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Homology
BLAST of mRNA_P-wetherbeei_contig8252.1.1 vs. uniprot
Match: D7FJC2_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC2_ECTSI) HSP 1 Score: 110 bits (275), Expect = 2.090e-24 Identity = 77/208 (37.02%), Postives = 109/208 (52.40%), Query Frame = 2
Query: 14 MLRRLLPDAQPLSD----WLESATSAASGKSPSQFSLPG------------DSEDYESLLQDTLVASSPDPRCS-----RGLQPPITSLRQLSTMHDLRDRVIKHLVNSAGTASDRQFLDSSGGGGAAS------NVFALGYRRARIHAPCQMLGVEGIECVCPNTLHNIFAEQSWKTLLSRVGDDVMFRLLRWHMVLLRLPNRCYVQ 556
ML+ + P+A L WL++ +AA+ S S ++ G D +Y+ +L++TLVA P P + P SL+ S+M DL DRV++ L+ S+ +S GG AA NV +LG R A A ++L V+G+ C PNT N+ W+ LLSR+GDD+MF LLR H VL RLPNRCY+Q
Sbjct: 23 MLKLIYPNAVNLDSYLEVWLQAVAAAAAPGSASLAAIEGCGGPASYLSRQDDGPEYKKMLKETLVAFHPSPVQAVPGEAHAPLPRHASLQHRSSMADLLDRVVQSLLRSSTVGGQG---NSVGGYYAAQGDDPRRNVLSLGCRVAGPQATSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFALLRQHAVLQRLPNRCYMQ 227
BLAST of mRNA_P-wetherbeei_contig8252.1.1 vs. uniprot
Match: D7G237_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G237_ECTSI) HSP 1 Score: 111 bits (278), Expect = 8.090e-23 Identity = 78/213 (36.62%), Postives = 110/213 (51.64%), Query Frame = 2
Query: 14 MLRRLLPDAQPLSD----WLESATSAASGKSPSQFSLPG------------DSEDYESLLQDTLVASSPDPRCS-----RGLQPPITSLRQLSTMHDLRDRVIKHLVNSAGTASDRQFLDSSGGGGAAS------NVFALGYRRARIHAPCQMLGVEGIECVCPNTLHNIFAEQSWKTLLSRVGDDVMFRLLRWHMVLLRLPNRCYVQVAGPA 571
ML+ + P+A L WL++ +AA+ S S ++ G D +Y+ +L++TLVA P P + P SL+ S+M DL DRV++ L+ S+ +S GG AA NV +LG R A A ++L V+G+ C PNT N+ W+ LLSR+GDD+MF LLR H VL RLPNRCY+Q A
Sbjct: 23 MLKLIYPNAVNLDSYLEVWLQAVAAAAAPGSASLAAIEGCGGPASYLSRQDDGPEYKKMLKETLVAFHPSPVQAVPGEAHAPLPRHASLQHRSSMADLLDRVVQSLLRSSTVGGQG---NSVGGYYAAQGDDPRRNVLSLGCRVAGPQATSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFALLRQHAVLQRLPNRCYMQAPAAA 232
BLAST of mRNA_P-wetherbeei_contig8252.1.1 vs. uniprot
Match: D7G4G7_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G7_ECTSI) HSP 1 Score: 108 bits (271), Expect = 7.390e-22 Identity = 78/213 (36.62%), Postives = 109/213 (51.17%), Query Frame = 2
Query: 14 MLRRLLPDAQPLSD----WLESATSAASGKSPSQFSLPG------------DSEDYESLLQDTLVASSPDPRCS-----RGLQPPITSLRQLSTMHDLRDRVIKHLVNSAGTASDRQFLDSSGGGGAAS------NVFALGYRRARIHAPCQMLGVEGIECVCPNTLHNIFAEQSWKTLLSRVGDDVMFRLLRWHMVLLRLPNRCYVQVAGPA 571
ML+ + P+A L WL++ +AA+ S S ++ G D +Y+ +L++TLVA P P + P SL+ S+M DL DRV+K L+ S+ +S GG AA NV +LG R A A ++L V+G+ C PNT N+ W+ LLSR+GDD+MF LLR H VL RLPNR Y+Q A
Sbjct: 23 MLKLIYPNAVNLDSYLGVWLQAVAAAAAPGSASLAAIEGCGGPASYLSRQDDGPEYKKMLKETLVAFHPSPVQAVPGEAHAPLPRHASLQHRSSMADLLDRVVKSLLRSSTVGGQG---NSVGGYYAAQGDDPRRNVLSLGCRVAGPQATSELLSVQGVACTFPNTTVNVIRSPPWELLLSRIGDDLMFALLRQHAVLQRLPNRWYMQAPAAA 232
BLAST of mRNA_P-wetherbeei_contig8252.1.1 vs. uniprot
Match: A0A8J9YY62_BRALA (TERT protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YY62_BRALA) HSP 1 Score: 79.0 bits (193), Expect = 5.400e-12 Identity = 68/211 (32.23%), Postives = 95/211 (45.02%), Query Frame = 2
Query: 14 MLRRLLPDAQPLSDWLESATSAASGKSPSQFSLPGDSEDYESLLQDTLVASSPDPRCSRGLQPPITSLRQLSTMHDLRDRVIKHLVNSAGTASDRQFLDSSGGGGAASNVFALGYRRARIHAPCQMLGVEGIECVCPNTLHNIFAEQSWKTLLSRVGDDVMFRLLRWHMVLLRLPNRCYVQVAGPALPDLARVVRSLEPPVRK--ATTQHA 640
+L++L P L ++LE + P GDS++Y LLQ T V + D R PP S +Q+S ++ R I+ L S G G NV +LGY+ A ++ IE V P+ F + WKTLLSR+GDDVM LL + P CY+Q+AG + L + P+RK ATT A
Sbjct: 17 ILQQLFPRVLTLQEYLEELLADQDEIPP--LLQEGDSQEYIQLLQTTQVGLTVDQRPL----PPQVSFQQVSNQDEVILRTIEKLCKSPG--------------GPGQNVLSLGYKLASFNSRSFSTKAPRIENVHPDAKIRKFQRRVWKTLLSRIGDDVMTHLLSSCSLFQAGPPSCYIQIAGVPVYTLHSDWHKVPAPLRKIKATTASA 207
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 2880.D7G237 |
| Preferred name | TERT |
| PFAMs | RVT_1,Telomerase_RBD |
| Model size | 1218 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K11126 |
| KEGG Pathway | ko05165,ko05166,ko05200,ko05225,ko05226,map05165,map05166,map05200,map05225,map05226 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000049,GO:0000228,GO:0000333,GO:0000723,GO:0000781,GO:0000782,GO:0000783,GO:0000784,GO:0001172,GO:0001221,GO:0001223,GO:0001302,GO:0001666,GO:0003674,GO:0003676,GO:0003677,GO:0003720,GO:0003721,GO:0003723,GO:0003824,GO:0003964,GO:0003968,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005697,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006278,GO:0006355,GO:0006357,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0006997,GO:0007000,GO:0007004,GO:0007005,GO:0007275,GO:0007346,GO:0007399,GO:0007568,GO:0007569,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008285,GO:0009058,GO:0009059,GO:0009295,GO:0009628,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010073,GO:0010449,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010721,GO:0010827,GO:0010828,GO:0010833,GO:0010941,GO:0014013,GO:0014014,GO:0014070,GO:0014910,GO:0014911,GO:0016020,GO:0016043,GO:0016070,GO:0016246,GO:0016441,GO:0016458,GO:0016604,GO:0016605,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0022008,GO:0022603,GO:0022607,GO:0022613,GO:0022616,GO:0022618,GO:0022622,GO:0023051,GO:0023056,GO:0023057,GO:0030111,GO:0030154,GO:0030177,GO:0030334,GO:0030335,GO:0030422,GO:0030880,GO:0031047,GO:0031050,GO:0031056,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031379,GO:0031399,GO:0031647,GO:0031974,GO:0031981,GO:0032092,GO:0032200,GO:0032268,GO:0032501,GO:0032502,GO:0032768,GO:0032770,GO:0032774,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0033554,GO:0034061,GO:0034062,GO:0034502,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034762,GO:0034764,GO:0035194,GO:0035266,GO:0036293,GO:0036294,GO:0040007,GO:0040012,GO:0040017,GO:0040029,GO:0042127,GO:0042162,GO:0042221,GO:0042575,GO:0042592,GO:0042634,GO:0042635,GO:0042645,GO:0042802,GO:0042803,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043331,GO:0043393,GO:0043523,GO:0043524,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045184,GO:0045595,GO:0045596,GO:0045597,GO:0045765,GO:0045766,GO:0045787,GO:0045893,GO:0045931,GO:0045934,GO:0045935,GO:0045944,GO:0046324,GO:0046326,GO:0046483,GO:0046686,GO:0046983,GO:0047485,GO:0048364,GO:0048507,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048660,GO:0048661,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050000,GO:0050767,GO:0050768,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0050999,GO:0051000,GO:0051049,GO:0051050,GO:0051087,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051272,GO:0051276,GO:0051341,GO:0051353,GO:0051640,GO:0051641,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0060147,GO:0060149,GO:0060249,GO:0060251,GO:0060253,GO:0060255,GO:0060284,GO:0060341,GO:0060548,GO:0060966,GO:0060967,GO:0060968,GO:0060969,GO:0061695,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070034,GO:0070198,GO:0070199,GO:0070200,GO:0070482,GO:0070727,GO:0070887,GO:0070918,GO:0070920,GO:0071310,GO:0071359,GO:0071407,GO:0071453,GO:0071456,GO:0071704,GO:0071826,GO:0071840,GO:0071897,GO:0071944,GO:0072091,GO:0072594,GO:0080090,GO:0080134,GO:0080135,GO:0090065,GO:0090068,GO:0090304,GO:0090342,GO:0090344,GO:0090399,GO:0097159,GO:0097659,GO:0097747,GO:0098680,GO:0098687,GO:0098727,GO:0099402,GO:0140097,GO:0140098,GO:1900087,GO:1900180,GO:1900182,GO:1900368,GO:1900369,GO:1901099,GO:1901214,GO:1901215,GO:1901342,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901698,GO:1901699,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902275,GO:1902494,GO:1902680,GO:1902806,GO:1902808,GO:1902893,GO:1902895,GO:1903506,GO:1903508,GO:1903618,GO:1903620,GO:1903704,GO:1903827,GO:1903829,GO:1904018,GO:1904035,GO:1904036,GO:1904173,GO:1904705,GO:1904707,GO:1904749,GO:1904751,GO:1904752,GO:1904754,GO:1904837,GO:1904868,GO:1905323,GO:1990234,GO:1990572,GO:1990904,GO:2000026,GO:2000045,GO:2000112,GO:2000145,GO:2000147,GO:2000351,GO:2000352,GO:2000648,GO:2000772,GO:2000773,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001239,GO:2001240 |
| Exons | 2 |
| Evalue | 1.24e-23 |
| EggNOG OGs | KOG1005@1|root,KOG1005@2759|Eukaryota |
| EC | 2.7.7.49 |
| Description | telomerase RNA reverse transcriptase activity |
| Cds size | 1203 |
| COG category | L |
| BRITE | ko00000,ko00001,ko01000,ko03032 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1683187029.4660034-CDS-P-wetherbeei_contig8252:192..852 | 1683187029.4660034-CDS-P-wetherbeei_contig8252:192..852 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig8252 193..852 - |
| 1683187029.4781544-CDS-P-wetherbeei_contig8252:964..1507 | 1683187029.4781544-CDS-P-wetherbeei_contig8252:964..1507 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig8252 965..1507 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1683187029.4888654-UTR-P-wetherbeei_contig8252:1507..1520 | 1683187029.4888654-UTR-P-wetherbeei_contig8252:1507..1520 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig8252 1508..1520 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8252.1.1 >prot_P-wetherbeei_contig8252.1.1 ID=prot_P-wetherbeei_contig8252.1.1|Name=mRNA_P-wetherbeei_contig8252.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=401bp
MLRRLLPDAQPLSDWLESATSAASGKSPSQFSLPGDSEDYESLLQDTLVA SSPDPRCSRGLQPPITSLRQLSTMHDLRDRVIKHLVNSAGTASDRQFLDS SGGGGAASNVFALGYRRARIHAPCQMLGVEGIECVCPNTLHNIFAEQSWK TLLSRVGDDVMFRLLRWHMVLLRLPNRCYVQVAGPALPDLARVVRSLEPP VRKATTQHAGRNAAAPAGAVLPPPAAAVAAAAATAAAAAAAAAAASVAAA AVGVVVDKAAAPAIATVAKAQEIGAAPQQAASGKARALEVRRGGSARGAV APDGVEWLPRHLIFYHMSRVRKAGLAPSSVVPRLSQVTAERGDDLAVAAR LVRHIFAPASAGQGSGGGCGGSSSAGASVKRRKLGRRLAGGVPAFAALLK R back to topmRNA from alignment at P-wetherbeei_contig8252:193..1520- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig8252.1.1 ID=mRNA_P-wetherbeei_contig8252.1.1|Name=mRNA_P-wetherbeei_contig8252.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1328bp|location=Sequence derived from alignment at P-wetherbeei_contig8252:193..1520- (Phaeothamnion wetherbeei SAG_119_79) CCTTGGCGTACCCATGTTACGCAGGCTCCTTCCTGATGCGCAACCATTAT
CTGACTGGCTGGAGTCGGCCACTAGCGCCGCCAGTGGCAAGTCTCCCTCG
CAGTTTTCGCTCCCTGGAGACAGCGAAGACTATGAATCGCTGCTCCAAGA
CACGCTTGTGGCGAGCAGCCCAGACCCGCGATGTTCTCGAGGCCTGCAGC
CTCCGATCACCTCTCTGCGGCAGCTCTCGACCATGCATGACCTGAGAGAT
CGCGTTATCAAACACCTCGTCAACAGCGCGGGCACTGCTTCGGACAGACA
GTTTTTGGACAGCTCAGGCGGCGGAGGAGCAGCCTCCAACGTCTTTGCTC
TCGGTTATCGGCGGGCCCGGATCCACGCGCCGTGCCAGATGCTCGGCGTT
GAAGGCATCGAGTGCGTCTGCCCCAACACGCTGCACAACATCTTTGCGGA
GCAATCGTGGAAAACGTTGCTGAGCCGCGTCGGCGATGATGTGATGTTCC
GCCTTCTGCGATGGCACATGGTCTTGCTTCGCCTGCCGAACCGCTGTTAC
GTGCAGGTAAGAGTTATCTCAAGCACCTGCGTTCTTGGTCGTCGCTTTTT
TTACCTTCATTCTTGGTCCTCGATTGTTTTCTCACGCTTTGCCATCTTTT
CGAAAGACGCACGAACAGGTTGCAGGACCCGCGCTGCCCGATTTGGCCCG
CGTTGTGCGGTCCCTCGAGCCGCCCGTGAGAAAAGCAACGACACAGCACG
CGGGGAGGAATGCTGCGGCGCCTGCCGGCGCCGTCTTGCCTCCTCCTGCT
GCCGCCGTCGCCGCCGCCGCCGCCACTGCTGCTGCTGCCGCCGCCGCTGC
CGCTGCTGCTTCTGTTGCTGCCGCTGCCGTTGGAGTGGTGGTGGACAAGG
CGGCGGCTCCCGCCATTGCCACTGTAGCGAAGGCACAAGAAATCGGCGCT
GCGCCCCAACAGGCGGCTAGCGGCAAAGCGCGGGCCTTGGAGGTGAGGCG
CGGCGGCTCAGCGAGGGGCGCCGTCGCTCCCGATGGCGTGGAATGGCTCC
CGCGGCACCTCATTTTCTACCACATGTCGCGCGTCCGAAAGGCGGGACTC
GCGCCATCCTCCGTTGTGCCGAGGCTCAGCCAGGTGACGGCAGAAAGGGG
CGACGATCTCGCTGTGGCCGCCCGCCTGGTGCGCCACATCTTTGCGCCGG
CCAGTGCAGGTCAAGGAAGCGGCGGCGGCTGCGGGGGCAGCAGCAGCGCC
GGCGCGAGTGTGAAACGCCGCAAGCTCGGCCGTCGCCTTGCAGGCGGCGT
GCCCGCGTTTGCCGCGCTTTTGAAGAGG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig8252:193..1520- >mRNA_P-wetherbeei_contig8252.1.1 ID=mRNA_P-wetherbeei_contig8252.1.1|Name=mRNA_P-wetherbeei_contig8252.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1203bp|location=Sequence derived from alignment at P-wetherbeei_contig8252:193..1520- (Phaeothamnion wetherbeei SAG_119_79) ATGTTACGCAGGCTCCTTCCTGATGCGCAACCATTATCTGACTGGCTGGA GTCGGCCACTAGCGCCGCCAGTGGCAAGTCTCCCTCGCAGTTTTCGCTCC CTGGAGACAGCGAAGACTATGAATCGCTGCTCCAAGACACGCTTGTGGCG AGCAGCCCAGACCCGCGATGTTCTCGAGGCCTGCAGCCTCCGATCACCTC TCTGCGGCAGCTCTCGACCATGCATGACCTGAGAGATCGCGTTATCAAAC ACCTCGTCAACAGCGCGGGCACTGCTTCGGACAGACAGTTTTTGGACAGC TCAGGCGGCGGAGGAGCAGCCTCCAACGTCTTTGCTCTCGGTTATCGGCG GGCCCGGATCCACGCGCCGTGCCAGATGCTCGGCGTTGAAGGCATCGAGT GCGTCTGCCCCAACACGCTGCACAACATCTTTGCGGAGCAATCGTGGAAA ACGTTGCTGAGCCGCGTCGGCGATGATGTGATGTTCCGCCTTCTGCGATG GCACATGGTCTTGCTTCGCCTGCCGAACCGCTGTTACGTGCAGGTTGCAG GACCCGCGCTGCCCGATTTGGCCCGCGTTGTGCGGTCCCTCGAGCCGCCC GTGAGAAAAGCAACGACACAGCACGCGGGGAGGAATGCTGCGGCGCCTGC CGGCGCCGTCTTGCCTCCTCCTGCTGCCGCCGTCGCCGCCGCCGCCGCCA CTGCTGCTGCTGCCGCCGCCGCTGCCGCTGCTGCTTCTGTTGCTGCCGCT GCCGTTGGAGTGGTGGTGGACAAGGCGGCGGCTCCCGCCATTGCCACTGT AGCGAAGGCACAAGAAATCGGCGCTGCGCCCCAACAGGCGGCTAGCGGCA AAGCGCGGGCCTTGGAGGTGAGGCGCGGCGGCTCAGCGAGGGGCGCCGTC GCTCCCGATGGCGTGGAATGGCTCCCGCGGCACCTCATTTTCTACCACAT GTCGCGCGTCCGAAAGGCGGGACTCGCGCCATCCTCCGTTGTGCCGAGGC TCAGCCAGGTGACGGCAGAAAGGGGCGACGATCTCGCTGTGGCCGCCCGC CTGGTGCGCCACATCTTTGCGCCGGCCAGTGCAGGTCAAGGAAGCGGCGG CGGCTGCGGGGGCAGCAGCAGCGCCGGCGCGAGTGTGAAACGCCGCAAGC TCGGCCGTCGCCTTGCAGGCGGCGTGCCCGCGTTTGCCGCGCTTTTGAAG AGG back to top
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