTGACGTGCGGACGCAGGACGGCTACTACCTCCGCA
TCTTCTGCATCGGCTTCACCACCAAGCAGGCCTTCCAGATCAAGCAGACC
TGCTATGCCCAGGGCTCGCAGGTGCGGGCAATCCGACGGAAGATGATCGA
CATCATGACGGAAGAGGCGTCCAAGGGGGACCTCAAGGACCTCGTCCAGA
AGTTCATCCCCGAGGCCATCTCCGCCGAGATCCTTAAGGCCTGCCAGGGC
ATCTACCCGCTCCAAAACGTGTTCATCCGCAAGGCCAAGGTTCTCAAGAA
GCCCAAGTTCGACCTGGTCAAGCTGATGGAGGTGCACGGGGACGCCGGGG
CGGAGGACACCGGCGCCGCCGTTGCACGGGACGAG
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