mRNA_P-wetherbeei_contig8272.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8272.1.1
Unique NamemRNA_P-wetherbeei_contig8272.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: A0A835YZ33_9STRA (Exportin1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 3.830e-129
Identity = 202/229 (88.21%), Postives = 210/229 (91.70%), Query Frame = 1 
Query:   10 ANPRKAAYKGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQA 696
            A  R AAYKGIL+R RHVLI RM+KPEEVL+VEDENGE+VRETT+DTEAIAQYKTMRETLVYLTHL YEDTE+IML KL LQVDGREFSW +LNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCE KRGKDNKA+IASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHE HPGVQDMACDTFLKIAQKCKRKFV  Q  EQ  FIEELL QLPTIVSDLETHQ 
Sbjct:  375 AEGRTAAYKGILSRIRHVLIMRMSKPEEVLIVEDENGEIVRETTRDTEAIAQYKTMRETLVYLTHLHYEDTESIMLNKLCLQVDGREFSWNNLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCEMKRGKDNKAVIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHETHPGVQDMACDTFLKIAQKCKRKFVVTQVGEQMPFIEELLQQLPTIVSDLETHQV 603
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BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: A0A5D6Y1Y4_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Y4_9STRA)

HSP 1 Score: 374 bits (960), Expect = 2.870e-117
Identity = 181/226 (80.09%), Postives = 201/226 (88.94%), Query Frame = 1 
Query:   19 RKAAYKGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQA 696
            R++    ++TR RHV+I++M KP EVL+VEDENGE+VRETTKDTEA++QYKTM ETLVYLTHL+Y+DTE IMLEKL  QVDG E+SWT LNTLCWAIGSISGAMSEE EKRFLVTVIKDLL LCE KRGKDNKA++ASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKC+RKFV  Q  E + F+EELL +LP IVSDLETHQ 
Sbjct:  401 RRSLVAPVMTRVRHVMISKMVKPSEVLIVEDENGEIVRETTKDTEALSQYKTMHETLVYLTHLNYDDTETIMLEKLTAQVDGSEWSWTRLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQAGEARPFVEELLDELPRIVSDLETHQV 626
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BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: A0A8J2X2G4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2G4_9STRA)

HSP 1 Score: 371 bits (953), Expect = 4.630e-116
Identity = 183/231 (79.22%), Postives = 209/231 (90.48%), Query Frame = 1 
Query:   10 ANPRKAAYK--GILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQA 696
            A+PRK  ++  G+L++ R V+I+RMAKPEEVLVVEDENGE+VRET KDTEAI Q+KTMRETLVYLTHL+Y+DTE+IML+KLALQVDG E+SW +LNTLCWA+GSISGAMSE+EEKRFLVTVIKDLL LCE KRGK NKA IASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVT Q +E + F+++L+ QLP I+SDLE HQ 
Sbjct:  426 ADPRKQLFQHGGLLSQARLVMISRMAKPEEVLVVEDENGEIVRETFKDTEAIVQHKTMRETLVYLTHLNYDDTESIMLDKLALQVDGTEWSWANLNTLCWAVGSISGAMSEDEEKRFLVTVIKDLLGLCEVKRGKGNKACIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTQQPAEPRPFVQDLVAQLPQIISDLEPHQV 656
[Close]
BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: M4BY55_HYAAE (Importin N-terminal domain-containing protein n=27 Tax=Oomycota TaxID=4762 RepID=M4BY55_HYAAE)

HSP 1 Score: 368 bits (945), Expect = 1.020e-115
Identity = 177/226 (78.32%), Postives = 199/226 (88.05%), Query Frame = 1 
Query:   19 RKAAYKGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQA 696
            R+     ++ R RHV+I++M KP EVL+VEDENGE+VRETTKDTEA++QYKTM ETLVYLTHL+Y+DTE IMLEKL  QV+G E+SW +LNTLCWAIGSISGAMSEE EKRFLVTVIKDLL LCE KRGKDNKA++ASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKI+QKC+RKFV  Q  E + F+EELL +LP IVSDLETHQ 
Sbjct:  326 RRDLVSPVMNRVRHVMISKMVKPSEVLIVEDENGEIVRETTKDTEALSQYKTMHETLVYLTHLNYDDTETIMLEKLTAQVEGTEWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQKCRRKFVVLQSGETRPFVEELLEELPRIVSDLETHQV 551
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BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: A0A3L6V416_9STRA (CRM1_C domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V416_9STRA)

HSP 1 Score: 358 bits (920), Expect = 4.120e-115
Identity = 176/225 (78.22%), Postives = 197/225 (87.56%), Query Frame = 1 
Query:   19 RKAAYKGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQ 693
            RK+  K IL+R R V+I++M KP EVL+VEDENGE+VRETTKDTEA++QYKTM E LVYLTHLDY+DTE IMLEKL  QV+G  +SW +LNTLCWAIGSISGAMSEE EKRFLVTVIKDLL LCE KRGKDNKA++ASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQKC+RKFV  Q  E   F+EEL+++LP  VSDLE HQ
Sbjct:  221 RKSLLKVILSRLRVVMISKMVKPSEVLIVEDENGEIVRETTKDTEALSQYKTMHEGLVYLTHLDYDDTENIMLEKLTDQVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQPGEPYPFVEELMMELPKTVSDLEPHQ 445
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BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 4.750e-115
Identity = 183/235 (77.87%), Postives = 204/235 (86.81%), Query Frame = 1 
Query:    4 ANANPRKAAYKGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVD--GREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQACE 702
            A  + R+  Y+ +LT+ R V+ITRMAKPEEVL+VEDENGEVVRETTKDTEAIAQYK+MRETLVYLTHL+ +DTE IMLEKL+ QV+  G +F+W SLNTLCWAIGSISGAM+EEEEKRFLVTVIKDLLNL E KRGKDNKA++ASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKI+QKCK KF+  Q  E   F+EELL QL   VSDLETHQ  +
Sbjct:  219 AGTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDENGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSKQVEVSGSQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQKCKGKFMATQVGESIPFVEELLRQLHATVSDLETHQITK 453
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BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: A0A397C6E5_9STRA (CRM1_C domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C6E5_9STRA)

HSP 1 Score: 358 bits (920), Expect = 9.690e-115
Identity = 176/225 (78.22%), Postives = 197/225 (87.56%), Query Frame = 1 
Query:   19 RKAAYKGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQ 693
            RK+  K IL+R R V+I++M KP EVL+VEDENGE+VRETTKDTEA++QYKTM E LVYLTHLDY+DTE IMLEKL  QV+G  +SW +LNTLCWAIGSISGAMSEE EKRFLVTVIKDLL LCE KRGKDNKA++ASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQKC+RKFV  Q  E   F+EEL+++LP  VSDLE HQ
Sbjct:   76 RKSLLKVILSRLRVVMISKMVKPSEVLIVEDENGEIVRETTKDTEALSQYKTMHEGLVYLTHLDYDDTENIMLEKLTDQVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQPGEPYPFVEELMMELPKTVSDLEPHQ 300
[Close]
BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: A0A7S2AWL8_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWL8_9STRA)

HSP 1 Score: 366 bits (940), Expect = 3.560e-114
Identity = 182/231 (78.79%), Postives = 202/231 (87.45%), Query Frame = 1 
Query:    7 NANPRKAAY-KGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQA 696
            N + RK  Y + +L+R R V+I  MAKPEEVLVVEDENG+V+RE  KDTE IAQYKTMRETLVYLTHL+Y+DTEAIMLEKL+ QVDG  +SW +LNTLCWAIGSISGAMSEEEEKRFLV VIKDLL LCE+KRGKDNKA+IASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIA KCKRKFVT QQ+E+Q FI EL   +P+I+S LE HQ 
Sbjct:  401 NGSSRKHLYQRDLLSRVRSVMIANMAKPEEVLVVEDENGDVIREIQKDTEVIAQYKTMRETLVYLTHLNYDDTEAIMLEKLSAQVDGSSWSWNNLNTLCWAIGSISGAMSEEEEKRFLVIVIKDLLGLCEDKRGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAHKCKRKFVTLQQNEEQPFIMELAQMVPSIISHLEAHQV 631
[Close]
BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: A0A397DQY2_9STRA (Importin N-terminal domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DQY2_9STRA)

HSP 1 Score: 358 bits (920), Expect = 3.900e-114
Identity = 176/225 (78.22%), Postives = 197/225 (87.56%), Query Frame = 1 
Query:   19 RKAAYKGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQ 693
            RK+  K IL+R R V+I++M KP EVL+VEDENGE+VRETTKDTEA++QYKTM E LVYLTHLDY+DTE IMLEKL  QV+G  +SW +LNTLCWAIGSISGAMSEE EKRFLVTVIKDLL LCE KRGKDNKA++ASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKIAQKC+RKFV  Q  E   F+EEL+++LP  VSDLE HQ
Sbjct:  292 RKSLLKVILSRLRVVMISKMVKPSEVLIVEDENGEIVRETTKDTEALSQYKTMHEGLVYLTHLDYDDTENIMLEKLTDQVEGNGWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCRRKFVVLQPGEPYPFVEELMMELPKTVSDLEPHQ 516
[Close]
BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Match: A0A024GRP6_9STRA (Importin N-terminal domain-containing protein n=14 Tax=Albugo TaxID=65356 RepID=A0A024GRP6_9STRA)

HSP 1 Score: 366 bits (939), Expect = 7.700e-114
Identity = 179/226 (79.20%), Postives = 198/226 (87.61%), Query Frame = 1 
Query:   19 RKAAYKGILTRTRHVLITRMAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTEAIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVSDLETHQA 696
            RK     IL++ RHV+I++M KP EVL+VEDENGE+VRETTKDTEA++QYKTM ETLVYLTHL+Y+DTE IMLEKL  QV+G E+SW +LNTLCWAIGSISGAMSEE EKRFLVTVIKDLL LCE KRGKDNKA++ASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKI+QKC+RKFVT Q  E   F+EELL  LP IVS LETHQ 
Sbjct:  454 RKDLVASILSQVRHVMISKMVKPSEVLIVEDENGEIVRETTKDTEALSQYKTMHETLVYLTHLNYDDTETIMLEKLTAQVEGTEWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQKCRRKFVTLQFKETCPFVEELLTALPKIVSHLETHQV 679
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8272.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZ33_9STRA3.830e-12988.21Exportin1 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A5D6Y1Y4_9STRA2.870e-11780.09Importin N-terminal domain-containing protein n=1 ... [more]
A0A8J2X2G4_9STRA4.630e-11679.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
M4BY55_HYAAE1.020e-11578.32Importin N-terminal domain-containing protein n=27... [more]
A0A3L6V416_9STRA4.120e-11578.22CRM1_C domain-containing protein (Fragment) n=5 Ta... [more]
D8LS67_ECTSI4.750e-11577.87CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A397C6E5_9STRA9.690e-11578.22CRM1_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S2AWL8_9STRA3.560e-11478.79Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A397DQY2_9STRA3.900e-11478.22Importin N-terminal domain-containing protein (Fra... [more]
A0A024GRP6_9STRA7.700e-11479.20Importin N-terminal domain-containing protein n=14... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8272contigP-wetherbeei_contig8272:101..2587 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog325452.fgenesh_scip_prom.46568.7725
PFAMsCRM1_C,IBN_N,Xpo1
Model size1097
Max annot lvl4776|Peronosporales
KEGG koko:K14290
KEGG TC1.I.1
KEGG Pathwayko03008,ko03013,ko04013,ko05164,ko05166,ko05169,map03008,map03013,map04013,map05164,map05166,map05169
Hectar predicted targeting categoryother localisation
Exons5
Evalue4.49e-113
EggNOG OGsCOG5101@1|root,KOG2020@2759|Eukaryota,3QAPV@4776|Peronosporales
DescriptionCRM1 C terminal
Cds size660
COG categoryUY
BRITEko00000,ko00001,ko03009,ko03016,ko03019,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8272.1.1prot_P-wetherbeei_contig8272.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8272 463..2512 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187030.6861055-UTR-P-wetherbeei_contig8272:100..4621683187030.6861055-UTR-P-wetherbeei_contig8272:100..462Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8272 101..462 -
1683187030.7625506-UTR-P-wetherbeei_contig8272:2512..25871683187030.7625506-UTR-P-wetherbeei_contig8272:2512..2587Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8272 2513..2587 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187030.7013028-CDS-P-wetherbeei_contig8272:462..6091683187030.7013028-CDS-P-wetherbeei_contig8272:462..609Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8272 463..609 -
1683187030.7151983-CDS-P-wetherbeei_contig8272:1002..12181683187030.7151983-CDS-P-wetherbeei_contig8272:1002..1218Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8272 1003..1218 -
1683187030.7270007-CDS-P-wetherbeei_contig8272:1629..17461683187030.7270007-CDS-P-wetherbeei_contig8272:1629..1746Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8272 1630..1746 -
1683187030.7380207-CDS-P-wetherbeei_contig8272:2134..22951683187030.7380207-CDS-P-wetherbeei_contig8272:2134..2295Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8272 2135..2295 -
1683187030.7520776-CDS-P-wetherbeei_contig8272:2493..25121683187030.7520776-CDS-P-wetherbeei_contig8272:2493..2512Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8272 2494..2512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8272.1.1

>prot_P-wetherbeei_contig8272.1.1 ID=prot_P-wetherbeei_contig8272.1.1|Name=mRNA_P-wetherbeei_contig8272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=220bp
MAKPEEVLVVEDENGEVVRETTKDTEAIAQYKTMRETLVYLTHLDYEDTE
AIMLEKLALQVDGREFSWTSLNTLCWAIGSISGAMSEEEEKRFLVTVIKD
LLNLCENKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFM
HELHPGVQDMACDTFLKIAQKCKRKFVTAQQSEQQAFIEELLVQLPTIVS
DLETHQACEGKNGKKFPGG*
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mRNA from alignment at P-wetherbeei_contig8272:101..2587-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8272.1.1 ID=mRNA_P-wetherbeei_contig8272.1.1|Name=mRNA_P-wetherbeei_contig8272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2487bp|location=Sequence derived from alignment at P-wetherbeei_contig8272:101..2587- (Phaeothamnion wetherbeei SAG_119_79)
CTGGCGAACGCCAACCCGCGCAAGGCGGCCTACAAGGGCATCCTCACGCG
GACGCGCCACGTCCTCATCACGCGCATGGCCAAGCCCGAGGAGGGTCAGT
GACCTTTATGTCATTGCCTTGGTGGTGGTGCAGTTTTAAAGTTGTCTTCA
CAGTTCCACTAGACCTGGATGCCCAGTTCTGTTCTTCTTTCCGTGTTTTA
AAGACAGTCTGCACACGACTGCCAGAGCTGGATCGCCCATCTCAATCCTC
TCTTTCCCTCTCCTTTCACACTCCCCCGACTCGGCTTTTCAGTTCTGGTG
GTGGAGGACGAGAACGGCGAGGTGGTGCGCGAGACGACGAAGGACACGGA
GGCCATCGCACAGTACAAGACCATGCGGGAGACGCTCGTCTACCTGACGC
ACCTCGACTACGAGGACACTGAGGCCATCATGCTCGAGAAGCTCGCGCTG
CAGGTGTGTTAGATGGGTACACATTGACCGAGGTGGAGTTTCAGGAGCCC
CATATTTGAGAGAGAGACGTATTGAACCTTTGTTCTTTTCTGTCCGCTGG
TCATTCTCACGATGTGAGCGTAGCGGTCCAGGTTTCTTCCCAGCAAAGAA
CAAAACCTGAGGCGCTTGAAGCCGCCTTGTCTTCTCCTTGCGCGTCTCGG
TTTCATTTCCCTTCGGTCACCTTTCTTTTTCCTTTCTCTTCCGCTCCTTC
GTTGCGGCTCTGCGGCGTATGGCACTCCCTCCTTGCGACGCTGCAATACC
CGGCGGCGGCGGCGGCGATGACCACTGCGATGGCGGTGGCGACAATGATG
GCGGCCGCGATGGCTCGATGGCGGTGACGTCTCAAAAACAGGTGGATGGG
CGTGAGTTCTCGTGGACGAGCCTCAATACGCTGTGCTGGGCCATAGGCTC
CATCAGCGGCGCCATGAGCGAGGAGGAGGAGAAGCGGTTCCTCGTCACCG
TCATCAAGGTCAGCTAGCTACTAGCGCTTGGGAAGGGCTTGTTCTTGCTG
GTTTGCTCTTGGTGGCTTTGATTTGCGCTTGAGACGCTGCTCGTTTCCTC
CTTCAGAAGGGAAGGCATGCTCTCCTCTACTTCTGCGCTGCTTTTTCTCC
GTCTGTGCAAGTCATTCGTCTGCGCGTTCTCTCGCCAGCCGTCCACTTGT
GTGCCAGCCCGCCCAGCTCCTTCGGATCTGTGCGAGTCCAGGCACCGTCT
TCACCCCTACTTCGTGTCCCTTCTTTCTTTGCAGCTCTTTTCTCACACGT
TCTTCTTTCCAATTCTTCTTAGCCGCTTTTAACCTCCCCCTGCTCTCCCT
GCTTCTCGGCAACGAAACGGCTACGACGAAATGTAAACGGCGATGAAACC
GCAACCTATTTTTTAACAGGACCTGCTGAACCTGTGCGAGAACAAGCGGG
GCAAGGACAACAAGGCCATCATCGCGTCCAACATCATGTATGTGGTGGGG
CAGTACCCGCGCTTCCTGCGCGCACACTGGAAGTTCCTCCGGACGGTAGT
CAACAAGCTCTTCGAGTTCATGCACGAGCTCCACCCGGGGGTGCAGGACA
TGGCCTGCGACACTTTCCTCAAGATCGCGCAGAAGGTCCGGTCAGGAGTA
GTGCGTTAATGCAGCCGACGGGTCTGGCGGTACTGCGTGCTGTGCTGTTT
TCCGTTTTGCGGTGCAGTTTGCGCAGCCGTTTGCAGTGCAGTATGCCGCA
GTTCACGAAGCTATGAGGTGTTTGCGTTGCAGGGCTGCAGCAGGCATAAG
CCGCCATGCGCTTCCGTTGCTCTGTGTGTGGTCTGCATCAGTCTTTATCG
ATGTCTTGTTGTTACTCGGATGCTTCTTGGGAAGGCAGGCGCTCTGGCCT
TTCGTGATCTTTACTGACCGGCCTCCCGCGTTCGTCGGTCTCGCTTCTGG
CTTTGTTGTCGTTCGATTCGTTATTGTGGCCGCTGAACCGCCCAAACTTG
TTGCGACAAACTGGTACATACCATACAGTGCAAGCGAAAGTTCGTGACGG
CGCAGCAATCGGAGCAGCAGGCCTTCATCGAGGAGCTCCTTGTGCAACTC
CCCACCATCGTCTCCGACCTCGAGACGCACCAGGCATGTGAAGGAAAAAA
CGGAAAGAAATTTCCGGGTGGATAAGAGAACTGAAACTGGACGATGACGT
CTGCAAAAGCATATGGTGGCTGTTCGCTGTCGGATGACTCTCTCAACGGT
TTTCCACATTCTTCCCCCCTTCATGCCTGTTTCTCGTTTCTTTGCCCATC
CTTTCGTCCTGTTCTCTCCGCCGCTGTCTGTCTTGCCTTGTGGTCCCATA
TTCCATCCTGCGTCGCCAGGTGCACACGTTCTACGAGGCGGTGGGGTGCA
TGCTGAGTGACAGGGGCAGCGCCGTCAGCGTCGACCGGGAGGCGCTGCTG
CAGAAGCTCATGGAGCTGCCCAACGCCGGCTGGAAGCACATCTTCCAGCA
GGCCCAGGCGAGTTTGCGCACCACAGTGGAAGCAAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8272:101..2587-

>mRNA_P-wetherbeei_contig8272.1.1 ID=mRNA_P-wetherbeei_contig8272.1.1|Name=mRNA_P-wetherbeei_contig8272.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig8272:101..2587- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCAAGCCCGAGGAGGTTCTGGTGGTGGAGGACGAGAACGGCGAGGT
GGTGCGCGAGACGACGAAGGACACGGAGGCCATCGCACAGTACAAGACCA
TGCGGGAGACGCTCGTCTACCTGACGCACCTCGACTACGAGGACACTGAG
GCCATCATGCTCGAGAAGCTCGCGCTGCAGGTGGATGGGCGTGAGTTCTC
GTGGACGAGCCTCAATACGCTGTGCTGGGCCATAGGCTCCATCAGCGGCG
CCATGAGCGAGGAGGAGGAGAAGCGGTTCCTCGTCACCGTCATCAAGGAC
CTGCTGAACCTGTGCGAGAACAAGCGGGGCAAGGACAACAAGGCCATCAT
CGCGTCCAACATCATGTATGTGGTGGGGCAGTACCCGCGCTTCCTGCGCG
CACACTGGAAGTTCCTCCGGACGGTAGTCAACAAGCTCTTCGAGTTCATG
CACGAGCTCCACCCGGGGGTGCAGGACATGGCCTGCGACACTTTCCTCAA
GATCGCGCAGAAGTGCAAGCGAAAGTTCGTGACGGCGCAGCAATCGGAGC
AGCAGGCCTTCATCGAGGAGCTCCTTGTGCAACTCCCCACCATCGTCTCC
GACCTCGAGACGCACCAGGCATGTGAAGGAAAAAACGGAAAGAAATTTCC
GGGTGGATAA
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