mRNA_P-wetherbeei_contig8369.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: A0A836CG09_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG09_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.580e-20 Identity = 57/108 (52.78%), Postives = 68/108 (62.96%), Query Frame = 2
Query: 743 KMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELEGSAAL 1066
K+ETDLYAL KA T+ C I+ SPDGA+MA+ ARDK +RVFDFR GKLRR +DESL ++E A L LD +DFG+R A ERELE S AL
Sbjct: 213 KVETDLYALAKAGTQPCHIALSPDGASMAVLARDKVVRVFDFRRGKLRRAFDESLKVFERAHE------------------DGRLKLDAHDFGRRRATERELEASPAL 302
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: A0A6H5L6W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6W6_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 7.670e-19 Identity = 60/122 (49.18%), Postives = 71/122 (58.20%), Query Frame = 2
Query: 737 RMKMETDLYALQKAKTRACSISFSPDGAAMAITARDKK---LRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELEGSAALSAA---PQG 1084
+ KM+TDLY L KAKTR CSISFSPDG +MA+TARDK+ +R FDFRTGKLRR YDES E + L +D D GK++A E+ELE S A A PQG
Sbjct: 79 KFKMDTDLYDLAKAKTRPCSISFSPDGKSMAVTARDKQAWSVRAFDFRTGKLRRKYDESRRAMEDMLAS------------------GQLKMDAMDLGKKSAVEKELEVSTAHFAGFVTPQG 182
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: A0A7R9UE76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE76_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 8.820e-17 Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 2
Query: 743 KMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELE 1051
KM TDLY L K +T AC ++ SPD + A+TA+D+K+RVFD R GKLRR YDESL ++E A+ L +D D+GKR A ERELE
Sbjct: 49 KMSTDLYELVKNRTSACGLAISPDAKSFAVTAKDRKVRVFDLRRGKLRRTYDESLDVFEKAKDE------------------GRLGIDALDWGKRGAVERELE 133
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: A0A7S1TNM8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNM8_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.700e-16 Identity = 51/107 (47.66%), Postives = 61/107 (57.01%), Query Frame = 2
Query: 743 KMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELEGSAA 1063
K +TDLY L KAKT AC ++ P + AITA D+K+RVFD R GKLRR YDESL ++ AQ A L LD D+GKR A EREL G+ A
Sbjct: 248 KFDTDLYDLVKAKTTACGLAVCPQSRSFAITAADRKVRVFDLRKGKLRRTYDESLEVFNRAQAA------------------GKLGLDSMDWGKRGATERELAGNTA 336
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: A0A1Y1ILJ4_KLENI (Cyclophilin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ILJ4_KLENI) HSP 1 Score: 88.6 bits (218), Expect = 1.860e-15 Identity = 56/122 (45.90%), Postives = 66/122 (54.10%), Query Frame = 2
Query: 692 PFTANLVSPFLSFVGRMKMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELEGS 1057
P T +L S +SF R K +TDLYAL KAKT A S+ SPDG T+ DK++RVF F TGKLRR YDES Q A L LDP DFG+R A E+E+E S
Sbjct: 235 PDTGDLPSSSVSF--RYKTDTDLYALAKAKTTASSLEISPDGRQFVTTSPDKRIRVFRFETGKLRRSYDESREAAAELQRGDA----------------ELFKLDPIDFGRRLAIEKEIETS 338
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: G4ZVH8_PHYSP (PPIase cyclophilin-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=G4ZVH8_PHYSP) HSP 1 Score: 87.8 bits (216), Expect = 3.210e-15 Identity = 51/111 (45.95%), Postives = 63/111 (56.76%), Query Frame = 2
Query: 737 RMKMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELEGSAALS 1069
+ K ETDLY L K KT A +I S DG + +TA+D ++RVF F TGK+RR YDESLP++E AQ L LD DFG+RAA EREL S +S
Sbjct: 219 KFKGETDLYELAKCKTYATAIDVSADGKSFVVTAKDNQIRVFRFATGKMRRKYDESLPVFEDAQA------------------DGTLHLDALDFGRRAAVERELANSDVVS 311
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: A0A2P4Y9K0_9STRA (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y9K0_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.190e-14 Identity = 51/111 (45.95%), Postives = 65/111 (58.56%), Query Frame = 2
Query: 737 RMKMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELEGSAALS 1069
+ K ETDLY L K+KT +I S DG + +TA+DK++RVF F TGK+RR YDESL ++E AQ + L LD DFG+RAA EREL S A+S
Sbjct: 237 KFKGETDLYELAKSKTYVTAIDVSRDGQSFVVTAKDKQIRVFRFTTGKMRRKYDESLAVFEDAQADGS------------------LHLDALDFGRRAAVERELADSDAVS 329
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: A0A5D6YCT6_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCT6_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.500e-14 Identity = 52/113 (46.02%), Postives = 61/113 (53.98%), Query Frame = 2
Query: 737 RMKMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELEGSAALSAA 1075
+ K +TDLY L K R SI S GA +TA D +LRVF F TGKLRR YDE+LP++E AQ A L LD DFG+RAA EREL G+ AA
Sbjct: 256 KFKSDTDLYELAKRGARPTSIDVSASGADFVVTATDAQLRVFRFATGKLRRTYDEALPVFEDAQADGA------------------LRLDALDFGRRAAVERELAGAVDAGAA 350
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: UPI001BF6CD83 (Uncharacterized protein n=2 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF6CD83) HSP 1 Score: 83.6 bits (205), Expect = 8.120e-14 Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 2
Query: 737 RMKMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELE 1051
R+K +TDL+ + K KT +I SPDG +IT+ D+++RVF FRTGKLRRVYDESL + + Q + A L LD DFG+R A E+ELE
Sbjct: 235 RLKSDTDLFEIVKCKTSVSAIEVSPDGKQFSITSPDRRIRVFWFRTGKLRRVYDESLEVAQDLQRSDAP----------------LYRLDAIDFGRRMAVEKELE 323
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Match: A0A2J6JRM4_LACSA (Uncharacterized protein n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6JRM4_LACSA) HSP 1 Score: 79.7 bits (195), Expect = 1.060e-13 Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 2
Query: 737 RMKMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRVYDESLPIYEAAQTAQAXXXXXXXXXXXXXXXXNLLALDPNDFGKRAAGERELE 1051
++K +TDL+A+ K+KT +I SPDG AIT+ D+++R+F +RTGKLRRVYDESL E AQ Q L L+ DFG+R A ERE+E
Sbjct: 25 KLKSDTDLFAIVKSKTAISAIEVSPDGKQFAITSPDRRIRIFWYRTGKLRRVYDESL---ENAQDLQRSDVP-------------LYRLEAIDFGRRMAVEREIE 113 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8369.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8369.1.1 >prot_P-wetherbeei_contig8369.1.1 ID=prot_P-wetherbeei_contig8369.1.1|Name=mRNA_P-wetherbeei_contig8369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp MKMETDLYALQKAKTRACSISFSPDGAAMAITARDKKLRVFDFRTGKLRRback to top mRNA from alignment at P-wetherbeei_contig8369:935..2823- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8369.1.1 ID=mRNA_P-wetherbeei_contig8369.1.1|Name=mRNA_P-wetherbeei_contig8369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1889bp|location=Sequence derived from alignment at P-wetherbeei_contig8369:935..2823- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8369:935..2823- >mRNA_P-wetherbeei_contig8369.1.1 ID=mRNA_P-wetherbeei_contig8369.1.1|Name=mRNA_P-wetherbeei_contig8369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig8369:935..2823- (Phaeothamnion wetherbeei SAG_119_79)back to top |