mRNA_P-wetherbeei_contig8354.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: D7G6I9_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I9_ECTSI) HSP 1 Score: 186 bits (473), Expect = 8.840e-57 Identity = 95/167 (56.89%), Postives = 128/167 (76.65%), Query Frame = 1
Query: 1 LSECNDRMGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWW 501
L +CN+RMGA +A+G+R A+SA+LQRYREILFD++TEFKKT AA+QRK+++ LF+ + A D + EHLLRE+NAIH+SL+SATGVLGQA EA+ESLR QR+ L A STLS+M N+FP+INRVVEAIQ++K +D +I+ +V+AAC+ F W+
Sbjct: 60 LGDCNERMGAKVAKGARKADSAMLQRYREILFDFSTEFKKTSAALQRKRDTTELFKSSRADRGGGDGTG-------DFEQEHLLREQNAIHNSLQSATGVLGQAAEARESLRHQRATLGAASSTLSSMQNRFPAINRVVEAIQKKKAKDRLIIAAVMAACIFFTFWY 219
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: A0A6S9HNZ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HNZ6_HETAK) HSP 1 Score: 174 bits (441), Expect = 7.860e-52 Identity = 96/169 (56.80%), Postives = 120/169 (71.01%), Query Frame = 1
Query: 1 LSECNDRMGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWMF 507
LS+CN++M AC+ GSRTANSALLQRYREILFDYTTEFK T AIQRK+ES LFR A G XXXX D EHLLRERNAI ++R++ V+GQA ++ LR Q + L T TL+ +++ PSI RVVEAIQ++K RDN+IVG VIA +CF +W++F
Sbjct: 68 LSDCNEKMNACVTAGSRTANSALLQRYREILFDYTTEFKNTSVAIQRKRESQELFRSARHGGXXXXXXAAR-----DPAMEHLLRERNAIGGAMRASNSVIGQAFATRDELRAQGATLQGTSGTLAGITSNLPSIGRVVEAIQKKKYRDNMIVGGVIALLICFTLWYLF 231
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: A0A7S2CM06_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CM06_9STRA) HSP 1 Score: 154 bits (390), Expect = 4.310e-44 Identity = 80/170 (47.06%), Postives = 109/170 (64.12%), Query Frame = 1
Query: 1 LSECNDRMGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWMFG 510
LSECN+RM C++ RTA++ALLQRYREI FDY +F +T AI R +E +LFR D HL RE AI+SSLRSA+ V+GQA E + +L QR+ L+ G TL +S+ +PSI RV+ +IQ+R+ RDN++VG VI+ C+CF +WW+FG
Sbjct: 73 LSECNERMSQCVSTVPRTASAALLQRYREIYFDYKRDFDETACAILRTREQVQLFRGTQVQ-------RNKGTERDDTGMNHLYREEEAINSSLRSASNVIGQADEVRGALWSQRNTLTLAGGTLGQLSSAYPSIGRVIVSIQQRRYRDNMVVGLVISVCICFTLWWVFG 235
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: A0A7S1XU31_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU31_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.200e-41 Identity = 73/168 (43.45%), Postives = 112/168 (66.67%), Query Frame = 1
Query: 1 LSECNDRMGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWM 504
L++CN+RM + GSR A++ALL+RYREILFDY +EF+K + I +KKE A L + G G HL E+N+I+SS+ +A L QA A++SLR+QR MLS G TL +++QFP++N+++E+I+RR+ R+NV++G I++C+CF IW++
Sbjct: 68 LADCNERMSQVVTSGSRAASAALLKRYREILFDYKSEFRKLSSTIAKKKERADLL----SGGGRGGGIGAGGDGGDGVGMRHLYAEQNSINSSMHTAGQTLDQASGARDSLRRQREMLSGAGGTLQDLASQFPAVNQIIESIRRRRTRENVVMGLAISSCVCFTIWYL 231
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: A0A4D9D8W2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W2_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.180e-39 Identity = 75/168 (44.64%), Postives = 106/168 (63.10%), Query Frame = 1
Query: 1 LSECNDRMGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWM 504
L++CN+ MG +A G+R ++SA+LQRYREIL Y +F+K+ +QRK+E+ L + G + + LLRERNAIHSSLR +L QA E K+ LR QR L+ + L+ ++N PSI+RVV+AIQR K RDN+I+G + A CLCF IW++
Sbjct: 88 LAKCNEAMGQMLAHGARPSSSAVLQRYREILDYYANDFQKSQTVLQRKRETTELL--STRAGGKPNTGTKNGADWGNPQMDQLLRERNAIHSSLRGVDSILSQAMETKDGLRAQRHSLTGANTGLAGLANNLPSISRVVDAIQRIKTRDNIIIGLLTACCLCFTIWYL 253
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: W7TVL4_9STRA (Snare component n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVL4_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.070e-38 Identity = 74/161 (45.96%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 22 MGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWM 504
MG +A G+R ++SA+LQRYREIL Y +F+K+ +QRK+E+A L + G + + LLRERNAIHSSLR +L QA E K+ LR QR L+ S L+ ++N PSI+RVV+AIQR K RDN+I+G + A CLCF IW++
Sbjct: 1 MGQMLAHGARPSSSAVLQRYREILDYYANDFQKSQTVLQRKRETAELL--STRAGGKPNTGTKNGADWGNPQMDQLLRERNAIHSSLRGVDSILSQAMETKDGLRAQRHSLTGANSGLAGLANNLPSISRVVDAIQRIKTRDNIIIGLLTACCLCFTIWYL 159
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: A0A836CCE5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE5_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.930e-36 Identity = 79/169 (46.75%), Postives = 104/169 (61.54%), Query Frame = 1
Query: 1 LSECNDRMGACMARGSRTA-NSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWM 504
L+E D M A A G RT ++RYR L D E+ + +AIQR +++ LFR A G DADT+HLLRE I SSLR A+ VLGQA EA+ESLRQQR LS T +TL A+++ FP I R+V+ I RR+ RDN+IV +V+A C+CF +WW+
Sbjct: 73 LTEMLDAMAA--APGLRTIPQQEQMKRYRVNLIDSRAEYNRASSAIQRHRDANELFRGRQA--------RRHKAEGADADTDHLLRESQYIGSSLRGASNVLGQAHEARESLRQQRETLSRTNATLGALTSAFPGIGRIVDQIGRRRTRDNMIVATVLALCICFTLWWL 231
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: A0A6U1TG21_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1TG21_TRICV) HSP 1 Score: 133 bits (335), Expect = 1.610e-35 Identity = 71/163 (43.56%), Postives = 106/163 (65.03%), Query Frame = 1
Query: 19 RMGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWMF 507
RM R R+ +S L++RYREILFD + +FKKT AA+ R++E+ LFR ++ G GPD TEHLLRERNAI +S R+A VLGQA+E + LR Q + L T+++++ P +N ++++I+RR+ RD+ IV +VIAAC+ F +W++F
Sbjct: 107 RMAPAAERTGRSQHSLLVKRYREILFDCSADFKKTSAAVARRREAMELFRGSDMNGNVEE--------GPDPATEHLLRERNAILNSTRAAESVLGQAEEIRTDLRSQGTTLRGVRGTMTSIAGNVPGLNGLIDSIRRRRNRDDQIVSAVIAACILFTLWYLF 261
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: A0A7S1BGG8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGG8_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.860e-35 Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 1
Query: 1 LSECNDRMGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWMF 507
+SE NDRM A R R + L++RYREIL+DY+T+FKK + RK++ A LFR + G A D +HLLRE+ AI +SL SAT V+GQA+E LR QR ML T++ ++ P +NR+++AI+++K +DN+I+ VIAAC+ F +W++F
Sbjct: 95 MSERNDRMAAVAERSQRDQQTLLVRRYREILYDYSTDFKKIRGNLARKRDEAELFRTRS--GTAKKEAG-------DEGMDHLLREKRAIGNSLLSATSVIGQAREIHGDLRTQRKMLHGVSGTVAGLTANVPGVNRLIDAIRKKKNKDNLIISGVIAACVLFTMWYLF 254
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Match: A0A7S2NX08_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NX08_9STRA) HSP 1 Score: 122 bits (306), Expect = 4.210e-31 Identity = 66/170 (38.82%), Postives = 104/170 (61.18%), Query Frame = 1
Query: 1 LSECNDRMGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRANAPGAAXXXXXXXXXXGPDADTEHLLRERNAIHSSLRSATGVLGQAQEAKESLRQQRSMLSATGSTLSAMSNQFPSINRVVEAIQRRKVRDNVIVGSVIAACLCFAIWWMFG 510
L M R + + +S L++RYREILFDY +F+K A+Q+++E+A LF A G+ TEHLLRERNAI++S++SA VL QA E + +LR QR+ L + +S +++ P +N V++AI+R++ RD++I+ VIA C+ F +W++FG
Sbjct: 110 LGNLTGNMANIAKRTNSSQHSLLVKRYREILFDYKADFEKAAQAVQKRRETAALFHGAGRNGSLNNEDGGA--------TEHLLRERNAINNSIKSADTVLSQASEIRANLRTQRNSLGVSMGYVSNIASNVPGLNHVMDAIRRKRSRDDLILSGVIATCILFTLWYLFG 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8354.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8354.3.1 >prot_P-wetherbeei_contig8354.3.1 ID=prot_P-wetherbeei_contig8354.3.1|Name=mRNA_P-wetherbeei_contig8354.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp MGACMARGSRTANSALLQRYREILFDYTTEFKKTGAAIQRKKESARLFRRback to top mRNA from alignment at P-wetherbeei_contig8354:2019..2531- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8354.3.1 ID=mRNA_P-wetherbeei_contig8354.3.1|Name=mRNA_P-wetherbeei_contig8354.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig8354:2019..2531- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8354:2019..2531- >mRNA_P-wetherbeei_contig8354.3.1 ID=mRNA_P-wetherbeei_contig8354.3.1|Name=mRNA_P-wetherbeei_contig8354.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig8354:2019..2531- (Phaeothamnion wetherbeei SAG_119_79)back to top |