mRNA_P-wetherbeei_contig827.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig827.3.1
Unique NamemRNA_P-wetherbeei_contig827.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: A0A6H5L6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G6_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 1.790e-121
Identity = 198/377 (52.52%), Postives = 248/377 (65.78%), Query Frame = 1
Query:   10 LRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARGTLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTRP 1140
            LRPYQ   +    +   +G RR+L P+ATGLGKT VF +LP  FP+L  RGTLVLVHRDELV+QAV +F +  PHLSVGVEKG + +   +DV+VASVQ+L RRGSG  RL+K+  A +GG+V+VDEAHH+K GG YDDVL   G+GSA                       R E  G   R+LAGFTATP R DG SLRPFFD  +    L WG+ANG+L DI A++V+T TD++ +PTR  +F++G L+ AV+ND RN A ARA+++F   +   SR+    R + FC  V HAH LA  L  H I+A A+D     + R R LA FR G +  L N GVLTEGFDAP+CDT+VMCRP  S  LYMQM+GRGTRP
Sbjct:   17 LRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGNETAHAGLDVVVASVQTLGRRGSGAARLRKF--ANYGGVVVVDEAHHVKAGGMYDDVLNGLGVGSA----------------------CRGETRGG--RLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSAGALSTAVNNDVRNEAAARAMLEFGAGEPLSSRKKKSPRGIAFCVDVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPSCDTIVMCRPTQSAPLYMQMIGRGTRP 367          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: A0A835YHM4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM4_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.410e-78
Identity = 194/496 (39.11%), Postives = 258/496 (52.02%), Query Frame = 1
Query:   10 LRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARGTLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLA-RRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYS-------------------------VKTVTDLSLIPTRAG--EFASGPLAAAVDNDARNAAVARAL---------------IDFSGN-------------KDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTE--------GFDAPACDTVVMCRPVLSKALYMQMLGRGTRPIVNV-----NGAG-LDIASRAALIARSVKPHMKLIDFVDNCGRHKVVDMADVVGL 1287
            LRPYQ E L   K    +G  RIL PMATG+GKT VF ++P  FP+LA RGTLVLVHR+ELVRQA     +    L VG+E   +RS    D +VASVQ+L  RRG+G     + +     G+VIVDEAHH+ E G Y+ +L   G  ++QA+R     +   A   G  S    +  G A  ++AGFTATP R DG +L PFFDA+     L WG+  G L +I+  +                           + TD+ +  +  G  +F S  L+AAV+  ARN A+ RAL               +   G+             + A+++       L FCASV HAH LA  L   G+ A A+D +TP E RR ++  FR G L  + N GV TE        GFDAP  +TVVM RP +S+ L+MQM+GRGTRP   V     +  G +    R + I +S KP M+L+D VDNCG+HKV     V+GL
Sbjct:   20 LRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRCG--LKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILN--GETNSQAVRAVLTPE---AFELGMGSKCGGKTRGGA--LVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGL 506          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: D8LIE4_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE4_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 7.360e-75
Identity = 142/305 (46.56%), Postives = 181/305 (59.34%), Query Frame = 1
Query:  418 YDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTRPIVNVN-----------GAGLDIASRAALIARSVKPHMKLIDFVDNCGRHKVVDMADVVGLARGF 1299
            YDDVL   G+GSA                       R E  G   R+LAGFTATP R DG SLRPFFD  +    L WG+ANG+L DI A++V+T TD++ +PTR  +F++G L+ AV+ND RN A ARA+++F   + + S +    R + FCA V HAH LA  L  H I+A A+D     + R R LA FR G +  L N GVLTEGFDAP CDT+VMCRP  S  LYMQM+GRGTRP ++             GA    + R + IA S KP M +ID VDNCG+HKV+ M+  +GL+ GF
Sbjct:    2 YDDVLNGLGVGSA----------------------CRGETRGG--RLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQDFSAGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKKSPRGIAFCADVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTEGFDAPYCDTIVMCRPTQSAPLYMQMIGRGTRPWLSPTPQVRPANNADAGADSTASRRRSDIAASPKPRMHVIDLVDNCGKHKVMSMSAALGLSSGF 282          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: UPI000404CBD0 (DEAD/DEAH box helicase n=1 Tax=Thermicanus aegyptius TaxID=94009 RepID=UPI000404CBD0)

HSP 1 Score: 212 bits (540), Expect = 2.900e-59
Identity = 151/428 (35.28%), Postives = 211/428 (49.30%), Query Frame = 1
Query:   10 LRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARG--TLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTRPIVNVNGAGLDIASRAALIARSVKPHMKLIDFVDNCGRHKVVDMADVVGL 1287
            LR YQ +AL   +KA  RG ++ +  +ATGLGKT VF  L      L  RG   LVL HRDEL++QA    + ++P   +GV K  +R+  D D++VAS+QSL       KRLK++    F   V++DEAHH     SY  V+  F                                    P +L G TATP+RGD  +L   FD +V   G+  G+ N +L DI AY V+T  DL  + T AG+F  G L+  V+   RN A+ +A + ++  K          +A+VF   + HA +L       GI A  +   TP E RR +L G + G +  + NV VLTEGFD P+ + V++ RP  S AL+ QM+GRGTR                       K  + L+D  DN  RH+VV + ++VGL
Sbjct:    4 LRDYQEQALEAIEKALARGVKKQVLNLATGLGKTIVFAEL------LRRRGKTALVLAHRDELIQQAEDKIRLVYPEAEIGVVKA-ERNEKDADIVVASIQSLHE-----KRLKQWEPDRFH-TVVIDEAHHAIAP-SYKRVIDYFN-----------------------------------PELLLGVTATPFRGDRVTLAKVFDEVVYSYGILEGIRNQYLVDIEAYRVQTNVDLDSVKTNAGDFNLGELSERVNVADRNEAIVQAYVQYAPGK----------KAIVFAVDIEHAVSLTEIFRRAGINAAFVHGGTPKEERREVLDGLKTGEIPVVVNVSVLTEGFDEPSVEVVILARPTKSLALFTQMVGRGTR-------------------LHPDKERLILLDIADNTKRHRVVSVMEMVGL 353          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: A0A2R6Y0D7_9BACL (Uncharacterized protein n=1 Tax=Candidatus Carbobacillus altaicus TaxID=2163959 RepID=A0A2R6Y0D7_9BACL)

HSP 1 Score: 211 bits (536), Expect = 1.120e-58
Identity = 148/428 (34.58%), Postives = 215/428 (50.23%), Query Frame = 1
Query:   10 LRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARG--TLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTRPIVNVNGAGLDIASRAALIARSVKPHMKLIDFVDNCGRHKVVDMADVVGL 1287
            LRPYQ EAL+  ++A  RG RR +  +ATGLGKT VF  L      L  RG   +V+ HRDEL+RQAV+  + + PH  +G+ K  + +  D  ++VAS+QSL       KRL++++   F   +++DEAHH     SY  V   F                                    P +L G TATP+RGD  +L   FD +V   G+  G+ +G+L DI AY ++T  +L  + T AG+F+   L  A++ + RN  V  A    +  K          + ++F A V HA  L     A GI A A+   TP + RR +L  FR G +  L NVGVLTEGFD P+ + V++ RP  S+ LY QM+GRGTR                       K  + LID VD+  RH+++ +++++G+
Sbjct:   15 LRPYQEEALSAIEEAYTRGIRRPVVALATGLGKTIVFSEL------LRRRGDTAMVIAHRDELIRQAVEKIRFVIPHAEIGIVKA-EENQKDAQIVVASIQSLHE-----KRLRQWMPDRFA-TIVIDEAHHAIAP-SYRRVAEYF-----------------------------------RPDILLGVTATPFRGDRITLAEVFDDVVYSFGIVDGIRSGYLADIEAYRIETDINLDHVRTMAGDFSEKELIQAINTEERNQIVVHAYQHHADGK----------KTIIFAAGVPHAMQLVDRFRAVGIPADAVFGHTPVQERRSILERFRTGLVPVLVNVGVLTEGFDEPSVEAVILARPTKSRVLYTQMVGRGTR-------------------LSPGKDRLILIDVVDSTTRHRLISISELIGV 364          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: A0A1Q7G082_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium 13_1_40CM_56_16 TaxID=1803458 RepID=A0A1Q7G082_9BACT)

HSP 1 Score: 192 bits (489), Expect = 1.410e-53
Identity = 131/376 (34.84%), Postives = 180/376 (47.87%), Query Frame = 1
Query:   10 LRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARGTLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTR 1137
            LRPYQ EAL   + A +   RR++  + TG GKT VF + P V      +  LVL HR+EL+ QA   F+ + P L   +E+   R+  D  V++ASV +LAR G+   RL +     F  +V+VDEAHH     SY  +   FGL                                   R L GFTATP RGD   L   F+ +   R +R  +A  +LC I  + + T   L  +  R G+F    LA  V+   RN  + +A  DF+  +          RA++FC  V+HA  +    +  GI A  +      + RR +LA F  G +D + N  +LTEGFD P  D V+M RP  SK LY QM+GRGTR
Sbjct:   16 LRPYQSEALNAVRDAYKADKRRVIVSLPTGTGKTVVFAHFPRVLK--MKKRLLVLAHREELLLQAQDKFRSIDPELKAEIEQAGARAAADAKVVIASVPTLARNGA---RLARLHPDEFS-IVVVDEAHHAVAP-SYRRIFDHFGL-----------------------------FEPGVSRYLIGFTATPRRGDKQGLGEVFEEVCYARDMREMIACRYLCPITGWRIDTDLSLDNVKVRHGDFVESQLARVVNTPLRNTLLVKAYRDFAAGR----------RAIIFCVDVAHAQDVHRAFDEAGIRAAPVWGELSRDERRNVLAEFSAGKIDVVTNCNLLTEGFDEPRVDCVIMARPTRSKLLYAQMIGRGTR 345          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: A0A2V8MTW3_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8MTW3_9BACT)

HSP 1 Score: 195 bits (496), Expect = 4.220e-53
Identity = 137/379 (36.15%), Postives = 186/379 (49.08%), Query Frame = 1
Query:    1 MRGLRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARGTLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTR 1137
            M GLR YQ +AL   ++A + G RR++  + TG GKT VF + P V      +  LVL HR+EL++QA   F+ + P L V +E+   R+  D  V+VASV +LAR G+   RL +     F  +++VDEAHH     SY  +   FGL               P T                 R L GFTATP RGD   L   F+ +   R LR  +A G+L  I  + V T   L  +  + G+F    LA  V+  ARN  +  A  + +  +          RA+VFC  V+HA  +       GI + A+    P + RR  LA F  G +D + N  +LTEGFD P  D V+M RP  SK LY QM+GRGTR
Sbjct:    1 MLGLRSYQRDALVRVREAYKAGKRRVIVSLPTGTGKTVVFAHFPSVLK--MKKRLLVLAHREELLQQAHDKFRAIDPELKVEIEQAGTRASADAKVVVASVPTLARGGT---RLAQLPPDDFS-IIVVDEAHHAVAP-SYRRIFDHFGLLD-------------PGTV----------------RYLVGFTATPRRGDNQGLGEVFEEVCYARDLREMIAEGYLSRIRGWRVDTDLSLDGVKVQHGDFVESQLARVVNTPARNNLLVTAYRELADGR----------RAIVFCVDVAHAQNVHRAFSQAGIRSAAVWGELPKDERRATLAAFSSGEIDVVTNCNLLTEGFDEPRVDCVMMARPTRSKLLYAQMVGRGTR 333          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: A0A1Q7S1S1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium 13_1_40CM_2_56_11 TaxID=1803440 RepID=A0A1Q7S1S1_9BACT)

HSP 1 Score: 193 bits (490), Expect = 2.460e-52
Identity = 130/376 (34.57%), Postives = 180/376 (47.87%), Query Frame = 1
Query:   10 LRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARGTLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTR 1137
            LRPYQ EAL   + A +   RR++  + TG GKT VF + P V      +  LVL HR+EL+ QA   F+ + P L   +E+   R+  D  V++ASV +LAR G+   RL +   +    +V+VDEAHH     SY  +   FGL                                   R L GFTATP RGD   L   F+ +   R +R  +A  +LC I  + + T   L  +  R G+F    LA  V+   RN  + +A  DF+  +          RA++FC  V+HA  +    +  GI A  +      + RR +LA F  G +D + N  +LTEGFD P  D V+M RP  SK LY QM+GRGTR
Sbjct:   16 LRPYQSEALNAVRDAYKADKRRVIVSLPTGTGKTVVFAHFPRVLK--MKKRLLVLAHREELLLQARDKFRSIDPELKAEIEQAGARAAADAKVVIASVPTLARNGARLARLHRDEFS----IVVVDEAHHAVAP-SYRRIFDHFGL-----------------------------FEPGVSRYLIGFTATPRRGDKQGLGEVFEEVCYARDMREMIACRYLCPITGWRIDTDLSLDNVKVRHGDFVESQLARVVNTPLRNTLLVKAYRDFAAGR----------RAIIFCVDVAHAQDVHRAFDEAGIRAAPVWGELSRDERRNVLAQFSAGKIDVVTNCNLLTEGFDEPRVDCVIMARPTRSKLLYAQMIGRGTR 345          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: A0A2N2I3V8_9DELT (ATP-dependent helicase (Fragment) n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20 TaxID=2013748 RepID=A0A2N2I3V8_9DELT)

HSP 1 Score: 189 bits (479), Expect = 8.100e-52
Identity = 148/430 (34.42%), Postives = 198/430 (46.05%), Query Frame = 1
Query:   10 LRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARGTLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTRPIVNVNGAGLDIASRAALIARSVKPHMKLIDFVDNCGRHKVVDMADVVGLARGF 1299
            LRPYQ E L+   +    G RR+L  + TG GKT +F   P  F     R  LVL HR EL+ QA+  F+ +   LSVG+E+   RS  D  V++ASVQ+L       KRL       F  LV+VDEAHH     SY  +    G+               P T                P++L GFTATP RGD   L   F+ I   RGL   + +GFLC I  + V++   L  +  RAG+F    LA AVDN  RN      L+  +  K A  RR      +VFC +V HA  +A      G  + A+  +   + R  +L     G LD + N  VLTEGFD P+ D V+M RP  S  LY+QM+GRGTR                     + K  + +ID  DN  +H++  +  +  L  G 
Sbjct:   21 LRPYQQECLSVLGQRYLAGGRRLLVSLPTGTGKTVIFSQFPRHFR--MKRRLLVLAHRRELLDQALAKFRDVDDTLSVGIEQA-DRSARDAQVVLASVQTLQG-----KRLAALAPEQFN-LVVVDEAHHAVAP-SYRLIFEHLGM-------------FAPGT----------------PKLLVGFTATPRRGDKQGLGQVFEEIAYSRGLEEMIRDGFLCPIRGWRVRSGVSLDAVKVRAGDFVESALAEAVDNAPRND-----LLTGAYEKLAKGRR-----CIVFCVNVQHAQNVACAFRKAGFRSQAVWGAMGSQQRANVLRELARGELDVVTNCNVLTEGFDEPSVDCVLMARPTRSLGLYVQMVGRGTR-------------------LHAGKGDLLVIDIADNTRKHELAGLGALFDLPEGM 382          
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Match: A0A2V8ZVD1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8ZVD1_9BACT)

HSP 1 Score: 192 bits (489), Expect = 8.560e-52
Identity = 137/376 (36.44%), Postives = 181/376 (48.14%), Query Frame = 1
Query:   10 LRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDLAARGTLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVASVQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLGSAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGSSLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFASGPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAHALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGFDAPACDTVVMCRPVLSKALYMQMLGRGTR 1137
            LR YQ EAL     A   G RR++  + TG GKT VF + P V      +  LVL HR+EL+ QA   F+ + P L V +E+   R+  D  V++ASV +LAR G+   RL+    +    +V+VDEAHH     SY  +   FGL                                   R L GFTATP RGD   L   F  +   R +R  +A+ +LC I  + V +   L  +  R G+F    LA AV+   RN+ + +A  DF+         PG  RA+VFC  V+HA  +       GI A  +  +   + RR  LA F  G +D + N  VLTEGFD P  D V+M RP  SK LY QMLGRGTR
Sbjct:   12 LRAYQSEALNAVCDAYRSGKRRVIVSLPTGTGKTVVFAHFPRVLK--MKKRLLVLAHREELLLQARDKFRSIDPELKVEIEQAGSRAADDAKVVIASVPTLARSGARLSRLQPDEFS----IVVVDEAHHAVAP-SYRRIFDHFGL-----------------------------FEPNVSRYLIGFTATPRRGDKQGLGEVFQEVCYARDMREMIADRYLCPITGWRVASDLSLDHVKVRHGDFIESQLAHAVNIPLRNSLLVKAYRDFA---------PGR-RAIVFCVDVAHAKDVHRVFAEAGIRAATVWGALSRDQRRSTLAAFSAGEIDVVTNCNVLTEGFDEPRVDCVIMARPTKSKLLYAQMLGRGTR 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig827.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6G6_9PHAE1.790e-12152.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YHM4_9STRA1.410e-7839.11P-loop containing nucleoside triphosphate hydrolas... [more]
D8LIE4_ECTSI7.360e-7546.56Helicase C-terminal domain-containing protein n=1 ... [more]
UPI000404CBD02.900e-5935.28DEAD/DEAH box helicase n=1 Tax=Thermicanus aegypti... [more]
A0A2R6Y0D7_9BACL1.120e-5834.58Uncharacterized protein n=1 Tax=Candidatus Carboba... [more]
A0A1Q7G082_9BACT1.410e-5334.84Uncharacterized protein (Fragment) n=1 Tax=Acidoba... [more]
A0A2V8MTW3_9BACT4.220e-5336.15Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A1Q7S1S1_9BACT2.460e-5234.57Uncharacterized protein (Fragment) n=1 Tax=Acidoba... [more]
A0A2N2I3V8_9DELT8.100e-5234.42ATP-dependent helicase (Fragment) n=1 Tax=Deltapro... [more]
A0A2V8ZVD1_9BACT8.560e-5236.44Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig827contigP-wetherbeei_contig827:5667..8316 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LIE4
Preferred nameirc3
PFAMsHelicase_C,ResIII
Model size1299
Max annot lvl2759|Eukaryota
KEGG koko:K17677
Hectar predicted targeting categoryother localisation
GOsGO:0000002,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022613,GO:0031974,GO:0031981,GO:0032042,GO:0033676,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360
Exons6
Evalue1.21e-75
EggNOG OGsCOG1061@1|root,2QT4U@2759|Eukaryota
Ec32 ortholog descriptionHelicase
Ec32 orthologEc-18_003980.5
DescriptionDEAD DEAH box helicase
Cds size1299
COG categoryKL
BRITEko00000,ko01000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig827.3.1prot_P-wetherbeei_contig827.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig827 5667..8316 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187030.5804424-CDS-P-wetherbeei_contig827:5666..59061683187030.5804424-CDS-P-wetherbeei_contig827:5666..5906Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig827 5667..5906 +
1683187030.6075983-CDS-P-wetherbeei_contig827:6283..64041683187030.6075983-CDS-P-wetherbeei_contig827:6283..6404Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig827 6284..6404 +
1683187030.6238704-CDS-P-wetherbeei_contig827:6596..68821683187030.6238704-CDS-P-wetherbeei_contig827:6596..6882Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig827 6597..6882 +
1683187030.6348672-CDS-P-wetherbeei_contig827:7165..73591683187030.6348672-CDS-P-wetherbeei_contig827:7165..7359Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig827 7166..7359 +
1683187030.6454284-CDS-P-wetherbeei_contig827:7500..78801683187030.6454284-CDS-P-wetherbeei_contig827:7500..7880Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig827 7501..7880 +
1683187030.6555333-CDS-P-wetherbeei_contig827:8238..83161683187030.6555333-CDS-P-wetherbeei_contig827:8238..8316Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig827 8239..8316 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig827.3.1

>prot_P-wetherbeei_contig827.3.1 ID=prot_P-wetherbeei_contig827.3.1|Name=mRNA_P-wetherbeei_contig827.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=433bp
MRGLRPYQLEALAFGKKAAERGHRRILFPMATGLGKTHVFVNLPLVFPDL
AARGTLVLVHRDELVRQAVQTFKQLHPHLSVGVEKGIQRSGPDIDVLVAS
VQSLARRGSGPKRLKKYIAAGFGGLVIVDEAHHLKEGGSYDDVLTAFGLG
SAQALRRHRREQHGPATCDGANSALRTEMYGTAPRVLAGFTATPYRGDGS
SLRPFFDAIVPERGLRWGVANGFLCDIVAYSVKTVTDLSLIPTRAGEFAS
GPLAAAVDNDARNAAVARALIDFSGNKDAISRRPGLGRALVFCASVSHAH
ALAATLEAHGIAAGAIDASTPPEARRRLLAGFRDGALDALCNVGVLTEGF
DAPACDTVVMCRPVLSKALYMQMLGRGTRPIVNVNGAGLDIASRAALIAR
SVKPHMKLIDFVDNCGRHKVVDMADVVGLARGF
back to top

mRNA from alignment at P-wetherbeei_contig827:5667..8316+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig827.3.1 ID=mRNA_P-wetherbeei_contig827.3.1|Name=mRNA_P-wetherbeei_contig827.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2650bp|location=Sequence derived from alignment at P-wetherbeei_contig827:5667..8316+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGGGGCTGCGGCCATACCAGCTGGAAGCACTCGCCTTCGGCAAGAA GGCAGCCGAGCGCGGACATCGCCGCATCCTATTCCCCATGGCGACAGGTC TAGGCAAAACACATGTGTTCGTAAACCTTCCGCTCGTTTTTCCAGACCTT GCGGCGCGCGGGACGCTTGTGCTTGTGCACCGGGATGAGCTGGTTCGACA AGCGGTCCAGACATTTAAGCAACTACATCCTCACCTCTCTGTGAGGCTCA TCAATGCAGTGTTTCGCATGAGACTGCCATGAGAAGTTGACATCACTCTT TTATGACCGCAGCGCTTCAGGACCCTATGGCCAGCTTTGTGCCGTAAGAA TTGGTTTATTTCGCAGAGTTCCAGTGGGTGCCATATTAGAGAGCCGTTTC TGTCGTCCTCGCAGCCAAGAAGTCGGCTCTGCTCAAGAAGATAGTCCTTT CGTCACAATTGCACAAGACTTTTAGCATTTTTGCGATTCTAGTGTTTGAA TTGGGTAATCGATGGATCCAATTGTTTAATTCAGGCCTGCGCCATGATTT CACGAGGACGTGATGTTGACTACGACACTCTGTCTTAACGCTTTTTTTCC ACGCCCCGGTTTGACAGGTGGGCGTCGAAAAGGGGATCCAAAGATCGGGG CCAGACATCGATGTGCTGGTTGCGTCCGTTCAGTCGTTGGCCCGCCGCGG CTCCGGCCCCAAACGCCTTAAAAAATACATTGCTGCAGGTGCGTCTCGAT GGCCGATGGCATGAGCTTTCCGACAACTGAGGCGTTGTCTTATTTTTTAT AACTTCTAACTTGTTCATGGCGCGTTGATATCTCCGACTCTTAACTCTGA AATAATGGTTGCAACAGTTTAGTACCGTGTCTCACTTTCCTGGAGAAATT CACGCCATGACCGAATTTTTGTCACGCCAGGCTTTGGAGGCCTTGTAATT GTGGACGAAGCGCACCACCTCAAGGAAGGCGGCAGTTACGACGACGTGTT GACGGCTTTCGGGCTTGGCTCAGCGCAGGCACTGCGGCGCCACCGGCGCG AGCAGCACGGGCCGGCGACCTGTGACGGCGCGAACAGCGCGCTCCGGACG GAAATGTATGGCACCGCGCCCCGCGTCCTTGCCGGATTCACGGCGACGCC GTACCGGGGCGATGGGAGCTCGCTGCGCCCGTTTTTCGACGCGATCGTCC CCGAGCGCGGTCTCAGGTGCGCCGCAGCGATTGATCTCACTTTTTGGCTG TAATGTGTTTCGTACGCCGTTTCAGTCTGCTGCTTTTGTGCAAATGATTT GTTATTCTCGCGCTCCGAAATAGAAGAGCTCCAAAATAGGAATTACGCGC CCGACGATCCTCTCAGAGATGGGCACAAGCATGTTTAACGTCAGAGTGCT TTGCTGTGGTTCTATTTTGTTGAGTTCTGTGATGGATTGCAGCAGCAACG CCACTTTCCTTCCGCCTCTCTTCTATCTGCCCCTTGCCATGTATTTCAGA TGGGGAGTAGCCAACGGGTTTCTCTGTGATATCGTGGCATATTCTGTCAA AACTGTCACGGATCTGAGTCTCATTCCCACCAGAGCAGGCGAGTTTGCCA GCGGGCCACTTGCAGCTGCTGTGGACAACGATGCCCGCAATGCCGCCGTT GCACGTGCCCTGATTGACTTTTCAGGGAACAAGGACGCCATATGTATCAC GTTTGACAGCGGAAGAGATGGCAATGATGGCAGTGGCGGCAGCGGCCACG ACGGCGGCAACAAAAGCAGCAGGCATGTAAAGCCAATCGCCCCGATCATA GCGCCACCGATGCCCGGGGCAGCGGCAACGGGAGCGCGGCGCCCGGGATT GGGGCGCGCGCTCGTGTTCTGCGCCAGCGTTTCTCACGCCCACGCCCTTG CGGCGACGTTGGAAGCCCACGGCATCGCAGCGGGCGCCATCGACGCATCG ACGCCGCCCGAGGCGCGGCGGCGGCTGCTGGCCGGCTTCCGCGACGGCGC GCTGGACGCGCTATGTAATGTCGGCGTGCTCACGGAAGGCTTCGATGCGC CGGCCTGCGACACGGTGGTGATGTGCCGGCCTGTGCTGTCCAAGGCGCTC TATATGCAGATGCTGGGGCGCGGCACGCGGCCGATCGTCAACGTCAACGG CGCCGGCCTTGACATCGCCAGCCGGGCGGCGCTCATTGCGCGTTCCGTCA AACCGCACATGAAGGTGAGGTGGGGAAGGGACGTCTTGCCTTTGTTTTTA TTGGACTTGTGTTCCTAAACCTTTGAATGAACTTTGGTGGATGAATGGAG CGGTTAGCGAAAAGCAACGTTCCGCACTTTACCTCTCCCTCGACAGTCAC GGAGCTGCAATTACAGCAAGTTCCCTCCGTTTTATTTGGCCTTTCATCAG AATTAGTTTCGGCCCATTTTTCTTTCCCTGACCGTTCCACGCTCTGGCCT TCCTAAATAGAAAAAGTGTTATGTCATATCTCACTTGTGGAGTCCCTTGT GCTCTCTGGTTCTTTAAAGCTGCTTTAGTTCTACGCCAAGTGCTGTCTGC TGCCGCTTCTCCGTTGAACCAGCTCATCGATTTTGTAGACAATTGCGGGC GGCACAAGGTGGTGGACATGGCGGACGTTGTCGGGCTGGCCCGCGGCTTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig827:5667..8316+

>mRNA_P-wetherbeei_contig827.3.1 ID=mRNA_P-wetherbeei_contig827.3.1|Name=mRNA_P-wetherbeei_contig827.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1299bp|location=Sequence derived from alignment at P-wetherbeei_contig827:5667..8316+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGGGGCTGCGGCCATACCAGCTGGAAGCACTCGCCTTCGGCAAGAA
GGCAGCCGAGCGCGGACATCGCCGCATCCTATTCCCCATGGCGACAGGTC
TAGGCAAAACACATGTGTTCGTAAACCTTCCGCTCGTTTTTCCAGACCTT
GCGGCGCGCGGGACGCTTGTGCTTGTGCACCGGGATGAGCTGGTTCGACA
AGCGGTCCAGACATTTAAGCAACTACATCCTCACCTCTCTGTGGGCGTCG
AAAAGGGGATCCAAAGATCGGGGCCAGACATCGATGTGCTGGTTGCGTCC
GTTCAGTCGTTGGCCCGCCGCGGCTCCGGCCCCAAACGCCTTAAAAAATA
CATTGCTGCAGGCTTTGGAGGCCTTGTAATTGTGGACGAAGCGCACCACC
TCAAGGAAGGCGGCAGTTACGACGACGTGTTGACGGCTTTCGGGCTTGGC
TCAGCGCAGGCACTGCGGCGCCACCGGCGCGAGCAGCACGGGCCGGCGAC
CTGTGACGGCGCGAACAGCGCGCTCCGGACGGAAATGTATGGCACCGCGC
CCCGCGTCCTTGCCGGATTCACGGCGACGCCGTACCGGGGCGATGGGAGC
TCGCTGCGCCCGTTTTTCGACGCGATCGTCCCCGAGCGCGGTCTCAGATG
GGGAGTAGCCAACGGGTTTCTCTGTGATATCGTGGCATATTCTGTCAAAA
CTGTCACGGATCTGAGTCTCATTCCCACCAGAGCAGGCGAGTTTGCCAGC
GGGCCACTTGCAGCTGCTGTGGACAACGATGCCCGCAATGCCGCCGTTGC
ACGTGCCCTGATTGACTTTTCAGGGAACAAGGACGCCATATCGCGGCGCC
CGGGATTGGGGCGCGCGCTCGTGTTCTGCGCCAGCGTTTCTCACGCCCAC
GCCCTTGCGGCGACGTTGGAAGCCCACGGCATCGCAGCGGGCGCCATCGA
CGCATCGACGCCGCCCGAGGCGCGGCGGCGGCTGCTGGCCGGCTTCCGCG
ACGGCGCGCTGGACGCGCTATGTAATGTCGGCGTGCTCACGGAAGGCTTC
GATGCGCCGGCCTGCGACACGGTGGTGATGTGCCGGCCTGTGCTGTCCAA
GGCGCTCTATATGCAGATGCTGGGGCGCGGCACGCGGCCGATCGTCAACG
TCAACGGCGCCGGCCTTGACATCGCCAGCCGGGCGGCGCTCATTGCGCGT
TCCGTCAAACCGCACATGAAGCTCATCGATTTTGTAGACAATTGCGGGCG
GCACAAGGTGGTGGACATGGCGGACGTTGTCGGGCTGGCCCGCGGCTTC
back to top