mRNA_P-wetherbeei_contig8370.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: D7G7X3_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X3_ECTSI) HSP 1 Score: 130 bits (327), Expect = 4.950e-29 Identity = 78/223 (34.98%), Postives = 95/223 (42.60%), Query Frame = 2
Query: 674 EVKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWWYTHVGKKVVIDGKGRGSLIIAPSFIEKRSAVSDDVGDSDIDGGEAGGGGNSCSDNRGVSIELRLQLAGLLLALRQMLRKKSERWLAAATLAAADNCFLSYFALASHRLNLLCHRRCPSCHAHPRVCSPKIARFVVKSKRSFAAHQLDQYRTGLRGNLLQALPKAEAEKKPPSWPYG 1342
+++L MYSFGAPR GN+++AA Y + VPDSFRVVVDGD VPGVP+WWYTHVG KV+IDG GRGSLII PSF+EKR F +SKR +H++ Y+TGLRGNLLQA+P + P WPYG
Sbjct: 98 KLELCMYSFGAPRAGNAIYAARYNDVVPDSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGHGRGSLIIDPSFVEKR--------------------------------------------------------------------------------------------------------FFTRSKRHVLSHRIPNYQTGLRGNLLQAVPPEFQRRLPAHWPYG 216
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: D8LEN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEN3_ECTSI) HSP 1 Score: 128 bits (322), Expect = 1.110e-26 Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = 2
Query: 671 GEVKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWWYTHVGKKVVIDGKGRGSLIIAPSFIEKRSAV 907
G ++L M+SFGAPR+GNS++AA Y + VP SFRVVVDGD VPGVP+WWYTHVG KV+IDG+GRGSLI+ PSF+EKR V
Sbjct: 894 GTIELHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLIMDPSFVEKRFFV 972
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: D8LEN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN4_ECTSI) HSP 1 Score: 120 bits (300), Expect = 5.900e-24 Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 2
Query: 662 PVLGEVKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWWYTHVGKKVVIDGKGRGSLIIAPSFIEKR 898
P+ +V+L+MYSFGAPR GNS+FAA E VPDSFRVVVDGD VPG+P+W Y H G + +IDG+GRGSLII PSF+EKR
Sbjct: 1281 PLTPKVELRMYSFGAPRAGNSIFAARCDEVVPDSFRVVVDGDPVPGIPSWRYAHAGTQALIDGRGRGSLIIDPSFVEKR 1359
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: A0A6H5L591_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L591_9PHAE) HSP 1 Score: 110 bits (274), Expect = 6.690e-22 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 2
Query: 662 PVLGEVKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWWYTHVGKKVVIDGKGRGSLIIAPSFIEKR 898
P+ +V+L+MYS GAPR GNS+FAAH E VPDSFRV+V GD VPG+PTW Y H G + +IDG+ R SL+I PSF EKR
Sbjct: 217 PLTPKVELRMYSVGAPRAGNSIFAAHCDEVVPDSFRVMVHGDPVPGIPTWRYAHAGTQALIDGRRRASLMIDPSFAEKR 295
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: A0A6H5JCT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT1_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.580e-20 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 2
Query: 671 GEVKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWWYTHVGKKVVIDGKGRGSLIIAPSFIEKR 898
GEV+L ++SFGAPR GN +AA Y AVP SFR+VVDGD VPG+PTW Y H G KV+IDG+GRG L++ PS E+R
Sbjct: 870 GEVELSLFSFGAPRAGNPRYAARYNAAVPRSFRIVVDGDPVPGLPTWRYGHAGTKVLIDGRGRGPLVLDPSLAEQR 945
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: A0A812RKV5_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RKV5_SYMMI) HSP 1 Score: 92.4 bits (228), Expect = 6.130e-16 Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 2
Query: 677 VKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWWYTHVGKKVVIDGKGRGSLIIAPSFIEK 895
V++ MY+FG PR+GN FA Y VP+SFR+VVDGD V GVP Y H+G ++++D G GS+II PSF+EK
Sbjct: 183 VRMCMYNFGTPRVGNWHFATEYNRIVPNSFRIVVDGDIVSGVPKGNYKHIGTEIIVDPLGAGSIIIDPSFVEK 255
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: A0A5D6XZI1_9STRA (Lipase_3 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZI1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 6.350e-16 Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 2
Query: 677 VKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWW--YTHVGKKVVIDGKGRGSLIIAPSFIEKRSAVS 910
+K+ MY+FG PR+GN F HY + VP S+RVV+DGD VPGVP +W Y HVG +V ID +G +LI+ PSFIE+ VS
Sbjct: 763 MKVNMYNFGGPRVGNPSFCRHYNKCVPSSYRVVMDGDIVPGVPRFWGLYQHVGTEVAIDAEG--NLIVDPSFIEQHLHVS 840
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: K3WU34_GLOUD (Lipase_3 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU34_GLOUD) HSP 1 Score: 90.9 bits (224), Expect = 1.380e-15 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 2
Query: 677 VKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWW--YTHVGKKVVIDGKGRGSLIIAPSFIEKRSAVS 910
+K+ MY+FG PR+GN F HY + VP S+RVV+DGD VPGVP +W Y HVG ++ ID +G +LI+ PSF+E+ VS
Sbjct: 323 MKVNMYNFGGPRVGNPSFCRHYNKCVPTSYRVVMDGDIVPGVPKFWGLYQHVGTEISIDLEG--NLIVDPSFVERHLHVS 400
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: A0A7S2DGL2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGL2_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.550e-15 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 2
Query: 665 VLGEVKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWWYTHVGKKVVIDGKGRGSLIIAPSFIEK 895
+L +++ MY+FG+PR+GN FA+ Y + +P+ FRVVVDGD V G+P WY HVG +VV+D G SLI+ PSF+E+
Sbjct: 452 MLPPIRIGMYNFGSPRVGNFAFASRYDDLIPNCFRVVVDGDIVTGIPRAWYKHVGTEVVVDCAG--SLIVDPSFVER 526
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Match: T0R3G9_SAPDV (Lipase_3 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R3G9_SAPDV) HSP 1 Score: 92.0 bits (227), Expect = 2.110e-15 Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 2
Query: 671 GEVKLKMYSFGAPRIGNSLFAAHYGEAVPDSFRVVVDGDFVPGVPTWW--YTHVGKKVVIDGKGRGSLIIAPSFIEKRSAVS 910
G ++ MY+FG PR+GN F Y VP+SFRVV DGD V G+P +W Y HVG++V IDG G ++++ PSFIE+R VS
Sbjct: 721 GATRVSMYNFGGPRVGNPAFVRQYNRTVPESFRVVYDGDLVAGIPRFWGLYEHVGREVAIDGAG--NVLLDPSFIERRLLVS 800 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8370.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8370.1.3 >prot_P-wetherbeei_contig8370.1.3 ID=prot_P-wetherbeei_contig8370.1.3|Name=mRNA_P-wetherbeei_contig8370.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=508bp MLQRLVSNVANATHTLGNRLGGGTGGSGVAGAGGGGHGGGFGRRSREHSHback to top mRNA from alignment at P-wetherbeei_contig8370:2..2723- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8370.1.3 ID=mRNA_P-wetherbeei_contig8370.1.3|Name=mRNA_P-wetherbeei_contig8370.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2722bp|location=Sequence derived from alignment at P-wetherbeei_contig8370:2..2723- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8370:2..2723- >mRNA_P-wetherbeei_contig8370.1.3 ID=mRNA_P-wetherbeei_contig8370.1.3|Name=mRNA_P-wetherbeei_contig8370.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1524bp|location=Sequence derived from alignment at P-wetherbeei_contig8370:2..2723- (Phaeothamnion wetherbeei SAG_119_79)back to top |