mRNA_P-wetherbeei_contig8282.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8282.1.1
Unique NamemRNA_P-wetherbeei_contig8282.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A397CKV5_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CKV5_9STRA)

HSP 1 Score: 101 bits (252), Expect = 8.250e-26
Identity = 44/101 (43.56%), Postives = 73/101 (72.28%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEKV 303
            F ++Y +  K+G GA+ +VR AT +      ++ +A+K  ++  LT +DV+D+ GEVG+L ++ HPNV+ + GF++EP+ ++ VM++V GGELFDRIV+KV
Sbjct:   18 FRDQYQLGDKIGEGAFSVVRRATHR----QTNVVYAVKCFKKVRLTEQDVKDIHGEVGLLKQMKHPNVLNLHGFFDEPEYYYTVMDLVEGGELFDRIVDKV 114
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BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A425D5S8_9STRA (Protein kinase domain-containing protein (Fragment) n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D5S8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.050e-22
Identity = 43/100 (43.00%), Postives = 72/100 (72.00%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEK 300
            F ++Y +  K+G GA+ +VR AT +      ++ +A+K  ++  LT +DV+D+ GEVG+L ++ HPNV+ + GF++EP+ ++ VM++V GGELFDRIV+K
Sbjct:   20 FRDQYHLGDKIGEGAFSVVRRATHR----QTNVVYAVKCFKKVRLTEQDVKDIHGEVGLLKQMKHPNVLNLHGFFDEPEYYYTVMDLVEGGELFDRIVDK 115
[Close]
BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A397E528_9STRA (Protein kinase domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E528_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.630e-22
Identity = 44/101 (43.56%), Postives = 70/101 (69.31%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEKV 303
            F E Y + +KLG GA+ +VR AT K +  +    +A+K  ++  LT  D  D+  EV IL +++HPN++ ++GFY+EP+ F++VM++V GGELFD ++EKV
Sbjct:   18 FREHYELGKKLGEGAFSVVRRATHKETKKV----YAVKCYRKTRLTSRDAEDIHYEVSILQQMHHPNIINLYGFYDEPEYFYMVMDLVEGGELFDELLEKV 114
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BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A397ACW4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACW4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.080e-22
Identity = 43/100 (43.00%), Postives = 72/100 (72.00%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEK 300
            F ++Y +  K+G GA+ +VR AT +      ++ +A+K  ++  LT +DV+D+ GEVG+L ++ HPNV+ + GF++EP+ ++ VM++V GGELFDRIV+K
Sbjct:   19 FRDQYQLGDKIGEGAFSVVRRATHR----QTNVVYAVKCFKKVRLTEQDVKDIHGEVGLLKQMKHPNVLNLHGFFDEPEYYYTVMDLVEGGELFDRIVDK 114
[Close]
BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A7S2E3F7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E3F7_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.640e-21
Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEK 300
            F+E Y +K  LG GA+  VRE   + +      PFAIK V RA LT ED   L  EV IL +L H ++++++ F+EEPQ +++VME++ GGELFDRIV K
Sbjct:   19 FDELYRLKGVLGTGAFSTVREGKHRRNK---EHPFAIKCVNRAKLTEEDAAALLDEVAILKELKHQHIIRLYDFFEEPQTYYLVMELMSGGELFDRIVAK 115
[Close]
BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A024UWX2_9STRA (CAMK/CAMK1 protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWX2_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.440e-21
Identity = 41/100 (41.00%), Postives = 73/100 (73.00%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEK 300
            F ++Y + +K+G GA+ +VR+AT +      ++ +A+K  ++A L+ +DV+D+  EV +L ++ HPNV+ + GF++EP+ ++ VM++V GGELFDRIV+K
Sbjct:   17 FRDQYQLGEKIGEGAFSVVRKATHR----QTNVVYAVKCFKKAKLSEQDVKDIHLEVALLKQMKHPNVLNLHGFFDEPEYYYTVMDLVEGGELFDRIVDK 112
[Close]
BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A3R6YD52_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YD52_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 6.830e-21
Identity = 41/100 (41.00%), Postives = 73/100 (73.00%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEK 300
            F ++Y + +K+G GA+ +VR+AT +      ++ +A+K  ++A L+ +DV+D+  EV +L ++ HPNV+ + GF++EP+ ++ VM++V GGELFDRIV+K
Sbjct:   17 FRDQYQLGEKIGEGAFSVVRKATHR----QTNVVYAVKCFKKAKLSEQDVKDIHLEVALLKQMKHPNVLNLHGFFDEPEYYYTVMDLVEGGELFDRIVDK 112
[Close]
BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: W4GT77_9STRA (CAMK protein kinase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GT77_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.040e-20
Identity = 42/101 (41.58%), Postives = 69/101 (68.32%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEKV 303
            F E Y + +KLG GA+ +VR A  K +  +    +A+K  ++  LT  D  D+  EV IL +++HPN++ ++GFY+EP+ F++VM++V GGELFD ++EK+
Sbjct:   18 FREHYELGKKLGEGAFSVVRRAIHKETKKV----YAVKCYRKTRLTSRDAEDIHYEVSILQQMHHPNIINLYGFYDEPEYFYMVMDLVEGGELFDELLEKL 114
[Close]
BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A024UV98_9STRA (CAMK protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV98_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.470e-20
Identity = 42/101 (41.58%), Postives = 71/101 (70.30%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEKV 303
            F E Y + +K+G GA+ +VR AT K +  +    FA+K  ++  LT  D +D+  EV IL +++HPN++ ++ FY+EP+ +++VM++V GGELFD+++EKV
Sbjct:   18 FREHYVLGRKIGEGAFSVVRRATHKETNKV----FAVKCYRKTRLTARDAQDIHYEVSILKQMHHPNIINLYAFYDEPEFYYMVMDLVEGGELFDQLLEKV 114
[Close]
BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Match: A0A485LIU6_9STRA (Phosphorylase kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIU6_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.780e-20
Identity = 41/101 (40.59%), Postives = 72/101 (71.29%), Query Frame = 1 
Query:    1 FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDVRDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEKV 303
            F E+Y++ +K+G GA+ +VR AT K +       FA+K  +++ L+  D  D+  EV IL +++HP+++ +  FY+EP+ +++VM++V+GGELFDR+VEK+
Sbjct:   18 FREQYNLGKKIGEGAFSVVRHATHKAT----QEEFAVKCYRKSRLSARDAEDIHYEVSILQQMHHPHIINLHAFYDEPEYYYMVMDLVQGGELFDRLVEKI 114
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8282.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A397CKV5_9STRA8.250e-2643.56Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A425D5S8_9STRA1.050e-2243.00Protein kinase domain-containing protein (Fragment... [more]
A0A397E528_9STRA1.630e-2243.56Protein kinase domain-containing protein n=5 Tax=A... [more]
A0A397ACW4_9STRA2.080e-2243.00Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A7S2E3F7_9STRA2.640e-2148.00Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A024UWX2_9STRA3.440e-2141.00CAMK/CAMK1 protein kinase n=1 Tax=Aphanomyces inva... [more]
A0A3R6YD52_9STRA6.830e-2141.00Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4GT77_9STRA1.040e-2041.58CAMK protein kinase n=2 Tax=Aphanomyces astaci Tax... [more]
A0A024UV98_9STRA1.470e-2041.58CAMK protein kinase n=1 Tax=Aphanomyces invadans T... [more]
A0A485LIU6_9STRA1.780e-2040.59Phosphorylase kinase n=1 Tax=Aphanomyces stellatus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8282contigP-wetherbeei_contig8282:1279..1752 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog157072.XP_008861828.1
PFAMsPkinase
Model size309
Max annot lvl2759|Eukaryota
KEGG koko:K04515
KEGG Pathwayko04012,ko04020,ko04024,ko04066,ko04114,ko04217,ko04261,ko04310,ko04360,ko04713,ko04720,ko04722,ko04725,ko04728,ko04740,ko04745,ko04750,ko04911,ko04912,ko04916,ko04921,ko04922,ko04925,ko04934,ko04971,ko05031,ko05152,ko05200,ko05205,ko05214,map04012,map04020,map04024,map04066,map04114,map04217,map04261,map04310,map04360,map04713,map04720,map04722,map04725,map04728,map04740,map04745,map04750,map04911,map04912,map04916,map04921,map04922,map04925,map04934,map04971,map05031,map05152,map05200,map05205,map05214
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.64e-22
EggNOG OGsKOG0033@1|root,KOG0033@2759|Eukaryota
EC2.7.11.17
Descriptioncalmodulin-dependent protein kinase activity
Cds size309
COG categoryS
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187031.2003932-CDS-P-wetherbeei_contig8282:1278..13781683187031.2003932-CDS-P-wetherbeei_contig8282:1278..1378Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8282 1279..1378 +
1683187031.213963-CDS-P-wetherbeei_contig8282:1543..17521683187031.213963-CDS-P-wetherbeei_contig8282:1543..1752Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8282 1544..1752 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8282.1.1prot_P-wetherbeei_contig8282.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8282 1279..1752 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8282.1.1

>prot_P-wetherbeei_contig8282.1.1 ID=prot_P-wetherbeei_contig8282.1.1|Name=mRNA_P-wetherbeei_contig8282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp
FNERYSVKQKLGVGAYGIVREATLKFSALMLSIPFAIKRVQRAGLTPEDV
RDLRGEVGILAKLNHPNVVKVFGFYEEPQRFFVVMEIVRGGELFDRIVEK
VG*
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mRNA from alignment at P-wetherbeei_contig8282:1279..1752+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8282.1.1 ID=mRNA_P-wetherbeei_contig8282.1.1|Name=mRNA_P-wetherbeei_contig8282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig8282:1279..1752+ (Phaeothamnion wetherbeei SAG_119_79)
TTTAATGAGCGATACAGTGTCAAGCAGAAGCTGGGCGTCGGGGCCTACGG
TATAGTCCGAGAAGCGACCCTTAAGTTTAGTGCCTTAATGCTTTCTATCC
GTCCCCTTGGATCCTTAAAAATAACAAGATATACACAACTAAAACAGCCA
CCCTTGGATCTCTTAGCTTGCGCTATGCGCCTTAACTCCCTTCCCACAAA
TCCTCTCCTCCACCTTTCCTCATTCCCTCCCTCCTCGCATCCGCGCGCGC
AGACCACGGGCGAAGCTTTCGCCATTAAACGCGTGCAGCGTGCCGGACTC
ACGCCGGAGGACGTCCGGGATCTCCGCGGTGAGGTCGGCATTCTGGCCAA
ATTGAACCACCCGAACGTCGTGAAAGTCTTCGGCTTCTATGAGGAGCCCC
AGCGCTTTTTCGTCGTCATGGAGATCGTGCGCGGCGGCGAGCTTTTTGAC
AGAATCGTCGAAAAGGTTGGTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8282:1279..1752+

>mRNA_P-wetherbeei_contig8282.1.1 ID=mRNA_P-wetherbeei_contig8282.1.1|Name=mRNA_P-wetherbeei_contig8282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig8282:1279..1752+ (Phaeothamnion wetherbeei SAG_119_79)
TTTAATGAGCGATACAGTGTCAAGCAGAAGCTGGGCGTCGGGGCCTACGG
TATAGTCCGAGAAGCGACCCTTAAGTTTAGTGCCTTAATGCTTTCTATCC
CTTTCGCCATTAAACGCGTGCAGCGTGCCGGACTCACGCCGGAGGACGTC
CGGGATCTCCGCGGTGAGGTCGGCATTCTGGCCAAATTGAACCACCCGAA
CGTCGTGAAAGTCTTCGGCTTCTATGAGGAGCCCCAGCGCTTTTTCGTCG
TCATGGAGATCGTGCGCGGCGGCGAGCTTTTTGACAGAATCGTCGAAAAG
GTTGGTTGA
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